Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:49:31 (11272): wrapper (7.7.26015): starting
12:49:31 (11272): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 12:49:31] Arguments: --nthreads 8
[2025-06-03 12:49:31] Threads: 8
[2025-06-03 12:49:31] Checking for CVMFS
[2025-06-03 12:49:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:49:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:49:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:49:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:49:36] 2.11.2.0 14321 31684 94396 146737 3 52 13810717 25165824 4478 130560 0 16050302 99.834 16622464 1859 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 12:49:36] CVMFS is ok
[2025-06-03 12:49:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:49:36] Checking for apptainer binary...
[2025-06-03 12:49:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:49:36] Running /usr/bin/apptainer --version
[2025-06-03 12:49:36] apptainer version 1.3.2-1.el7
[2025-06-03 12:50:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:54:48] cg-vwn391.simple-grid.lan
[2025-06-03 12:54:48] apptainer works
[2025-06-03 12:54:48] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:54:48] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:54:48] Starting ATLAS job with PandaID=6677391596
[2025-06-03 12:54:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:40:44]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:40:44] 2025-06-03 14:49:32,102 | INFO     | extracted standard info from prmon json
[2025-06-03 17:40:44] 2025-06-03 14:49:32,102 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:40:44] 2025-06-03 14:49:32,102 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:40:44] 2025-06-03 14:49:32,103 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:40:44] 2025-06-03 14:49:32,103 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:40:44] 2025-06-03 14:49:32,108 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:40:44] 2025-06-03 14:49:32,108 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 17:40:44] 2025-06-03 14:49:32,110 | INFO     | sum of deviations: 107826651951.99997
[2025-06-03 17:40:44] 2025-06-03 14:49:32,110 | INFO     | mean x: 1748955446.0
[2025-06-03 17:40:44] 2025-06-03 14:49:32,110 | INFO     | mean y: 2401140.936073059
[2025-06-03 17:40:44] 2025-06-03 14:49:32,110 | INFO     | -- intersect: -57900877230.84266
[2025-06-03 17:40:44] 2025-06-03 14:49:32,111 | INFO     | intersect: -57900877230.84266
[2025-06-03 17:40:44] 2025-06-03 14:49:32,111 | INFO     | chi2: 7.150353348498917
[2025-06-03 17:40:44] 2025-06-03 14:49:32,111 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 17:40:44] 2025-06-03 14:49:32,113 | INFO     | sum of deviations: 119324110376.99998
[2025-06-03 17:40:44] 2025-06-03 14:49:32,113 | INFO     | mean x: 1748955293.5
[2025-06-03 17:40:44] 2025-06-03 14:49:32,113 | INFO     | mean y: 2408995.3644859814
[2025-06-03 17:40:44] 2025-06-03 14:49:32,114 | INFO     | -- intersect: -68672272317.77817
[2025-06-03 17:40:44] 2025-06-03 14:49:32,114 | INFO     | intersect: -68672272317.77817
[2025-06-03 17:40:44] 2025-06-03 14:49:32,114 | INFO     | chi2: 6.439708925059833
[2025-06-03 17:40:44] 2025-06-03 14:49:32,114 | INFO     | current chi2=6.439708925059833 (change=9.938591686357299 %)
[2025-06-03 17:40:44] 2025-06-03 14:49:32,114 | INFO     | right removable region: 213
[2025-06-03 17:40:44] 2025-06-03 14:49:32,115 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 17:40:44] 2025-06-03 14:49:32,116 | INFO     | sum of deviations: 32337349523.999992
[2025-06-03 17:40:44] 2025-06-03 14:49:32,116 | INFO     | mean x: 1748955598.5
[2025-06-03 17:40:44] 2025-06-03 14:49:32,117 | INFO     | mean y: 2453907.7943925234
[2025-06-03 17:40:44] 2025-06-03 14:49:32,117 | INFO     | -- intersect: -18608684724.066772
[2025-06-03 17:40:44] 2025-06-03 14:49:32,117 | INFO     | intersect: -18608684724.066772
[2025-06-03 17:40:44] 2025-06-03 14:49:32,117 | INFO     | chi2: 2.221421866666802
[2025-06-03 17:40:44] 2025-06-03 14:49:32,117 | INFO     | current chi2=2.221421866666802 (change=68.93269803046658 %)
[2025-06-03 17:40:44] 2025-06-03 14:49:32,118 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 17:40:44] 2025-06-03 14:49:32,119 | INFO     | sum of deviations: -4902681508.0
[2025-06-03 17:40:44] 2025-06-03 14:49:32,119 | INFO     | mean x: 1748955751.0
[2025-06-03 17:40:44] 2025-06-03 14:49:32,120 | INFO     | mean y: 2481014.4545454546
[2025-06-03 17:40:44] 2025-06-03 14:49:32,120 | INFO     | -- intersect: 3031522094.1467004
[2025-06-03 17:40:44] 2025-06-03 14:49:32,120 | INFO     | intersect: 3031522094.1467004
[2025-06-03 17:40:44] 2025-06-03 14:49:32,120 | INFO     | chi2: 0.8168457141544259
[2025-06-03 17:40:44] 2025-06-03 14:49:32,120 | INFO     | current chi2=0.8168457141544259 (change=63.22869931139707 %)
[2025-06-03 17:40:44] 2025-06-03 14:49:32,121 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 17:40:44] 2025-06-03 14:49:32,122 | INFO     | sum of deviations: -4327624839.499998
[2025-06-03 17:40:44] 2025-06-03 14:49:32,123 | INFO     | mean x: 1748955903.5
[2025-06-03 17:40:44] 2025-06-03 14:49:32,123 | INFO     | mean y: 2480520.112745098
[2025-06-03 17:40:44] 2025-06-03 14:49:32,123 | INFO     | -- intersect: 2877693194.680851
[2025-06-03 17:40:44] 2025-06-03 14:49:32,123 | INFO     | intersect: 2877693194.680851
[2025-06-03 17:40:44] 2025-06-03 14:49:32,123 | INFO     | chi2: 0.7944501741843789
[2025-06-03 17:40:44] 2025-06-03 14:49:32,123 | INFO     | current chi2=0.7944501741843789 (change=2.741709919263045 %)
[2025-06-03 17:40:44] 2025-06-03 14:49:32,123 | INFO     | left removable region: 30
[2025-06-03 17:40:44] 2025-06-03 14:49:32,124 | INFO     | sum of square deviations: 1900284932.0
[2025-06-03 17:40:44] 2025-06-03 14:49:32,125 | INFO     | sum of deviations: 5303865881.000004
[2025-06-03 17:40:44] 2025-06-03 14:49:32,125 | INFO     | mean x: 1748956178.0
[2025-06-03 17:40:44] 2025-06-03 14:49:32,125 | INFO     | mean y: 2493950.5901639345
[2025-06-03 17:40:44] 2025-06-03 14:49:32,125 | INFO     | -- intersect: -4878999789.454062
[2025-06-03 17:40:44] 2025-06-03 14:49:32,126 | INFO     | intersect: -4878999789.454062
[2025-06-03 17:40:44] 2025-06-03 14:49:32,126 | INFO     | chi2: 0.0003780927312698448
[2025-06-03 17:40:44] 2025-06-03 14:49:32,126 | INFO     | -- intersect: -4878999789.454062
[2025-06-03 17:40:44] 2025-06-03 14:49:32,126 | INFO     | current memory leak: 2.79 B/s (using 183 data points, chi2=0.00)
[2025-06-03 17:40:44] 2025-06-03 14:49:32,127 | INFO     | ..............................
[2025-06-03 17:40:44] 2025-06-03 14:49:32,127 | INFO     | . Timing measurements:
[2025-06-03 17:40:44] 2025-06-03 14:49:32,127 | INFO     | . get job = 0 s
[2025-06-03 17:40:44] 2025-06-03 14:49:32,127 | INFO     | . initial setup = 3 s
[2025-06-03 17:40:44] 2025-06-03 14:49:32,127 | INFO     | . payload setup = 158 s
[2025-06-03 17:40:44] 2025-06-03 14:49:32,127 | INFO     | . stage-in = 0 s
[2025-06-03 17:40:44] 2025-06-03 14:49:32,127 | INFO     | . payload execution = 13451 s
[2025-06-03 17:40:44] 2025-06-03 14:49:32,128 | INFO     | . stage-out = 2 s
[2025-06-03 17:40:44] 2025-06-03 14:49:32,128 | INFO     | . log creation = 0 s
[2025-06-03 17:40:44] 2025-06-03 14:49:32,128 | INFO     | ..............................
[2025-06-03 17:40:44] 2025-06-03 14:49:32,466 | INFO     | 
[2025-06-03 17:40:44] 2025-06-03 14:49:32,466 | INFO     | job summary report
[2025-06-03 17:40:44] 2025-06-03 14:49:32,466 | INFO     | --------------------------------------------------
[2025-06-03 17:40:44] 2025-06-03 14:49:32,466 | INFO     | PanDA job id: 6677391596
[2025-06-03 17:40:44] 2025-06-03 14:49:32,466 | INFO     | task id: 45006595
[2025-06-03 17:40:44] 2025-06-03 14:49:32,467 | INFO     | errors: (none)
[2025-06-03 17:40:44] 2025-06-03 14:49:32,467 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:40:44] 2025-06-03 14:49:32,467 | INFO     | pilot state: finished 
[2025-06-03 17:40:44] 2025-06-03 14:49:32,467 | INFO     | transexitcode: 0
[2025-06-03 17:40:44] 2025-06-03 14:49:32,467 | INFO     | exeerrorcode: 0
[2025-06-03 17:40:44] 2025-06-03 14:49:32,467 | INFO     | exeerrordiag: 
[2025-06-03 17:40:44] 2025-06-03 14:49:32,467 | INFO     | exitcode: 0
[2025-06-03 17:40:44] 2025-06-03 14:49:32,467 | INFO     | exitmsg: OK
[2025-06-03 17:40:44] 2025-06-03 14:49:32,467 | INFO     | cpuconsumptiontime: 48033 s
[2025-06-03 17:40:44] 2025-06-03 14:49:32,468 | INFO     | nevents: 400
[2025-06-03 17:40:44] 2025-06-03 14:49:32,468 | INFO     | neventsw: 0
[2025-06-03 17:40:44] 2025-06-03 14:49:32,468 | INFO     | pid: 30708
[2025-06-03 17:40:44] 2025-06-03 14:49:32,468 | INFO     | pgrp: 30708
[2025-06-03 17:40:44] 2025-06-03 14:49:32,468 | INFO     | corecount: 8
[2025-06-03 17:40:44] 2025-06-03 14:49:32,468 | INFO     | event service: False
[2025-06-03 17:40:44] 2025-06-03 14:49:32,468 | INFO     | sizes: {0: 2404347, 1: 2405033, 2: 2405232, 13: 2405232, 23: 2405288, 34: 2405316, 45: 2405472, 56: 2405500, 66: 2405528, 77: 2405556, 88: 2405612, 90: 2406126, 99
[2025-06-03 17:40:44] 2025-06-03 14:49:32,468 | INFO     | --------------------------------------------------
[2025-06-03 17:40:44] 2025-06-03 14:49:32,468 | INFO     | 
[2025-06-03 17:40:44] 2025-06-03 14:49:32,469 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-06-03 17:40:44] 2025-06-03 14:49:33,067 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:40:44] 2025-06-03 14:49:33,067 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:40:44] 2025-06-03 14:49:33,067 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:40:44] 2025-06-03 14:49:33,067 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:40:44] 2025-06-03 14:49:33,067 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:40:44] 2025-06-03 14:49:33,067 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:40:44] 2025-06-03 14:49:33,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:40:44] 2025-06-03 14:49:33,068 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:40:44] 2025-06-03 14:49:33,068 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:40:44] 2025-06-03 14:49:33,068 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:40:44] 2025-06-03 14:49:33,068 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:40:44] 2025-06-03 14:49:33,068 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:40:44] 2025-06-03 14:49:33,068 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:40:44] 2025-06-03 14:49:33,068 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:40:44] 2025-06-03 14:49:33,068 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:40:44] 2025-06-03 14:49:33,069 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:40:44] 2025-06-03 14:49:33,069 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:40:44] 2025-06-03 14:49:33,069 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:40:44] 2025-06-03 14:49:33,069 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:40:44] 2025-06-03 14:49:33,069 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:40:44] 2025-06-03 14:49:33,069 | INFO     | job 6677391596 has completed (purged errors)
[2025-06-03 17:40:44] 2025-06-03 14:49:33,069 | INFO     | overall cleanup function is called
[2025-06-03 17:40:44] 2025-06-03 14:49:34,079 | INFO     | --- collectZombieJob: --- 10, [30708]
[2025-06-03 17:40:44] 2025-06-03 14:49:34,079 | INFO     | zombie collector waiting for pid 30708
[2025-06-03 17:40:44] 2025-06-03 14:49:34,079 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:40:44] 2025-06-03 14:49:34,079 | INFO     | collected zombie processes
[2025-06-03 17:40:44] 2025-06-03 14:49:34,079 | INFO     | will attempt to kill all subprocesses of pid=30708
[2025-06-03 17:40:44] 2025-06-03 14:49:34,215 | INFO     | process IDs to be killed: [30708] (in reverse order)
[2025-06-03 17:40:44] 2025-06-03 14:49:34,364 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:40:44] 2025-06-03 14:49:34,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:40:44] 2025-06-03 14:49:34,369 | INFO     | did not find any defunct processes belonging to 30708
[2025-06-03 17:40:44] 2025-06-03 14:49:34,372 | INFO     | did not find any defunct processes belonging to 30708
[2025-06-03 17:40:44] 2025-06-03 14:49:34,372 | INFO     | ready for new job
[2025-06-03 17:40:44] 2025-06-03 14:49:34,372 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:40:44] 2025-06-03 14:49:34,379 | INFO     | **************************************
[2025-06-03 17:40:44] 2025-06-03 14:49:34,380 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:40:44] 2025-06-03 14:49:34,380 | INFO     | **************************************
[2025-06-03 17:40:44] 2025-06-03 14:49:34,380 | INFO     | 
[2025-06-03 17:40:44] 2025-06-03 14:49:34,381 | INFO     | pilot is running in a VM
[2025-06-03 17:40:44] 2025-06-03 14:49:34,381 | INFO     | architecture information:
[2025-06-03 17:40:44] 2025-06-03 14:49:34,389 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:40:44] 2025-06-03 14:49:34,554 | INFO     | cat /etc/os-release:
[2025-06-03 17:40:44] NAME="CentOS Linux"
[2025-06-03 17:40:44] VERSION="7 (Core)"
[2025-06-03 17:40:44] ID="centos"
[2025-06-03 17:40:44] ID_LIKE="rhel fedora"
[2025-06-03 17:40:44] VERSION_ID="7"
[2025-06-03 17:40:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:40:44] ANSI_COLOR="0;31"
[2025-06-03 17:40:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:40:44] HOME_URL="https://www.centos.org/"
[2025-06-03 17:40:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:40:44] 
[2025-06-03 17:40:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:40:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:40:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:40:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:40:44] 
[2025-06-03 17:40:44] 2025-06-03 14:49:34,555 | INFO     | **************************************
[2025-06-03 17:40:44] 2025-06-03 14:49:35,058 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-06-03 17:40:44] 2025-06-03 14:49:35,197 | INFO     | sufficient remaining disk space (496766025728 B)
[2025-06-03 17:40:44] 2025-06-03 14:49:35,197 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:40:44] 2025-06-03 14:49:35,198 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:40:44] 2025-06-03 14:49:35,198 | INFO     | update_server=False
[2025-06-03 17:40:44] 2025-06-03 14:49:35,198 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:40:44] 2025-06-03 14:49:35,199 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 17:40:44] 2025-06-03 14:49:35,199 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:40:44] 2025-06-03 14:49:35,199 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:40:44] 2025-06-03 14:49:35,199 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:40:44] 2025-06-03 14:49:35,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:40:44] 2025-06-03 14:49:35,206 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:40:44] 2025-06-03 14:49:35,206 | INFO     | aborting loop
[2025-06-03 17:40:44] 2025-06-03 14:49:35,757 | INFO     | all data control threads have been joined
[2025-06-03 17:40:44] 2025-06-03 14:49:36,021 | INFO     | all job control threads have been joined
[2025-06-03 17:40:44] 2025-06-03 14:49:36,204 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:40:44] 2025-06-03 14:49:36,211 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:40:44] 2025-06-03 14:49:36,393 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:40:44] 2025-06-03 14:49:36,559 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:40:44] 2025-06-03 14:49:36,693 | INFO     | all payload control threads have been joined
[2025-06-03 17:40:44] 2025-06-03 14:49:36,747 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:40:44] 2025-06-03 14:49:36,762 | INFO     | [data] control thread has finished
[2025-06-03 17:40:44] 2025-06-03 14:49:37,015 | INFO     | [job] validate thread has finished
[2025-06-03 17:40:44] 2025-06-03 14:49:37,027 | INFO     | [job] control thread has finished
[2025-06-03 17:40:44] 2025-06-03 14:49:37,174 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:40:44] 2025-06-03 14:49:37,208 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:40:44] 2025-06-03 14:49:37,322 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:40:44] 2025-06-03 14:49:37,344 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:40:44] 2025-06-03 14:49:37,352 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:40:44] 2025-06-03 14:49:37,653 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:40:44] 2025-06-03 14:49:37,699 | INFO     | [payload] control thread has finished
[2025-06-03 17:40:44] 2025-06-03 14:49:38,358 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:40:44] 2025-06-03 14:49:38,468 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:40:44] 2025-06-03 14:49:42,477 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:40:44] 2025-06-03 14:49:44,317 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140492377675584)>', '<ExcThread(monitor, started 140492150777600)>']
[2025-06-03 17:40:44] 2025-06-03 14:49:45,260 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:40:44] 2025-06-03 14:49:45,260 | INFO     | [monitor] control thread has ended
[2025-06-03 17:40:44] 2025-06-03 14:49:49,343 | INFO     | all workflow threads have been joined
[2025-06-03 17:40:44] 2025-06-03 14:49:49,343 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:40:44] 2025-06-03 14:49:49,343 | INFO     | traces error code: 0
[2025-06-03 17:40:44] 2025-06-03 14:49:49,344 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:40:44] 2025-06-03 14:49:49,667 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:40:44] 2025-06-03 14:49:49,779 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:40:44] 2025-06-03 14:49:49,901 [wrapper] pilotpid: 19406
[2025-06-03 17:40:44] 2025-06-03 14:49:50,006 [wrapper] Pilot exit status: 0
[2025-06-03 17:40:44] 2025-06-03 14:49:50,293 [wrapper] pandaids: 6677391596
[2025-06-03 17:40:44] 2025-06-03 14:49:50,406 [wrapper] cleanup supervisor_pilot  2823 19407
[2025-06-03 17:40:44] 2025-06-03 14:49:50,463 [wrapper] Test setup, not cleaning
[2025-06-03 17:40:44] 2025-06-03 14:49:50,564 [wrapper] apfmon messages muted
[2025-06-03 17:40:44] 2025-06-03 14:49:50,664 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:40:44] 2025-06-03 14:49:50,750 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:40:44]  *** Error codes and diagnostics ***
[2025-06-03 17:40:44]     "exeErrorCode": 0,
[2025-06-03 17:40:44]     "exeErrorDiag": "",
[2025-06-03 17:40:44]     "pilotErrorCode": 0,
[2025-06-03 17:40:44]     "pilotErrorDiag": "",
[2025-06-03 17:40:44]  *** Listing of results directory ***
[2025-06-03 17:40:44] total 389632
[2025-06-03 17:40:44] -rw-r--r--. 1 boinc boinc    495897 Jun  2 20:02 pilot3.tar.gz
[2025-06-03 17:40:44] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:22 queuedata.json
[2025-06-03 17:40:44] -rwx------. 1 boinc boinc     37140 Jun  2 20:24 runpilot2-wrapper.sh
[2025-06-03 17:40:44] -rw-r--r--. 1 boinc boinc       100 Jun  3 12:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:40:44] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 12:49 run_atlas
[2025-06-03 17:40:44] -rw-r--r--. 1 boinc boinc       105 Jun  3 12:49 job.xml
[2025-06-03 17:40:44] -rw-r--r--. 2 boinc boinc 215869315 Jun  3 12:49 EVNT.45006593._000292.pool.root.1
[2025-06-03 17:40:44] drwxrwx--x. 2 boinc boinc        68 Jun  3 12:49 shared
[2025-06-03 17:40:44] -rw-r--r--. 2 boinc boinc    508877 Jun  3 12:49 input.tar.gz
[2025-06-03 17:40:44] -rw-r--r--. 1 boinc boinc      6393 Jun  3 12:49 init_data.xml
[2025-06-03 17:40:44] -rw-r--r--. 2 boinc boinc     15093 Jun  3 12:49 start_atlas.sh
[2025-06-03 17:40:44] -rw-r--r--. 1 boinc boinc         0 Jun  3 12:49 boinc_lockfile
[2025-06-03 17:40:44] -rw-r--r--. 1 boinc boinc      2520 Jun  3 12:54 pandaJob.out
[2025-06-03 17:40:44] -rw-------. 1 boinc boinc    985490 Jun  3 12:58 agis_schedconf.cvmfs.json
[2025-06-03 17:40:44] drwx------. 4 boinc boinc      4096 Jun  3 12:58 pilot3
[2025-06-03 17:40:44] -rw-------. 1 boinc boinc 176153888 Jun  3 16:47 HITS.45006595._007280.pool.root.1
[2025-06-03 17:40:44] -rw-r--r--. 1 boinc boinc       531 Jun  3 16:47 boinc_task_state.xml
[2025-06-03 17:40:44] -rw-------. 1 boinc boinc      1019 Jun  3 16:48 memory_monitor_summary.json
[2025-06-03 17:40:44] -rw-------. 1 boinc boinc   1603667 Jun  3 16:48 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:40:44] -rw-------. 1 boinc boinc    371330 Jun  3 16:48 log.45006595._007280.job.log.tgz.1
[2025-06-03 17:40:44] -rw-------. 1 boinc boinc        95 Jun  3 16:48 pilot_heartbeat.json
[2025-06-03 17:40:44] -rw-------. 1 boinc boinc      7691 Jun  3 16:49 heartbeat.json
[2025-06-03 17:40:44] -rw-------. 1 boinc boinc      4540 Jun  3 16:49 pilotlog.txt
[2025-06-03 17:40:44] -rw-------. 1 boinc boinc   1194460 Jun  3 16:49 log.45006595._007280.job.log.1
[2025-06-03 17:40:44] -rw-------. 1 boinc boinc       357 Jun  3 16:49 output.list
[2025-06-03 17:40:44] -rw-r--r--. 1 boinc boinc       620 Jun  3 16:49 runtime_log
[2025-06-03 17:40:44] -rw-------. 1 boinc boinc   1587200 Jun  3 16:49 result.tar.gz
[2025-06-03 17:40:44] -rw-r--r--. 1 boinc boinc      8673 Jun  3 16:49 runtime_log.err
[2025-06-03 17:40:44] -rw-------. 1 boinc boinc       656 Jun  3 16:49 qNdKDma0Og7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmazfKDm3ZCeGm.diag
[2025-06-03 17:40:44] -rw-r--r--. 1 boinc boinc      8192 Jun  3 17:40 boinc_mmap_file
[2025-06-03 17:40:44] -rw-r--r--. 1 boinc boinc        28 Jun  3 17:40 wrapper_checkpoint.txt
[2025-06-03 17:40:44] -rw-r--r--. 1 boinc boinc     20520 Jun  3 17:40 stderr.txt
[2025-06-03 17:40:44] HITS file was successfully produced:
[2025-06-03 17:40:44] -rw-------. 1 boinc boinc 176153888 Jun  3 16:47 shared/HITS.pool.root.1
[2025-06-03 17:40:44]  *** Contents of shared directory: ***
[2025-06-03 17:40:44] total 384908
[2025-06-03 17:40:44] -rw-r--r--. 2 boinc boinc 215869315 Jun  3 12:49 ATLAS.root_0
[2025-06-03 17:40:44] -rw-r--r--. 2 boinc boinc    508877 Jun  3 12:49 input.tar.gz
[2025-06-03 17:40:44] -rw-r--r--. 2 boinc boinc     15093 Jun  3 12:49 start_atlas.sh
[2025-06-03 17:40:44] -rw-------. 1 boinc boinc 176153888 Jun  3 16:47 HITS.pool.root.1
[2025-06-03 17:40:44] -rw-------. 1 boinc boinc   1587200 Jun  3 16:49 result.tar.gz
17:40:46 (11272): run_atlas exited; CPU time 48224.506859
17:40:46 (11272): called boinc_finish(0)

</stderr_txt>
]]>

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