Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-26 01:25:05 (91080): Detected: vboxwrapper 26206
2025-02-26 01:25:05 (91080): Detected: BOINC client v8.0.2
2025-02-26 01:25:06 (91080): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2025-02-26 01:25:07 (91080): Successfully copied 'init_data.xml' to the shared directory.
2025-02-26 01:25:07 (91080): Create VM. (boinc_65a57ce8be87004a, slot#5)
2025-02-26 01:25:08 (91080): Setting Memory Size for VM. (8000MB)
2025-02-26 01:25:08 (91080): Setting CPU Count for VM. (5)
2025-02-26 01:25:08 (91080): Setting Chipset Options for VM.
2025-02-26 01:25:09 (91080): Setting Graphics Controller Options for VM.
2025-02-26 01:25:09 (91080): Setting Boot Options for VM.
2025-02-26 01:25:09 (91080): Setting Network Configuration for NAT.
2025-02-26 01:25:09 (91080): Enabling VM Network Access.
2025-02-26 01:25:10 (91080): Disabling USB Support for VM.
2025-02-26 01:25:10 (91080): Disabling COM Port Support for VM.
2025-02-26 01:25:10 (91080): Disabling LPT Port Support for VM.
2025-02-26 01:25:10 (91080): Disabling Audio Support for VM.
2025-02-26 01:25:11 (91080): Disabling Clipboard Support for VM.
2025-02-26 01:25:11 (91080): Disabling Drag and Drop Support for VM.
2025-02-26 01:25:11 (91080): Adding storage controller(s) to VM.
2025-02-26 01:25:12 (91080): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-26 01:25:15 (91080): Adding VirtualBox Guest Additions to VM.
2025-02-26 01:25:15 (91080): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-26 01:25:16 (91080): forwarding host port 54318 to guest port 80
2025-02-26 01:25:16 (91080): Enabling remote desktop for VM.
2025-02-26 01:25:16 (91080): Enabling shared directory for VM.
2025-02-26 01:25:17 (91080): Starting VM using VBoxManage interface. (boinc_65a57ce8be87004a, slot#5)
2025-02-26 01:25:25 (91080): Successfully started VM. (PID = '90708')
2025-02-26 01:25:25 (91080): Reporting VM Process ID to BOINC.
2025-02-26 01:25:25 (91080): Guest Log: BIOS: VirtualBox 7.0.14
2025-02-26 01:25:25 (91080): Guest Log: CPUID EDX: 0x178bfbff
2025-02-26 01:25:25 (91080): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-26 01:25:25 (91080): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-26 01:25:25 (91080): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-26 01:25:25 (91080): Detected: Web Application Enabled (http://localhost:54318)
2025-02-26 01:25:25 (91080): Detected: Remote Desktop Enabled (localhost:54319)
2025-02-26 01:25:25 (91080): Preference change detected
2025-02-26 01:25:25 (91080): Setting CPU throttle for VM. (100%)
2025-02-26 01:25:25 (91080): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-26 01:25:27 (91080): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-26 01:25:27 (91080): Guest Log: BIOS: Booting from Hard Disk...
2025-02-26 01:25:30 (91080): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-26 01:25:30 (91080): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-26 01:25:30 (91080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-26 01:25:41 (91080): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-26 01:25:41 (91080): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-26 01:26:21 (91080): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-26 01:26:21 (91080): Guest Log: 00:00:00.000250 main     Log opened 2025-02-26T01:26:19.268261000Z
2025-02-26 01:26:21 (91080): Guest Log: 00:00:00.000418 main     OS Product: Linux
2025-02-26 01:26:21 (91080): Guest Log: 00:00:00.000467 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-26 01:26:21 (91080): Guest Log: 00:00:00.000497 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-26 01:26:21 (91080): Guest Log: 00:00:00.000524 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-26 01:26:21 (91080): Guest Log: 00:00:00.000524 main     Process ID: 1451
2025-02-26 01:26:21 (91080): Guest Log: 00:00:00.000525 main     Package type: LINUX_64BITS_GENERIC
2025-02-26 01:26:21 (91080): Guest Log: 00:00:00.002048 main     5.2.32 r132073 started. Verbose level = 0
2025-02-26 01:26:21 (91080): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-26 01:26:21 (91080): Guest Log: [INFO] Mounting shared directory
2025-02-26 01:26:21 (91080): Guest Log: [INFO] Checking for init_data.xml
2025-02-26 01:26:30 (91080): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-26 01:26:30 (91080): Guest Log: [INFO] Detected branch: prod
2025-02-26 01:26:30 (91080): Guest Log: 00:00:10.019999 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 084 955 000ns (GuestNow=1 740 561 990 356 463 000 ns GuestLast=1 740 533 179 271 508 000 ns fSetTimeLastLoop=true )
2025-02-26 01:26:31 (91080): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-26 01:26:31 (91080): Guest Log: Copying input files
2025-02-26 01:26:32 (91080): Guest Log: Copied input files into RunAtlas.
2025-02-26 01:26:32 (91080): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-26 01:26:32 (91080): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-26 01:26:32 (91080): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-26 01:26:32 (91080): Guest Log: Further information can be found at the LHC@home message board.
2025-02-26 01:26:41 (91080): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-26 01:26:41 (91080): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-26 01:26:41 (91080): Guest Log: 2.6.3.0 1732 0 32208 143069 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-26 01:26:44 (91080): Guest Log: copied the webapp to /var/www
2025-02-26 01:26:44 (91080): Guest Log: ATHENA_PROC_NUMBER=5
2025-02-26 01:26:44 (91080): Guest Log: ATHENA_CORE_NUMBER=5
2025-02-26 01:26:44 (91080): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-26 01:26:44 (91080): Guest Log:  *** Starting ATLAS job. (PandaID=6531136562 taskID=43401163) ***
2025-02-26 01:55:51 (91080): VM state change detected. (old = 'running', new = 'paused')
2025-02-26 03:22:40 (91080): Guest Log: 00:29:30.787344 timesync vgsvcTimeSyncWorker: Radical host time change: 5 219 675 000 000ns (HostNow=1 740 568 960 798 000 000 ns HostLast=1 740 563 741 123 000 000 ns)
2025-02-26 03:22:40 (91080): VM state change detected. (old = 'paused', new = 'running')
2025-02-26 03:22:51 (91080): Guest Log: 00:29:40.787850 timesync vgsvcTimeSyncWorker: Radical guest time change: 5 219 675 179 000ns (GuestNow=1 740 568 970 798 598 000 ns GuestLast=1 740 563 751 123 419 000 ns fSetTimeLastLoop=true )
2025-02-26 03:52:53 (91080): VM state change detected. (old = 'running', new = 'paused')
2025-02-26 04:18:00 (91080): VM state change detected. (old = 'paused', new = 'running')
2025-02-26 04:48:44 (91080): VM state change detected. (old = 'running', new = 'paused')
2025-02-26 05:14:07 (91080): VM state change detected. (old = 'paused', new = 'running')
2025-02-26 05:24:33 (91080): Status Report: Elapsed Time: '6000.000000'
2025-02-26 05:24:33 (91080): Status Report: CPU Time: '24835.328125'
2025-02-26 05:36:55 (91080): Guest Log:  *** Job finished ***
2025-02-26 05:36:55 (91080): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-26 05:36:55 (91080): Guest Log: 2025-02-26 13:36:36,681 | INFO     | [data] queue_monitor thread has finished
2025-02-26 05:36:55 (91080): Guest Log: 2025-02-26 13:36:43,008 | INFO     | job.realtimelogging is not enabled
2025-02-26 05:36:55 (91080): Guest Log: 2025-02-26 13:36:44,011 | INFO     | [payload] run_realtimelog thread has finished
2025-02-26 05:36:55 (91080): Guest Log: 2025-02-26 13:36:46,039 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140120205240128)>', '<ExcThread(monitor, started 140119617042176)>']
2025-02-26 05:36:55 (91080): Guest Log: 2025-02-26 13:36:46,704 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-26 05:36:55 (91080): Guest Log: 2025-02-26 13:36:46,705 | INFO     | [monitor] control thread has ended
2025-02-26 05:36:55 (91080): Guest Log: 2025-02-26 13:36:51,045 | INFO     | all workflow threads have been joined
2025-02-26 05:36:55 (91080): Guest Log: 2025-02-26 13:36:51,045 | INFO     | end of generic workflow (traces error code: 0)
2025-02-26 05:36:55 (91080): Guest Log: 2025-02-26 13:36:51,045 | INFO     | traces error code: 0
2025-02-26 05:36:55 (91080): Guest Log: 2025-02-26 13:36:51,045 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-26 05:36:55 (91080): Guest Log: 2025-02-26 13:36:51,129 [wrapper] ==== pilot stdout END ====
2025-02-26 05:36:55 (91080): Guest Log: 2025-02-26 13:36:51,134 [wrapper] ==== wrapper stdout RESUME ====
2025-02-26 05:36:55 (91080): Guest Log: 2025-02-26 13:36:51,139 [wrapper] pilotpid: 6066
2025-02-26 05:36:55 (91080): Guest Log: 2025-02-26 13:36:51,145 [wrapper] Pilot exit status: 0
2025-02-26 05:36:55 (91080): Guest Log: 2025-02-26 13:36:51,477 [wrapper] pandaids: 6531136562
2025-02-26 05:36:55 (91080): Guest Log: 2025-02-26 13:36:51,505 [wrapper] cleanup supervisor_pilot 28578 6067
2025-02-26 05:36:55 (91080): Guest Log: 2025-02-26 13:36:51,510 [wrapper] Test setup, not cleaning
2025-02-26 05:36:55 (91080): Guest Log: 2025-02-26 13:36:51,519 [wrapper] apfmon messages muted
2025-02-26 05:36:55 (91080): Guest Log: 2025-02-26 13:36:51,524 [wrapper] ==== wrapper stdout END ====
2025-02-26 05:36:55 (91080): Guest Log: 2025-02-26 13:36:51,529 [wrapper] ==== wrapper stderr END ====
2025-02-26 05:36:55 (91080): Guest Log:  *** Error codes and diagnostics ***
2025-02-26 05:36:55 (91080): Guest Log:     "exeErrorCode": 0,
2025-02-26 05:36:55 (91080): Guest Log:     "exeErrorDiag": "",
2025-02-26 05:36:55 (91080): Guest Log:     "pilotErrorCode": 0,
2025-02-26 05:36:55 (91080): Guest Log:     "pilotErrorDiag": "",
2025-02-26 05:36:55 (91080): Guest Log:  *** Listing of results directory ***
2025-02-26 05:36:55 (91080): Guest Log: total 184028
2025-02-26 05:36:55 (91080): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 25 23:30 pilot3.tar.gz
2025-02-26 05:36:55 (91080): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 25 23:33 runpilot2-wrapper.sh
2025-02-26 05:36:55 (91080): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 25 23:33 queuedata.json
2025-02-26 05:36:55 (91080): Guest Log: -rwxr-xr-x. 1 atlas atlas      9395 Feb 26 09:26 init_data.xml
2025-02-26 05:36:55 (91080): Guest Log: -rwxr-xr-x. 1 atlas atlas    503551 Feb 26 09:26 input.tar.gz
2025-02-26 05:36:55 (91080): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 26 09:26 start_atlas.sh
2025-02-26 05:36:55 (91080): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 26 09:26 EVNT.43401161._000075.pool.root.1 -> /data/./ATLAS.root_0
2025-02-26 05:36:55 (91080): Guest Log: -rw-r--r--. 1 atlas atlas      2541 Feb 26 09:26 pandaJob.out
2025-02-26 05:36:55 (91080): Guest Log: -rw-------. 1 atlas atlas       424 Feb 26 09:26 setup.sh.local
2025-02-26 05:36:55 (91080): Guest Log: -rw-------. 1 atlas atlas    990040 Feb 26 09:28 agis_schedconf.cvmfs.json
2025-02-26 05:36:55 (91080): Guest Log: drwx------. 4 atlas atlas      4096 Feb 26 09:28 pilot3
2025-02-26 05:36:55 (91080): Guest Log: -rw-------. 1 atlas atlas 183103049 Feb 26 13:35 HITS.43401163._001910.pool.root.1
2025-02-26 05:36:55 (91080): Guest Log: -rw-------. 1 atlas atlas      1050 Feb 26 13:36 memory_monitor_summary.json
2025-02-26 05:36:55 (91080): Guest Log: -rw-------. 1 atlas atlas   1569202 Feb 26 13:36 agis_ddmendpoints.agis.ALL.json
2025-02-26 05:36:55 (91080): Guest Log: -rw-------. 1 atlas atlas    269005 Feb 26 13:36 log.43401163._001910.job.log.tgz.1
2025-02-26 05:36:55 (91080): Guest Log: -rw-------. 1 atlas atlas        97 Feb 26 13:36 pilot_heartbeat.json
2025-02-26 05:36:55 (91080): Guest Log: -rw-------. 1 atlas atlas      7753 Feb 26 13:36 heartbeat.json
2025-02-26 05:36:55 (91080): Guest Log: -rw-------. 1 atlas atlas      4421 Feb 26 13:36 pilotlog.txt
2025-02-26 05:36:55 (91080): Guest Log: -rw-------. 1 atlas atlas    538803 Feb 26 13:36 log.43401163._001910.job.log.1
2025-02-26 05:36:55 (91080): Guest Log: -rw-------. 1 atlas atlas       357 Feb 26 13:36 output.list
2025-02-26 05:36:55 (91080): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 26 13:36 runtime_log
2025-02-26 05:36:55 (91080): Guest Log: -rw-------. 1 atlas atlas    829440 Feb 26 13:36 result.tar.gz
2025-02-26 05:36:55 (91080): Guest Log: -rw-r--r--. 1 atlas atlas     10945 Feb 26 13:36 runtime_log.err
2025-02-26 05:36:55 (91080): Guest Log: -rw-------. 1 atlas atlas       657 Feb 26 13:36 6q6KDmbbJ76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmufgKDmyL8uCn.diag
2025-02-26 05:36:55 (91080): Guest Log: Looking for outputfile HITS.43401163._001910.pool.root.1
2025-02-26 05:36:55 (91080): Guest Log: HITS file was successfully produced
2025-02-26 05:36:55 (91080): Guest Log: -rw-------. 1 atlas atlas 183103049 Feb 26 13:35 /home/atlas/RunAtlas/HITS.43401163._001910.pool.root.1
2025-02-26 05:36:56 (91080): Guest Log: Successfully finished the ATLAS job!
2025-02-26 05:36:56 (91080): Guest Log: Copying the results back to the shared directory!
2025-02-26 05:36:56 (91080): Guest Log:  *** Contents of shared directory: ***
2025-02-26 05:36:56 (91080): Guest Log: total 427296
2025-02-26 05:36:56 (91080): Guest Log: -rwxrwxrwx. 1 root root 253078483 Feb 26 09:25 ATLAS.root_0
2025-02-26 05:36:56 (91080): Guest Log: -rwxrwxrwx. 1 root root 183103049 Feb 26 13:36 HITS.pool.root.1
2025-02-26 05:36:56 (91080): Guest Log: -rwxrwxrwx. 1 root root      9395 Feb 26 09:25 init_data.xml
2025-02-26 05:36:56 (91080): Guest Log: -rwxrwxrwx. 1 root root    503551 Feb 26 03:10 input.tar.gz
2025-02-26 05:36:56 (91080): Guest Log: -rwxrwxrwx. 1 root root    829440 Feb 26 13:36 result.tar.gz
2025-02-26 05:36:56 (91080): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 26 03:10 start_atlas.sh
2025-02-26 05:36:56 (91080): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-26 05:36:56 (91080): VM Completion File Detected.
2025-02-26 05:36:56 (91080): Powering off VM.
2025-02-26 05:36:58 (91080): Successfully stopped VM.
2025-02-26 05:36:58 (91080): Deregistering VM. (boinc_65a57ce8be87004a, slot#5)
2025-02-26 05:36:58 (91080): Removing network bandwidth throttle group from VM.
2025-02-26 05:36:58 (91080): Removing VM from VirtualBox.
05:37:03 (91080): called boinc_finish(0)

</stderr_txt>
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