Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:24:55 (797024): wrapper (7.7.26015): starting
23:24:55 (797024): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 23:24:55] Arguments: --nthreads 12
[2025-02-25 23:24:55] Threads: 12
[2025-02-25 23:24:55] Checking for CVMFS
[2025-02-25 23:24:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 23:24:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 23:24:55] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 23:24:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 23:24:56] 2.11.5.0 1229880 32996 233196 143065 1 642 45151673 45568000 7937 130560 0 179155824 99.675 185677517 25995 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-02-25 23:24:56] CVMFS is ok
[2025-02-25 23:24:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 23:24:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 23:24:56] Further information can be found at the LHC@home message board.
[2025-02-25 23:24:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 23:24:56] Checking for apptainer binary...
[2025-02-25 23:24:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 23:24:56] Running /usr/bin/apptainer --version
[2025-02-25 23:24:56] apptainer version 1.3.5-1.el9
[2025-02-25 23:24:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 23:24:56] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0087.triumf.lcg
[2025-02-25 23:24:56] apptainer works
[2025-02-25 23:24:56] Set ATHENA_PROC_NUMBER=12
[2025-02-25 23:24:56] Set ATHENA_CORE_NUMBER=12
[2025-02-25 23:24:56] Starting ATLAS job with PandaID=6522812032
[2025-02-25 23:24:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 01:01:11]  *** The last 200 lines of the pilot log: ***
[2025-02-26 01:01:11]  is_altstaged=None
[2025-02-26 01:01:11]  is_tar=False
[2025-02-26 01:01:11]  lfn=log.43205075._058440.job.log.tgz.1
[2025-02-26 01:01:11]  mtime=0
[2025-02-26 01:01:11]  protocol_id=None
[2025-02-26 01:01:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-26 01:01:11]  replicas=None
[2025-02-26 01:01:11]  scope=mc23_13p6TeV
[2025-02-26 01:01:11]  status=None
[2025-02-26 01:01:11]  status_code=0
[2025-02-26 01:01:11]  storage_token=
[2025-02-26 01:01:11]  surl=/home/boinc/slots/0/PanDA_Pilot-6522812032/log.43205075._058440.job.log.tgz.1
[2025-02-26 01:01:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/61/log.43205075._058440.job.log.tgz.1
[2025-02-26 01:01:11]  workdir=None
[2025-02-26 01:01:11] ]
[2025-02-26 01:01:11] 2025-02-26 09:00:45,083 | INFO     | transferring file log.43205075._058440.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6522812032/log.43205075._058440.job.log.tgz.1 to /home/boinc/slots/0/log.
[2025-02-26 01:01:11] 2025-02-26 09:00:45,083 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6522812032/log.43205075._058440.job.log.tgz.1 /home/boinc/slots/0/log.43205075._058440.job.log.t
[2025-02-26 01:01:11] 2025-02-26 09:00:45,096 | INFO     | adding to output.list: log.43205075._058440.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/61/log.43205075._058440.job.log.tg
[2025-02-26 01:01:11] 2025-02-26 09:00:45,096 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-26 01:01:11] 2025-02-26 09:00:45,096 | INFO     | summary of transferred files:
[2025-02-26 01:01:11] 2025-02-26 09:00:45,096 | INFO     |  -- lfn=log.43205075._058440.job.log.tgz.1, status_code=0, status=transferred
[2025-02-26 01:01:11] 2025-02-26 09:00:45,097 | INFO     | stage-out finished correctly
[2025-02-26 01:01:11] 2025-02-26 09:00:45,467 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-26 01:01:11] 2025-02-26 09:00:45,991 | INFO     | PID=800620 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-02-26 01:01:11] 2025-02-26 09:00:45,991 | INFO     | .. there are 14 such processes running
[2025-02-26 01:01:11] 2025-02-26 09:00:48,300 | INFO     | job 6522812032 has state=finished
[2025-02-26 01:01:11] 2025-02-26 09:00:48,300 | INFO     | preparing for final server update for job 6522812032 in state='finished'
[2025-02-26 01:01:11] 2025-02-26 09:00:48,300 | INFO     | this job has now completed (state=finished)
[2025-02-26 01:01:11] 2025-02-26 09:00:48,300 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-26 01:01:11] 2025-02-26 09:00:48,300 | INFO     | log transfer has been attempted: DONE
[2025-02-26 01:01:11] 2025-02-26 09:00:48,301 | INFO     | job 6522812032 has finished - writing final server update
[2025-02-26 01:01:11] 2025-02-26 09:00:48,301 | INFO     | total number of processed events: 400 (read)
[2025-02-26 01:01:11] 2025-02-26 09:00:48,303 | INFO     | executing command: lscpu
[2025-02-26 01:01:11] 2025-02-26 09:00:48,335 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2025-02-26 01:01:11] 2025-02-26 09:00:48,349 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-26 01:01:11] 2025-02-26 09:00:50,756 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-26 01:01:11] 2025-02-26 09:00:50,757 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6522812032/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 01:01:11] 2025-02-26 09:00:50,761 | INFO     | extracted standard info from prmon json
[2025-02-26 01:01:11] 2025-02-26 09:00:50,762 | INFO     | extracted standard memory fields from prmon json
[2025-02-26 01:01:11] 2025-02-26 09:00:50,762 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-26 01:01:11] 2025-02-26 09:00:50,762 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-26 01:01:11] 2025-02-26 09:00:50,762 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-26 01:01:11] 2025-02-26 09:00:50,764 | INFO     | fitting pss+swap vs Time
[2025-02-26 01:01:11] 2025-02-26 09:00:50,764 | INFO     | model: linear, x: [1740555029.0, 1740555090.0, 1740555151.0, 1740555212.0, 1740555273.0, 1740555334.0, 1740555395.0, 1740555456.0, 1740555517.0, 1740555578.0, 1740
[2025-02-26 01:01:11] 2025-02-26 09:00:50,764 | INFO     | sum of square deviations: 204163828.0
[2025-02-26 01:01:11] 2025-02-26 09:00:50,764 | INFO     | sum of deviations: 31205463963.0
[2025-02-26 01:01:11] 2025-02-26 09:00:50,764 | INFO     | mean x: 1740557652.0
[2025-02-26 01:01:11] 2025-02-26 09:00:50,764 | INFO     | mean y: 2715953.8505747127
[2025-02-26 01:01:11] 2025-02-26 09:00:50,765 | INFO     | -- intersect: -266033190685.84027
[2025-02-26 01:01:11] 2025-02-26 09:00:50,765 | INFO     | intersect: -266033190685.84027
[2025-02-26 01:01:11] 2025-02-26 09:00:50,765 | INFO     | chi2: 2.839117166849292
[2025-02-26 01:01:11] 2025-02-26 09:00:50,765 | INFO     | -- intersect: -266033190685.84027
[2025-02-26 01:01:11] 2025-02-26 09:00:50,765 | INFO     | current memory leak: 152.85 B/s (using 87 data points, chi2=2.84)
[2025-02-26 01:01:11] 2025-02-26 09:00:50,765 | INFO     | ..............................
[2025-02-26 01:01:11] 2025-02-26 09:00:50,765 | INFO     | . Timing measurements:
[2025-02-26 01:01:11] 2025-02-26 09:00:50,765 | INFO     | . get job = 0 s
[2025-02-26 01:01:11] 2025-02-26 09:00:50,765 | INFO     | . initial setup = 2 s
[2025-02-26 01:01:11] 2025-02-26 09:00:50,765 | INFO     | . payload setup = 3 s
[2025-02-26 01:01:11] 2025-02-26 09:00:50,765 | INFO     | . stage-in = 0 s
[2025-02-26 01:01:11] 2025-02-26 09:00:50,765 | INFO     | . payload execution = 5720 s
[2025-02-26 01:01:11] 2025-02-26 09:00:50,765 | INFO     | . stage-out = 0 s
[2025-02-26 01:01:11] 2025-02-26 09:00:50,766 | INFO     | . log creation = 0 s
[2025-02-26 01:01:11] 2025-02-26 09:00:50,766 | INFO     | ..............................
[2025-02-26 01:01:11] 2025-02-26 09:00:50,818 | INFO     | 
[2025-02-26 01:01:11] 2025-02-26 09:00:50,818 | INFO     | job summary report
[2025-02-26 01:01:11] 2025-02-26 09:00:50,818 | INFO     | --------------------------------------------------
[2025-02-26 01:01:11] 2025-02-26 09:00:50,821 | WARNING  | process 806989 can no longer be monitored (due to stat problems) - aborting
[2025-02-26 01:01:11] 2025-02-26 09:00:50,822 | INFO     | PanDA job id: 6522812032
[2025-02-26 01:01:11] 2025-02-26 09:00:50,822 | INFO     | task id: 43205075
[2025-02-26 01:01:11] 2025-02-26 09:00:50,822 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6522812032/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 01:01:11] 2025-02-26 09:00:50,822 | INFO     | errors: (none)
[2025-02-26 01:01:11] 2025-02-26 09:00:50,822 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 01:01:11] 2025-02-26 09:00:50,822 | INFO     | pilot state: finished 
[2025-02-26 01:01:11] 2025-02-26 09:00:50,823 | INFO     | transexitcode: 0
[2025-02-26 01:01:11] 2025-02-26 09:00:50,823 | INFO     | exeerrorcode: 0
[2025-02-26 01:01:11] 2025-02-26 09:00:50,826 | INFO     | exeerrordiag: 
[2025-02-26 01:01:11] 2025-02-26 09:00:50,826 | INFO     | exitcode: 0
[2025-02-26 01:01:11] 2025-02-26 09:00:50,826 | INFO     | exitmsg: OK
[2025-02-26 01:01:11] 2025-02-26 09:00:50,826 | INFO     | cpuconsumptiontime: 55818 s
[2025-02-26 01:01:11] 2025-02-26 09:00:50,826 | INFO     | nevents: 400
[2025-02-26 01:01:11] 2025-02-26 09:00:50,826 | INFO     | neventsw: 0
[2025-02-26 01:01:11] 2025-02-26 09:00:50,826 | INFO     | pid: 806989
[2025-02-26 01:01:11] 2025-02-26 09:00:50,826 | INFO     | pgrp: 806989
[2025-02-26 01:01:11] 2025-02-26 09:00:50,826 | INFO     | corecount: 12
[2025-02-26 01:01:11] 2025-02-26 09:00:50,827 | INFO     | event service: False
[2025-02-26 01:01:11] 2025-02-26 09:00:50,827 | INFO     | sizes: {0: 2369517, 1: 2370370, 3: 2370576, 11: 2370604, 5727: 2397250, 5728: 2406369, 5734: 2406483}
[2025-02-26 01:01:11] 2025-02-26 09:00:50,827 | INFO     | --------------------------------------------------
[2025-02-26 01:01:11] 2025-02-26 09:00:50,827 | INFO     | 
[2025-02-26 01:01:11] 2025-02-26 09:00:50,827 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-02-26 01:01:11] 2025-02-26 09:00:50,839 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 01:01:11] 2025-02-26 09:00:50,840 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 01:01:11] 2025-02-26 09:00:50,840 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 01:01:11] 2025-02-26 09:00:50,840 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 01:01:11] 2025-02-26 09:00:50,840 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 01:01:11] 2025-02-26 09:00:50,840 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 01:01:11] 2025-02-26 09:00:50,840 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 01:01:11] 2025-02-26 09:00:50,840 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 01:01:11] 2025-02-26 09:00:50,840 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 01:01:11] 2025-02-26 09:00:50,840 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 01:01:11] 2025-02-26 09:00:50,840 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 01:01:11] 2025-02-26 09:00:50,840 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 01:01:11] 2025-02-26 09:00:50,840 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 01:01:11] 2025-02-26 09:00:50,840 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 01:01:11] 2025-02-26 09:00:50,840 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 01:01:11] 2025-02-26 09:00:50,840 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 01:01:11] 2025-02-26 09:00:50,840 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 01:01:11] 2025-02-26 09:00:50,840 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 01:01:11] 2025-02-26 09:00:50,841 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 01:01:11] 2025-02-26 09:00:50,841 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 01:01:11] 2025-02-26 09:00:50,841 | INFO     | job 6522812032 has completed (purged errors)
[2025-02-26 01:01:11] 2025-02-26 09:00:50,841 | INFO     | overall cleanup function is called
[2025-02-26 01:01:11] 2025-02-26 09:00:50,886 | INFO     | number of running child processes to parent process 806989: 1
[2025-02-26 01:01:11] 2025-02-26 09:00:50,886 | INFO     | maximum number of monitored processes: 6
[2025-02-26 01:01:11] 2025-02-26 09:00:50,886 | INFO     | aborting job monitoring since job object (job id=6522812032) has expired
[2025-02-26 01:01:11] 2025-02-26 09:00:51,847 | INFO     | --- collectZombieJob: --- 10, [806989]
[2025-02-26 01:01:11] 2025-02-26 09:00:51,847 | INFO     | zombie collector waiting for pid 806989
[2025-02-26 01:01:11] 2025-02-26 09:00:51,847 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 01:01:11] 2025-02-26 09:00:51,848 | INFO     | collected zombie processes
[2025-02-26 01:01:11] 2025-02-26 09:00:51,848 | INFO     | will attempt to kill all subprocesses of pid=806989
[2025-02-26 01:01:11] 2025-02-26 09:00:51,914 | INFO     | process IDs to be killed: [806989] (in reverse order)
[2025-02-26 01:01:11] 2025-02-26 09:00:51,966 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 01:01:11] 2025-02-26 09:00:51,967 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 01:01:11] 2025-02-26 09:00:51,972 | INFO     | did not find any defunct processes belonging to 806989
[2025-02-26 01:01:11] 2025-02-26 09:00:51,976 | INFO     | did not find any defunct processes belonging to 806989
[2025-02-26 01:01:11] 2025-02-26 09:00:51,976 | INFO     | ready for new job
[2025-02-26 01:01:11] 2025-02-26 09:00:51,976 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 01:01:11] 2025-02-26 09:00:51,977 | INFO     | **************************************
[2025-02-26 01:01:11] 2025-02-26 09:00:51,977 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 01:01:11] 2025-02-26 09:00:51,977 | INFO     | **************************************
[2025-02-26 01:01:11] 2025-02-26 09:00:51,977 | INFO     | 
[2025-02-26 01:01:11] 2025-02-26 09:00:51,979 | INFO     | architecture information:
[2025-02-26 01:01:11] 2025-02-26 09:00:51,979 | INFO     | executing command: cat /etc/os-release
[2025-02-26 01:01:11] 2025-02-26 09:00:51,988 | INFO     | cat /etc/os-release:
[2025-02-26 01:01:11] NAME="CentOS Linux"
[2025-02-26 01:01:11] VERSION="7 (Core)"
[2025-02-26 01:01:11] ID="centos"
[2025-02-26 01:01:11] ID_LIKE="rhel fedora"
[2025-02-26 01:01:11] VERSION_ID="7"
[2025-02-26 01:01:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 01:01:11] ANSI_COLOR="0;31"
[2025-02-26 01:01:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 01:01:11] HOME_URL="https://www.centos.org/"
[2025-02-26 01:01:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 01:01:11] 
[2025-02-26 01:01:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 01:01:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 01:01:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 01:01:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 01:01:11] 
[2025-02-26 01:01:11] 2025-02-26 09:00:51,988 | INFO     | **************************************
[2025-02-26 01:01:11] 2025-02-26 09:00:52,490 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-02-26 01:01:11] 2025-02-26 09:00:52,500 | INFO     | sufficient remaining disk space (2168492916736 B)
[2025-02-26 01:01:11] 2025-02-26 09:00:52,500 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 01:01:11] 2025-02-26 09:00:52,500 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 01:01:11] 2025-02-26 09:00:52,501 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 01:01:11] 2025-02-26 09:00:52,501 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 01:01:11] 2025-02-26 09:00:52,501 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 01:01:11] 2025-02-26 09:00:52,501 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-26 01:01:11] 2025-02-26 09:00:52,502 | INFO     | aborting loop
[2025-02-26 01:01:11] 2025-02-26 09:00:52,502 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 01:01:11] 2025-02-26 09:00:52,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 01:01:11] 2025-02-26 09:00:52,502 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 01:01:11] 2025-02-26 09:00:52,711 | INFO     | all data control threads have been joined
[2025-02-26 01:01:11] 2025-02-26 09:00:53,159 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 01:01:11] 2025-02-26 09:00:53,460 | INFO     | all payload control threads have been joined
[2025-02-26 01:01:11] 2025-02-26 09:00:53,505 | INFO     | [job] retrieve thread has finished
[2025-02-26 01:01:11] 2025-02-26 09:00:53,506 | INFO     | [job] queue monitor thread has finished
[2025-02-26 01:01:11] 2025-02-26 09:00:53,507 | INFO     | [job] job monitor thread has finished
[2025-02-26 01:01:11] 2025-02-26 09:00:53,600 | INFO     | [data] copytool_in thread has finished
[2025-02-26 01:01:11] 2025-02-26 09:00:53,651 | INFO     | [job] validate thread has finished
[2025-02-26 01:01:11] 2025-02-26 09:00:53,654 | INFO     | [payload] failed_post thread has finished
[2025-02-26 01:01:11] 2025-02-26 09:00:53,713 | INFO     | [data] control thread has finished
[2025-02-26 01:01:11] 2025-02-26 09:00:53,796 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 01:01:11] 2025-02-26 09:00:54,008 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 01:01:11] 2025-02-26 09:00:54,074 | INFO     | all job control threads have been joined
[2025-02-26 01:01:11] 2025-02-26 09:00:54,208 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 01:01:11] 2025-02-26 09:00:54,446 | INFO     | [payload] validate_post thread has finished
[2025-02-26 01:01:11] 2025-02-26 09:00:54,466 | INFO     | [payload] control thread has finished
[2025-02-26 01:01:11] 2025-02-26 09:00:55,075 | INFO     | [job] control thread has finished
[2025-02-26 01:01:11] 2025-02-26 09:00:55,165 | INFO     | [data] copytool_out thread has finished
[2025-02-26 01:01:11] 2025-02-26 09:00:56,503 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 01:01:11] 2025-02-26 09:01:03,089 | INFO     | job.realtimelogging is not enabled
[2025-02-26 01:01:11] 2025-02-26 09:01:04,095 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 01:01:11] 2025-02-26 09:01:06,121 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140490258843456)>', '<ExcThread(monitor, started 140489934210816)>']
[2025-02-26 01:01:11] 2025-02-26 09:01:06,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 01:01:11] 2025-02-26 09:01:06,564 | INFO     | [monitor] control thread has ended
[2025-02-26 01:01:11] 2025-02-26 09:01:11,146 | INFO     | all workflow threads have been joined
[2025-02-26 01:01:11] 2025-02-26 09:01:11,147 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 01:01:11] 2025-02-26 09:01:11,147 | INFO     | traces error code: 0
[2025-02-26 01:01:11] 2025-02-26 09:01:11,147 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 01:01:11] 2025-02-26 09:01:11,232 [wrapper] ==== pilot stdout END ====
[2025-02-26 01:01:11] 2025-02-26 09:01:11,234 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 01:01:11] 2025-02-26 09:01:11,236 [wrapper] pilotpid: 800620
[2025-02-26 01:01:11] 2025-02-26 09:01:11,237 [wrapper] Pilot exit status: 0
[2025-02-26 01:01:11] 2025-02-26 09:01:11,244 [wrapper] pandaids: 6522812032
[2025-02-26 01:01:11] 2025-02-26 09:01:11,278 [wrapper] cleanup supervisor_pilot 1025798 800621
[2025-02-26 01:01:11] 2025-02-26 09:01:11,279 [wrapper] Test setup, not cleaning
[2025-02-26 01:01:11] 2025-02-26 09:01:11,283 [wrapper] apfmon messages muted
[2025-02-26 01:01:11] 2025-02-26 09:01:11,284 [wrapper] ==== wrapper stdout END ====
[2025-02-26 01:01:11] 2025-02-26 09:01:11,286 [wrapper] ==== wrapper stderr END ====
[2025-02-26 01:01:11]  *** Error codes and diagnostics ***
[2025-02-26 01:01:11]     "exeErrorCode": 0,
[2025-02-26 01:01:11]     "exeErrorDiag": "",
[2025-02-26 01:01:11]     "pilotErrorCode": 0,
[2025-02-26 01:01:11]     "pilotErrorDiag": "",
[2025-02-26 01:01:11]  *** Listing of results directory ***
[2025-02-26 01:01:11] total 658976
[2025-02-26 01:01:11] -rw-r--r--. 1 boinc boinc    491065 Feb 21 23:44 pilot3.tar.gz
[2025-02-26 01:01:11] -rw-r--r--. 1 boinc boinc      5118 Feb 21 23:46 queuedata.json
[2025-02-26 01:01:11] -rwx------. 1 boinc boinc     35865 Feb 21 23:46 runpilot2-wrapper.sh
[2025-02-26 01:01:11] -rw-r--r--. 1 boinc boinc       100 Feb 25 23:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 01:01:11] -rwxr-xr-x. 1 boinc boinc      7986 Feb 25 23:24 run_atlas
[2025-02-26 01:01:11] -rw-r--r--. 1 boinc boinc       105 Feb 25 23:24 job.xml
[2025-02-26 01:01:11] -rw-r--r--. 2 boinc boinc 343032254 Feb 25 23:24 EVNT.43092757._001059.pool.root.1
[2025-02-26 01:01:11] -rw-r--r--. 1 boinc boinc      6604 Feb 25 23:24 init_data.xml
[2025-02-26 01:01:11] -rw-r--r--. 2 boinc boinc     17569 Feb 25 23:24 start_atlas.sh
[2025-02-26 01:01:11] drwxrwx--x. 2 boinc boinc      4096 Feb 25 23:24 shared
[2025-02-26 01:01:11] -rw-r--r--. 2 boinc boinc    503562 Feb 25 23:24 input.tar.gz
[2025-02-26 01:01:11] -rw-r--r--. 1 boinc boinc         0 Feb 25 23:24 boinc_lockfile
[2025-02-26 01:01:11] -rw-r--r--. 1 boinc boinc      2555 Feb 25 23:24 pandaJob.out
[2025-02-26 01:01:11] -rw-------. 1 boinc boinc       424 Feb 25 23:24 setup.sh.local
[2025-02-26 01:01:11] -rw-------. 1 boinc boinc    987490 Feb 25 23:25 agis_schedconf.cvmfs.json
[2025-02-26 01:01:11] -rw-------. 1 boinc boinc   1573632 Feb 25 23:25 agis_ddmendpoints.agis.ALL.json
[2025-02-26 01:01:11] drwx------. 4 boinc boinc      4096 Feb 25 23:25 pilot3
[2025-02-26 01:01:11] -rw-------. 1 boinc boinc 326051017 Feb 26 01:00 HITS.43205075._058440.pool.root.1
[2025-02-26 01:01:11] -rw-------. 1 boinc boinc        95 Feb 26 01:00 pilot_heartbeat.json
[2025-02-26 01:01:11] -rw-r--r--. 1 boinc boinc       531 Feb 26 01:00 boinc_task_state.xml
[2025-02-26 01:01:11] -rw-------. 1 boinc boinc      1041 Feb 26 01:00 memory_monitor_summary.json
[2025-02-26 01:01:11] -rw-------. 1 boinc boinc    384004 Feb 26 01:00 log.43205075._058440.job.log.tgz.1
[2025-02-26 01:01:11] -rw-r--r--. 1 boinc boinc      8192 Feb 26 01:00 boinc_mmap_file
[2025-02-26 01:01:11] -rw-r--r--. 1 boinc boinc        27 Feb 26 01:00 wrapper_checkpoint.txt
[2025-02-26 01:01:11] -rw-------. 1 boinc boinc      7748 Feb 26 01:00 heartbeat.json
[2025-02-26 01:01:11] -rw-------. 1 boinc boinc      4409 Feb 26 01:01 pilotlog.txt
[2025-02-26 01:01:11] -rw-------. 1 boinc boinc    567112 Feb 26 01:01 log.43205075._058440.job.log.1
[2025-02-26 01:01:11] -rw-------. 1 boinc boinc       357 Feb 26 01:01 output.list
[2025-02-26 01:01:11] -rw-r--r--. 1 boinc boinc       620 Feb 26 01:01 runtime_log
[2025-02-26 01:01:11] -rw-------. 1 boinc boinc    972800 Feb 26 01:01 result.tar.gz
[2025-02-26 01:01:11] -rw-------. 1 boinc boinc       657 Feb 26 01:01 ZKtLDmfOz56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmN4dKDmaAFIRo.diag
[2025-02-26 01:01:11] -rw-r--r--. 1 boinc boinc     11144 Feb 26 01:01 runtime_log.err
[2025-02-26 01:01:11] -rw-r--r--. 1 boinc boinc     21773 Feb 26 01:01 stderr.txt
[2025-02-26 01:01:11] HITS file was successfully produced:
[2025-02-26 01:01:11] -rw-------. 1 boinc boinc 326051017 Feb 26 01:00 shared/HITS.pool.root.1
[2025-02-26 01:01:11]  *** Contents of shared directory: ***
[2025-02-26 01:01:11] total 654880
[2025-02-26 01:01:11] -rw-r--r--. 2 boinc boinc 343032254 Feb 25 23:24 ATLAS.root_0
[2025-02-26 01:01:11] -rw-r--r--. 2 boinc boinc     17569 Feb 25 23:24 start_atlas.sh
[2025-02-26 01:01:11] -rw-r--r--. 2 boinc boinc    503562 Feb 25 23:24 input.tar.gz
[2025-02-26 01:01:11] -rw-------. 1 boinc boinc 326051017 Feb 26 01:00 HITS.pool.root.1
[2025-02-26 01:01:11] -rw-------. 1 boinc boinc    972800 Feb 26 01:01 result.tar.gz
01:01:12 (797024): run_atlas exited; CPU time 55800.385883
01:01:12 (797024): called boinc_finish(0)

</stderr_txt>
]]>

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