Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:01:45 (30336): wrapper (7.7.26015): starting
23:01:45 (30336): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 23:01:45] Arguments: --nthreads 8
[2025-06-02 23:01:45] Threads: 8
[2025-06-02 23:01:45] Checking for CVMFS
[2025-06-02 23:01:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 23:01:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 23:01:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 23:01:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 23:01:47] 2.11.2.0 14321 30856 94356 146718 1 60 25042125 25165825 4636 130560 0 15626991 99.836 16162752 1833 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 23:01:47] CVMFS is ok
[2025-06-02 23:01:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 23:01:47] Checking for apptainer binary...
[2025-06-02 23:01:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 23:01:47] Running /usr/bin/apptainer --version
[2025-06-02 23:01:47] apptainer version 1.3.2-1.el7
[2025-06-02 23:01:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 23:01:54] cg-vwn391.simple-grid.lan
[2025-06-02 23:01:54] apptainer works
[2025-06-02 23:01:54] Set ATHENA_PROC_NUMBER=8
[2025-06-02 23:01:54] Set ATHENA_CORE_NUMBER=8
[2025-06-02 23:01:54] Starting ATLAS job with PandaID=6677380677
[2025-06-02 23:01:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 05:49:54]  *** The last 200 lines of the pilot log: ***
[2025-06-03 05:49:54] 2025-06-03 00:53:52,730 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 05:49:54] 2025-06-03 00:53:52,731 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 05:49:54] 2025-06-03 00:53:52,731 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 05:49:54] 2025-06-03 00:53:52,735 | INFO     | fitting pss+swap vs Time
[2025-06-03 05:49:54] 2025-06-03 00:53:52,736 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 05:49:54] 2025-06-03 00:53:52,738 | INFO     | sum of deviations: 5392455601.500027
[2025-06-03 05:49:54] 2025-06-03 00:53:52,738 | INFO     | mean x: 1748905364.5
[2025-06-03 05:49:54] 2025-06-03 00:53:52,738 | INFO     | mean y: 2511226.236111111
[2025-06-03 05:49:54] 2025-06-03 00:53:52,738 | INFO     | -- intersect: -3015511592.2913256
[2025-06-03 05:49:54] 2025-06-03 00:53:52,738 | INFO     | intersect: -3015511592.2913256
[2025-06-03 05:49:54] 2025-06-03 00:53:52,739 | INFO     | chi2: 6.161805345016748
[2025-06-03 05:49:54] 2025-06-03 00:53:52,739 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 05:49:54] 2025-06-03 00:53:52,741 | INFO     | sum of deviations: 20703182474.00001
[2025-06-03 05:49:54] 2025-06-03 00:53:52,741 | INFO     | mean x: 1748905212.0
[2025-06-03 05:49:54] 2025-06-03 00:53:52,741 | INFO     | mean y: 2522046.327014218
[2025-06-03 05:49:54] 2025-06-03 00:53:52,741 | INFO     | -- intersect: -12427942150.579721
[2025-06-03 05:49:54] 2025-06-03 00:53:52,741 | INFO     | intersect: -12427942150.579721
[2025-06-03 05:49:54] 2025-06-03 00:53:52,742 | INFO     | chi2: 5.440894301043345
[2025-06-03 05:49:54] 2025-06-03 00:53:52,742 | INFO     | current chi2=5.440894301043345 (change=11.699672475963997 %)
[2025-06-03 05:49:54] 2025-06-03 00:53:52,742 | INFO     | right removable region: 210
[2025-06-03 05:49:54] 2025-06-03 00:53:52,742 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 05:49:54] 2025-06-03 00:53:52,744 | INFO     | sum of deviations: -66695279152.000015
[2025-06-03 05:49:54] 2025-06-03 00:53:52,744 | INFO     | mean x: 1748905517.0
[2025-06-03 05:49:54] 2025-06-03 00:53:52,744 | INFO     | mean y: 2562997.7251184834
[2025-06-03 05:49:54] 2025-06-03 00:53:52,744 | INFO     | -- intersect: 40047296469.27676
[2025-06-03 05:49:54] 2025-06-03 00:53:52,744 | INFO     | intersect: 40047296469.27676
[2025-06-03 05:49:54] 2025-06-03 00:53:52,745 | INFO     | chi2: 1.8478992702042636
[2025-06-03 05:49:54] 2025-06-03 00:53:52,745 | INFO     | current chi2=1.8478992702042636 (change=70.01042443350276 %)
[2025-06-03 05:49:54] 2025-06-03 00:53:52,745 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 05:49:54] 2025-06-03 00:53:52,747 | INFO     | sum of deviations: -92528287797.0
[2025-06-03 05:49:54] 2025-06-03 00:53:52,747 | INFO     | mean x: 1748905669.5
[2025-06-03 05:49:54] 2025-06-03 00:53:52,747 | INFO     | mean y: 2582309.019417476
[2025-06-03 05:49:54] 2025-06-03 00:53:52,747 | INFO     | -- intersect: 59702132722.19176
[2025-06-03 05:49:54] 2025-06-03 00:53:52,747 | INFO     | intersect: 59702132722.19176
[2025-06-03 05:49:54] 2025-06-03 00:53:52,748 | INFO     | chi2: 1.0008742634595698
[2025-06-03 05:49:54] 2025-06-03 00:53:52,748 | INFO     | current chi2=1.0008742634595698 (change=45.83718498092513 %)
[2025-06-03 05:49:54] 2025-06-03 00:53:52,748 | INFO     | sum of square deviations: 2518000700.0
[2025-06-03 05:49:54] 2025-06-03 00:53:52,750 | INFO     | sum of deviations: -90902424114.0
[2025-06-03 05:49:54] 2025-06-03 00:53:52,750 | INFO     | mean x: 1748905822.0
[2025-06-03 05:49:54] 2025-06-03 00:53:52,750 | INFO     | mean y: 2580990.109452736
[2025-06-03 05:49:54] 2025-06-03 00:53:52,750 | INFO     | -- intersect: 63139886220.75843
[2025-06-03 05:49:54] 2025-06-03 00:53:52,750 | INFO     | intersect: 63139886220.75843
[2025-06-03 05:49:54] 2025-06-03 00:53:52,751 | INFO     | chi2: 0.9805392693714888
[2025-06-03 05:49:54] 2025-06-03 00:53:52,751 | INFO     | current chi2=0.9805392693714888 (change=2.031723147500271 %)
[2025-06-03 05:49:54] 2025-06-03 00:53:52,751 | INFO     | left removable region: 30
[2025-06-03 05:49:54] 2025-06-03 00:53:52,752 | INFO     | sum of square deviations: 1808350185.0
[2025-06-03 05:49:54] 2025-06-03 00:53:52,753 | INFO     | sum of deviations: -59568722809.5
[2025-06-03 05:49:54] 2025-06-03 00:53:52,753 | INFO     | mean x: 1748906096.5
[2025-06-03 05:49:54] 2025-06-03 00:53:52,753 | INFO     | mean y: 2581460.816666667
[2025-06-03 05:49:54] 2025-06-03 00:53:52,753 | INFO     | -- intersect: 57613161173.97834
[2025-06-03 05:49:54] 2025-06-03 00:53:52,753 | INFO     | intersect: 57613161173.97834
[2025-06-03 05:49:54] 2025-06-03 00:53:52,754 | INFO     | chi2: 0.17890007897709637
[2025-06-03 05:49:54] 2025-06-03 00:53:52,754 | INFO     | -- intersect: 57613161173.97834
[2025-06-03 05:49:54] 2025-06-03 00:53:52,754 | INFO     | current memory leak: -32.94 B/s (using 180 data points, chi2=0.18)
[2025-06-03 05:49:54] 2025-06-03 00:53:52,755 | INFO     | ..............................
[2025-06-03 05:49:54] 2025-06-03 00:53:52,755 | INFO     | . Timing measurements:
[2025-06-03 05:49:54] 2025-06-03 00:53:52,755 | INFO     | . get job = 0 s
[2025-06-03 05:49:54] 2025-06-03 00:53:52,755 | INFO     | . initial setup = 6 s
[2025-06-03 05:49:54] 2025-06-03 00:53:52,755 | INFO     | . payload setup = 146 s
[2025-06-03 05:49:54] 2025-06-03 00:53:52,755 | INFO     | . stage-in = 0 s
[2025-06-03 05:49:54] 2025-06-03 00:53:52,755 | INFO     | . payload execution = 13300 s
[2025-06-03 05:49:54] 2025-06-03 00:53:52,755 | INFO     | . stage-out = 1 s
[2025-06-03 05:49:54] 2025-06-03 00:53:52,755 | INFO     | . log creation = 0 s
[2025-06-03 05:49:54] 2025-06-03 00:53:52,756 | INFO     | ..............................
[2025-06-03 05:49:54] 2025-06-03 00:53:52,983 | INFO     | 
[2025-06-03 05:49:54] 2025-06-03 00:53:52,983 | INFO     | job summary report
[2025-06-03 05:49:54] 2025-06-03 00:53:52,983 | INFO     | --------------------------------------------------
[2025-06-03 05:49:54] 2025-06-03 00:53:52,983 | INFO     | PanDA job id: 6677380677
[2025-06-03 05:49:54] 2025-06-03 00:53:52,983 | INFO     | task id: 45006595
[2025-06-03 05:49:54] 2025-06-03 00:53:52,983 | INFO     | errors: (none)
[2025-06-03 05:49:54] 2025-06-03 00:53:52,984 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 05:49:54] 2025-06-03 00:53:52,984 | INFO     | pilot state: finished 
[2025-06-03 05:49:54] 2025-06-03 00:53:52,984 | INFO     | transexitcode: 0
[2025-06-03 05:49:54] 2025-06-03 00:53:52,984 | INFO     | exeerrorcode: 0
[2025-06-03 05:49:54] 2025-06-03 00:53:52,984 | INFO     | exeerrordiag: 
[2025-06-03 05:49:54] 2025-06-03 00:53:52,984 | INFO     | exitcode: 0
[2025-06-03 05:49:54] 2025-06-03 00:53:52,984 | INFO     | exitmsg: OK
[2025-06-03 05:49:54] 2025-06-03 00:53:52,984 | INFO     | cpuconsumptiontime: 48945 s
[2025-06-03 05:49:54] 2025-06-03 00:53:52,984 | INFO     | nevents: 400
[2025-06-03 05:49:54] 2025-06-03 00:53:52,984 | INFO     | neventsw: 0
[2025-06-03 05:49:54] 2025-06-03 00:53:52,984 | INFO     | pid: 11557
[2025-06-03 05:49:54] 2025-06-03 00:53:52,984 | INFO     | pgrp: 11557
[2025-06-03 05:49:54] 2025-06-03 00:53:52,984 | INFO     | corecount: 8
[2025-06-03 05:49:54] 2025-06-03 00:53:52,985 | INFO     | event service: False
[2025-06-03 05:49:54] 2025-06-03 00:53:52,985 | INFO     | sizes: {0: 2404348, 1: 2405205, 2: 2405205, 12: 2405233, 23: 2405261, 34: 2405289, 45: 2405445, 55: 2405473, 66: 2405501, 77: 2405529, 88: 2405585, 90: 2406099, 98
[2025-06-03 05:49:54] 2025-06-03 00:53:52,985 | INFO     | --------------------------------------------------
[2025-06-03 05:49:54] 2025-06-03 00:53:52,985 | INFO     | 
[2025-06-03 05:49:54] 2025-06-03 00:53:52,985 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-06-03 05:49:54] 2025-06-03 00:53:53,449 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 05:49:54] 2025-06-03 00:53:53,450 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 05:49:54] 2025-06-03 00:53:53,450 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 05:49:54] 2025-06-03 00:53:53,450 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 05:49:54] 2025-06-03 00:53:53,450 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 05:49:54] 2025-06-03 00:53:53,450 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 05:49:54] 2025-06-03 00:53:53,450 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 05:49:54] 2025-06-03 00:53:53,450 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 05:49:54] 2025-06-03 00:53:53,451 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 05:49:54] 2025-06-03 00:53:53,451 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 05:49:54] 2025-06-03 00:53:53,451 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 05:49:54] 2025-06-03 00:53:53,451 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 05:49:54] 2025-06-03 00:53:53,451 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 05:49:54] 2025-06-03 00:53:53,451 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 05:49:54] 2025-06-03 00:53:53,451 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 05:49:54] 2025-06-03 00:53:53,451 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 05:49:54] 2025-06-03 00:53:53,451 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 05:49:54] 2025-06-03 00:53:53,452 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 05:49:54] 2025-06-03 00:53:53,452 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 05:49:54] 2025-06-03 00:53:53,452 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 05:49:54] 2025-06-03 00:53:53,452 | INFO     | job 6677380677 has completed (purged errors)
[2025-06-03 05:49:54] 2025-06-03 00:53:53,452 | INFO     | overall cleanup function is called
[2025-06-03 05:49:54] 2025-06-03 00:53:54,461 | INFO     | --- collectZombieJob: --- 10, [11557]
[2025-06-03 05:49:54] 2025-06-03 00:53:54,461 | INFO     | zombie collector waiting for pid 11557
[2025-06-03 05:49:54] 2025-06-03 00:53:54,461 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 05:49:54] 2025-06-03 00:53:54,461 | INFO     | collected zombie processes
[2025-06-03 05:49:54] 2025-06-03 00:53:54,461 | INFO     | will attempt to kill all subprocesses of pid=11557
[2025-06-03 05:49:54] 2025-06-03 00:53:54,572 | INFO     | process IDs to be killed: [11557] (in reverse order)
[2025-06-03 05:49:54] 2025-06-03 00:53:55,354 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 05:49:54] 2025-06-03 00:53:55,355 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 05:49:54] 2025-06-03 00:53:55,358 | INFO     | did not find any defunct processes belonging to 11557
[2025-06-03 05:49:54] 2025-06-03 00:53:55,363 | INFO     | did not find any defunct processes belonging to 11557
[2025-06-03 05:49:54] 2025-06-03 00:53:55,363 | INFO     | ready for new job
[2025-06-03 05:49:54] 2025-06-03 00:53:55,364 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 05:49:54] 2025-06-03 00:53:55,366 | INFO     | **************************************
[2025-06-03 05:49:54] 2025-06-03 00:53:55,366 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 05:49:54] 2025-06-03 00:53:55,366 | INFO     | **************************************
[2025-06-03 05:49:54] 2025-06-03 00:53:55,366 | INFO     | 
[2025-06-03 05:49:54] 2025-06-03 00:53:55,367 | INFO     | pilot is running in a VM
[2025-06-03 05:49:54] 2025-06-03 00:53:55,367 | INFO     | architecture information:
[2025-06-03 05:49:54] 2025-06-03 00:53:55,377 | INFO     | executing command: cat /etc/os-release
[2025-06-03 05:49:54] 2025-06-03 00:53:55,562 | INFO     | cat /etc/os-release:
[2025-06-03 05:49:54] NAME="CentOS Linux"
[2025-06-03 05:49:54] VERSION="7 (Core)"
[2025-06-03 05:49:54] ID="centos"
[2025-06-03 05:49:54] ID_LIKE="rhel fedora"
[2025-06-03 05:49:54] VERSION_ID="7"
[2025-06-03 05:49:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 05:49:54] ANSI_COLOR="0;31"
[2025-06-03 05:49:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 05:49:54] HOME_URL="https://www.centos.org/"
[2025-06-03 05:49:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 05:49:54] 
[2025-06-03 05:49:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 05:49:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 05:49:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 05:49:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 05:49:54] 
[2025-06-03 05:49:54] 2025-06-03 00:53:55,562 | INFO     | **************************************
[2025-06-03 05:49:54] 2025-06-03 00:53:56,066 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-06-03 05:49:54] 2025-06-03 00:53:56,298 | INFO     | sufficient remaining disk space (496900243456 B)
[2025-06-03 05:49:54] 2025-06-03 00:53:56,299 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 05:49:54] 2025-06-03 00:53:56,299 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 05:49:54] 2025-06-03 00:53:56,299 | INFO     | update_server=False
[2025-06-03 05:49:54] 2025-06-03 00:53:56,299 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 05:49:54] 2025-06-03 00:53:56,299 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 05:49:54] 2025-06-03 00:53:56,300 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 05:49:54] 2025-06-03 00:53:56,300 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 05:49:54] 2025-06-03 00:53:56,300 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 05:49:54] 2025-06-03 00:53:56,307 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 05:49:54] 2025-06-03 00:53:56,315 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 05:49:54] 2025-06-03 00:53:56,315 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 05:49:54] 2025-06-03 00:53:56,315 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:49:54] 2025-06-03 00:53:56,315 | INFO     | will abort loop
[2025-06-03 05:49:54] 2025-06-03 00:53:56,850 | INFO     | all payload control threads have been joined
[2025-06-03 05:49:54] 2025-06-03 00:53:57,305 | INFO     | [job] retrieve thread has finished
[2025-06-03 05:49:54] 2025-06-03 00:53:57,318 | INFO     | all data control threads have been joined
[2025-06-03 05:49:54] 2025-06-03 00:53:57,321 | INFO     | [job] job monitor thread has finished
[2025-06-03 05:49:54] 2025-06-03 00:53:57,555 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 05:49:54] 2025-06-03 00:53:57,647 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 05:49:54] 2025-06-03 00:53:57,661 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 05:49:54] 2025-06-03 00:53:57,730 | INFO     | [data] copytool_in thread has finished
[2025-06-03 05:49:54] 2025-06-03 00:53:57,856 | INFO     | [payload] control thread has finished
[2025-06-03 05:49:54] 2025-06-03 00:53:57,893 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:49:54] 2025-06-03 00:53:57,903 | INFO     | [payload] failed_post thread has finished
[2025-06-03 05:49:54] 2025-06-03 00:53:57,942 | INFO     | all job control threads have been joined
[2025-06-03 05:49:54] 2025-06-03 00:53:57,998 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 05:49:54] 2025-06-03 00:53:58,314 | INFO     | [data] copytool_out thread has finished
[2025-06-03 05:49:54] 2025-06-03 00:53:58,324 | INFO     | [data] control thread has finished
[2025-06-03 05:49:54] 2025-06-03 00:53:58,361 | INFO     | [payload] validate_post thread has finished
[2025-06-03 05:49:54] 2025-06-03 00:53:58,380 | INFO     | [job] validate thread has finished
[2025-06-03 05:49:54] 2025-06-03 00:53:58,899 | INFO     | [job] queue monitor thread has finished
[2025-06-03 05:49:54] 2025-06-03 00:53:58,948 | INFO     | [job] control thread has finished
[2025-06-03 05:49:54] 2025-06-03 00:53:59,159 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 05:49:54] 2025-06-03 00:54:03,169 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 05:49:54] 2025-06-03 00:54:04,803 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140239148885824)>', '<ExcThread(monitor, started 140238693312256)>']
[2025-06-03 05:49:54] 2025-06-03 00:54:05,352 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 05:49:54] 2025-06-03 00:54:05,352 | INFO     | [monitor] control thread has ended
[2025-06-03 05:49:54] 2025-06-03 00:54:09,829 | INFO     | all workflow threads have been joined
[2025-06-03 05:49:54] 2025-06-03 00:54:09,829 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 05:49:54] 2025-06-03 00:54:09,829 | INFO     | traces error code: 0
[2025-06-03 05:49:54] 2025-06-03 00:54:09,830 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 05:49:54] 2025-06-03 00:54:10,095 [wrapper] ==== pilot stdout END ====
[2025-06-03 05:49:54] 2025-06-03 00:54:10,148 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 05:49:54] 2025-06-03 00:54:10,183 [wrapper] pilotpid: 3262
[2025-06-03 05:49:54] 2025-06-03 00:54:10,215 [wrapper] Pilot exit status: 0
[2025-06-03 05:49:54] 2025-06-03 00:54:10,594 [wrapper] pandaids: 6677380677
[2025-06-03 05:49:54] 2025-06-03 00:54:11,076 [wrapper] cleanup supervisor_pilot 28615 3263
[2025-06-03 05:49:54] 2025-06-03 00:54:11,111 [wrapper] Test setup, not cleaning
[2025-06-03 05:49:54] 2025-06-03 00:54:11,186 [wrapper] apfmon messages muted
[2025-06-03 05:49:54] 2025-06-03 00:54:11,257 [wrapper] ==== wrapper stdout END ====
[2025-06-03 05:49:54] 2025-06-03 00:54:11,357 [wrapper] ==== wrapper stderr END ====
[2025-06-03 05:49:54]  *** Error codes and diagnostics ***
[2025-06-03 05:49:54]     "exeErrorCode": 0,
[2025-06-03 05:49:54]     "exeErrorDiag": "",
[2025-06-03 05:49:54]     "pilotErrorCode": 0,
[2025-06-03 05:49:54]     "pilotErrorDiag": "",
[2025-06-03 05:49:54]  *** Listing of results directory ***
[2025-06-03 05:49:54] total 393676
[2025-06-03 05:49:54] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 05:49:54] -rwx------. 1 boinc boinc     37140 Jun  2 17:51 runpilot2-wrapper.sh
[2025-06-03 05:49:54] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:53 queuedata.json
[2025-06-03 05:49:54] -rw-r--r--. 1 boinc boinc       100 Jun  2 23:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 05:49:54] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 23:01 run_atlas
[2025-06-03 05:49:54] -rw-r--r--. 1 boinc boinc       105 Jun  2 23:01 job.xml
[2025-06-03 05:49:54] -rw-r--r--. 2 boinc boinc 215545773 Jun  2 23:01 EVNT.45006593._000093.pool.root.1
[2025-06-03 05:49:54] -rw-r--r--. 1 boinc boinc      6393 Jun  2 23:01 init_data.xml
[2025-06-03 05:49:54] -rw-r--r--. 2 boinc boinc     15093 Jun  2 23:01 start_atlas.sh
[2025-06-03 05:49:54] drwxrwx--x. 2 boinc boinc        68 Jun  2 23:01 shared
[2025-06-03 05:49:54] -rw-r--r--. 2 boinc boinc    508874 Jun  2 23:01 input.tar.gz
[2025-06-03 05:49:54] -rw-r--r--. 1 boinc boinc         0 Jun  2 23:01 boinc_lockfile
[2025-06-03 05:49:54] -rw-r--r--. 1 boinc boinc      2521 Jun  2 23:01 pandaJob.out
[2025-06-03 05:49:54] -rw-------. 1 boinc boinc    987975 Jun  2 23:05 agis_schedconf.cvmfs.json
[2025-06-03 05:49:54] drwx------. 4 boinc boinc      4096 Jun  2 23:05 pilot3
[2025-06-03 05:49:54] -rw-------. 1 boinc boinc 180661750 Jun  3 02:51 HITS.45006595._002309.pool.root.1
[2025-06-03 05:49:54] -rw-r--r--. 1 boinc boinc       531 Jun  3 02:52 boinc_task_state.xml
[2025-06-03 05:49:54] -rw-------. 1 boinc boinc      1033 Jun  3 02:52 memory_monitor_summary.json
[2025-06-03 05:49:54] -rw-------. 1 boinc boinc   1603667 Jun  3 02:52 agis_ddmendpoints.agis.ALL.json
[2025-06-03 05:49:54] -rw-------. 1 boinc boinc    373518 Jun  3 02:52 log.45006595._002309.job.log.tgz.1
[2025-06-03 05:49:54] -rw-------. 1 boinc boinc        95 Jun  3 02:53 pilot_heartbeat.json
[2025-06-03 05:49:54] -rw-------. 1 boinc boinc      7693 Jun  3 02:53 heartbeat.json
[2025-06-03 05:49:54] -rw-------. 1 boinc boinc      4726 Jun  3 02:54 pilotlog.txt
[2025-06-03 05:49:54] -rw-------. 1 boinc boinc   1171227 Jun  3 02:54 log.45006595._002309.job.log.1
[2025-06-03 05:49:54] -rw-------. 1 boinc boinc       357 Jun  3 02:54 output.list
[2025-06-03 05:49:54] -rw-r--r--. 1 boinc boinc       620 Jun  3 02:54 runtime_log
[2025-06-03 05:49:54] -rw-------. 1 boinc boinc   1566720 Jun  3 02:54 result.tar.gz
[2025-06-03 05:49:54] -rw-r--r--. 1 boinc boinc      8673 Jun  3 02:54 runtime_log.err
[2025-06-03 05:49:54] -rw-------. 1 boinc boinc       656 Jun  3 02:54 ah8MDm2cMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxAfKDmu1Od3m.diag
[2025-06-03 05:49:54] -rw-r--r--. 1 boinc boinc      8192 Jun  3 05:49 boinc_mmap_file
[2025-06-03 05:49:54] -rw-r--r--. 1 boinc boinc        28 Jun  3 05:49 wrapper_checkpoint.txt
[2025-06-03 05:49:54] -rw-r--r--. 1 boinc boinc     20529 Jun  3 05:49 stderr.txt
[2025-06-03 05:49:54] HITS file was successfully produced:
[2025-06-03 05:49:54] -rw-------. 1 boinc boinc 180661750 Jun  3 02:51 shared/HITS.pool.root.1
[2025-06-03 05:49:54]  *** Contents of shared directory: ***
[2025-06-03 05:49:54] total 388972
[2025-06-03 05:49:54] -rw-r--r--. 2 boinc boinc 215545773 Jun  2 23:01 ATLAS.root_0
[2025-06-03 05:49:54] -rw-r--r--. 2 boinc boinc     15093 Jun  2 23:01 start_atlas.sh
[2025-06-03 05:49:54] -rw-r--r--. 2 boinc boinc    508874 Jun  2 23:01 input.tar.gz
[2025-06-03 05:49:54] -rw-------. 1 boinc boinc 180661750 Jun  3 02:51 HITS.pool.root.1
[2025-06-03 05:49:54] -rw-------. 1 boinc boinc   1566720 Jun  3 02:54 result.tar.gz
05:49:56 (30336): run_atlas exited; CPU time 49128.031068
05:49:56 (30336): called boinc_finish(0)

</stderr_txt>
]]>

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