Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:09:00 (3780142): wrapper (7.7.26015): starting
15:09:00 (3780142): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 15:09:00] Arguments: --nthreads 4
[2025-06-04 15:09:00] Threads: 4
[2025-06-04 15:09:00] Checking for CVMFS
[2025-06-04 15:09:00] No cvmfs_config command found, will try listing directly
[2025-06-04 15:09:00] CVMFS is ok
[2025-06-04 15:09:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 15:09:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 15:09:00] Further information can be found at the LHC@home message board.
[2025-06-04 15:09:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:09:00] Checking for apptainer binary...
[2025-06-04 15:09:00] which: no apptainer in ((null))
[2025-06-04 15:09:00] apptainer is not installed, using version from CVMFS
[2025-06-04 15:09:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:09:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-06-04 15:09:00] apptainer works
[2025-06-04 15:09:00] Set ATHENA_PROC_NUMBER=4
[2025-06-04 15:09:00] Set ATHENA_CORE_NUMBER=4
[2025-06-04 15:09:00] Starting ATLAS job with PandaID=6668788502
[2025-06-04 15:09:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:55:47]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:55:47] 2025-06-04 16:53:21,411 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 18:55:47] 2025-06-04 16:53:21,413 | INFO     | sum of deviations: 5922854292.0
[2025-06-04 18:55:47] 2025-06-04 16:53:21,413 | INFO     | mean x: 1749049411.0
[2025-06-04 18:55:47] 2025-06-04 16:53:21,413 | INFO     | mean y: 2341213.1627906975
[2025-06-04 18:55:47] 2025-06-04 16:53:21,413 | INFO     | -- intersect: -3359279560.595359
[2025-06-04 18:55:47] 2025-06-04 16:53:21,413 | INFO     | intersect: -3359279560.595359
[2025-06-04 18:55:47] 2025-06-04 16:53:21,413 | INFO     | chi2: 0.012238425564928553
[2025-06-04 18:55:47] 2025-06-04 16:53:21,414 | INFO     | current chi2=0.012238425564928553 (change=99.26545414929787 %)
[2025-06-04 18:55:47] 2025-06-04 16:53:21,414 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 18:55:47] 2025-06-04 16:53:21,415 | INFO     | sum of deviations: 6336636171.5
[2025-06-04 18:55:47] 2025-06-04 16:53:21,415 | INFO     | mean x: 1749049563.5
[2025-06-04 18:55:47] 2025-06-04 16:53:21,416 | INFO     | mean y: 2340897.6523809526
[2025-06-04 18:55:47] 2025-06-04 16:53:21,416 | INFO     | -- intersect: -3857189167.881318
[2025-06-04 18:55:47] 2025-06-04 16:53:21,416 | INFO     | intersect: -3857189167.881318
[2025-06-04 18:55:47] 2025-06-04 16:53:21,416 | INFO     | chi2: 0.008293345864000837
[2025-06-04 18:55:47] 2025-06-04 16:53:21,416 | INFO     | current chi2=0.008293345864000837 (change=32.23518973088388 %)
[2025-06-04 18:55:47] 2025-06-04 16:53:21,417 | INFO     | sum of square deviations: 2671343110.0
[2025-06-04 18:55:47] 2025-06-04 16:53:21,418 | INFO     | sum of deviations: 8217701803.000002
[2025-06-04 18:55:47] 2025-06-04 16:53:21,418 | INFO     | mean x: 1749049716.0
[2025-06-04 18:55:47] 2025-06-04 16:53:21,418 | INFO     | mean y: 2339464.5268292683
[2025-06-04 18:55:47] 2025-06-04 16:53:21,418 | INFO     | -- intersect: -5378163306.122441
[2025-06-04 18:55:47] 2025-06-04 16:53:21,418 | INFO     | intersect: -5378163306.122441
[2025-06-04 18:55:47] 2025-06-04 16:53:21,419 | INFO     | chi2: 0.002960963390225938
[2025-06-04 18:55:47] 2025-06-04 16:53:21,419 | INFO     | current chi2=0.002960963390225938 (change=64.29711917504036 %)
[2025-06-04 18:55:47] 2025-06-04 16:53:21,419 | INFO     | sum of square deviations: 2480604650.0
[2025-06-04 18:55:47] 2025-06-04 16:53:21,420 | INFO     | sum of deviations: 8479067587.999999
[2025-06-04 18:55:47] 2025-06-04 16:53:21,420 | INFO     | mean x: 1749049868.5
[2025-06-04 18:55:47] 2025-06-04 16:53:21,421 | INFO     | mean y: 2339269.11
[2025-06-04 18:55:47] 2025-06-04 16:53:21,421 | INFO     | -- intersect: -5976167644.4338455
[2025-06-04 18:55:47] 2025-06-04 16:53:21,421 | INFO     | intersect: -5976167644.4338455
[2025-06-04 18:55:47] 2025-06-04 16:53:21,421 | INFO     | chi2: 0.0002740846731155136
[2025-06-04 18:55:47] 2025-06-04 16:53:21,421 | INFO     | current chi2=0.0002740846731155136 (change=90.74339540906652 %)
[2025-06-04 18:55:47] 2025-06-04 16:53:21,421 | INFO     | sum of square deviations: 2299168690.0
[2025-06-04 18:55:47] 2025-06-04 16:53:21,423 | INFO     | sum of deviations: 7693800679.999996
[2025-06-04 18:55:47] 2025-06-04 16:53:21,423 | INFO     | mean x: 1749050021.0
[2025-06-04 18:55:47] 2025-06-04 16:53:21,423 | INFO     | mean y: 2339928.0512820515
[2025-06-04 18:55:47] 2025-06-04 16:53:21,423 | INFO     | -- intersect: -5850576519.294653
[2025-06-04 18:55:47] 2025-06-04 16:53:21,423 | INFO     | intersect: -5850576519.294653
[2025-06-04 18:55:47] 2025-06-04 16:53:21,423 | INFO     | chi2: 0.0002320486422748148
[2025-06-04 18:55:47] 2025-06-04 16:53:21,423 | INFO     | current chi2=0.0002320486422748148 (change=15.336877601682827 %)
[2025-06-04 18:55:47] 2025-06-04 16:53:21,423 | INFO     | left removable region: 50
[2025-06-04 18:55:47] 2025-06-04 16:53:21,424 | INFO     | sum of square deviations: 1367709365.0
[2025-06-04 18:55:47] 2025-06-04 16:53:21,425 | INFO     | sum of deviations: 4639356250.5
[2025-06-04 18:55:47] 2025-06-04 16:53:21,425 | INFO     | mean x: 1749050600.5
[2025-06-04 18:55:47] 2025-06-04 16:53:21,425 | INFO     | mean y: 2341770.4695121953
[2025-06-04 18:55:47] 2025-06-04 16:53:21,425 | INFO     | -- intersect: -5930547952.684833
[2025-06-04 18:55:47] 2025-06-04 16:53:21,425 | INFO     | intersect: -5930547952.684833
[2025-06-04 18:55:47] 2025-06-04 16:53:21,425 | INFO     | chi2: 0.000208238800275451
[2025-06-04 18:55:47] 2025-06-04 16:53:21,426 | INFO     | -- intersect: -5930547952.684833
[2025-06-04 18:55:47] 2025-06-04 16:53:21,426 | INFO     | current memory leak: 3.39 B/s (using 164 data points, chi2=0.00)
[2025-06-04 18:55:47] 2025-06-04 16:53:21,427 | INFO     | ..............................
[2025-06-04 18:55:47] 2025-06-04 16:53:21,427 | INFO     | . Timing measurements:
[2025-06-04 18:55:47] 2025-06-04 16:53:21,427 | INFO     | . get job = 0 s
[2025-06-04 18:55:47] 2025-06-04 16:53:21,427 | INFO     | . initial setup = 1 s
[2025-06-04 18:55:47] 2025-06-04 16:53:21,427 | INFO     | . payload setup = 7 s
[2025-06-04 18:55:47] 2025-06-04 16:53:21,427 | INFO     | . stage-in = 0 s
[2025-06-04 18:55:47] 2025-06-04 16:53:21,427 | INFO     | . payload execution = 13413 s
[2025-06-04 18:55:47] 2025-06-04 16:53:21,427 | INFO     | . stage-out = 1 s
[2025-06-04 18:55:47] 2025-06-04 16:53:21,427 | INFO     | . log creation = 0 s
[2025-06-04 18:55:47] 2025-06-04 16:53:21,427 | INFO     | ..............................
[2025-06-04 18:55:47] 2025-06-04 16:53:21,525 | INFO     | 
[2025-06-04 18:55:47] 2025-06-04 16:53:21,526 | INFO     | job summary report
[2025-06-04 18:55:47] 2025-06-04 16:53:21,526 | INFO     | --------------------------------------------------
[2025-06-04 18:55:47] 2025-06-04 16:53:21,526 | INFO     | PanDA job id: 6668788502
[2025-06-04 18:55:47] 2025-06-04 16:53:21,526 | INFO     | task id: 44871837
[2025-06-04 18:55:47] 2025-06-04 16:53:21,526 | INFO     | errors: (none)
[2025-06-04 18:55:47] 2025-06-04 16:53:21,526 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:55:47] 2025-06-04 16:53:21,526 | INFO     | pilot state: finished 
[2025-06-04 18:55:47] 2025-06-04 16:53:21,526 | INFO     | transexitcode: 0
[2025-06-04 18:55:47] 2025-06-04 16:53:21,526 | INFO     | exeerrorcode: 0
[2025-06-04 18:55:47] 2025-06-04 16:53:21,526 | INFO     | exeerrordiag: 
[2025-06-04 18:55:47] 2025-06-04 16:53:21,526 | INFO     | exitcode: 0
[2025-06-04 18:55:47] 2025-06-04 16:53:21,527 | INFO     | exitmsg: OK
[2025-06-04 18:55:47] 2025-06-04 16:53:21,527 | INFO     | cpuconsumptiontime: 51970 s
[2025-06-04 18:55:47] 2025-06-04 16:53:21,527 | INFO     | nevents: 400
[2025-06-04 18:55:47] 2025-06-04 16:53:21,527 | INFO     | neventsw: 0
[2025-06-04 18:55:47] 2025-06-04 16:53:21,527 | INFO     | pid: 3791232
[2025-06-04 18:55:47] 2025-06-04 16:53:21,527 | INFO     | pgrp: 3791232
[2025-06-04 18:55:47] 2025-06-04 16:53:21,527 | INFO     | corecount: 4
[2025-06-04 18:55:47] 2025-06-04 16:53:21,527 | INFO     | event service: False
[2025-06-04 18:55:47] 2025-06-04 16:53:21,527 | INFO     | sizes: {0: 2397403, 1: 2397403, 5: 2397637, 11: 2397693, 13425: 2427518, 13426: 2436665, 13436: 2436779}
[2025-06-04 18:55:47] 2025-06-04 16:53:21,527 | INFO     | --------------------------------------------------
[2025-06-04 18:55:47] 2025-06-04 16:53:21,527 | INFO     | 
[2025-06-04 18:55:47] 2025-06-04 16:53:21,528 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-06-04 18:55:47] 2025-06-04 16:53:21,533 | INFO     | size of work directory /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6668788502: 3178568 B (within 2537553920 B limit)
[2025-06-04 18:55:47] 2025-06-04 16:53:21,534 | INFO     | pfn file=/scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6668788502/HITS.44871837._088729.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 18:55:47] 2025-06-04 16:53:21,534 | INFO     | total size of present files: 0 B (workdir size: 3178568 B)
[2025-06-04 18:55:47] 2025-06-04 16:53:21,534 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6668788502/HITS.44871837._088729.pool.root.1 since it does not exist
[2025-06-04 18:55:47] 2025-06-04 16:53:21,551 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:55:47] 2025-06-04 16:53:21,551 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:55:47] 2025-06-04 16:53:21,551 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:55:47] 2025-06-04 16:53:21,551 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:55:47] 2025-06-04 16:53:21,552 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:55:47] 2025-06-04 16:53:21,552 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:55:47] 2025-06-04 16:53:21,552 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:55:47] 2025-06-04 16:53:21,552 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:55:47] 2025-06-04 16:53:21,552 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:55:47] 2025-06-04 16:53:21,552 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:55:47] 2025-06-04 16:53:21,552 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:55:47] 2025-06-04 16:53:21,552 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:55:47] 2025-06-04 16:53:21,552 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:55:47] 2025-06-04 16:53:21,552 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:55:47] 2025-06-04 16:53:21,552 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:55:47] 2025-06-04 16:53:21,553 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:55:47] 2025-06-04 16:53:21,553 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:55:47] 2025-06-04 16:53:21,553 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:55:47] 2025-06-04 16:53:21,553 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:55:47] 2025-06-04 16:53:21,553 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:55:47] 2025-06-04 16:53:21,553 | INFO     | job 6668788502 has completed (purged errors)
[2025-06-04 18:55:47] 2025-06-04 16:53:21,553 | INFO     | overall cleanup function is called
[2025-06-04 18:55:47] 2025-06-04 16:53:21,909 | INFO     | number of running child processes to parent process 3791232: 1
[2025-06-04 18:55:47] 2025-06-04 16:53:21,909 | INFO     | maximum number of monitored processes: 6
[2025-06-04 18:55:47] 2025-06-04 16:53:21,909 | INFO     | aborting job monitoring since job object (job id=6668788502) has expired
[2025-06-04 18:55:47] 2025-06-04 16:53:22,562 | INFO     | --- collectZombieJob: --- 10, [3791232]
[2025-06-04 18:55:47] 2025-06-04 16:53:22,563 | INFO     | zombie collector waiting for pid 3791232
[2025-06-04 18:55:47] 2025-06-04 16:53:22,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:55:47] 2025-06-04 16:53:22,563 | INFO     | collected zombie processes
[2025-06-04 18:55:47] 2025-06-04 16:53:22,563 | INFO     | will attempt to kill all subprocesses of pid=3791232
[2025-06-04 18:55:47] 2025-06-04 16:53:22,936 | INFO     | process IDs to be killed: [3791232] (in reverse order)
[2025-06-04 18:55:47] 2025-06-04 16:53:23,052 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:55:47] 2025-06-04 16:53:23,053 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:55:47] 2025-06-04 16:53:23,065 | INFO     | did not find any defunct processes belonging to 3791232
[2025-06-04 18:55:47] 2025-06-04 16:53:23,078 | INFO     | did not find any defunct processes belonging to 3791232
[2025-06-04 18:55:47] 2025-06-04 16:53:23,078 | INFO     | ready for new job
[2025-06-04 18:55:47] 2025-06-04 16:53:23,078 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:55:47] 2025-06-04 16:53:23,081 | INFO     | **************************************
[2025-06-04 18:55:47] 2025-06-04 16:53:23,081 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:55:47] 2025-06-04 16:53:23,081 | INFO     | **************************************
[2025-06-04 18:55:47] 2025-06-04 16:53:23,081 | INFO     | 
[2025-06-04 18:55:47] 2025-06-04 16:53:23,087 | INFO     | architecture information:
[2025-06-04 18:55:47] 2025-06-04 16:53:23,088 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:55:47] 2025-06-04 16:53:23,105 | INFO     | cat /etc/os-release:
[2025-06-04 18:55:47] NAME="CentOS Linux"
[2025-06-04 18:55:47] VERSION="7 (Core)"
[2025-06-04 18:55:47] ID="centos"
[2025-06-04 18:55:47] ID_LIKE="rhel fedora"
[2025-06-04 18:55:47] VERSION_ID="7"
[2025-06-04 18:55:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:55:47] ANSI_COLOR="0;31"
[2025-06-04 18:55:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:55:47] HOME_URL="https://www.centos.org/"
[2025-06-04 18:55:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:55:47] 
[2025-06-04 18:55:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:55:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:55:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:55:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:55:47] 
[2025-06-04 18:55:47] 2025-06-04 16:53:23,105 | INFO     | **************************************
[2025-06-04 18:55:47] 2025-06-04 16:53:23,608 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-06-04 18:55:47] 2025-06-04 16:53:23,629 | INFO     | sufficient remaining disk space (646119948288 B)
[2025-06-04 18:55:47] 2025-06-04 16:53:23,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:55:47] 2025-06-04 16:53:23,630 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:55:47] 2025-06-04 16:53:23,630 | INFO     | update_server=False
[2025-06-04 18:55:47] 2025-06-04 16:53:23,630 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:55:47] 2025-06-04 16:53:23,630 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:55:47] 2025-06-04 16:53:23,631 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:55:47] 2025-06-04 16:53:23,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:55:47] 2025-06-04 16:53:23,631 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 18:55:47] 2025-06-04 16:53:23,632 | INFO     | aborting loop
[2025-06-04 18:55:47] 2025-06-04 16:53:23,633 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:55:47] 2025-06-04 16:53:23,633 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:55:47] 2025-06-04 16:53:23,633 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:55:47] 2025-06-04 16:53:24,137 | INFO     | all data control threads have been joined
[2025-06-04 18:55:47] 2025-06-04 16:53:24,635 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:55:47] 2025-06-04 16:53:24,638 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:55:47] 2025-06-04 16:53:24,721 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:55:47] 2025-06-04 16:53:24,786 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:55:47] 2025-06-04 16:53:24,801 | INFO     | all job control threads have been joined
[2025-06-04 18:55:47] 2025-06-04 16:53:24,849 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:55:47] 2025-06-04 16:53:24,919 | INFO     | all payload control threads have been joined
[2025-06-04 18:55:47] 2025-06-04 16:53:25,141 | INFO     | [data] control thread has finished
[2025-06-04 18:55:47] 2025-06-04 16:53:25,304 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:55:47] 2025-06-04 16:53:25,444 | INFO     | [job] validate thread has finished
[2025-06-04 18:55:47] 2025-06-04 16:53:25,637 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:55:47] 2025-06-04 16:53:25,701 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:55:47] 2025-06-04 16:53:25,725 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:55:47] 2025-06-04 16:53:25,806 | INFO     | [job] control thread has finished
[2025-06-04 18:55:47] 2025-06-04 16:53:25,924 | INFO     | [payload] control thread has finished
[2025-06-04 18:55:47] 2025-06-04 16:53:25,943 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:55:47] 2025-06-04 16:53:26,534 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:55:47] 2025-06-04 16:53:27,539 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:55:47] 2025-06-04 16:53:27,637 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:55:47] 2025-06-04 16:53:27,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22645320140608)>', '<ExcThread(monitor, started 22644608984832)>']
[2025-06-04 18:55:47] 2025-06-04 16:53:28,657 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:55:47] 2025-06-04 16:53:28,658 | INFO     | [monitor] control thread has ended
[2025-06-04 18:55:47] 2025-06-04 16:53:32,848 | INFO     | all workflow threads have been joined
[2025-06-04 18:55:47] 2025-06-04 16:53:32,849 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:55:47] 2025-06-04 16:53:32,849 | INFO     | traces error code: 0
[2025-06-04 18:55:47] 2025-06-04 16:53:32,849 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:55:47] 2025-06-04 16:53:33,007 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:55:47] 2025-06-04 16:53:33,009 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:55:47] 2025-06-04 16:53:33,012 [wrapper] pilotpid: 3783863
[2025-06-04 18:55:47] 2025-06-04 16:53:33,014 [wrapper] Pilot exit status: 0
[2025-06-04 18:55:47] 2025-06-04 16:53:33,025 [wrapper] pandaids: 6668788502
[2025-06-04 18:55:47] 2025-06-04 16:53:33,092 [wrapper] cleanup supervisor_pilot 4076250 3783864
[2025-06-04 18:55:47] 2025-06-04 16:53:33,095 [wrapper] Test setup, not cleaning
[2025-06-04 18:55:47] 2025-06-04 16:53:33,098 [wrapper] apfmon messages muted
[2025-06-04 18:55:47] 2025-06-04 16:53:33,101 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:55:47] 2025-06-04 16:53:33,103 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:55:47]  *** Error codes and diagnostics ***
[2025-06-04 18:55:47]     "exeErrorCode": 0,
[2025-06-04 18:55:47]     "exeErrorDiag": "",
[2025-06-04 18:55:47]     "pilotErrorCode": 0,
[2025-06-04 18:55:47]     "pilotErrorDiag": "",
[2025-06-04 18:55:47]  *** Listing of results directory ***
[2025-06-04 18:55:47] total 414964
[2025-06-04 18:55:47] -rw-r--r-- 1 boinc boinc      5111 May 28 20:37 queuedata.json
[2025-06-04 18:55:47] -rw-r--r-- 1 boinc boinc    495897 May 28 20:37 pilot3.tar.gz
[2025-06-04 18:55:47] -rwx------ 1 boinc boinc     37140 May 28 20:38 runpilot2-wrapper.sh
[2025-06-04 18:55:47] -rw-r--r-- 1 boinc boinc       100 Jun  4 15:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:55:47] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 15:08 run_atlas
[2025-06-04 18:55:47] -rw-r--r-- 1 boinc boinc       105 Jun  4 15:08 job.xml
[2025-06-04 18:55:47] -rw-r--r-- 2 boinc boinc 222758276 Jun  4 15:09 EVNT.44871834._003454.pool.root.1
[2025-06-04 18:55:47] -rw-r--r-- 1 boinc boinc      6632 Jun  4 15:09 init_data.xml
[2025-06-04 18:55:47] drwxrwx--x 2 boinc boinc      4096 Jun  4 15:09 shared
[2025-06-04 18:55:47] -rw-r--r-- 2 boinc boinc    508886 Jun  4 15:09 input.tar.gz
[2025-06-04 18:55:47] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:09 start_atlas.sh
[2025-06-04 18:55:47] -rw-r--r-- 1 boinc boinc         0 Jun  4 15:09 boinc_lockfile
[2025-06-04 18:55:47] -rw-r--r-- 1 boinc boinc      2559 Jun  4 15:09 pandaJob.out
[2025-06-04 18:55:47] -rw------- 1 boinc boinc    986811 Jun  4 15:09 agis_schedconf.cvmfs.json
[2025-06-04 18:55:47] drwx------ 4 boinc boinc      4096 Jun  4 15:09 pilot3
[2025-06-04 18:55:47] -rw------- 1 boinc boinc 195131117 Jun  4 18:52 HITS.44871837._088729.pool.root.1
[2025-06-04 18:55:47] -rw-r--r-- 1 boinc boinc       529 Jun  4 18:52 boinc_task_state.xml
[2025-06-04 18:55:47] -rw------- 1 boinc boinc      1035 Jun  4 18:53 memory_monitor_summary.json
[2025-06-04 18:55:47] -rw------- 1 boinc boinc   1598969 Jun  4 18:53 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:55:47] -rw------- 1 boinc boinc    342697 Jun  4 18:53 log.44871837._088729.job.log.tgz.1
[2025-06-04 18:55:47] -rw------- 1 boinc boinc        95 Jun  4 18:53 pilot_heartbeat.json
[2025-06-04 18:55:47] -rw------- 1 boinc boinc      7723 Jun  4 18:53 heartbeat.json
[2025-06-04 18:55:47] -rw------- 1 boinc boinc      4486 Jun  4 18:53 pilotlog.txt
[2025-06-04 18:55:47] -rw------- 1 boinc boinc   1260348 Jun  4 18:53 log.44871837._088729.job.log.1
[2025-06-04 18:55:47] -rw------- 1 boinc boinc       357 Jun  4 18:53 output.list
[2025-06-04 18:55:47] -rw-r--r-- 1 boinc boinc       620 Jun  4 18:53 runtime_log
[2025-06-04 18:55:47] -rw------- 1 boinc boinc   1617920 Jun  4 18:53 result.tar.gz
[2025-06-04 18:55:47] -rw-r--r-- 1 boinc boinc      9026 Jun  4 18:53 runtime_log.err
[2025-06-04 18:55:47] -rw------- 1 boinc boinc       665 Jun  4 18:53 XPqMDmGqae7n9Rq4apOajLDm4fhM0noT9bVof3QYDmixTKDmk5JIGn.diag
[2025-06-04 18:55:47] -rw-r--r-- 1 boinc boinc        26 Jun  4 18:55 wrapper_checkpoint.txt
[2025-06-04 18:55:47] -rw-r--r-- 1 boinc boinc      8192 Jun  4 18:55 boinc_mmap_file
[2025-06-04 18:55:47] -rw-r--r-- 1 boinc boinc     21001 Jun  4 18:55 stderr.txt
[2025-06-04 18:55:47] HITS file was successfully produced:
[2025-06-04 18:55:47] -rw------- 1 boinc boinc 195131117 Jun  4 18:52 shared/HITS.pool.root.1
[2025-06-04 18:55:47]  *** Contents of shared directory: ***
[2025-06-04 18:55:47] total 410204
[2025-06-04 18:55:47] -rw-r--r-- 2 boinc boinc 222758276 Jun  4 15:09 ATLAS.root_0
[2025-06-04 18:55:47] -rw-r--r-- 2 boinc boinc    508886 Jun  4 15:09 input.tar.gz
[2025-06-04 18:55:47] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:09 start_atlas.sh
[2025-06-04 18:55:47] -rw------- 1 boinc boinc 195131117 Jun  4 18:52 HITS.pool.root.1
[2025-06-04 18:55:47] -rw------- 1 boinc boinc   1617920 Jun  4 18:53 result.tar.gz
18:55:48 (3780142): run_atlas exited; CPU time 52534.412577
18:55:48 (3780142): called boinc_finish(0)

</stderr_txt>
]]>

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