Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:47:26 (1177558): wrapper (7.7.26015): starting
14:47:26 (1177558): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 14:47:26] Arguments: --nthreads 4
[2025-06-04 14:47:26] Threads: 4
[2025-06-04 14:47:26] Checking for CVMFS
[2025-06-04 14:47:26] No cvmfs_config command found, will try listing directly
[2025-06-04 14:47:26] CVMFS is ok
[2025-06-04 14:47:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 14:47:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 14:47:26] Further information can be found at the LHC@home message board.
[2025-06-04 14:47:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:47:26] Checking for apptainer binary...
[2025-06-04 14:47:26] which: no apptainer in ((null))
[2025-06-04 14:47:26] apptainer is not installed, using version from CVMFS
[2025-06-04 14:47:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:47:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-06-04 14:47:26] apptainer works
[2025-06-04 14:47:26] Set ATHENA_PROC_NUMBER=4
[2025-06-04 14:47:26] Set ATHENA_CORE_NUMBER=4
[2025-06-04 14:47:26] Starting ATLAS job with PandaID=6677455834
[2025-06-04 14:47:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:34:40]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:34:40] 2025-06-04 15:33:57,560 | WARNING  | process 1188216 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 17:34:40] 2025-06-04 15:33:57,561 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6677455834/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:34:40] 2025-06-04 15:33:57,912 | INFO     | number of running child processes to parent process 1188216: 1
[2025-06-04 17:34:40] 2025-06-04 15:33:57,912 | INFO     | maximum number of monitored processes: 6
[2025-06-04 17:34:40] 2025-06-04 15:34:00,414 | INFO     | monitor loop #726: job 0:6677455834 is in state 'finished'
[2025-06-04 17:34:40] 2025-06-04 15:34:00,415 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:34:40] 2025-06-04 15:34:02,437 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 17:34:40] 2025-06-04 15:34:02,437 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6677455834/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:34:40] 2025-06-04 15:34:02,438 | INFO     | extracted standard info from prmon json
[2025-06-04 17:34:40] 2025-06-04 15:34:02,438 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:34:40] 2025-06-04 15:34:02,438 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:34:40] 2025-06-04 15:34:02,439 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:34:40] 2025-06-04 15:34:02,439 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:34:40] 2025-06-04 15:34:02,442 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:34:40] 2025-06-04 15:34:02,443 | INFO     | sum of square deviations: 1342841922.0
[2025-06-04 17:34:40] 2025-06-04 15:34:02,444 | INFO     | sum of deviations: 15903618843.000002
[2025-06-04 17:34:40] 2025-06-04 15:34:02,444 | INFO     | mean x: 1749046229.0
[2025-06-04 17:34:40] 2025-06-04 15:34:02,445 | INFO     | mean y: 2317222.1226993864
[2025-06-04 17:34:40] 2025-06-04 15:34:02,445 | INFO     | -- intersect: -20712082670.43777
[2025-06-04 17:34:40] 2025-06-04 15:34:02,445 | INFO     | intersect: -20712082670.43777
[2025-06-04 17:34:40] 2025-06-04 15:34:02,445 | INFO     | chi2: 1.7078450253512047
[2025-06-04 17:34:40] 2025-06-04 15:34:02,445 | INFO     | sum of square deviations: 1223016419.5
[2025-06-04 17:34:40] 2025-06-04 15:34:02,446 | INFO     | sum of deviations: 15420569114.999998
[2025-06-04 17:34:40] 2025-06-04 15:34:02,446 | INFO     | mean x: 1749046076.5
[2025-06-04 17:34:40] 2025-06-04 15:34:02,447 | INFO     | mean y: 2316607.341772152
[2025-06-04 17:34:40] 2025-06-04 15:34:02,447 | INFO     | -- intersect: -22050769089.58972
[2025-06-04 17:34:40] 2025-06-04 15:34:02,447 | INFO     | intersect: -22050769089.58972
[2025-06-04 17:34:40] 2025-06-04 15:34:02,447 | INFO     | chi2: 1.7097495534935316
[2025-06-04 17:34:40] 2025-06-04 15:34:02,447 | INFO     | current chi2=1.7097495534935316 (change=-0.11151644991530996 %)
[2025-06-04 17:34:40] 2025-06-04 15:34:02,447 | INFO     | right removable region: 157
[2025-06-04 17:34:40] 2025-06-04 15:34:02,447 | INFO     | sum of square deviations: 1223016419.5
[2025-06-04 17:34:40] 2025-06-04 15:34:02,448 | INFO     | sum of deviations: -10399490724.500002
[2025-06-04 17:34:40] 2025-06-04 15:34:02,448 | INFO     | mean x: 1749046381.5
[2025-06-04 17:34:40] 2025-06-04 15:34:02,449 | INFO     | mean y: 2350290.158227848
[2025-06-04 17:34:40] 2025-06-04 15:34:02,449 | INFO     | -- intersect: 14874752108.41488
[2025-06-04 17:34:40] 2025-06-04 15:34:02,449 | INFO     | intersect: 14874752108.41488
[2025-06-04 17:34:40] 2025-06-04 15:34:02,449 | INFO     | chi2: 0.03121107883769376
[2025-06-04 17:34:40] 2025-06-04 15:34:02,449 | INFO     | current chi2=0.03121107883769376 (change=98.17248764528412 %)
[2025-06-04 17:34:40] 2025-06-04 15:34:02,449 | INFO     | sum of square deviations: 1110539892.0
[2025-06-04 17:34:40] 2025-06-04 15:34:02,450 | INFO     | sum of deviations: -10424185202.0
[2025-06-04 17:34:40] 2025-06-04 15:34:02,450 | INFO     | mean x: 1749046534.0
[2025-06-04 17:34:40] 2025-06-04 15:34:02,450 | INFO     | mean y: 2350288.294117647
[2025-06-04 17:34:40] 2025-06-04 15:34:02,450 | INFO     | -- intersect: 16419937021.263264
[2025-06-04 17:34:40] 2025-06-04 15:34:02,451 | INFO     | intersect: 16419937021.263264
[2025-06-04 17:34:40] 2025-06-04 15:34:02,451 | INFO     | chi2: 0.025663601854404975
[2025-06-04 17:34:40] 2025-06-04 15:34:02,451 | INFO     | current chi2=0.025663601854404975 (change=17.77406353730097 %)
[2025-06-04 17:34:40] 2025-06-04 15:34:02,451 | INFO     | left removable region: 20
[2025-06-04 17:34:40] 2025-06-04 15:34:02,451 | INFO     | sum of square deviations: 797291228.0
[2025-06-04 17:34:40] 2025-06-04 15:34:02,452 | INFO     | sum of deviations: -6409651982.000001
[2025-06-04 17:34:40] 2025-06-04 15:34:02,452 | INFO     | mean x: 1749046656.0
[2025-06-04 17:34:40] 2025-06-04 15:34:02,452 | INFO     | mean y: 2344910.9197080294
[2025-06-04 17:34:40] 2025-06-04 15:34:02,452 | INFO     | -- intersect: 14063430711.854765
[2025-06-04 17:34:40] 2025-06-04 15:34:02,452 | INFO     | intersect: 14063430711.854765
[2025-06-04 17:34:40] 2025-06-04 15:34:02,452 | INFO     | chi2: 0.0209936536451028
[2025-06-04 17:34:40] 2025-06-04 15:34:02,453 | INFO     | -- intersect: 14063430711.854765
[2025-06-04 17:34:40] 2025-06-04 15:34:02,453 | INFO     | current memory leak: -8.04 B/s (using 137 data points, chi2=0.02)
[2025-06-04 17:34:40] 2025-06-04 15:34:02,453 | INFO     | ..............................
[2025-06-04 17:34:40] 2025-06-04 15:34:02,454 | INFO     | . Timing measurements:
[2025-06-04 17:34:40] 2025-06-04 15:34:02,454 | INFO     | . get job = 0 s
[2025-06-04 17:34:40] 2025-06-04 15:34:02,454 | INFO     | . initial setup = 1 s
[2025-06-04 17:34:40] 2025-06-04 15:34:02,454 | INFO     | . payload setup = 8 s
[2025-06-04 17:34:40] 2025-06-04 15:34:02,455 | INFO     | . stage-in = 0 s
[2025-06-04 17:34:40] 2025-06-04 15:34:02,455 | INFO     | . payload execution = 9945 s
[2025-06-04 17:34:40] 2025-06-04 15:34:02,455 | INFO     | . stage-out = 0 s
[2025-06-04 17:34:40] 2025-06-04 15:34:02,455 | INFO     | . log creation = 0 s
[2025-06-04 17:34:40] 2025-06-04 15:34:02,455 | INFO     | ..............................
[2025-06-04 17:34:40] 2025-06-04 15:34:02,556 | INFO     | 
[2025-06-04 17:34:40] 2025-06-04 15:34:02,556 | INFO     | job summary report
[2025-06-04 17:34:40] 2025-06-04 15:34:02,556 | INFO     | --------------------------------------------------
[2025-06-04 17:34:40] 2025-06-04 15:34:02,556 | INFO     | PanDA job id: 6677455834
[2025-06-04 17:34:40] 2025-06-04 15:34:02,556 | INFO     | task id: 45006595
[2025-06-04 17:34:40] 2025-06-04 15:34:02,556 | INFO     | errors: (none)
[2025-06-04 17:34:40] 2025-06-04 15:34:02,556 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:34:40] 2025-06-04 15:34:02,556 | INFO     | pilot state: finished 
[2025-06-04 17:34:40] 2025-06-04 15:34:02,556 | INFO     | transexitcode: 0
[2025-06-04 17:34:40] 2025-06-04 15:34:02,556 | INFO     | exeerrorcode: 0
[2025-06-04 17:34:40] 2025-06-04 15:34:02,556 | INFO     | exeerrordiag: 
[2025-06-04 17:34:40] 2025-06-04 15:34:02,557 | INFO     | exitcode: 0
[2025-06-04 17:34:40] 2025-06-04 15:34:02,557 | INFO     | exitmsg: OK
[2025-06-04 17:34:40] 2025-06-04 15:34:02,557 | INFO     | cpuconsumptiontime: 37994 s
[2025-06-04 17:34:40] 2025-06-04 15:34:02,557 | INFO     | nevents: 400
[2025-06-04 17:34:40] 2025-06-04 15:34:02,557 | INFO     | neventsw: 0
[2025-06-04 17:34:40] 2025-06-04 15:34:02,557 | INFO     | pid: 1188216
[2025-06-04 17:34:40] 2025-06-04 15:34:02,557 | INFO     | pgrp: 1188216
[2025-06-04 17:34:40] 2025-06-04 15:34:02,557 | INFO     | corecount: 4
[2025-06-04 17:34:40] 2025-06-04 15:34:02,557 | INFO     | event service: False
[2025-06-04 17:34:40] 2025-06-04 15:34:02,557 | INFO     | sizes: {0: 2397180, 1: 2397379, 6: 2397585, 11: 2397613, 9957: 2425930, 9958: 2435076, 9960: 2435076, 9968: 2435246}
[2025-06-04 17:34:40] 2025-06-04 15:34:02,557 | INFO     | --------------------------------------------------
[2025-06-04 17:34:40] 2025-06-04 15:34:02,557 | INFO     | 
[2025-06-04 17:34:40] 2025-06-04 15:34:02,558 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2025-06-04 17:34:40] 2025-06-04 15:34:02,579 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:34:40] 2025-06-04 15:34:02,579 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:34:40] 2025-06-04 15:34:02,579 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:34:40] 2025-06-04 15:34:02,579 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:34:40] 2025-06-04 15:34:02,579 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:34:40] 2025-06-04 15:34:02,579 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:34:40] 2025-06-04 15:34:02,580 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:34:40] 2025-06-04 15:34:02,580 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:34:40] 2025-06-04 15:34:02,580 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:34:40] 2025-06-04 15:34:02,580 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:34:40] 2025-06-04 15:34:02,580 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:34:40] 2025-06-04 15:34:02,580 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:34:40] 2025-06-04 15:34:02,580 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:34:40] 2025-06-04 15:34:02,580 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:34:40] 2025-06-04 15:34:02,580 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:34:40] 2025-06-04 15:34:02,580 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:34:40] 2025-06-04 15:34:02,581 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:34:40] 2025-06-04 15:34:02,581 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:34:40] 2025-06-04 15:34:02,581 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:34:40] 2025-06-04 15:34:02,581 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:34:40] 2025-06-04 15:34:02,581 | INFO     | job 6677455834 has completed (purged errors)
[2025-06-04 17:34:40] 2025-06-04 15:34:02,581 | INFO     | overall cleanup function is called
[2025-06-04 17:34:40] 2025-06-04 15:34:03,589 | INFO     | --- collectZombieJob: --- 10, [1188216]
[2025-06-04 17:34:40] 2025-06-04 15:34:03,590 | INFO     | zombie collector waiting for pid 1188216
[2025-06-04 17:34:40] 2025-06-04 15:34:03,590 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:34:40] 2025-06-04 15:34:03,590 | INFO     | collected zombie processes
[2025-06-04 17:34:40] 2025-06-04 15:34:03,590 | INFO     | will attempt to kill all subprocesses of pid=1188216
[2025-06-04 17:34:40] 2025-06-04 15:34:03,944 | INFO     | process IDs to be killed: [1188216] (in reverse order)
[2025-06-04 17:34:40] 2025-06-04 15:34:04,054 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:34:40] 2025-06-04 15:34:04,054 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:34:40] 2025-06-04 15:34:04,066 | INFO     | did not find any defunct processes belonging to 1188216
[2025-06-04 17:34:40] 2025-06-04 15:34:04,078 | INFO     | did not find any defunct processes belonging to 1188216
[2025-06-04 17:34:40] 2025-06-04 15:34:04,079 | INFO     | ready for new job
[2025-06-04 17:34:40] 2025-06-04 15:34:04,079 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:34:40] 2025-06-04 15:34:04,081 | INFO     | **************************************
[2025-06-04 17:34:40] 2025-06-04 15:34:04,081 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:34:40] 2025-06-04 15:34:04,081 | INFO     | **************************************
[2025-06-04 17:34:40] 2025-06-04 15:34:04,081 | INFO     | 
[2025-06-04 17:34:40] 2025-06-04 15:34:04,086 | INFO     | architecture information:
[2025-06-04 17:34:40] 2025-06-04 15:34:04,086 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:34:40] 2025-06-04 15:34:04,102 | INFO     | cat /etc/os-release:
[2025-06-04 17:34:40] NAME="CentOS Linux"
[2025-06-04 17:34:40] VERSION="7 (Core)"
[2025-06-04 17:34:40] ID="centos"
[2025-06-04 17:34:40] ID_LIKE="rhel fedora"
[2025-06-04 17:34:40] VERSION_ID="7"
[2025-06-04 17:34:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:34:40] ANSI_COLOR="0;31"
[2025-06-04 17:34:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:34:40] HOME_URL="https://www.centos.org/"
[2025-06-04 17:34:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:34:40] 
[2025-06-04 17:34:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:34:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:34:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:34:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:34:40] 
[2025-06-04 17:34:40] 2025-06-04 15:34:04,103 | INFO     | **************************************
[2025-06-04 17:34:40] 2025-06-04 15:34:04,606 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2025-06-04 17:34:40] 2025-06-04 15:34:04,623 | INFO     | sufficient remaining disk space (644345757696 B)
[2025-06-04 17:34:40] 2025-06-04 15:34:04,623 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:34:40] 2025-06-04 15:34:04,624 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:34:40] 2025-06-04 15:34:04,624 | INFO     | update_server=False
[2025-06-04 17:34:40] 2025-06-04 15:34:04,624 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:34:40] 2025-06-04 15:34:04,624 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:34:40] 2025-06-04 15:34:04,624 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:34:40] 2025-06-04 15:34:04,624 | INFO     | aborting loop
[2025-06-04 17:34:40] 2025-06-04 15:34:05,335 | INFO     | all data control threads have been joined
[2025-06-04 17:34:40] 2025-06-04 15:34:05,629 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:34:40] 2025-06-04 15:34:05,629 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:34:40] 2025-06-04 15:34:05,660 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:34:40] 2025-06-04 15:34:05,677 | INFO     | PID=1181222 has CPU usage=15.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 17:34:40] 2025-06-04 15:34:05,677 | INFO     | .. there are 6 such processes running
[2025-06-04 17:34:40] 2025-06-04 15:34:05,677 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:34:40] 2025-06-04 15:34:05,677 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:34:40] 2025-06-04 15:34:05,678 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:34:40] 2025-06-04 15:34:05,680 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:34:40] 2025-06-04 15:34:05,703 | INFO     | all payload control threads have been joined
[2025-06-04 17:34:40] 2025-06-04 15:34:06,087 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:34:40] 2025-06-04 15:34:06,168 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:34:40] 2025-06-04 15:34:06,201 | INFO     | [job] validate thread has finished
[2025-06-04 17:34:40] 2025-06-04 15:34:06,319 | INFO     | all job control threads have been joined
[2025-06-04 17:34:40] 2025-06-04 15:34:06,341 | INFO     | [data] control thread has finished
[2025-06-04 17:34:40] 2025-06-04 15:34:06,350 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:34:40] 2025-06-04 15:34:06,385 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:34:40] 2025-06-04 15:34:06,552 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:34:40] 2025-06-04 15:34:06,616 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:34:40] 2025-06-04 15:34:06,630 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:34:40] 2025-06-04 15:34:06,708 | INFO     | [payload] control thread has finished
[2025-06-04 17:34:40] 2025-06-04 15:34:07,325 | INFO     | [job] control thread has finished
[2025-06-04 17:34:40] 2025-06-04 15:34:07,564 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:34:40] 2025-06-04 15:34:08,569 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:34:40] 2025-06-04 15:34:09,666 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:34:40] 2025-06-04 15:34:09,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23069657982784)>', '<ExcThread(monitor, started 23069418551040)>']
[2025-06-04 17:34:40] 2025-06-04 15:34:10,702 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:34:40] 2025-06-04 15:34:10,703 | INFO     | [monitor] control thread has ended
[2025-06-04 17:34:40] 2025-06-04 15:34:14,947 | INFO     | all workflow threads have been joined
[2025-06-04 17:34:40] 2025-06-04 15:34:14,948 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:34:40] 2025-06-04 15:34:14,948 | INFO     | traces error code: 0
[2025-06-04 17:34:40] 2025-06-04 15:34:14,948 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:34:40] 2025-06-04 15:34:15,150 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:34:40] 2025-06-04 15:34:15,153 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:34:40] 2025-06-04 15:34:15,156 [wrapper] pilotpid: 1181222
[2025-06-04 17:34:40] 2025-06-04 15:34:15,159 [wrapper] Pilot exit status: 0
[2025-06-04 17:34:40] 2025-06-04 15:34:15,170 [wrapper] pandaids: 6677455834
[2025-06-04 17:34:40] 2025-06-04 15:34:15,239 [wrapper] cleanup supervisor_pilot 1466882 1181223
[2025-06-04 17:34:40] 2025-06-04 15:34:15,242 [wrapper] Test setup, not cleaning
[2025-06-04 17:34:40] 2025-06-04 15:34:15,245 [wrapper] apfmon messages muted
[2025-06-04 17:34:40] 2025-06-04 15:34:15,248 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:34:40] 2025-06-04 15:34:15,252 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:34:40]  *** Error codes and diagnostics ***
[2025-06-04 17:34:40]     "exeErrorCode": 0,
[2025-06-04 17:34:40]     "exeErrorDiag": "",
[2025-06-04 17:34:40]     "pilotErrorCode": 0,
[2025-06-04 17:34:40]     "pilotErrorDiag": "",
[2025-06-04 17:34:40]  *** Listing of results directory ***
[2025-06-04 17:34:40] total 398240
[2025-06-04 17:34:40] -rw-r--r-- 1 boinc boinc    495897 Jun  3 05:41 pilot3.tar.gz
[2025-06-04 17:34:40] -rw-r--r-- 1 boinc boinc      5111 Jun  3 05:52 queuedata.json
[2025-06-04 17:34:40] -rwx------ 1 boinc boinc     37140 Jun  3 05:52 runpilot2-wrapper.sh
[2025-06-04 17:34:40] -rw-r--r-- 1 boinc boinc       100 Jun  4 14:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:34:40] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 14:47 run_atlas
[2025-06-04 17:34:40] -rw-r--r-- 1 boinc boinc       105 Jun  4 14:47 job.xml
[2025-06-04 17:34:40] -rw-r--r-- 1 boinc boinc      6635 Jun  4 14:47 init_data.xml
[2025-06-04 17:34:40] -rw-r--r-- 2 boinc boinc 219479986 Jun  4 14:47 EVNT.45006593._000749.pool.root.1
[2025-06-04 17:34:40] -rw-r--r-- 2 boinc boinc     15093 Jun  4 14:47 start_atlas.sh
[2025-06-04 17:34:40] drwxrwx--x 2 boinc boinc      4096 Jun  4 14:47 shared
[2025-06-04 17:34:40] -rw-r--r-- 2 boinc boinc    508880 Jun  4 14:47 input.tar.gz
[2025-06-04 17:34:40] -rw-r--r-- 1 boinc boinc         0 Jun  4 14:47 boinc_lockfile
[2025-06-04 17:34:40] -rw-r--r-- 1 boinc boinc      2524 Jun  4 14:47 pandaJob.out
[2025-06-04 17:34:40] -rw------- 1 boinc boinc    986811 Jun  4 14:47 agis_schedconf.cvmfs.json
[2025-06-04 17:34:40] -rw------- 1 boinc boinc   1598969 Jun  4 14:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:34:40] drwx------ 4 boinc boinc      4096 Jun  4 14:47 pilot3
[2025-06-04 17:34:40] -rw-r--r-- 1 boinc boinc       529 Jun  4 17:33 boinc_task_state.xml
[2025-06-04 17:34:40] -rw------- 1 boinc boinc 181982688 Jun  4 17:33 HITS.45006595._018728.pool.root.1
[2025-06-04 17:34:40] -rw------- 1 boinc boinc        95 Jun  4 17:33 pilot_heartbeat.json
[2025-06-04 17:34:40] -rw------- 1 boinc boinc      1034 Jun  4 17:33 memory_monitor_summary.json
[2025-06-04 17:34:40] -rw------- 1 boinc boinc    312564 Jun  4 17:33 log.45006595._018728.job.log.tgz.1
[2025-06-04 17:34:40] -rw------- 1 boinc boinc      7720 Jun  4 17:34 heartbeat.json
[2025-06-04 17:34:40] -rw------- 1 boinc boinc      4758 Jun  4 17:34 pilotlog.txt
[2025-06-04 17:34:40] -rw------- 1 boinc boinc    939908 Jun  4 17:34 log.45006595._018728.job.log.1
[2025-06-04 17:34:40] -rw------- 1 boinc boinc       357 Jun  4 17:34 output.list
[2025-06-04 17:34:40] -rw-r--r-- 1 boinc boinc       620 Jun  4 17:34 runtime_log
[2025-06-04 17:34:40] -rw------- 1 boinc boinc   1269760 Jun  4 17:34 result.tar.gz
[2025-06-04 17:34:40] -rw-r--r-- 1 boinc boinc      9026 Jun  4 17:34 runtime_log.err
[2025-06-04 17:34:40] -rw------- 1 boinc boinc       665 Jun  4 17:34 ltRKDmzsXg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4phKDmgkT2om.diag
[2025-06-04 17:34:40] -rw-r--r-- 1 boinc boinc        26 Jun  4 17:34 wrapper_checkpoint.txt
[2025-06-04 17:34:40] -rw-r--r-- 1 boinc boinc      8192 Jun  4 17:34 boinc_mmap_file
[2025-06-04 17:34:40] -rw-r--r-- 1 boinc boinc     20977 Jun  4 17:34 stderr.txt
[2025-06-04 17:34:40] HITS file was successfully produced:
[2025-06-04 17:34:40] -rw------- 1 boinc boinc 181982688 Jun  4 17:33 shared/HITS.pool.root.1
[2025-06-04 17:34:40]  *** Contents of shared directory: ***
[2025-06-04 17:34:40] total 393820
[2025-06-04 17:34:40] -rw-r--r-- 2 boinc boinc 219479986 Jun  4 14:47 ATLAS.root_0
[2025-06-04 17:34:40] -rw-r--r-- 2 boinc boinc     15093 Jun  4 14:47 start_atlas.sh
[2025-06-04 17:34:40] -rw-r--r-- 2 boinc boinc    508880 Jun  4 14:47 input.tar.gz
[2025-06-04 17:34:40] -rw------- 1 boinc boinc 181982688 Jun  4 17:33 HITS.pool.root.1
[2025-06-04 17:34:40] -rw------- 1 boinc boinc   1269760 Jun  4 17:34 result.tar.gz
17:34:42 (1177558): run_atlas exited; CPU time 38355.515297
17:34:42 (1177558): called boinc_finish(0)

</stderr_txt>
]]>

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