Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:36:39 (4681): wrapper (7.7.26015): starting
17:36:39 (4681): wrapper: running run_atlas (--nthreads 12)
[2025-02-26 17:36:39] Arguments: --nthreads 12
[2025-02-26 17:36:39] Threads: 12
[2025-02-26 17:36:39] Checking for CVMFS
[2025-02-26 17:36:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-26 17:36:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-26 17:36:39] Running cvmfs_config stat atlas.cern.ch
[2025-02-26 17:36:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-26 17:36:40] 2.11.2.0 14409 303927 158964 143085 3 1 13718220 20275200 1 130560 0 25604201 99.986 8252368 43655 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-26 17:36:40] CVMFS is ok
[2025-02-26 17:36:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-26 17:36:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-26 17:36:40] Further information can be found at the LHC@home message board.
[2025-02-26 17:36:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 17:36:40] Checking for apptainer binary...
[2025-02-26 17:36:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-26 17:36:40] Running /usr/bin/apptainer --version
[2025-02-26 17:36:40] apptainer version 1.3.2-1.el7
[2025-02-26 17:36:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 17:36:41] c-205-32.aglt2.org
[2025-02-26 17:36:41] apptainer works
[2025-02-26 17:36:41] Set ATHENA_PROC_NUMBER=12
[2025-02-26 17:36:41] Set ATHENA_CORE_NUMBER=12
[2025-02-26 17:36:41] Starting ATLAS job with PandaID=6522370980
[2025-02-26 17:36:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 20:06:17]  *** The last 200 lines of the pilot log: ***
[2025-02-26 20:06:17] 2025-02-27 01:05:57,379 | INFO     | intersect: 12443666743.353054
[2025-02-26 20:06:17] 2025-02-27 01:05:57,379 | INFO     | chi2: 0.04324474946844679
[2025-02-26 20:06:17] 2025-02-27 01:05:57,379 | INFO     | current chi2=0.04324474946844679 (change=32.376900735181096 %)
[2025-02-26 20:06:17] 2025-02-27 01:05:57,380 | INFO     | model: linear, x: [1740611274.0, 1740611335.0, 1740611396.0, 1740611457.0, 1740611518.0, 1740611579.0, 1740611640.0, 1740611701.0, 1740611762.0, 1740611823.0, 1740
[2025-02-26 20:06:17] 2025-02-27 01:05:57,380 | INFO     | sum of square deviations: 483971865.0
[2025-02-26 20:06:17] 2025-02-27 01:05:57,380 | INFO     | sum of deviations: 462970327.5
[2025-02-26 20:06:17] 2025-02-27 01:05:57,380 | INFO     | mean x: 1740614781.5
[2025-02-26 20:06:17] 2025-02-27 01:05:57,380 | INFO     | mean y: 2777337.3362068967
[2025-02-26 20:06:17] 2025-02-27 01:05:57,381 | INFO     | -- intersect: -1662304981.9477785
[2025-02-26 20:06:17] 2025-02-27 01:05:57,381 | INFO     | intersect: -1662304981.9477785
[2025-02-26 20:06:17] 2025-02-27 01:05:57,381 | INFO     | chi2: 0.009648540735202571
[2025-02-26 20:06:17] 2025-02-27 01:05:57,381 | INFO     | current chi2=0.009648540735202571 (change=77.6885266909858 %)
[2025-02-26 20:06:17] 2025-02-27 01:05:57,381 | INFO     | model: linear, x: [1740611579.0, 1740611640.0, 1740611701.0, 1740611762.0, 1740611823.0, 1740611884.0, 1740611945.0, 1740612006.0, 1740612067.0, 1740612128.0, 1740
[2025-02-26 20:06:17] 2025-02-27 01:05:57,381 | INFO     | sum of square deviations: 424045160.0
[2025-02-26 20:06:17] 2025-02-27 01:05:57,382 | INFO     | sum of deviations: 765072248.0
[2025-02-26 20:06:17] 2025-02-27 01:05:57,382 | INFO     | mean x: 1740614934.0
[2025-02-26 20:06:17] 2025-02-27 01:05:57,382 | INFO     | mean y: 2776656.054054054
[2025-02-26 20:06:17] 2025-02-27 01:05:57,382 | INFO     | -- intersect: -3137681733.938539
[2025-02-26 20:06:17] 2025-02-27 01:05:57,382 | INFO     | intersect: -3137681733.938539
[2025-02-26 20:06:17] 2025-02-27 01:05:57,383 | INFO     | chi2: 0.0005235253502088269
[2025-02-26 20:06:17] 2025-02-27 01:05:57,383 | INFO     | current chi2=0.0005235253502088269 (change=94.57404632911222 %)
[2025-02-26 20:06:17] 2025-02-27 01:05:57,383 | INFO     | model: linear, x: [1740611884.0, 1740611945.0, 1740612006.0, 1740612067.0, 1740612128.0, 1740612189.0, 1740612250.0, 1740612311.0, 1740612372.0, 1740612433.0, 1740
[2025-02-26 20:06:17] 2025-02-27 01:05:57,383 | INFO     | sum of square deviations: 369281342.5
[2025-02-26 20:06:17] 2025-02-27 01:05:57,383 | INFO     | sum of deviations: 331597159.0
[2025-02-26 20:06:17] 2025-02-27 01:05:57,384 | INFO     | mean x: 1740615086.5
[2025-02-26 20:06:17] 2025-02-27 01:05:57,384 | INFO     | mean y: 2777860.037735849
[2025-02-26 20:06:17] 2025-02-27 01:05:57,384 | INFO     | -- intersect: -1560212064.3610015
[2025-02-26 20:06:17] 2025-02-27 01:05:57,384 | INFO     | intersect: -1560212064.3610015
[2025-02-26 20:06:17] 2025-02-27 01:05:57,384 | INFO     | chi2: 0.0002100352608898876
[2025-02-26 20:06:17] 2025-02-27 01:05:57,384 | INFO     | current chi2=0.0002100352608898876 (change=59.88059397580127 %)
[2025-02-26 20:06:17] 2025-02-27 01:05:57,384 | INFO     | model: linear, x: [1740612189.0, 1740612250.0, 1740612311.0, 1740612372.0, 1740612433.0, 1740612494.0, 1740612555.0, 1740612616.0, 1740612677.0, 1740612738.0, 1740
[2025-02-26 20:06:17] 2025-02-27 01:05:57,385 | INFO     | sum of square deviations: 319447850.0
[2025-02-26 20:06:17] 2025-02-27 01:05:57,385 | INFO     | sum of deviations: 83006725.99999999
[2025-02-26 20:06:17] 2025-02-27 01:05:57,385 | INFO     | mean x: 1740615239.0
[2025-02-26 20:06:17] 2025-02-27 01:05:57,385 | INFO     | mean y: 2778620.5445544557
[2025-02-26 20:06:17] 2025-02-27 01:05:57,385 | INFO     | -- intersect: -449510453.290494
[2025-02-26 20:06:17] 2025-02-27 01:05:57,386 | INFO     | intersect: -449510453.290494
[2025-02-26 20:06:17] 2025-02-27 01:05:57,386 | INFO     | chi2: 8.470374468108305e-05
[2025-02-26 20:06:17] 2025-02-27 01:05:57,386 | INFO     | current chi2=8.470374468108305e-05 (change=59.67165497726139 %)
[2025-02-26 20:06:17] 2025-02-27 01:05:57,386 | INFO     | model: linear, x: [1740612494.0, 1740612555.0, 1740612616.0, 1740612677.0, 1740612738.0, 1740612799.0, 1740612860.0, 1740612921.0, 1740612982.0, 1740613043.0, 1740
[2025-02-26 20:06:17] 2025-02-27 01:05:57,386 | INFO     | sum of square deviations: 274312120.0
[2025-02-26 20:06:17] 2025-02-27 01:05:57,387 | INFO     | sum of deviations: -48095388.99999999
[2025-02-26 20:06:17] 2025-02-27 01:05:57,387 | INFO     | mean x: 1740615391.5
[2025-02-26 20:06:17] 2025-02-27 01:05:57,387 | INFO     | mean y: 2779056.1458333335
[2025-02-26 20:06:17] 2025-02-27 01:05:57,387 | INFO     | -- intersect: 307962707.3588376
[2025-02-26 20:06:17] 2025-02-27 01:05:57,387 | INFO     | intersect: 307962707.3588376
[2025-02-26 20:06:17] 2025-02-27 01:05:57,387 | INFO     | chi2: 1.4749113399114433e-05
[2025-02-26 20:06:17] 2025-02-27 01:05:57,387 | INFO     | current chi2=1.4749113399114433e-05 (change=82.58741280607354 %)
[2025-02-26 20:06:17] 2025-02-27 01:05:57,388 | INFO     | left removable region not found
[2025-02-26 20:06:17] 2025-02-27 01:05:57,388 | INFO     | model: linear, x: [1740609444.0, 1740609505.0, 1740609566.0, 1740609627.0, 1740609688.0, 1740609749.0, 1740609810.0, 1740609871.0, 1740609932.0, 1740609993.0, 1740
[2025-02-26 20:06:17] 2025-02-27 01:05:57,388 | INFO     | sum of square deviations: 850825255.0
[2025-02-26 20:06:17] 2025-02-27 01:05:57,389 | INFO     | sum of deviations: 80749960270.50003
[2025-02-26 20:06:17] 2025-02-27 01:05:57,389 | INFO     | mean x: 1740613683.5
[2025-02-26 20:06:17] 2025-02-27 01:05:57,389 | INFO     | mean y: 2635308.3785714284
[2025-02-26 20:06:17] 2025-02-27 01:05:57,389 | INFO     | -- intersect: -165195194637.22372
[2025-02-26 20:06:17] 2025-02-27 01:05:57,389 | INFO     | intersect: -165195194637.22372
[2025-02-26 20:06:17] 2025-02-27 01:05:57,389 | INFO     | chi2: 5.201791501516772
[2025-02-26 20:06:17] 2025-02-27 01:05:57,389 | INFO     | -- intersect: -165195194637.22372
[2025-02-26 20:06:17] 2025-02-27 01:05:57,390 | INFO     | current memory leak: 94.91 B/s (using 140 data points, chi2=5.20)
[2025-02-26 20:06:17] 2025-02-27 01:05:57,390 | INFO     | ..............................
[2025-02-26 20:06:17] 2025-02-27 01:05:57,390 | INFO     | . Timing measurements:
[2025-02-26 20:06:17] 2025-02-27 01:05:57,390 | INFO     | . get job = 0 s
[2025-02-26 20:06:17] 2025-02-27 01:05:57,390 | INFO     | . initial setup = 2 s
[2025-02-26 20:06:17] 2025-02-27 01:05:57,390 | INFO     | . payload setup = 7 s
[2025-02-26 20:06:17] 2025-02-27 01:05:57,391 | INFO     | . stage-in = 0 s
[2025-02-26 20:06:17] 2025-02-27 01:05:57,391 | INFO     | . payload execution = 8905 s
[2025-02-26 20:06:17] 2025-02-27 01:05:57,391 | INFO     | . stage-out = 0 s
[2025-02-26 20:06:17] 2025-02-27 01:05:57,391 | INFO     | . log creation = 0 s
[2025-02-26 20:06:17] 2025-02-27 01:05:57,391 | INFO     | ..............................
[2025-02-26 20:06:17] 2025-02-27 01:05:57,802 | INFO     | 
[2025-02-26 20:06:17] 2025-02-27 01:05:57,802 | INFO     | job summary report
[2025-02-26 20:06:17] 2025-02-27 01:05:57,802 | INFO     | --------------------------------------------------
[2025-02-26 20:06:17] 2025-02-27 01:05:57,802 | INFO     | PanDA job id: 6522370980
[2025-02-26 20:06:17] 2025-02-27 01:05:57,803 | INFO     | task id: 43197887
[2025-02-26 20:06:17] 2025-02-27 01:05:57,803 | INFO     | errors: (none)
[2025-02-26 20:06:17] 2025-02-27 01:05:57,803 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 20:06:17] 2025-02-27 01:05:57,803 | INFO     | pilot state: finished 
[2025-02-26 20:06:17] 2025-02-27 01:05:57,803 | INFO     | transexitcode: 0
[2025-02-26 20:06:17] 2025-02-27 01:05:57,803 | INFO     | exeerrorcode: 0
[2025-02-26 20:06:17] 2025-02-27 01:05:57,804 | INFO     | exeerrordiag: 
[2025-02-26 20:06:17] 2025-02-27 01:05:57,804 | INFO     | exitcode: 0
[2025-02-26 20:06:17] 2025-02-27 01:05:57,804 | INFO     | exitmsg: OK
[2025-02-26 20:06:17] 2025-02-27 01:05:57,804 | INFO     | cpuconsumptiontime: 92864 s
[2025-02-26 20:06:17] 2025-02-27 01:05:57,804 | INFO     | nevents: 400
[2025-02-26 20:06:17] 2025-02-27 01:05:57,804 | INFO     | neventsw: 0
[2025-02-26 20:06:17] 2025-02-27 01:05:57,804 | INFO     | pid: 14686
[2025-02-26 20:06:17] 2025-02-27 01:05:57,805 | INFO     | pgrp: 14686
[2025-02-26 20:06:17] 2025-02-27 01:05:57,805 | INFO     | corecount: 12
[2025-02-26 20:06:17] 2025-02-27 01:05:57,805 | INFO     | event service: False
[2025-02-26 20:06:17] 2025-02-27 01:05:57,805 | INFO     | sizes: {0: 2363776, 5: 2363982, 11: 2364010, 8916: 2391763, 8918: 2400704, 8919: 2400760, 8926: 2401058}
[2025-02-26 20:06:17] 2025-02-27 01:05:57,805 | INFO     | --------------------------------------------------
[2025-02-26 20:06:17] 2025-02-27 01:05:57,805 | INFO     | 
[2025-02-26 20:06:17] 2025-02-27 01:05:57,806 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-26 20:06:17] 2025-02-27 01:05:57,924 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 20:06:17] 2025-02-27 01:05:57,924 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 20:06:17] 2025-02-27 01:05:57,925 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 20:06:17] 2025-02-27 01:05:57,925 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 20:06:17] 2025-02-27 01:05:57,925 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 20:06:17] 2025-02-27 01:05:57,925 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 20:06:17] 2025-02-27 01:05:57,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 20:06:17] 2025-02-27 01:05:57,925 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 20:06:17] 2025-02-27 01:05:57,926 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 20:06:17] 2025-02-27 01:05:57,926 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 20:06:17] 2025-02-27 01:05:57,926 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 20:06:17] 2025-02-27 01:05:57,926 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 20:06:17] 2025-02-27 01:05:57,926 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 20:06:17] 2025-02-27 01:05:57,926 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 20:06:17] 2025-02-27 01:05:57,927 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 20:06:17] 2025-02-27 01:05:57,927 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 20:06:17] 2025-02-27 01:05:57,927 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 20:06:17] 2025-02-27 01:05:57,927 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 20:06:17] 2025-02-27 01:05:57,927 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 20:06:17] 2025-02-27 01:05:57,928 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 20:06:17] 2025-02-27 01:05:57,928 | INFO     | job 6522370980 has completed (purged errors)
[2025-02-26 20:06:17] 2025-02-27 01:05:57,928 | INFO     | overall cleanup function is called
[2025-02-26 20:06:17] 2025-02-27 01:05:58,936 | INFO     | --- collectZombieJob: --- 10, [14686]
[2025-02-26 20:06:17] 2025-02-27 01:05:58,936 | INFO     | zombie collector waiting for pid 14686
[2025-02-26 20:06:17] 2025-02-27 01:05:58,937 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 20:06:17] 2025-02-27 01:05:58,937 | INFO     | collected zombie processes
[2025-02-26 20:06:17] 2025-02-27 01:05:58,937 | INFO     | will attempt to kill all subprocesses of pid=14686
[2025-02-26 20:06:17] 2025-02-27 01:05:58,998 | INFO     | process IDs to be killed: [14686] (in reverse order)
[2025-02-26 20:06:17] 2025-02-27 01:05:59,049 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 20:06:17] 2025-02-27 01:05:59,050 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 20:06:17] 2025-02-27 01:05:59,053 | INFO     | did not find any defunct processes belonging to 14686
[2025-02-26 20:06:17] 2025-02-27 01:05:59,056 | INFO     | did not find any defunct processes belonging to 14686
[2025-02-26 20:06:17] 2025-02-27 01:05:59,057 | INFO     | ready for new job
[2025-02-26 20:06:17] 2025-02-27 01:05:59,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 20:06:17] 2025-02-27 01:05:59,059 | INFO     | **************************************
[2025-02-26 20:06:17] 2025-02-27 01:05:59,059 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 20:06:17] 2025-02-27 01:05:59,059 | INFO     | **************************************
[2025-02-26 20:06:17] 2025-02-27 01:05:59,060 | INFO     | 
[2025-02-26 20:06:17] 2025-02-27 01:05:59,060 | INFO     | architecture information:
[2025-02-26 20:06:17] 2025-02-27 01:05:59,061 | INFO     | executing command: cat /etc/os-release
[2025-02-26 20:06:17] 2025-02-27 01:05:59,075 | INFO     | cat /etc/os-release:
[2025-02-26 20:06:17] NAME="CentOS Linux"
[2025-02-26 20:06:17] VERSION="7 (Core)"
[2025-02-26 20:06:17] ID="centos"
[2025-02-26 20:06:17] ID_LIKE="rhel fedora"
[2025-02-26 20:06:17] VERSION_ID="7"
[2025-02-26 20:06:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 20:06:17] ANSI_COLOR="0;31"
[2025-02-26 20:06:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 20:06:17] HOME_URL="https://www.centos.org/"
[2025-02-26 20:06:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 20:06:17] 
[2025-02-26 20:06:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 20:06:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 20:06:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 20:06:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 20:06:17] 
[2025-02-26 20:06:17] 2025-02-27 01:05:59,075 | INFO     | **************************************
[2025-02-26 20:06:17] 2025-02-27 01:05:59,578 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-26 20:06:17] 2025-02-27 01:05:59,595 | INFO     | sufficient remaining disk space (29068623872 B)
[2025-02-26 20:06:17] 2025-02-27 01:05:59,595 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 20:06:17] 2025-02-27 01:05:59,595 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 20:06:17] 2025-02-27 01:05:59,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 20:06:17] 2025-02-27 01:05:59,830 | INFO     | aborting loop
[2025-02-26 20:06:17] 2025-02-27 01:05:59,927 | INFO     | all data control threads have been joined
[2025-02-26 20:06:17] 2025-02-27 01:05:59,947 | INFO     | all payload control threads have been joined
[2025-02-26 20:06:17] 2025-02-27 01:06:00,121 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 20:06:17] 2025-02-27 01:06:00,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 20:06:17] 2025-02-27 01:06:00,121 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 20:06:17] 2025-02-27 01:06:00,243 | INFO     | all job control threads have been joined
[2025-02-26 20:06:17] 2025-02-27 01:06:00,601 | INFO     | [job] retrieve thread has finished
[2025-02-26 20:06:17] 2025-02-27 01:06:00,769 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 20:06:17] 2025-02-27 01:06:00,797 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 20:06:17] 2025-02-27 01:06:00,836 | INFO     | [job] job monitor thread has finished
[2025-02-26 20:06:17] 2025-02-27 01:06:00,874 | INFO     | [data] copytool_in thread has finished
[2025-02-26 20:06:17] 2025-02-27 01:06:00,933 | INFO     | [data] control thread has finished
[2025-02-26 20:06:17] 2025-02-27 01:06:00,953 | INFO     | [payload] control thread has finished
[2025-02-26 20:06:17] 2025-02-27 01:06:00,992 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 20:06:17] 2025-02-27 01:06:01,012 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 20:06:17] 2025-02-27 01:06:01,248 | INFO     | [job] control thread has finished
[2025-02-26 20:06:17] 2025-02-27 01:06:01,681 | INFO     | [job] validate thread has finished
[2025-02-26 20:06:17] 2025-02-27 01:06:01,722 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 20:06:17] 2025-02-27 01:06:01,880 | INFO     | [payload] validate_post thread has finished
[2025-02-26 20:06:17] 2025-02-27 01:06:02,094 | INFO     | [payload] failed_post thread has finished
[2025-02-26 20:06:17] 2025-02-27 01:06:02,491 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 20:06:17] 2025-02-27 01:06:02,773 | INFO     | [data] copytool_out thread has finished
[2025-02-26 20:06:17] 2025-02-27 01:06:03,492 | INFO     | [job] queue monitor thread has finished
[2025-02-26 20:06:17] 2025-02-27 01:06:05,018 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 20:06:17] 2025-02-27 01:06:10,505 | INFO     | job.realtimelogging is not enabled
[2025-02-26 20:06:17] 2025-02-27 01:06:11,510 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 20:06:17] 2025-02-27 01:06:12,581 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140240618313536)>', '<ExcThread(monitor, started 140240169707264)>']
[2025-02-26 20:06:17] 2025-02-27 01:06:13,188 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 20:06:17] 2025-02-27 01:06:13,188 | INFO     | [monitor] control thread has ended
[2025-02-26 20:06:17] 2025-02-27 01:06:17,607 | INFO     | all workflow threads have been joined
[2025-02-26 20:06:17] 2025-02-27 01:06:17,607 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 20:06:17] 2025-02-27 01:06:17,607 | INFO     | traces error code: 0
[2025-02-26 20:06:17] 2025-02-27 01:06:17,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 20:06:17] 2025-02-27 01:06:17,706 [wrapper] ==== pilot stdout END ====
[2025-02-26 20:06:17] 2025-02-27 01:06:17,709 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 20:06:17] 2025-02-27 01:06:17,713 [wrapper] pilotpid: 8286
[2025-02-26 20:06:17] 2025-02-27 01:06:17,717 [wrapper] Pilot exit status: 0
[2025-02-26 20:06:17] 2025-02-27 01:06:17,732 [wrapper] pandaids: 6522370980
[2025-02-26 20:06:17] 2025-02-27 01:06:17,771 [wrapper] cleanup supervisor_pilot  9878 8287
[2025-02-26 20:06:17] 2025-02-27 01:06:17,774 [wrapper] Test setup, not cleaning
[2025-02-26 20:06:17] 2025-02-27 01:06:17,781 [wrapper] apfmon messages muted
[2025-02-26 20:06:17] 2025-02-27 01:06:17,785 [wrapper] ==== wrapper stdout END ====
[2025-02-26 20:06:17] 2025-02-27 01:06:17,788 [wrapper] ==== wrapper stderr END ====
[2025-02-26 20:06:17]  *** Error codes and diagnostics ***
[2025-02-26 20:06:17]     "exeErrorCode": 0,
[2025-02-26 20:06:17]     "exeErrorDiag": "",
[2025-02-26 20:06:17]     "pilotErrorCode": 0,
[2025-02-26 20:06:17]     "pilotErrorDiag": "",
[2025-02-26 20:06:17]  *** Listing of results directory ***
[2025-02-26 20:06:17] total 639104
[2025-02-26 20:06:17] -rw-r--r-- 1 boincer umatlas    491065 Feb 21 10:12 pilot3.tar.gz
[2025-02-26 20:06:17] -rw-r--r-- 1 boincer umatlas      5118 Feb 21 10:34 queuedata.json
[2025-02-26 20:06:17] -rwx------ 1 boincer umatlas     35865 Feb 21 10:35 runpilot2-wrapper.sh
[2025-02-26 20:06:17] -rw-r--r-- 1 boincer umatlas       100 Feb 26 17:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 20:06:17] -rwxr-xr-x 1 boincer umatlas      7986 Feb 26 17:36 run_atlas
[2025-02-26 20:06:17] -rw-r--r-- 1 boincer umatlas       105 Feb 26 17:36 job.xml
[2025-02-26 20:06:17] -rw-r--r-- 2 boincer umatlas 333187389 Feb 26 17:36 EVNT.43092741._000432.pool.root.1
[2025-02-26 20:06:17] -rw-r--r-- 2 boincer umatlas     17569 Feb 26 17:36 start_atlas.sh
[2025-02-26 20:06:17] drwxrwx--x 2 boincer umatlas      4096 Feb 26 17:36 shared
[2025-02-26 20:06:17] -rw-r--r-- 2 boincer umatlas    503558 Feb 26 17:36 input.tar.gz
[2025-02-26 20:06:17] -rw-r--r-- 1 boincer umatlas         0 Feb 26 17:36 boinc_lockfile
[2025-02-26 20:06:17] -rw-r--r-- 1 boincer umatlas      2525 Feb 26 17:36 pandaJob.out
[2025-02-26 20:06:17] -rw------- 1 boincer umatlas       424 Feb 26 17:36 setup.sh.local
[2025-02-26 20:06:17] -rw------- 1 boincer umatlas    989821 Feb 26 17:36 agis_schedconf.cvmfs.json
[2025-02-26 20:06:17] -rw------- 1 boincer umatlas   1569202 Feb 26 17:36 agis_ddmendpoints.agis.ALL.json
[2025-02-26 20:06:17] drwx------ 4 boincer umatlas      4096 Feb 26 17:36 pilot3
[2025-02-26 20:06:17] -rw-r--r-- 1 boincer umatlas      5868 Feb 26 20:04 init_data.xml
[2025-02-26 20:06:17] -rw------- 1 boincer umatlas 314922134 Feb 26 20:05 HITS.43197887._025113.pool.root.1
[2025-02-26 20:06:17] -rw-r--r-- 1 boincer umatlas       529 Feb 26 20:05 boinc_task_state.xml
[2025-02-26 20:06:17] -rw------- 1 boincer umatlas      1046 Feb 26 20:05 memory_monitor_summary.json
[2025-02-26 20:06:17] -rw------- 1 boincer umatlas    399947 Feb 26 20:05 log.43197887._025113.job.log.tgz.1
[2025-02-26 20:06:17] -rw------- 1 boincer umatlas        95 Feb 26 20:05 pilot_heartbeat.json
[2025-02-26 20:06:17] -rw------- 1 boincer umatlas      7761 Feb 26 20:05 heartbeat.json
[2025-02-26 20:06:17] -rw-r--r-- 1 boincer umatlas        27 Feb 26 20:06 wrapper_checkpoint.txt
[2025-02-26 20:06:17] -rw-r--r-- 1 boincer umatlas      8192 Feb 26 20:06 boinc_mmap_file
[2025-02-26 20:06:17] -rw------- 1 boincer umatlas      4287 Feb 26 20:06 pilotlog.txt
[2025-02-26 20:06:17] -rw------- 1 boincer umatlas    871724 Feb 26 20:06 log.43197887._025113.job.log.1
[2025-02-26 20:06:17] -rw------- 1 boincer umatlas       357 Feb 26 20:06 output.list
[2025-02-26 20:06:17] -rw-r--r-- 1 boincer umatlas       620 Feb 26 20:06 runtime_log
[2025-02-26 20:06:17] -rw------- 1 boincer umatlas   1290240 Feb 26 20:06 result.tar.gz
[2025-02-26 20:06:17] -rw-r--r-- 1 boincer umatlas     11015 Feb 26 20:06 runtime_log.err
[2025-02-26 20:06:17] -rw------- 1 boincer umatlas       662 Feb 26 20:06 er4NDmNFk56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmFYsKDmGj7Chm.diag
[2025-02-26 20:06:17] -rw-r--r-- 1 boincer umatlas     21524 Feb 26 20:06 stderr.txt
[2025-02-26 20:06:17] HITS file was successfully produced:
[2025-02-26 20:06:17] -rw------- 1 boincer umatlas 314922134 Feb 26 20:05 shared/HITS.pool.root.1
[2025-02-26 20:06:17]  *** Contents of shared directory: ***
[2025-02-26 20:06:17] total 634700
[2025-02-26 20:06:17] -rw-r--r-- 2 boincer umatlas 333187389 Feb 26 17:36 ATLAS.root_0
[2025-02-26 20:06:17] -rw-r--r-- 2 boincer umatlas     17569 Feb 26 17:36 start_atlas.sh
[2025-02-26 20:06:17] -rw-r--r-- 2 boincer umatlas    503558 Feb 26 17:36 input.tar.gz
[2025-02-26 20:06:17] -rw------- 1 boincer umatlas 314922134 Feb 26 20:05 HITS.pool.root.1
[2025-02-26 20:06:17] -rw------- 1 boincer umatlas   1290240 Feb 26 20:06 result.tar.gz
20:06:19 (4681): run_atlas exited; CPU time 92748.129962
20:06:19 (4681): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN