Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
03:22:20 (2507378): wrapper (7.7.26015): starting
03:22:20 (2507378): wrapper: running run_atlas (--nthreads 12)
[2025-02-26 03:22:20] Arguments: --nthreads 12
[2025-02-26 03:22:20] Threads: 12
[2025-02-26 03:22:20] Checking for CVMFS
[2025-02-26 03:22:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-26 03:22:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-26 03:22:20] Running cvmfs_config stat atlas.cern.ch
[2025-02-26 03:22:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-26 03:22:20] 2.12.6.0 34541 791 52908 143059 1 56 5143800 6291456 921 130560 0 2973173 99.799 765615 1164 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.12.5:3128 1
[2025-02-26 03:22:20] CVMFS is ok
[2025-02-26 03:22:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 03:22:20] Checking for apptainer binary...
[2025-02-26 03:22:20] apptainer is not installed, using version from CVMFS
[2025-02-26 03:22:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 03:22:20] pm108
[2025-02-26 03:22:20] apptainer works
[2025-02-26 03:22:20] Set ATHENA_PROC_NUMBER=12
[2025-02-26 03:22:20] Set ATHENA_CORE_NUMBER=12
[2025-02-26 03:22:20] Starting ATLAS job with PandaID=6531137094
[2025-02-26 03:22:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 04:06:19]  *** The last 200 lines of the pilot log: ***
[2025-02-26 04:06:19]  filetype=log
[2025-02-26 04:06:19]  guid=9f4d24e7-5b02-4a96-b615-218dc4e3ba77
[2025-02-26 04:06:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-26 04:06:19]  is_altstaged=None
[2025-02-26 04:06:19]  is_tar=False
[2025-02-26 04:06:19]  lfn=log.43401163._002141.job.log.tgz.1
[2025-02-26 04:06:19]  mtime=0
[2025-02-26 04:06:19]  protocol_id=None
[2025-02-26 04:06:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-26 04:06:19]  replicas=None
[2025-02-26 04:06:19]  scope=mc23_13p6TeV
[2025-02-26 04:06:19]  status=None
[2025-02-26 04:06:19]  status_code=0
[2025-02-26 04:06:19]  storage_token=
[2025-02-26 04:06:19]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6531137094/log.43401163._002141.job.log.tgz.1
[2025-02-26 04:06:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/e6/log.43401163._002141.job.log.tgz.1
[2025-02-26 04:06:19]  workdir=None
[2025-02-26 04:06:19] ]
[2025-02-26 04:06:19] 2025-02-26 03:05:54,308 | INFO     | transferring file log.43401163._002141.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6531137094/log.43401163._002141.job.log.tgz.1 to /var/lib/boinc
[2025-02-26 04:06:19] 2025-02-26 03:05:54,308 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6531137094/log.43401163._002141.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.434011
[2025-02-26 04:06:19] 2025-02-26 03:05:54,318 | INFO     | adding to output.list: log.43401163._002141.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/e6/log.43401163._002141.job.log.tg
[2025-02-26 04:06:19] 2025-02-26 03:05:54,318 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-26 04:06:19] 2025-02-26 03:05:54,318 | INFO     | summary of transferred files:
[2025-02-26 04:06:19] 2025-02-26 03:05:54,318 | INFO     |  -- lfn=log.43401163._002141.job.log.tgz.1, status_code=0, status=transferred
[2025-02-26 04:06:19] 2025-02-26 03:05:54,318 | INFO     | stage-out finished correctly
[2025-02-26 04:06:19] 2025-02-26 03:05:55,813 | INFO     | monitor loop #202: job 0:6531137094 is in state 'finished'
[2025-02-26 04:06:19] 2025-02-26 03:05:55,814 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 04:06:19] 2025-02-26 03:05:56,111 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-26 04:06:19] 2025-02-26 03:05:56,689 | INFO     | job 6531137094 has state=finished
[2025-02-26 04:06:19] 2025-02-26 03:05:56,690 | INFO     | preparing for final server update for job 6531137094 in state='finished'
[2025-02-26 04:06:19] 2025-02-26 03:05:56,690 | INFO     | this job has now completed (state=finished)
[2025-02-26 04:06:19] 2025-02-26 03:05:56,690 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-26 04:06:19] 2025-02-26 03:05:56,690 | INFO     | log transfer has been attempted: DONE
[2025-02-26 04:06:19] 2025-02-26 03:05:56,690 | INFO     | job 6531137094 has finished - writing final server update
[2025-02-26 04:06:19] 2025-02-26 03:05:56,690 | INFO     | total number of processed events: 400 (read)
[2025-02-26 04:06:19] 2025-02-26 03:05:56,693 | INFO     | executing command: lscpu
[2025-02-26 04:06:19] 2025-02-26 03:05:56,722 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2025-02-26 04:06:19] 2025-02-26 03:05:56,732 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-26 04:06:19] 2025-02-26 03:05:58,316 | INFO     | monitor loop #203: job 0:6531137094 is in state 'finished'
[2025-02-26 04:06:19] 2025-02-26 03:05:58,316 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 04:06:19] 2025-02-26 03:05:59,131 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-26 04:06:19] 2025-02-26 03:05:59,132 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6531137094/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 04:06:19] 2025-02-26 03:05:59,132 | INFO     | extracted standard info from prmon json
[2025-02-26 04:06:19] 2025-02-26 03:05:59,132 | INFO     | extracted standard memory fields from prmon json
[2025-02-26 04:06:19] 2025-02-26 03:05:59,132 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-26 04:06:19] 2025-02-26 03:05:59,133 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-26 04:06:19] 2025-02-26 03:05:59,133 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-26 04:06:19] 2025-02-26 03:05:59,134 | INFO     | fitting pss+swap vs Time
[2025-02-26 04:06:19] 2025-02-26 03:05:59,134 | INFO     | model: linear, x: [1740536872.0, 1740536933.0, 1740536994.0, 1740537055.0, 1740537116.0, 1740537177.0, 1740537238.0, 1740537299.0, 1740537360.0, 1740537421.0, 1740
[2025-02-26 04:06:19] 2025-02-26 03:05:59,134 | INFO     | sum of square deviations: 14456085.0
[2025-02-26 04:06:19] 2025-02-26 03:05:59,134 | INFO     | sum of deviations: 1671873116.0
[2025-02-26 04:06:19] 2025-02-26 03:05:59,134 | INFO     | mean x: 1740537939.5
[2025-02-26 04:06:19] 2025-02-26 03:05:59,134 | INFO     | mean y: 3060068.6666666665
[2025-02-26 04:06:19] 2025-02-26 03:05:59,134 | INFO     | -- intersect: -201293389725.87207
[2025-02-26 04:06:19] 2025-02-26 03:05:59,134 | INFO     | intersect: -201293389725.87207
[2025-02-26 04:06:19] 2025-02-26 03:05:59,134 | INFO     | chi2: 0.18188813500585052
[2025-02-26 04:06:19] 2025-02-26 03:05:59,135 | INFO     | -- intersect: -201293389725.87207
[2025-02-26 04:06:19] 2025-02-26 03:05:59,135 | INFO     | current memory leak: 115.65 B/s (using 36 data points, chi2=0.18)
[2025-02-26 04:06:19] 2025-02-26 03:05:59,135 | INFO     | ..............................
[2025-02-26 04:06:19] 2025-02-26 03:05:59,135 | INFO     | . Timing measurements:
[2025-02-26 04:06:19] 2025-02-26 03:05:59,135 | INFO     | . get job = 0 s
[2025-02-26 04:06:19] 2025-02-26 03:05:59,135 | INFO     | . initial setup = 1 s
[2025-02-26 04:06:19] 2025-02-26 03:05:59,135 | INFO     | . payload setup = 3 s
[2025-02-26 04:06:19] 2025-02-26 03:05:59,135 | INFO     | . stage-in = 0 s
[2025-02-26 04:06:19] 2025-02-26 03:05:59,135 | INFO     | . payload execution = 2586 s
[2025-02-26 04:06:19] 2025-02-26 03:05:59,135 | INFO     | . stage-out = 0 s
[2025-02-26 04:06:19] 2025-02-26 03:05:59,135 | INFO     | . log creation = 0 s
[2025-02-26 04:06:19] 2025-02-26 03:05:59,136 | INFO     | ..............................
[2025-02-26 04:06:19] 2025-02-26 03:05:59,183 | INFO     | 
[2025-02-26 04:06:19] 2025-02-26 03:05:59,183 | INFO     | job summary report
[2025-02-26 04:06:19] 2025-02-26 03:05:59,184 | INFO     | --------------------------------------------------
[2025-02-26 04:06:19] 2025-02-26 03:05:59,184 | INFO     | PanDA job id: 6531137094
[2025-02-26 04:06:19] 2025-02-26 03:05:59,184 | INFO     | task id: 43401163
[2025-02-26 04:06:19] 2025-02-26 03:05:59,184 | INFO     | errors: (none)
[2025-02-26 04:06:19] 2025-02-26 03:05:59,184 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 04:06:19] 2025-02-26 03:05:59,184 | INFO     | pilot state: finished 
[2025-02-26 04:06:19] 2025-02-26 03:05:59,184 | INFO     | transexitcode: 0
[2025-02-26 04:06:19] 2025-02-26 03:05:59,184 | INFO     | exeerrorcode: 0
[2025-02-26 04:06:19] 2025-02-26 03:05:59,184 | INFO     | exeerrordiag: 
[2025-02-26 04:06:19] 2025-02-26 03:05:59,184 | INFO     | exitcode: 0
[2025-02-26 04:06:19] 2025-02-26 03:05:59,184 | INFO     | exitmsg: OK
[2025-02-26 04:06:19] 2025-02-26 03:05:59,184 | INFO     | cpuconsumptiontime: 25000 s
[2025-02-26 04:06:19] 2025-02-26 03:05:59,184 | INFO     | nevents: 400
[2025-02-26 04:06:19] 2025-02-26 03:05:59,184 | INFO     | neventsw: 0
[2025-02-26 04:06:19] 2025-02-26 03:05:59,184 | INFO     | pid: 2518798
[2025-02-26 04:06:19] 2025-02-26 03:05:59,185 | INFO     | pgrp: 2518798
[2025-02-26 04:06:19] 2025-02-26 03:05:59,185 | INFO     | corecount: 12
[2025-02-26 04:06:19] 2025-02-26 03:05:59,185 | INFO     | event service: False
[2025-02-26 04:06:19] 2025-02-26 03:05:59,185 | INFO     | sizes: {0: 2370276, 3: 2370596, 11: 2370624, 2593: 2395780, 2594: 2404790, 2596: 2404790, 2599: 2405088}
[2025-02-26 04:06:19] 2025-02-26 03:05:59,185 | INFO     | --------------------------------------------------
[2025-02-26 04:06:19] 2025-02-26 03:05:59,185 | INFO     | 
[2025-02-26 04:06:19] 2025-02-26 03:05:59,185 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-02-26 04:06:19] 2025-02-26 03:05:59,198 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 04:06:19] 2025-02-26 03:05:59,198 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 04:06:19] 2025-02-26 03:05:59,198 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 04:06:19] 2025-02-26 03:05:59,198 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 04:06:19] 2025-02-26 03:05:59,198 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 04:06:19] 2025-02-26 03:05:59,198 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 04:06:19] 2025-02-26 03:05:59,198 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 04:06:19] 2025-02-26 03:05:59,198 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 04:06:19] 2025-02-26 03:05:59,199 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 04:06:19] 2025-02-26 03:05:59,199 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 04:06:19] 2025-02-26 03:05:59,199 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 04:06:19] 2025-02-26 03:05:59,199 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 04:06:19] 2025-02-26 03:05:59,199 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 04:06:19] 2025-02-26 03:05:59,199 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 04:06:19] 2025-02-26 03:05:59,199 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 04:06:19] 2025-02-26 03:05:59,199 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 04:06:19] 2025-02-26 03:05:59,199 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 04:06:19] 2025-02-26 03:05:59,199 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 04:06:19] 2025-02-26 03:05:59,199 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 04:06:19] 2025-02-26 03:05:59,199 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 04:06:19] 2025-02-26 03:05:59,199 | INFO     | job 6531137094 has completed (purged errors)
[2025-02-26 04:06:19] 2025-02-26 03:05:59,200 | INFO     | overall cleanup function is called
[2025-02-26 04:06:19] 2025-02-26 03:06:00,206 | INFO     | --- collectZombieJob: --- 10, [2518798]
[2025-02-26 04:06:19] 2025-02-26 03:06:00,206 | INFO     | zombie collector waiting for pid 2518798
[2025-02-26 04:06:19] 2025-02-26 03:06:00,207 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 04:06:19] 2025-02-26 03:06:00,207 | INFO     | collected zombie processes
[2025-02-26 04:06:19] 2025-02-26 03:06:00,207 | INFO     | will attempt to kill all subprocesses of pid=2518798
[2025-02-26 04:06:19] 2025-02-26 03:06:00,259 | INFO     | process IDs to be killed: [2518798] (in reverse order)
[2025-02-26 04:06:19] 2025-02-26 03:06:00,311 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 04:06:19] 2025-02-26 03:06:00,312 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 04:06:19] 2025-02-26 03:06:00,322 | INFO     | did not find any defunct processes belonging to 2518798
[2025-02-26 04:06:19] 2025-02-26 03:06:00,330 | INFO     | did not find any defunct processes belonging to 2518798
[2025-02-26 04:06:19] 2025-02-26 03:06:00,331 | INFO     | ready for new job
[2025-02-26 04:06:19] 2025-02-26 03:06:00,331 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 04:06:19] 2025-02-26 03:06:00,332 | INFO     | **************************************
[2025-02-26 04:06:19] 2025-02-26 03:06:00,332 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 04:06:19] 2025-02-26 03:06:00,333 | INFO     | **************************************
[2025-02-26 04:06:19] 2025-02-26 03:06:00,333 | INFO     | 
[2025-02-26 04:06:19] 2025-02-26 03:06:00,336 | INFO     | architecture information:
[2025-02-26 04:06:19] 2025-02-26 03:06:00,336 | INFO     | executing command: cat /etc/os-release
[2025-02-26 04:06:19] 2025-02-26 03:06:00,346 | INFO     | cat /etc/os-release:
[2025-02-26 04:06:19] NAME="CentOS Linux"
[2025-02-26 04:06:19] VERSION="7 (Core)"
[2025-02-26 04:06:19] ID="centos"
[2025-02-26 04:06:19] ID_LIKE="rhel fedora"
[2025-02-26 04:06:19] VERSION_ID="7"
[2025-02-26 04:06:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 04:06:19] ANSI_COLOR="0;31"
[2025-02-26 04:06:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 04:06:19] HOME_URL="https://www.centos.org/"
[2025-02-26 04:06:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 04:06:19] 
[2025-02-26 04:06:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 04:06:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 04:06:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 04:06:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 04:06:19] 
[2025-02-26 04:06:19] 2025-02-26 03:06:00,346 | INFO     | **************************************
[2025-02-26 04:06:19] 2025-02-26 03:06:00,849 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-02-26 04:06:19] 2025-02-26 03:06:00,862 | INFO     | sufficient remaining disk space (475170603008 B)
[2025-02-26 04:06:19] 2025-02-26 03:06:00,862 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 04:06:19] 2025-02-26 03:06:00,862 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 04:06:19] 2025-02-26 03:06:00,863 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 04:06:19] 2025-02-26 03:06:00,863 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-26 04:06:19] 2025-02-26 03:06:00,863 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 04:06:19] 2025-02-26 03:06:00,863 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 04:06:19] 2025-02-26 03:06:00,864 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 04:06:19] 2025-02-26 03:06:00,864 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 04:06:19] 2025-02-26 03:06:01,605 | INFO     | all job control threads have been joined
[2025-02-26 04:06:19] 2025-02-26 03:06:01,824 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 04:06:19] 2025-02-26 03:06:01,824 | INFO     | aborting loop
[2025-02-26 04:06:19] 2025-02-26 03:06:01,868 | INFO     | [job] retrieve thread has finished
[2025-02-26 04:06:19] 2025-02-26 03:06:01,869 | INFO     | [job] queue monitor thread has finished
[2025-02-26 04:06:19] 2025-02-26 03:06:01,895 | INFO     | all data control threads have been joined
[2025-02-26 04:06:19] 2025-02-26 03:06:02,077 | INFO     | [payload] failed_post thread has finished
[2025-02-26 04:06:19] 2025-02-26 03:06:02,101 | INFO     | all payload control threads have been joined
[2025-02-26 04:06:19] 2025-02-26 03:06:02,158 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 04:06:19] 2025-02-26 03:06:02,370 | INFO     | [data] copytool_in thread has finished
[2025-02-26 04:06:19] 2025-02-26 03:06:02,537 | INFO     | [job] validate thread has finished
[2025-02-26 04:06:19] 2025-02-26 03:06:02,611 | INFO     | [job] control thread has finished
[2025-02-26 04:06:19] 2025-02-26 03:06:02,630 | INFO     | [payload] validate_post thread has finished
[2025-02-26 04:06:19] 2025-02-26 03:06:02,667 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 04:06:19] 2025-02-26 03:06:02,794 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 04:06:19] 2025-02-26 03:06:02,829 | INFO     | [job] job monitor thread has finished
[2025-02-26 04:06:19] 2025-02-26 03:06:02,868 | INFO     | [data] copytool_out thread has finished
[2025-02-26 04:06:19] 2025-02-26 03:06:02,901 | INFO     | [data] control thread has finished
[2025-02-26 04:06:19] 2025-02-26 03:06:03,106 | INFO     | [payload] control thread has finished
[2025-02-26 04:06:19] 2025-02-26 03:06:03,276 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 04:06:19] 2025-02-26 03:06:06,164 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 04:06:19] 2025-02-26 03:06:11,058 | INFO     | job.realtimelogging is not enabled
[2025-02-26 04:06:19] 2025-02-26 03:06:12,063 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 04:06:19] 2025-02-26 03:06:13,828 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126431725975360)>', '<ExcThread(monitor, started 126431310907136)>']
[2025-02-26 04:06:19] 2025-02-26 03:06:13,929 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 04:06:19] 2025-02-26 03:06:13,930 | INFO     | [monitor] control thread has ended
[2025-02-26 04:06:19] 2025-02-26 03:06:18,853 | INFO     | all workflow threads have been joined
[2025-02-26 04:06:19] 2025-02-26 03:06:18,853 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 04:06:19] 2025-02-26 03:06:18,853 | INFO     | traces error code: 0
[2025-02-26 04:06:19] 2025-02-26 03:06:18,854 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 04:06:19] 2025-02-26 03:06:18,930 [wrapper] ==== pilot stdout END ====
[2025-02-26 04:06:19] 2025-02-26 03:06:18,932 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 04:06:19] 2025-02-26 03:06:18,934 [wrapper] pilotpid: 2511361
[2025-02-26 04:06:19] 2025-02-26 03:06:18,936 [wrapper] Pilot exit status: 0
[2025-02-26 04:06:19] 2025-02-26 03:06:18,942 [wrapper] pandaids: 6531137094
[2025-02-26 04:06:19] 2025-02-26 03:06:18,976 [wrapper] cleanup supervisor_pilot 2587538 2511362
[2025-02-26 04:06:19] 2025-02-26 03:06:18,978 [wrapper] Test setup, not cleaning
[2025-02-26 04:06:19] 2025-02-26 03:06:18,982 [wrapper] apfmon messages muted
[2025-02-26 04:06:19] 2025-02-26 03:06:18,983 [wrapper] ==== wrapper stdout END ====
[2025-02-26 04:06:19] 2025-02-26 03:06:18,985 [wrapper] ==== wrapper stderr END ====
[2025-02-26 04:06:19]  *** Error codes and diagnostics ***
[2025-02-26 04:06:19]     "exeErrorCode": 0,
[2025-02-26 04:06:19]     "exeErrorDiag": "",
[2025-02-26 04:06:19]     "pilotErrorCode": 0,
[2025-02-26 04:06:19]     "pilotErrorDiag": "",
[2025-02-26 04:06:19]  *** Listing of results directory ***
[2025-02-26 04:06:19] total 430257
[2025-02-26 04:06:19] -rw-r--r-- 1 boinc boinc      5118 Feb 26 00:33 queuedata.json
[2025-02-26 04:06:19] -rwx------ 1 boinc boinc     35865 Feb 26 00:33 runpilot2-wrapper.sh
[2025-02-26 04:06:19] -rw-r--r-- 1 boinc boinc    491065 Feb 26 00:33 pilot3.tar.gz
[2025-02-26 04:06:19] -rw-r--r-- 1 boinc boinc       100 Feb 26 03:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 04:06:19] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 03:22 run_atlas
[2025-02-26 04:06:19] -rw-r--r-- 1 boinc boinc       105 Feb 26 03:22 job.xml
[2025-02-26 04:06:19] -rw-r--r-- 2 boinc boinc 250748956 Feb 26 03:22 EVNT.43401161._000084.pool.root.1
[2025-02-26 04:06:19] -rw-r--r-- 1 boinc boinc      6803 Feb 26 03:22 init_data.xml
[2025-02-26 04:06:19] -rw-r--r-- 2 boinc boinc     17569 Feb 26 03:22 start_atlas.sh
[2025-02-26 04:06:19] drwxrwx--x 2 boinc boinc         5 Feb 26 03:22 shared
[2025-02-26 04:06:19] -rw-r--r-- 2 boinc boinc    503555 Feb 26 03:22 input.tar.gz
[2025-02-26 04:06:19] -rw-r--r-- 1 boinc boinc         0 Feb 26 03:22 boinc_lockfile
[2025-02-26 04:06:19] -rw-r--r-- 1 boinc boinc      2541 Feb 26 03:22 pandaJob.out
[2025-02-26 04:06:19] -rw------- 1 boinc boinc       459 Feb 26 03:22 setup.sh.local
[2025-02-26 04:06:19] -rw------- 1 boinc boinc    987482 Feb 26 03:22 agis_schedconf.cvmfs.json
[2025-02-26 04:06:19] -rw------- 1 boinc boinc   1573632 Feb 26 03:22 agis_ddmendpoints.agis.ALL.json
[2025-02-26 04:06:19] drwx------ 4 boinc boinc        20 Feb 26 03:22 pilot3
[2025-02-26 04:06:19] -rw------- 1 boinc boinc        95 Feb 26 04:05 pilot_heartbeat.json
[2025-02-26 04:06:19] -rw------- 1 boinc boinc 187587866 Feb 26 04:05 HITS.43401163._002141.pool.root.1
[2025-02-26 04:06:19] -rw-r--r-- 1 boinc boinc       529 Feb 26 04:05 boinc_task_state.xml
[2025-02-26 04:06:19] -rw------- 1 boinc boinc      1042 Feb 26 04:05 memory_monitor_summary.json
[2025-02-26 04:06:19] -rw------- 1 boinc boinc    352361 Feb 26 04:05 log.43401163._002141.job.log.tgz.1
[2025-02-26 04:06:19] -rw------- 1 boinc boinc      7702 Feb 26 04:05 heartbeat.json
[2025-02-26 04:06:19] -rw-r--r-- 1 boinc boinc        27 Feb 26 04:06 wrapper_checkpoint.txt
[2025-02-26 04:06:19] -rw-r--r-- 1 boinc boinc      8192 Feb 26 04:06 boinc_mmap_file
[2025-02-26 04:06:19] -rw------- 1 boinc boinc      4418 Feb 26 04:06 pilotlog.txt
[2025-02-26 04:06:19] -rw------- 1 boinc boinc    286305 Feb 26 04:06 log.43401163._002141.job.log.1
[2025-02-26 04:06:19] -rw------- 1 boinc boinc       357 Feb 26 04:06 output.list
[2025-02-26 04:06:19] -rw-r--r-- 1 boinc boinc       620 Feb 26 04:06 runtime_log
[2025-02-26 04:06:19] -rw------- 1 boinc boinc    655360 Feb 26 04:06 result.tar.gz
[2025-02-26 04:06:19] -rw-r--r-- 1 boinc boinc     11442 Feb 26 04:06 runtime_log.err
[2025-02-26 04:06:19] -rw------- 1 boinc boinc       645 Feb 26 04:06 DgBNDmlbJ76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmTjgKDmS4jrfn.diag
[2025-02-26 04:06:19] -rw-r--r-- 1 boinc boinc     21083 Feb 26 04:06 stderr.txt
[2025-02-26 04:06:19] HITS file was successfully produced:
[2025-02-26 04:06:19] -rw------- 1 boinc boinc 187587866 Feb 26 04:05 shared/HITS.pool.root.1
[2025-02-26 04:06:19]  *** Contents of shared directory: ***
[2025-02-26 04:06:19] total 428887
[2025-02-26 04:06:19] -rw-r--r-- 2 boinc boinc 250748956 Feb 26 03:22 ATLAS.root_0
[2025-02-26 04:06:19] -rw-r--r-- 2 boinc boinc     17569 Feb 26 03:22 start_atlas.sh
[2025-02-26 04:06:19] -rw-r--r-- 2 boinc boinc    503555 Feb 26 03:22 input.tar.gz
[2025-02-26 04:06:19] -rw------- 1 boinc boinc 187587866 Feb 26 04:05 HITS.pool.root.1
[2025-02-26 04:06:19] -rw------- 1 boinc boinc    655360 Feb 26 04:06 result.tar.gz
04:06:21 (2507378): run_atlas exited; CPU time 24992.534734
04:06:21 (2507378): called boinc_finish(0)

</stderr_txt>
]]>

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