Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:07:22 (882125): wrapper (7.7.26015): starting
11:07:22 (882125): wrapper: running run_atlas (--nthreads 3)
[2025-02-26 11:07:22] Arguments: --nthreads 3
[2025-02-26 11:07:22] Threads: 3
[2025-02-26 11:07:22] Checking for CVMFS
[2025-02-26 11:07:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-26 11:07:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-26 11:07:22] Running cvmfs_config stat atlas.cern.ch
[2025-02-26 11:07:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-26 11:07:22] 2.9.2.0 118724 1214 72952 143069 0 56 4218860 36864000 0 130560 0 1234740 99.991 356605 31571 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-02-26 11:07:22] CVMFS is ok
[2025-02-26 11:07:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-26 11:07:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-26 11:07:22] Further information can be found at the LHC@home message board.
[2025-02-26 11:07:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 11:07:22] Checking for apptainer binary...
[2025-02-26 11:07:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-26 11:07:22] Running /usr/bin/apptainer --version
[2025-02-26 11:07:22] apptainer version 1.3.6-4.1
[2025-02-26 11:07:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 11:07:22] legendA257a
[2025-02-26 11:07:22] apptainer works
[2025-02-26 11:07:22] Set ATHENA_PROC_NUMBER=3
[2025-02-26 11:07:22] Set ATHENA_CORE_NUMBER=3
[2025-02-26 11:07:22] Starting ATLAS job with PandaID=6522811810
[2025-02-26 11:07:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 14:14:16]  *** The last 200 lines of the pilot log: ***
[2025-02-26 14:14:16] 2025-02-26 13:13:36,181 | INFO     | model: linear, x: [1740564774.0, 1740564835.0, 1740564896.0, 1740564957.0, 1740565018.0, 1740565079.0, 1740565140.0, 1740565201.0, 1740565262.0, 1740565323.0, 1740
[2025-02-26 14:14:16] 2025-02-26 13:13:36,181 | INFO     | sum of square deviations: 1748737904.5
[2025-02-26 14:14:16] 2025-02-26 13:13:36,181 | INFO     | sum of deviations: 28815659155.000004
[2025-02-26 14:14:16] 2025-02-26 13:13:36,181 | INFO     | mean x: 1740570172.5
[2025-02-26 14:14:16] 2025-02-26 13:13:36,181 | INFO     | mean y: 2359117.033707865
[2025-02-26 14:14:16] 2025-02-26 13:13:36,182 | INFO     | -- intersect: -28678712355.74374
[2025-02-26 14:14:16] 2025-02-26 13:13:36,182 | INFO     | intersect: -28678712355.74374
[2025-02-26 14:14:16] 2025-02-26 13:13:36,182 | INFO     | chi2: 0.9425751755056316
[2025-02-26 14:14:16] 2025-02-26 13:13:36,182 | INFO     | current chi2=0.9425751755056316 (change=65.83061714421687 %)
[2025-02-26 14:14:16] 2025-02-26 13:13:36,182 | INFO     | model: linear, x: [1740565079.0, 1740565140.0, 1740565201.0, 1740565262.0, 1740565323.0, 1740565384.0, 1740565445.0, 1740565506.0, 1740565567.0, 1740565628.0, 1740
[2025-02-26 14:14:16] 2025-02-26 13:13:36,182 | INFO     | sum of square deviations: 1605470102.0
[2025-02-26 14:14:16] 2025-02-26 13:13:36,182 | INFO     | sum of deviations: 1613823014.999999
[2025-02-26 14:14:16] 2025-02-26 13:13:36,182 | INFO     | mean x: 1740570325.0
[2025-02-26 14:14:16] 2025-02-26 13:13:36,182 | INFO     | mean y: 2388132.0462427745
[2025-02-26 14:14:16] 2025-02-26 13:13:36,182 | INFO     | -- intersect: -1747238003.1348336
[2025-02-26 14:14:16] 2025-02-26 13:13:36,182 | INFO     | intersect: -1747238003.1348336
[2025-02-26 14:14:16] 2025-02-26 13:13:36,182 | INFO     | chi2: 0.005976321053315731
[2025-02-26 14:14:16] 2025-02-26 13:13:36,182 | INFO     | current chi2=0.005976321053315731 (change=99.3659581528752 %)
[2025-02-26 14:14:16] 2025-02-26 13:13:36,182 | INFO     | model: linear, x: [1740565384.0, 1740565445.0, 1740565506.0, 1740565567.0, 1740565628.0, 1740565689.0, 1740565750.0, 1740565811.0, 1740565872.0, 1740565933.0, 1740
[2025-02-26 14:14:16] 2025-02-26 13:13:36,183 | INFO     | sum of square deviations: 1470248962.0
[2025-02-26 14:14:16] 2025-02-26 13:13:36,183 | INFO     | sum of deviations: 868499822.0
[2025-02-26 14:14:16] 2025-02-26 13:13:36,183 | INFO     | mean x: 1740570477.5
[2025-02-26 14:14:16] 2025-02-26 13:13:36,183 | INFO     | mean y: 2388971.9166666665
[2025-02-26 14:14:16] 2025-02-26 13:13:36,183 | INFO     | -- intersect: -1025794137.8546463
[2025-02-26 14:14:16] 2025-02-26 13:13:36,183 | INFO     | intersect: -1025794137.8546463
[2025-02-26 14:14:16] 2025-02-26 13:13:36,183 | INFO     | chi2: 0.003496614505161855
[2025-02-26 14:14:16] 2025-02-26 13:13:36,183 | INFO     | current chi2=0.003496614505161855 (change=41.49219103244305 %)
[2025-02-26 14:14:16] 2025-02-26 13:13:36,183 | INFO     | model: linear, x: [1740565689.0, 1740565750.0, 1740565811.0, 1740565872.0, 1740565933.0, 1740565994.0, 1740566055.0, 1740566116.0, 1740566177.0, 1740566238.0, 1740
[2025-02-26 14:14:16] 2025-02-26 13:13:36,183 | INFO     | sum of square deviations: 1342841922.0
[2025-02-26 14:14:16] 2025-02-26 13:13:36,184 | INFO     | sum of deviations: -97413156.99999984
[2025-02-26 14:14:16] 2025-02-26 13:13:36,184 | INFO     | mean x: 1740570630.0
[2025-02-26 14:14:16] 2025-02-26 13:13:36,184 | INFO     | mean y: 2390124.4049079753
[2025-02-26 14:14:16] 2025-02-26 13:13:36,184 | INFO     | -- intersect: 128655530.08813822
[2025-02-26 14:14:16] 2025-02-26 13:13:36,184 | INFO     | intersect: 128655530.08813822
[2025-02-26 14:14:16] 2025-02-26 13:13:36,184 | INFO     | chi2: 0.002241535298699642
[2025-02-26 14:14:16] 2025-02-26 13:13:36,184 | INFO     | current chi2=0.002241535298699642 (change=35.89412572101986 %)
[2025-02-26 14:14:16] 2025-02-26 13:13:36,184 | INFO     | model: linear, x: [1740565994.0, 1740566055.0, 1740566116.0, 1740566177.0, 1740566238.0, 1740566299.0, 1740566360.0, 1740566421.0, 1740566482.0, 1740566543.0, 1740
[2025-02-26 14:14:16] 2025-02-26 13:13:36,184 | INFO     | sum of square deviations: 1223016419.5
[2025-02-26 14:14:16] 2025-02-26 13:13:36,184 | INFO     | sum of deviations: -344584485.9999998
[2025-02-26 14:14:16] 2025-02-26 13:13:36,184 | INFO     | mean x: 1740570782.5
[2025-02-26 14:14:16] 2025-02-26 13:13:36,184 | INFO     | mean y: 2390437.7848101268
[2025-02-26 14:14:16] 2025-02-26 13:13:36,184 | INFO     | -- intersect: 492795700.43826056
[2025-02-26 14:14:16] 2025-02-26 13:13:36,184 | INFO     | intersect: 492795700.43826056
[2025-02-26 14:14:16] 2025-02-26 13:13:36,184 | INFO     | chi2: 0.002130331255393535
[2025-02-26 14:14:16] 2025-02-26 13:13:36,184 | INFO     | current chi2=0.002130331255393535 (change=4.96106589847676 %)
[2025-02-26 14:14:16] 2025-02-26 13:13:36,184 | INFO     | left removable region: 50
[2025-02-26 14:14:16] 2025-02-26 13:13:36,185 | INFO     | model: linear, x: [1740567519.0, 1740567580.0, 1740567641.0, 1740567702.0, 1740567763.0, 1740567824.0, 1740567885.0, 1740567946.0, 1740568007.0, 1740568068.0, 1740
[2025-02-26 14:14:16] 2025-02-26 13:13:36,185 | INFO     | sum of square deviations: 635130048.0
[2025-02-26 14:14:16] 2025-02-26 13:13:36,185 | INFO     | sum of deviations: -124719380.0
[2025-02-26 14:14:16] 2025-02-26 13:13:36,185 | INFO     | mean x: 1740571362.0
[2025-02-26 14:14:16] 2025-02-26 13:13:36,185 | INFO     | mean y: 2389318.188976378
[2025-02-26 14:14:16] 2025-02-26 13:13:36,185 | INFO     | -- intersect: 344182281.3749908
[2025-02-26 14:14:16] 2025-02-26 13:13:36,185 | INFO     | intersect: 344182281.3749908
[2025-02-26 14:14:16] 2025-02-26 13:13:36,185 | INFO     | chi2: 0.001793919376149249
[2025-02-26 14:14:16] 2025-02-26 13:13:36,185 | INFO     | -- intersect: 344182281.3749908
[2025-02-26 14:14:16] 2025-02-26 13:13:36,185 | INFO     | current memory leak: -0.20 B/s (using 127 data points, chi2=0.00)
[2025-02-26 14:14:16] 2025-02-26 13:13:36,185 | INFO     | ..............................
[2025-02-26 14:14:16] 2025-02-26 13:13:36,185 | INFO     | . Timing measurements:
[2025-02-26 14:14:16] 2025-02-26 13:13:36,185 | INFO     | . get job = 0 s
[2025-02-26 14:14:16] 2025-02-26 13:13:36,185 | INFO     | . initial setup = 1 s
[2025-02-26 14:14:16] 2025-02-26 13:13:36,185 | INFO     | . payload setup = 3 s
[2025-02-26 14:14:16] 2025-02-26 13:13:36,185 | INFO     | . stage-in = 0 s
[2025-02-26 14:14:16] 2025-02-26 13:13:36,185 | INFO     | . payload execution = 11143 s
[2025-02-26 14:14:16] 2025-02-26 13:13:36,186 | INFO     | . stage-out = 0 s
[2025-02-26 14:14:16] 2025-02-26 13:13:36,186 | INFO     | . log creation = 0 s
[2025-02-26 14:14:16] 2025-02-26 13:13:36,186 | INFO     | ..............................
[2025-02-26 14:14:16] 2025-02-26 13:13:36,217 | INFO     | 
[2025-02-26 14:14:16] 2025-02-26 13:13:36,217 | INFO     | job summary report
[2025-02-26 14:14:16] 2025-02-26 13:13:36,217 | INFO     | --------------------------------------------------
[2025-02-26 14:14:16] 2025-02-26 13:13:36,217 | INFO     | PanDA job id: 6522811810
[2025-02-26 14:14:16] 2025-02-26 13:13:36,217 | INFO     | task id: 43205075
[2025-02-26 14:14:16] 2025-02-26 13:13:36,217 | INFO     | errors: (none)
[2025-02-26 14:14:16] 2025-02-26 13:13:36,217 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 14:14:16] 2025-02-26 13:13:36,217 | INFO     | pilot state: finished 
[2025-02-26 14:14:16] 2025-02-26 13:13:36,217 | INFO     | transexitcode: 0
[2025-02-26 14:14:16] 2025-02-26 13:13:36,217 | INFO     | exeerrorcode: 0
[2025-02-26 14:14:16] 2025-02-26 13:13:36,217 | INFO     | exeerrordiag: 
[2025-02-26 14:14:16] 2025-02-26 13:13:36,217 | INFO     | exitcode: 0
[2025-02-26 14:14:16] 2025-02-26 13:13:36,217 | INFO     | exitmsg: OK
[2025-02-26 14:14:16] 2025-02-26 13:13:36,217 | INFO     | cpuconsumptiontime: 31475 s
[2025-02-26 14:14:16] 2025-02-26 13:13:36,218 | INFO     | nevents: 400
[2025-02-26 14:14:16] 2025-02-26 13:13:36,218 | INFO     | neventsw: 0
[2025-02-26 14:14:16] 2025-02-26 13:13:36,218 | INFO     | pid: 892361
[2025-02-26 14:14:16] 2025-02-26 13:13:36,218 | INFO     | pgrp: 892361
[2025-02-26 14:14:16] 2025-02-26 13:13:36,218 | INFO     | corecount: 3
[2025-02-26 14:14:16] 2025-02-26 13:13:36,218 | INFO     | event service: False
[2025-02-26 14:14:16] 2025-02-26 13:13:36,218 | INFO     | sizes: {0: 2363778, 3: 2363984, 11: 2364012, 11150: 2393157, 11151: 2402104, 11152: 2402160, 11154: 2402458}
[2025-02-26 14:14:16] 2025-02-26 13:13:36,218 | INFO     | --------------------------------------------------
[2025-02-26 14:14:16] 2025-02-26 13:13:36,218 | INFO     | 
[2025-02-26 14:14:16] 2025-02-26 13:13:36,218 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 14:14:16] 2025-02-26 13:13:36,232 | INFO     | job 6522811810 has completed (purged errors)
[2025-02-26 14:14:16] 2025-02-26 13:13:36,233 | INFO     | overall cleanup function is called
[2025-02-26 14:14:16] 2025-02-26 13:13:37,239 | INFO     | --- collectZombieJob: --- 10, [892361]
[2025-02-26 14:14:16] 2025-02-26 13:13:37,239 | INFO     | zombie collector waiting for pid 892361
[2025-02-26 14:14:16] 2025-02-26 13:13:37,239 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 14:14:16] 2025-02-26 13:13:37,240 | INFO     | collected zombie processes
[2025-02-26 14:14:16] 2025-02-26 13:13:37,240 | INFO     | will attempt to kill all subprocesses of pid=892361
[2025-02-26 14:14:16] 2025-02-26 13:13:37,302 | INFO     | process IDs to be killed: [892361] (in reverse order)
[2025-02-26 14:14:16] 2025-02-26 13:13:37,331 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 14:14:16] 2025-02-26 13:13:37,332 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 14:14:16] 2025-02-26 13:13:37,333 | INFO     | did not find any defunct processes belonging to 892361
[2025-02-26 14:14:16] 2025-02-26 13:13:37,335 | INFO     | did not find any defunct processes belonging to 892361
[2025-02-26 14:14:16] 2025-02-26 13:13:37,335 | INFO     | ready for new job
[2025-02-26 14:14:16] 2025-02-26 13:13:37,335 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 14:14:16] 2025-02-26 13:13:37,336 | INFO     | **************************************
[2025-02-26 14:14:16] 2025-02-26 13:13:37,336 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 14:14:16] 2025-02-26 13:13:37,336 | INFO     | **************************************
[2025-02-26 14:14:16] 2025-02-26 13:13:37,336 | INFO     | 
[2025-02-26 14:14:16] 2025-02-26 13:13:37,336 | INFO     | architecture information:
[2025-02-26 14:14:16] 2025-02-26 13:13:37,336 | INFO     | executing command: cat /etc/os-release
[2025-02-26 14:14:16] 2025-02-26 13:13:37,346 | INFO     | cat /etc/os-release:
[2025-02-26 14:14:16] NAME="CentOS Linux"
[2025-02-26 14:14:16] VERSION="7 (Core)"
[2025-02-26 14:14:16] ID="centos"
[2025-02-26 14:14:16] ID_LIKE="rhel fedora"
[2025-02-26 14:14:16] VERSION_ID="7"
[2025-02-26 14:14:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 14:14:16] ANSI_COLOR="0;31"
[2025-02-26 14:14:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 14:14:16] HOME_URL="https://www.centos.org/"
[2025-02-26 14:14:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 14:14:16] 
[2025-02-26 14:14:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 14:14:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 14:14:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 14:14:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 14:14:16] 
[2025-02-26 14:14:16] 2025-02-26 13:13:37,346 | INFO     | **************************************
[2025-02-26 14:14:16] 2025-02-26 13:13:37,849 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-02-26 14:14:16] 2025-02-26 13:13:37,862 | INFO     | sufficient remaining disk space (397904183296 B)
[2025-02-26 14:14:16] 2025-02-26 13:13:37,863 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 14:14:16] 2025-02-26 13:13:37,863 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 14:14:16] 2025-02-26 13:13:37,863 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-26 14:14:16] 2025-02-26 13:13:37,863 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 14:14:16] 2025-02-26 13:13:37,863 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 14:14:16] 2025-02-26 13:13:37,863 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 14:14:16] 2025-02-26 13:13:37,863 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 14:14:16] 2025-02-26 13:13:37,973 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-26 14:14:16] 2025-02-26 13:13:37,973 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-26 14:14:16] 2025-02-26 13:13:37,973 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 14:14:16] 2025-02-26 13:13:37,974 | INFO     | will abort loop
[2025-02-26 14:14:16] 2025-02-26 13:13:38,128 | INFO     | all data control threads have been joined
[2025-02-26 14:14:16] 2025-02-26 13:13:38,287 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 14:14:16] 2025-02-26 13:13:38,868 | INFO     | [job] retrieve thread has finished
[2025-02-26 14:14:16] 2025-02-26 13:13:38,869 | INFO     | [job] queue monitor thread has finished
[2025-02-26 14:14:16] 2025-02-26 13:13:38,965 | INFO     | job.realtimelogging is not enabled
[2025-02-26 14:14:16] 2025-02-26 13:13:38,979 | INFO     | [job] job monitor thread has finished
[2025-02-26 14:14:16] 2025-02-26 13:13:39,025 | INFO     | all payload control threads have been joined
[2025-02-26 14:14:16] 2025-02-26 13:13:39,071 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 14:14:16] 2025-02-26 13:13:39,134 | INFO     | [data] control thread has finished
[2025-02-26 14:14:16] 2025-02-26 13:13:39,336 | INFO     | all job control threads have been joined
[2025-02-26 14:14:16] 2025-02-26 13:13:39,504 | INFO     | [payload] validate_post thread has finished
[2025-02-26 14:14:16] 2025-02-26 13:13:39,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 14:14:16] 2025-02-26 13:13:39,853 | INFO     | [payload] failed_post thread has finished
[2025-02-26 14:14:16] 2025-02-26 13:13:39,888 | INFO     | [data] copytool_in thread has finished
[2025-02-26 14:14:16] 2025-02-26 13:13:39,971 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 14:14:16] 2025-02-26 13:13:40,028 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 14:14:16] 2025-02-26 13:13:40,031 | INFO     | [payload] control thread has finished
[2025-02-26 14:14:16] 2025-02-26 13:13:40,049 | INFO     | [job] validate thread has finished
[2025-02-26 14:14:16] 2025-02-26 13:13:40,099 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 14:14:16] 2025-02-26 13:13:40,293 | INFO     | [data] copytool_out thread has finished
[2025-02-26 14:14:16] 2025-02-26 13:13:40,341 | INFO     | [job] control thread has finished
[2025-02-26 14:14:16] 2025-02-26 13:13:43,664 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 14:14:16] 2025-02-26 13:13:45,146 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140509682956096)>', '<ExcThread(monitor, started 140508814882560)>']
[2025-02-26 14:14:16] 2025-02-26 13:13:45,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 14:14:16] 2025-02-26 13:13:45,906 | INFO     | [monitor] control thread has ended
[2025-02-26 14:14:16] 2025-02-26 13:13:50,171 | INFO     | all workflow threads have been joined
[2025-02-26 14:14:16] 2025-02-26 13:13:50,172 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 14:14:16] 2025-02-26 13:13:50,172 | INFO     | traces error code: 0
[2025-02-26 14:14:16] 2025-02-26 13:13:50,172 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 14:14:16] 2025-02-26 13:13:50,224 [wrapper] ==== pilot stdout END ====
[2025-02-26 14:14:16] 2025-02-26 13:13:50,227 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 14:14:16] 2025-02-26 13:13:50,229 [wrapper] pilotpid: 885802
[2025-02-26 14:14:16] 2025-02-26 13:13:50,232 [wrapper] Pilot exit status: 0
[2025-02-26 14:14:16] 2025-02-26 13:13:50,240 [wrapper] pandaids: 6522811810
[2025-02-26 14:14:16] 2025-02-26 13:13:50,260 [wrapper] cleanup supervisor_pilot  977141 885803
[2025-02-26 14:14:16] 2025-02-26 13:13:50,262 [wrapper] Test setup, not cleaning
[2025-02-26 14:14:16] 2025-02-26 13:13:50,267 [wrapper] apfmon messages muted
[2025-02-26 14:14:16] 2025-02-26 13:13:50,270 [wrapper] ==== wrapper stdout END ====
[2025-02-26 14:14:16] 2025-02-26 13:13:50,272 [wrapper] ==== wrapper stderr END ====
[2025-02-26 14:14:16]  *** Error codes and diagnostics ***
[2025-02-26 14:14:16]     "exeErrorCode": 0,
[2025-02-26 14:14:16]     "exeErrorDiag": "",
[2025-02-26 14:14:16]     "pilotErrorCode": 0,
[2025-02-26 14:14:16]     "pilotErrorDiag": "",
[2025-02-26 14:14:16]  *** Listing of results directory ***
[2025-02-26 14:14:16] total 658848
[2025-02-26 14:14:16] -rw-r--r-- 1 boinc boinc    491065 Feb 22 08:11 pilot3.tar.gz
[2025-02-26 14:14:16] -rw-r--r-- 1 boinc boinc      5118 Feb 22 08:22 queuedata.json
[2025-02-26 14:14:16] -rwx------ 1 boinc boinc     35865 Feb 22 08:22 runpilot2-wrapper.sh
[2025-02-26 14:14:16] -rw-r--r-- 1 boinc boinc       100 Feb 26 11:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 14:14:16] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 11:07 run_atlas
[2025-02-26 14:14:16] -rw-r--r-- 1 boinc boinc       105 Feb 26 11:07 job.xml
[2025-02-26 14:14:16] -rw-r--r-- 2 boinc boinc 342553023 Feb 26 11:07 EVNT.43092757._000897.pool.root.1
[2025-02-26 14:14:16] -rw-r--r-- 1 boinc boinc      6933 Feb 26 11:07 init_data.xml
[2025-02-26 14:14:16] drwxrwx--x 2 boinc boinc      4096 Feb 26 11:07 shared
[2025-02-26 14:14:16] -rw-r--r-- 2 boinc boinc    503561 Feb 26 11:07 input.tar.gz
[2025-02-26 14:14:16] -rw-r--r-- 2 boinc boinc     17569 Feb 26 11:07 start_atlas.sh
[2025-02-26 14:14:16] -rw-r--r-- 1 boinc boinc         0 Feb 26 11:07 boinc_lockfile
[2025-02-26 14:14:16] -rw-r--r-- 1 boinc boinc      2554 Feb 26 11:07 pandaJob.out
[2025-02-26 14:14:16] -rw------- 1 boinc boinc       424 Feb 26 11:07 setup.sh.local
[2025-02-26 14:14:16] -rw------- 1 boinc boinc    990040 Feb 26 11:07 agis_schedconf.cvmfs.json
[2025-02-26 14:14:16] drwx------ 4 boinc boinc      4096 Feb 26 11:07 pilot3
[2025-02-26 14:14:16] -rw------- 1 boinc boinc 325438871 Feb 26 14:13 HITS.43205075._058364.pool.root.1
[2025-02-26 14:14:16] -rw-r--r-- 1 boinc boinc       531 Feb 26 14:13 boinc_task_state.xml
[2025-02-26 14:14:16] -rw------- 1 boinc boinc      1019 Feb 26 14:13 memory_monitor_summary.json
[2025-02-26 14:14:16] -rw------- 1 boinc boinc   1569202 Feb 26 14:13 agis_ddmendpoints.agis.ALL.json
[2025-02-26 14:14:16] -rw------- 1 boinc boinc    295715 Feb 26 14:13 log.43205075._058364.job.log.tgz.1
[2025-02-26 14:14:16] -rw------- 1 boinc boinc        95 Feb 26 14:13 pilot_heartbeat.json
[2025-02-26 14:14:16] -rw------- 1 boinc boinc      7679 Feb 26 14:13 heartbeat.json
[2025-02-26 14:14:16] -rw------- 1 boinc boinc      4600 Feb 26 14:13 pilotlog.txt
[2025-02-26 14:14:16] -rw------- 1 boinc boinc   1141974 Feb 26 14:13 log.43205075._058364.job.log.1
[2025-02-26 14:14:16] -rw------- 1 boinc boinc       357 Feb 26 14:13 output.list
[2025-02-26 14:14:16] -rw-r--r-- 1 boinc boinc       620 Feb 26 14:13 runtime_log
[2025-02-26 14:14:16] -rw------- 1 boinc boinc   1454080 Feb 26 14:13 result.tar.gz
[2025-02-26 14:14:16] -rw-r--r-- 1 boinc boinc     11125 Feb 26 14:13 runtime_log.err
[2025-02-26 14:14:16] -rw------- 1 boinc boinc       668 Feb 26 14:13 M59LDmc1y56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmDftKDmbCnQRm.diag
[2025-02-26 14:14:16] -rw-r--r-- 1 boinc boinc      8192 Feb 26 14:14 boinc_mmap_file
[2025-02-26 14:14:16] -rw-r--r-- 1 boinc boinc        28 Feb 26 14:14 wrapper_checkpoint.txt
[2025-02-26 14:14:16] -rw-r--r-- 1 boinc boinc     21602 Feb 26 14:14 stderr.txt
[2025-02-26 14:14:16] HITS file was successfully produced:
[2025-02-26 14:14:16] -rw------- 1 boinc boinc 325438871 Feb 26 14:13 shared/HITS.pool.root.1
[2025-02-26 14:14:16]  *** Contents of shared directory: ***
[2025-02-26 14:14:16] total 654280
[2025-02-26 14:14:16] -rw-r--r-- 2 boinc boinc 342553023 Feb 26 11:07 ATLAS.root_0
[2025-02-26 14:14:16] -rw-r--r-- 2 boinc boinc    503561 Feb 26 11:07 input.tar.gz
[2025-02-26 14:14:16] -rw-r--r-- 2 boinc boinc     17569 Feb 26 11:07 start_atlas.sh
[2025-02-26 14:14:16] -rw------- 1 boinc boinc 325438871 Feb 26 14:13 HITS.pool.root.1
[2025-02-26 14:14:16] -rw------- 1 boinc boinc   1454080 Feb 26 14:13 result.tar.gz
14:14:18 (882125): run_atlas exited; CPU time 31429.712329
14:14:18 (882125): called boinc_finish(0)

</stderr_txt>
]]>

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