Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:58:25 (3745353): wrapper (7.7.26015): starting
06:58:25 (3745353): wrapper: running run_atlas (--nthreads 4)
[2025-02-27 06:58:25] Arguments: --nthreads 4
[2025-02-27 06:58:25] Threads: 4
[2025-02-27 06:58:25] Checking for CVMFS
[2025-02-27 06:58:25] No cvmfs_config command found, will try listing directly
[2025-02-27 06:58:25] CVMFS is ok
[2025-02-27 06:58:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-27 06:58:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-27 06:58:25] Further information can be found at the LHC@home message board.
[2025-02-27 06:58:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-27 06:58:25] Checking for apptainer binary...
[2025-02-27 06:58:25] which: no apptainer in ((null))
[2025-02-27 06:58:25] apptainer is not installed, using version from CVMFS
[2025-02-27 06:58:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-27 06:58:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-02-27 06:58:25] apptainer works
[2025-02-27 06:58:25] Set ATHENA_PROC_NUMBER=4
[2025-02-27 06:58:25] Set ATHENA_CORE_NUMBER=4
[2025-02-27 06:58:25] Starting ATLAS job with PandaID=6531137106
[2025-02-27 06:58:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-27 09:30:44]  *** The last 200 lines of the pilot log: ***
[2025-02-27 09:30:44] 2025-02-27 08:30:24,632 | INFO     | right removable region: 143
[2025-02-27 09:30:44] 2025-02-27 08:30:24,632 | INFO     | model: linear, x: [1740636255.0, 1740636316.0, 1740636377.0, 1740636438.0, 1740636499.0, 1740636560.0, 1740636621.0, 1740636682.0, 1740636743.0, 1740636804.0, 1740
[2025-02-27 09:30:44] 2025-02-27 08:30:24,632 | INFO     | sum of square deviations: 925859220.0
[2025-02-27 09:30:44] 2025-02-27 08:30:24,633 | INFO     | sum of deviations: 33144308458.999996
[2025-02-27 09:30:44] 2025-02-27 08:30:24,633 | INFO     | mean x: 1740640616.5
[2025-02-27 09:30:44] 2025-02-27 08:30:24,633 | INFO     | mean y: 2282779.027777778
[2025-02-27 09:30:44] 2025-02-27 08:30:24,633 | INFO     | -- intersect: -62309922212.07218
[2025-02-27 09:30:44] 2025-02-27 08:30:24,633 | INFO     | intersect: -62309922212.07218
[2025-02-27 09:30:44] 2025-02-27 08:30:24,634 | INFO     | chi2: 1.4623103369464576
[2025-02-27 09:30:44] 2025-02-27 08:30:24,634 | INFO     | current chi2=1.4623103369464576 (change=62.98185629554121 %)
[2025-02-27 09:30:44] 2025-02-27 08:30:24,634 | INFO     | model: linear, x: [1740636560.0, 1740636621.0, 1740636682.0, 1740636743.0, 1740636804.0, 1740636865.0, 1740636926.0, 1740636987.0, 1740637048.0, 1740637109.0, 1740
[2025-02-27 09:30:44] 2025-02-27 08:30:24,634 | INFO     | sum of square deviations: 832722590.0
[2025-02-27 09:30:44] 2025-02-27 08:30:24,635 | INFO     | sum of deviations: 6757269448.999999
[2025-02-27 09:30:44] 2025-02-27 08:30:24,635 | INFO     | mean x: 1740640769.0
[2025-02-27 09:30:44] 2025-02-27 08:30:24,635 | INFO     | mean y: 2325996.273381295
[2025-02-27 09:30:44] 2025-02-27 08:30:24,635 | INFO     | -- intersect: -14122400330.710934
[2025-02-27 09:30:44] 2025-02-27 08:30:24,635 | INFO     | intersect: -14122400330.710934
[2025-02-27 09:30:44] 2025-02-27 08:30:24,635 | INFO     | chi2: 0.07198745173829783
[2025-02-27 09:30:44] 2025-02-27 08:30:24,636 | INFO     | current chi2=0.07198745173829783 (change=95.07714266120696 %)
[2025-02-27 09:30:44] 2025-02-27 08:30:24,636 | INFO     | model: linear, x: [1740636865.0, 1740636926.0, 1740636987.0, 1740637048.0, 1740637109.0, 1740637170.0, 1740637231.0, 1740637292.0, 1740637353.0, 1740637414.0, 1740
[2025-02-27 09:30:44] 2025-02-27 08:30:24,638 | INFO     | sum of square deviations: 746051197.5
[2025-02-27 09:30:44] 2025-02-27 08:30:24,639 | INFO     | sum of deviations: 2672019173.0
[2025-02-27 09:30:44] 2025-02-27 08:30:24,639 | INFO     | mean x: 1740640921.5
[2025-02-27 09:30:44] 2025-02-27 08:30:24,639 | INFO     | mean y: 2333031.7462686566
[2025-02-27 09:30:44] 2025-02-27 08:30:24,639 | INFO     | -- intersect: -6231858309.467132
[2025-02-27 09:30:44] 2025-02-27 08:30:24,639 | INFO     | intersect: -6231858309.467132
[2025-02-27 09:30:44] 2025-02-27 08:30:24,639 | INFO     | chi2: 0.0014234927470773504
[2025-02-27 09:30:44] 2025-02-27 08:30:24,639 | INFO     | current chi2=0.0014234927470773504 (change=98.02258211298782 %)
[2025-02-27 09:30:44] 2025-02-27 08:30:24,640 | INFO     | model: linear, x: [1740637170.0, 1740637231.0, 1740637292.0, 1740637353.0, 1740637414.0, 1740637475.0, 1740637536.0, 1740637597.0, 1740637658.0, 1740637719.0, 1740
[2025-02-27 09:30:44] 2025-02-27 08:30:24,640 | INFO     | sum of square deviations: 665612480.0
[2025-02-27 09:30:44] 2025-02-27 08:30:24,641 | INFO     | sum of deviations: 2570061333.0
[2025-02-27 09:30:44] 2025-02-27 08:30:24,641 | INFO     | mean x: 1740641074.0
[2025-02-27 09:30:44] 2025-02-27 08:30:24,641 | INFO     | mean y: 2333243.581395349
[2025-02-27 09:30:44] 2025-02-27 08:30:24,641 | INFO     | -- intersect: -6718625953.155708
[2025-02-27 09:30:44] 2025-02-27 08:30:24,641 | INFO     | intersect: -6718625953.155708
[2025-02-27 09:30:44] 2025-02-27 08:30:24,641 | INFO     | chi2: 0.0007005486054284394
[2025-02-27 09:30:44] 2025-02-27 08:30:24,641 | INFO     | current chi2=0.0007005486054284394 (change=50.786640334713795 %)
[2025-02-27 09:30:44] 2025-02-27 08:30:24,641 | INFO     | model: linear, x: [1740637475.0, 1740637536.0, 1740637597.0, 1740637658.0, 1740637719.0, 1740637780.0, 1740637841.0, 1740637902.0, 1740637963.0, 1740638024.0, 1740
[2025-02-27 09:30:44] 2025-02-27 08:30:24,642 | INFO     | sum of square deviations: 591173875.0
[2025-02-27 09:30:44] 2025-02-27 08:30:24,642 | INFO     | sum of deviations: 2092697537.0
[2025-02-27 09:30:44] 2025-02-27 08:30:24,642 | INFO     | mean x: 1740641226.5
[2025-02-27 09:30:44] 2025-02-27 08:30:24,642 | INFO     | mean y: 2334221.0483870967
[2025-02-27 09:30:44] 2025-02-27 08:30:24,642 | INFO     | -- intersect: -6159365004.069111
[2025-02-27 09:30:44] 2025-02-27 08:30:24,643 | INFO     | intersect: -6159365004.069111
[2025-02-27 09:30:44] 2025-02-27 08:30:24,643 | INFO     | chi2: 0.0005992110874515247
[2025-02-27 09:30:44] 2025-02-27 08:30:24,643 | INFO     | current chi2=0.0005992110874515247 (change=14.465451389334932 %)
[2025-02-27 09:30:44] 2025-02-27 08:30:24,643 | INFO     | left removable region: 50
[2025-02-27 09:30:44] 2025-02-27 08:30:24,643 | INFO     | model: linear, x: [1740639000.0, 1740639061.0, 1740639122.0, 1740639183.0, 1740639244.0, 1740639305.0, 1740639366.0, 1740639427.0, 1740639488.0, 1740639549.0, 1740
[2025-02-27 09:30:44] 2025-02-27 08:30:24,643 | INFO     | sum of square deviations: 249388862.0
[2025-02-27 09:30:44] 2025-02-27 08:30:24,644 | INFO     | sum of deviations: 488636779.00000024
[2025-02-27 09:30:44] 2025-02-27 08:30:24,644 | INFO     | mean x: 1740641806.0
[2025-02-27 09:30:44] 2025-02-27 08:30:24,644 | INFO     | mean y: 2337850.9139784947
[2025-02-27 09:30:44] 2025-02-27 08:30:24,644 | INFO     | -- intersect: -3408165724.32822
[2025-02-27 09:30:44] 2025-02-27 08:30:24,644 | INFO     | intersect: -3408165724.32822
[2025-02-27 09:30:44] 2025-02-27 08:30:24,644 | INFO     | chi2: 9.459886060937214e-05
[2025-02-27 09:30:44] 2025-02-27 08:30:24,644 | INFO     | -- intersect: -3408165724.32822
[2025-02-27 09:30:44] 2025-02-27 08:30:24,644 | INFO     | current memory leak: 1.96 B/s (using 93 data points, chi2=0.00)
[2025-02-27 09:30:44] 2025-02-27 08:30:24,645 | INFO     | ..............................
[2025-02-27 09:30:44] 2025-02-27 08:30:24,645 | INFO     | . Timing measurements:
[2025-02-27 09:30:44] 2025-02-27 08:30:24,645 | INFO     | . get job = 0 s
[2025-02-27 09:30:44] 2025-02-27 08:30:24,645 | INFO     | . initial setup = 1 s
[2025-02-27 09:30:44] 2025-02-27 08:30:24,645 | INFO     | . payload setup = 8 s
[2025-02-27 09:30:44] 2025-02-27 08:30:24,645 | INFO     | . stage-in = 0 s
[2025-02-27 09:30:44] 2025-02-27 08:30:24,645 | INFO     | . payload execution = 9069 s
[2025-02-27 09:30:44] 2025-02-27 08:30:24,645 | INFO     | . stage-out = 0 s
[2025-02-27 09:30:44] 2025-02-27 08:30:24,646 | INFO     | . log creation = 0 s
[2025-02-27 09:30:44] 2025-02-27 08:30:24,646 | INFO     | ..............................
[2025-02-27 09:30:44] 2025-02-27 08:30:24,744 | INFO     | 
[2025-02-27 09:30:44] 2025-02-27 08:30:24,744 | INFO     | job summary report
[2025-02-27 09:30:44] 2025-02-27 08:30:24,744 | INFO     | --------------------------------------------------
[2025-02-27 09:30:44] 2025-02-27 08:30:24,745 | INFO     | PanDA job id: 6531137106
[2025-02-27 09:30:44] 2025-02-27 08:30:24,745 | INFO     | task id: 43401163
[2025-02-27 09:30:44] 2025-02-27 08:30:24,745 | INFO     | errors: (none)
[2025-02-27 09:30:44] 2025-02-27 08:30:24,745 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-27 09:30:44] 2025-02-27 08:30:24,745 | INFO     | pilot state: finished 
[2025-02-27 09:30:44] 2025-02-27 08:30:24,745 | INFO     | transexitcode: 0
[2025-02-27 09:30:44] 2025-02-27 08:30:24,745 | INFO     | exeerrorcode: 0
[2025-02-27 09:30:44] 2025-02-27 08:30:24,745 | INFO     | exeerrordiag: 
[2025-02-27 09:30:44] 2025-02-27 08:30:24,745 | INFO     | exitcode: 0
[2025-02-27 09:30:44] 2025-02-27 08:30:24,745 | INFO     | exitmsg: OK
[2025-02-27 09:30:44] 2025-02-27 08:30:24,745 | INFO     | cpuconsumptiontime: 33639 s
[2025-02-27 09:30:44] 2025-02-27 08:30:24,746 | INFO     | nevents: 400
[2025-02-27 09:30:44] 2025-02-27 08:30:24,746 | INFO     | neventsw: 0
[2025-02-27 09:30:44] 2025-02-27 08:30:24,746 | INFO     | pid: 3757203
[2025-02-27 09:30:44] 2025-02-27 08:30:24,746 | INFO     | pgrp: 3757203
[2025-02-27 09:30:44] 2025-02-27 08:30:24,746 | INFO     | corecount: 4
[2025-02-27 09:30:44] 2025-02-27 08:30:24,746 | INFO     | event service: False
[2025-02-27 09:30:44] 2025-02-27 08:30:24,746 | INFO     | sizes: {0: 2363826, 6: 2364032, 11: 2364060, 9080: 2392071, 9081: 2392070, 9082: 2401089, 9083: 2401273, 9089: 2401443}
[2025-02-27 09:30:44] 2025-02-27 08:30:24,746 | INFO     | --------------------------------------------------
[2025-02-27 09:30:44] 2025-02-27 08:30:24,746 | INFO     | 
[2025-02-27 09:30:44] 2025-02-27 08:30:24,746 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-02-27 09:30:44] 2025-02-27 08:30:24,774 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-27 09:30:44] 2025-02-27 08:30:24,774 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-27 09:30:44] 2025-02-27 08:30:24,774 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-27 09:30:44] 2025-02-27 08:30:24,774 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-27 09:30:44] 2025-02-27 08:30:24,774 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-27 09:30:44] 2025-02-27 08:30:24,774 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-27 09:30:44] 2025-02-27 08:30:24,774 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-27 09:30:44] 2025-02-27 08:30:24,775 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-27 09:30:44] 2025-02-27 08:30:24,775 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-27 09:30:44] 2025-02-27 08:30:24,775 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-27 09:30:44] 2025-02-27 08:30:24,775 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-27 09:30:44] 2025-02-27 08:30:24,775 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-27 09:30:44] 2025-02-27 08:30:24,775 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-27 09:30:44] 2025-02-27 08:30:24,775 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-27 09:30:44] 2025-02-27 08:30:24,775 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-27 09:30:44] 2025-02-27 08:30:24,775 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-27 09:30:44] 2025-02-27 08:30:24,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-27 09:30:44] 2025-02-27 08:30:24,776 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-27 09:30:44] 2025-02-27 08:30:24,776 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-27 09:30:44] 2025-02-27 08:30:24,776 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-27 09:30:44] 2025-02-27 08:30:24,776 | INFO     | job 6531137106 has completed (purged errors)
[2025-02-27 09:30:44] 2025-02-27 08:30:24,776 | INFO     | overall cleanup function is called
[2025-02-27 09:30:44] 2025-02-27 08:30:25,784 | INFO     | --- collectZombieJob: --- 10, [3757203]
[2025-02-27 09:30:44] 2025-02-27 08:30:25,785 | INFO     | zombie collector waiting for pid 3757203
[2025-02-27 09:30:44] 2025-02-27 08:30:25,785 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-27 09:30:44] 2025-02-27 08:30:25,785 | INFO     | collected zombie processes
[2025-02-27 09:30:44] 2025-02-27 08:30:25,785 | INFO     | will attempt to kill all subprocesses of pid=3757203
[2025-02-27 09:30:44] 2025-02-27 08:30:26,062 | INFO     | process IDs to be killed: [3757203] (in reverse order)
[2025-02-27 09:30:44] 2025-02-27 08:30:26,309 | WARNING  | found no corresponding commands to process id(s)
[2025-02-27 09:30:44] 2025-02-27 08:30:26,311 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-27 09:30:44] 2025-02-27 08:30:26,331 | INFO     | did not find any defunct processes belonging to 3757203
[2025-02-27 09:30:44] 2025-02-27 08:30:26,348 | INFO     | did not find any defunct processes belonging to 3757203
[2025-02-27 09:30:44] 2025-02-27 08:30:26,348 | INFO     | ready for new job
[2025-02-27 09:30:44] 2025-02-27 08:30:26,348 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-27 09:30:44] 2025-02-27 08:30:26,350 | INFO     | **************************************
[2025-02-27 09:30:44] 2025-02-27 08:30:26,350 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-27 09:30:44] 2025-02-27 08:30:26,350 | INFO     | **************************************
[2025-02-27 09:30:44] 2025-02-27 08:30:26,350 | INFO     | 
[2025-02-27 09:30:44] 2025-02-27 08:30:26,358 | INFO     | architecture information:
[2025-02-27 09:30:44] 2025-02-27 08:30:26,358 | INFO     | executing command: cat /etc/os-release
[2025-02-27 09:30:44] 2025-02-27 08:30:26,379 | INFO     | cat /etc/os-release:
[2025-02-27 09:30:44] NAME="CentOS Linux"
[2025-02-27 09:30:44] VERSION="7 (Core)"
[2025-02-27 09:30:44] ID="centos"
[2025-02-27 09:30:44] ID_LIKE="rhel fedora"
[2025-02-27 09:30:44] VERSION_ID="7"
[2025-02-27 09:30:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-27 09:30:44] ANSI_COLOR="0;31"
[2025-02-27 09:30:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-27 09:30:44] HOME_URL="https://www.centos.org/"
[2025-02-27 09:30:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-27 09:30:44] 
[2025-02-27 09:30:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-27 09:30:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-27 09:30:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-27 09:30:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-27 09:30:44] 
[2025-02-27 09:30:44] 2025-02-27 08:30:26,379 | INFO     | **************************************
[2025-02-27 09:30:44] 2025-02-27 08:30:26,882 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-02-27 09:30:44] 2025-02-27 08:30:26,907 | INFO     | sufficient remaining disk space (3359332368384 B)
[2025-02-27 09:30:44] 2025-02-27 08:30:26,907 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-27 09:30:44] 2025-02-27 08:30:26,907 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-27 09:30:44] 2025-02-27 08:30:26,908 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-27 09:30:44] 2025-02-27 08:30:26,908 | INFO     | aborting loop
[2025-02-27 09:30:44] 2025-02-27 08:30:26,998 | INFO     | all job control threads have been joined
[2025-02-27 09:30:44] 2025-02-27 08:30:27,323 | INFO     | all data control threads have been joined
[2025-02-27 09:30:44] 2025-02-27 08:30:27,744 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-27 09:30:44] 2025-02-27 08:30:27,913 | INFO     | [job] retrieve thread has finished
[2025-02-27 09:30:44] 2025-02-27 08:30:27,914 | INFO     | [job] job monitor thread has finished
[2025-02-27 09:30:44] 2025-02-27 08:30:27,918 | INFO     | all payload control threads have been joined
[2025-02-27 09:30:44] 2025-02-27 08:30:27,946 | INFO     | PID=3749704 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-02-27 09:30:44] 2025-02-27 08:30:27,946 | INFO     | .. there are 24 such processes running
[2025-02-27 09:30:44] 2025-02-27 08:30:27,947 | INFO     | found 0 job(s) in 20 queues
[2025-02-27 09:30:44] 2025-02-27 08:30:27,947 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-27 09:30:44] 2025-02-27 08:30:27,947 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-27 09:30:44] 2025-02-27 08:30:28,004 | INFO     | [job] control thread has finished
[2025-02-27 09:30:44] 2025-02-27 08:30:28,287 | INFO     | [payload] validate_post thread has finished
[2025-02-27 09:30:44] 2025-02-27 08:30:28,325 | INFO     | [data] control thread has finished
[2025-02-27 09:30:44] 2025-02-27 08:30:28,424 | INFO     | [job] validate thread has finished
[2025-02-27 09:30:44] 2025-02-27 08:30:28,625 | INFO     | [job] create_data_payload thread has finished
[2025-02-27 09:30:44] 2025-02-27 08:30:28,708 | INFO     | [payload] failed_post thread has finished
[2025-02-27 09:30:44] 2025-02-27 08:30:28,894 | INFO     | [payload] validate_pre thread has finished
[2025-02-27 09:30:44] 2025-02-27 08:30:28,923 | INFO     | [payload] control thread has finished
[2025-02-27 09:30:44] 2025-02-27 08:30:28,962 | INFO     | [payload] execute_payloads thread has finished
[2025-02-27 09:30:44] 2025-02-27 08:30:29,008 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-27 09:30:44] 2025-02-27 08:30:29,085 | INFO     | [data] copytool_in thread has finished
[2025-02-27 09:30:44] 2025-02-27 08:30:29,749 | INFO     | [data] copytool_out thread has finished
[2025-02-27 09:30:44] 2025-02-27 08:30:29,752 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-27 09:30:44] 2025-02-27 08:30:30,758 | INFO     | [job] queue monitor thread has finished
[2025-02-27 09:30:44] 2025-02-27 08:30:33,014 | INFO     | [data] queue_monitor thread has finished
[2025-02-27 09:30:44] 2025-02-27 08:30:37,420 | INFO     | job.realtimelogging is not enabled
[2025-02-27 09:30:44] 2025-02-27 08:30:38,425 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-27 09:30:44] 2025-02-27 08:30:38,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23271623710528)>', '<ExcThread(monitor, started 23271388968704)>']
[2025-02-27 09:30:44] 2025-02-27 08:30:38,998 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-27 09:30:44] 2025-02-27 08:30:38,998 | INFO     | [monitor] control thread has ended
[2025-02-27 09:30:44] 2025-02-27 08:30:43,781 | INFO     | all workflow threads have been joined
[2025-02-27 09:30:44] 2025-02-27 08:30:43,782 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-27 09:30:44] 2025-02-27 08:30:43,782 | INFO     | traces error code: 0
[2025-02-27 09:30:44] 2025-02-27 08:30:43,782 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-27 09:30:44] 2025-02-27 08:30:43,910 [wrapper] ==== pilot stdout END ====
[2025-02-27 09:30:44] 2025-02-27 08:30:43,914 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-27 09:30:44] 2025-02-27 08:30:43,918 [wrapper] pilotpid: 3749704
[2025-02-27 09:30:44] 2025-02-27 08:30:43,922 [wrapper] Pilot exit status: 0
[2025-02-27 09:30:44] 2025-02-27 08:30:43,939 [wrapper] pandaids: 6531137106
[2025-02-27 09:30:44] 2025-02-27 08:30:44,068 [wrapper] cleanup supervisor_pilot  220700 3749705
[2025-02-27 09:30:44] 2025-02-27 08:30:44,073 [wrapper] Test setup, not cleaning
[2025-02-27 09:30:44] 2025-02-27 08:30:44,081 [wrapper] apfmon messages muted
[2025-02-27 09:30:44] 2025-02-27 08:30:44,084 [wrapper] ==== wrapper stdout END ====
[2025-02-27 09:30:44] 2025-02-27 08:30:44,088 [wrapper] ==== wrapper stderr END ====
[2025-02-27 09:30:44]  *** Error codes and diagnostics ***
[2025-02-27 09:30:44]     "exeErrorCode": 0,
[2025-02-27 09:30:44]     "exeErrorDiag": "",
[2025-02-27 09:30:44]     "pilotErrorCode": 0,
[2025-02-27 09:30:44]     "pilotErrorDiag": "",
[2025-02-27 09:30:44]  *** Listing of results directory ***
[2025-02-27 09:30:44] total 439456
[2025-02-27 09:30:44] -rw-r--r-- 1 boinc boinc      5118 Feb 26 00:33 queuedata.json
[2025-02-27 09:30:44] -rwx------ 1 boinc boinc     35865 Feb 26 00:33 runpilot2-wrapper.sh
[2025-02-27 09:30:44] -rw-r--r-- 1 boinc boinc    491065 Feb 26 00:33 pilot3.tar.gz
[2025-02-27 09:30:44] -rw-r--r-- 1 boinc boinc       100 Feb 27 06:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-27 09:30:44] -rwxr-xr-x 1 boinc boinc      7986 Feb 27 06:58 run_atlas
[2025-02-27 09:30:44] -rw-r--r-- 1 boinc boinc       105 Feb 27 06:58 job.xml
[2025-02-27 09:30:44] -rw-r--r-- 2 boinc boinc 254644384 Feb 27 06:58 EVNT.43401161._000085.pool.root.1
[2025-02-27 09:30:44] -rw-r--r-- 1 boinc boinc      6677 Feb 27 06:58 init_data.xml
[2025-02-27 09:30:44] drwxrwx--x 2 boinc boinc      4096 Feb 27 06:58 shared
[2025-02-27 09:30:44] -rw-r--r-- 2 boinc boinc    503551 Feb 27 06:58 input.tar.gz
[2025-02-27 09:30:44] -rw-r--r-- 2 boinc boinc     17569 Feb 27 06:58 start_atlas.sh
[2025-02-27 09:30:44] -rw-r--r-- 1 boinc boinc         0 Feb 27 06:58 boinc_lockfile
[2025-02-27 09:30:44] -rw-r--r-- 1 boinc boinc      2541 Feb 27 06:58 pandaJob.out
[2025-02-27 09:30:44] -rw------- 1 boinc boinc       424 Feb 27 06:58 setup.sh.local
[2025-02-27 09:30:44] -rw------- 1 boinc boinc    989845 Feb 27 06:58 agis_schedconf.cvmfs.json
[2025-02-27 09:30:44] -rw------- 1 boinc boinc   1569202 Feb 27 06:58 agis_ddmendpoints.agis.ALL.json
[2025-02-27 09:30:44] drwx------ 4 boinc boinc      4096 Feb 27 06:58 pilot3
[2025-02-27 09:30:44] -rw-r--r-- 1 boinc boinc       529 Feb 27 09:29 boinc_task_state.xml
[2025-02-27 09:30:44] -rw------- 1 boinc boinc 189123223 Feb 27 09:29 HITS.43401163._002153.pool.root.1
[2025-02-27 09:30:44] -rw------- 1 boinc boinc        95 Feb 27 09:29 pilot_heartbeat.json
[2025-02-27 09:30:44] -rw------- 1 boinc boinc      1022 Feb 27 09:30 memory_monitor_summary.json
[2025-02-27 09:30:44] -rw-r--r-- 1 boinc boinc      8192 Feb 27 09:30 boinc_mmap_file
[2025-02-27 09:30:44] -rw-r--r-- 1 boinc boinc        27 Feb 27 09:30 wrapper_checkpoint.txt
[2025-02-27 09:30:44] -rw------- 1 boinc boinc    284175 Feb 27 09:30 log.43401163._002153.job.log.tgz.1
[2025-02-27 09:30:44] -rw------- 1 boinc boinc      7685 Feb 27 09:30 heartbeat.json
[2025-02-27 09:30:44] -rw------- 1 boinc boinc      4694 Feb 27 09:30 pilotlog.txt
[2025-02-27 09:30:44] -rw------- 1 boinc boinc    932574 Feb 27 09:30 log.43401163._002153.job.log.1
[2025-02-27 09:30:44] -rw------- 1 boinc boinc       357 Feb 27 09:30 output.list
[2025-02-27 09:30:44] -rw-r--r-- 1 boinc boinc       620 Feb 27 09:30 runtime_log
[2025-02-27 09:30:44] -rw------- 1 boinc boinc   1239040 Feb 27 09:30 result.tar.gz
[2025-02-27 09:30:44] -rw------- 1 boinc boinc       662 Feb 27 09:30 WGRNDmlbJ76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmejgKDmuKnHvn.diag
[2025-02-27 09:30:44] -rw-r--r-- 1 boinc boinc     11423 Feb 27 09:30 runtime_log.err
[2025-02-27 09:30:44] -rw-r--r-- 1 boinc boinc     21444 Feb 27 09:30 stderr.txt
[2025-02-27 09:30:44] HITS file was successfully produced:
[2025-02-27 09:30:44] -rw------- 1 boinc boinc 189123223 Feb 27 09:29 shared/HITS.pool.root.1
[2025-02-27 09:30:44]  *** Contents of shared directory: ***
[2025-02-27 09:30:44] total 435104
[2025-02-27 09:30:44] -rw-r--r-- 2 boinc boinc 254644384 Feb 27 06:58 ATLAS.root_0
[2025-02-27 09:30:44] -rw-r--r-- 2 boinc boinc    503551 Feb 27 06:58 input.tar.gz
[2025-02-27 09:30:44] -rw-r--r-- 2 boinc boinc     17569 Feb 27 06:58 start_atlas.sh
[2025-02-27 09:30:44] -rw------- 1 boinc boinc 189123223 Feb 27 09:29 HITS.pool.root.1
[2025-02-27 09:30:44] -rw------- 1 boinc boinc   1239040 Feb 27 09:30 result.tar.gz
09:30:45 (3745353): run_atlas exited; CPU time 33465.335420
09:30:45 (3745353): called boinc_finish(0)

</stderr_txt>
]]>

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