Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:17:17 (618366): wrapper (7.7.26015): starting
04:17:17 (618366): wrapper: running run_atlas (--nthreads 3)
[2025-02-26 04:17:17] Arguments: --nthreads 3
[2025-02-26 04:17:17] Threads: 3
[2025-02-26 04:17:17] Checking for CVMFS
[2025-02-26 04:17:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-26 04:17:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-26 04:17:17] Running cvmfs_config stat atlas.cern.ch
[2025-02-26 04:17:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-26 04:17:17] 2.9.2.0 116905 995 68448 143061 2 55 6743612 36864000 0 130560 0 996133 99.991 288978 10272 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-02-26 04:17:17] CVMFS is ok
[2025-02-26 04:17:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-26 04:17:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-26 04:17:17] Further information can be found at the LHC@home message board.
[2025-02-26 04:17:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 04:17:17] Checking for apptainer binary...
[2025-02-26 04:17:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-26 04:17:17] Running /usr/bin/apptainer --version
[2025-02-26 04:17:17] apptainer version 1.3.0-2.1
[2025-02-26 04:17:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 04:17:17] madmaxA273
[2025-02-26 04:17:17] apptainer works
[2025-02-26 04:17:17] Set ATHENA_PROC_NUMBER=3
[2025-02-26 04:17:17] Set ATHENA_CORE_NUMBER=3
[2025-02-26 04:17:17] Starting ATLAS job with PandaID=6531136602
[2025-02-26 04:17:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 05:47:13]  *** The last 200 lines of the pilot log: ***
[2025-02-26 05:47:13]  guid=40c2009b-14ff-4c22-8841-511925023867
[2025-02-26 05:47:13]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-26 05:47:13]  is_altstaged=None
[2025-02-26 05:47:13]  is_tar=False
[2025-02-26 05:47:13]  lfn=log.43401163._001950.job.log.tgz.1
[2025-02-26 05:47:13]  mtime=0
[2025-02-26 05:47:13]  protocol_id=None
[2025-02-26 05:47:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-26 05:47:13]  replicas=None
[2025-02-26 05:47:13]  scope=mc23_13p6TeV
[2025-02-26 05:47:13]  status=None
[2025-02-26 05:47:13]  status_code=0
[2025-02-26 05:47:13]  storage_token=
[2025-02-26 05:47:13]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6531136602/log.43401163._001950.job.log.tgz.1
[2025-02-26 05:47:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/23/log.43401163._001950.job.log.tgz.1
[2025-02-26 05:47:13]  workdir=None
[2025-02-26 05:47:13] ]
[2025-02-26 05:47:13] 2025-02-26 04:46:52,175 | INFO     | transferring file log.43401163._001950.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6531136602/log.43401163._001950.job.log.tgz.1 to /local/data/boinc/
[2025-02-26 05:47:13] 2025-02-26 04:46:52,175 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6531136602/log.43401163._001950.job.log.tgz.1 /local/data/boinc/slots/0/log.43401163._0019
[2025-02-26 05:47:13] 2025-02-26 04:46:52,187 | INFO     | adding to output.list: log.43401163._001950.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/23/log.43401163._001950.job.log.tg
[2025-02-26 05:47:13] 2025-02-26 04:46:52,188 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-26 05:47:13] 2025-02-26 04:46:52,188 | INFO     | summary of transferred files:
[2025-02-26 05:47:13] 2025-02-26 04:46:52,188 | INFO     |  -- lfn=log.43401163._001950.job.log.tgz.1, status_code=0, status=transferred
[2025-02-26 05:47:13] 2025-02-26 04:46:52,188 | INFO     | stage-out finished correctly
[2025-02-26 05:47:13] 2025-02-26 04:46:52,217 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-26 05:47:13] 2025-02-26 04:46:52,243 | INFO     | job 6531136602 has state=finished
[2025-02-26 05:47:13] 2025-02-26 04:46:52,243 | INFO     | preparing for final server update for job 6531136602 in state='finished'
[2025-02-26 05:47:13] 2025-02-26 04:46:52,244 | INFO     | this job has now completed (state=finished)
[2025-02-26 05:47:13] 2025-02-26 04:46:52,244 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-26 05:47:13] 2025-02-26 04:46:52,244 | INFO     | log transfer has been attempted: DONE
[2025-02-26 05:47:13] 2025-02-26 04:46:52,244 | INFO     | job 6531136602 has finished - writing final server update
[2025-02-26 05:47:13] 2025-02-26 04:46:52,244 | INFO     | total number of processed events: 400 (read)
[2025-02-26 05:47:13] 2025-02-26 04:46:52,245 | INFO     | executing command: lscpu
[2025-02-26 05:47:13] 2025-02-26 04:46:52,257 | INFO     | found 6 cores (6 cores per socket, 1 sockets)
[2025-02-26 05:47:13] 2025-02-26 04:46:52,265 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-26 05:47:13] 2025-02-26 04:46:55,402 | INFO     | PID=622007 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-02-26 05:47:13] 2025-02-26 04:46:55,712 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-26 05:47:13] 2025-02-26 04:46:55,713 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6531136602/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 05:47:13] 2025-02-26 04:46:55,713 | INFO     | extracted standard info from prmon json
[2025-02-26 05:47:13] 2025-02-26 04:46:55,713 | INFO     | extracted standard memory fields from prmon json
[2025-02-26 05:47:13] 2025-02-26 04:46:55,713 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-26 05:47:13] 2025-02-26 04:46:55,713 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-26 05:47:13] 2025-02-26 04:46:55,713 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-26 05:47:13] 2025-02-26 04:46:55,714 | INFO     | fitting pss+swap vs Time
[2025-02-26 05:47:13] 2025-02-26 04:46:55,714 | INFO     | model: linear, x: [1740540166.0, 1740540227.0, 1740540288.0, 1740540349.0, 1740540410.0, 1740540471.0, 1740540532.0, 1740540593.0, 1740540654.0, 1740540715.0, 1740
[2025-02-26 05:47:13] 2025-02-26 04:46:55,714 | INFO     | sum of square deviations: 164765880.0
[2025-02-26 05:47:13] 2025-02-26 04:46:55,714 | INFO     | sum of deviations: 1289732882.000002
[2025-02-26 05:47:13] 2025-02-26 04:46:55,714 | INFO     | mean x: 1740542606.0
[2025-02-26 05:47:13] 2025-02-26 04:46:55,714 | INFO     | mean y: 2499528.7901234566
[2025-02-26 05:47:13] 2025-02-26 04:46:55,714 | INFO     | -- intersect: -13621893042.536985
[2025-02-26 05:47:13] 2025-02-26 04:46:55,715 | INFO     | intersect: -13621893042.536985
[2025-02-26 05:47:13] 2025-02-26 04:46:55,715 | INFO     | chi2: 1.6577978034017113
[2025-02-26 05:47:13] 2025-02-26 04:46:55,715 | INFO     | -- intersect: -13621893042.536985
[2025-02-26 05:47:13] 2025-02-26 04:46:55,715 | INFO     | current memory leak: 7.83 B/s (using 81 data points, chi2=1.66)
[2025-02-26 05:47:13] 2025-02-26 04:46:55,715 | INFO     | ..............................
[2025-02-26 05:47:13] 2025-02-26 04:46:55,715 | INFO     | . Timing measurements:
[2025-02-26 05:47:13] 2025-02-26 04:46:55,715 | INFO     | . get job = 0 s
[2025-02-26 05:47:13] 2025-02-26 04:46:55,715 | INFO     | . initial setup = 1 s
[2025-02-26 05:47:13] 2025-02-26 04:46:55,715 | INFO     | . payload setup = 2 s
[2025-02-26 05:47:13] 2025-02-26 04:46:55,715 | INFO     | . stage-in = 0 s
[2025-02-26 05:47:13] 2025-02-26 04:46:55,715 | INFO     | . payload execution = 5350 s
[2025-02-26 05:47:13] 2025-02-26 04:46:55,715 | INFO     | . stage-out = 0 s
[2025-02-26 05:47:13] 2025-02-26 04:46:55,715 | INFO     | . log creation = 0 s
[2025-02-26 05:47:13] 2025-02-26 04:46:55,715 | INFO     | ..............................
[2025-02-26 05:47:13] 2025-02-26 04:46:55,744 | INFO     | 
[2025-02-26 05:47:13] 2025-02-26 04:46:55,744 | INFO     | job summary report
[2025-02-26 05:47:13] 2025-02-26 04:46:55,744 | INFO     | --------------------------------------------------
[2025-02-26 05:47:13] 2025-02-26 04:46:55,744 | INFO     | PanDA job id: 6531136602
[2025-02-26 05:47:13] 2025-02-26 04:46:55,744 | INFO     | task id: 43401163
[2025-02-26 05:47:13] 2025-02-26 04:46:55,744 | INFO     | errors: (none)
[2025-02-26 05:47:13] 2025-02-26 04:46:55,744 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 05:47:13] 2025-02-26 04:46:55,744 | INFO     | pilot state: finished 
[2025-02-26 05:47:13] 2025-02-26 04:46:55,745 | INFO     | transexitcode: 0
[2025-02-26 05:47:13] 2025-02-26 04:46:55,745 | INFO     | exeerrorcode: 0
[2025-02-26 05:47:13] 2025-02-26 04:46:55,745 | INFO     | exeerrordiag: 
[2025-02-26 05:47:13] 2025-02-26 04:46:55,745 | INFO     | exitcode: 0
[2025-02-26 05:47:13] 2025-02-26 04:46:55,745 | INFO     | exitmsg: OK
[2025-02-26 05:47:13] 2025-02-26 04:46:55,745 | INFO     | cpuconsumptiontime: 14183 s
[2025-02-26 05:47:13] 2025-02-26 04:46:55,745 | INFO     | nevents: 400
[2025-02-26 05:47:13] 2025-02-26 04:46:55,745 | INFO     | neventsw: 0
[2025-02-26 05:47:13] 2025-02-26 04:46:55,745 | INFO     | pid: 628521
[2025-02-26 05:47:13] 2025-02-26 04:46:55,745 | INFO     | pgrp: 628521
[2025-02-26 05:47:13] 2025-02-26 04:46:55,745 | INFO     | corecount: 3
[2025-02-26 05:47:13] 2025-02-26 04:46:55,745 | INFO     | event service: False
[2025-02-26 05:47:13] 2025-02-26 04:46:55,745 | INFO     | sizes: {0: 2370386, 1: 2370386, 3: 2370620, 11: 2370648, 5356: 2397222, 5357: 2406353, 5360: 2406467}
[2025-02-26 05:47:13] 2025-02-26 04:46:55,745 | INFO     | --------------------------------------------------
[2025-02-26 05:47:13] 2025-02-26 04:46:55,745 | INFO     | 
[2025-02-26 05:47:13] 2025-02-26 04:46:55,745 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-02-26 05:47:13] 2025-02-26 04:46:55,757 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 05:47:13] 2025-02-26 04:46:55,757 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 05:47:13] 2025-02-26 04:46:55,757 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 05:47:13] 2025-02-26 04:46:55,757 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 05:47:13] 2025-02-26 04:46:55,757 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 05:47:13] 2025-02-26 04:46:55,757 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 05:47:13] 2025-02-26 04:46:55,757 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 05:47:13] 2025-02-26 04:46:55,758 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 05:47:13] 2025-02-26 04:46:55,758 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 05:47:13] 2025-02-26 04:46:55,758 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 05:47:13] 2025-02-26 04:46:55,758 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 05:47:13] 2025-02-26 04:46:55,758 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 05:47:13] 2025-02-26 04:46:55,758 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 05:47:13] 2025-02-26 04:46:55,758 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 05:47:13] 2025-02-26 04:46:55,758 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 05:47:13] 2025-02-26 04:46:55,758 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 05:47:13] 2025-02-26 04:46:55,758 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 05:47:13] 2025-02-26 04:46:55,758 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 05:47:13] 2025-02-26 04:46:55,758 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 05:47:13] 2025-02-26 04:46:55,758 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 05:47:13] 2025-02-26 04:46:55,758 | INFO     | job 6531136602 has completed (purged errors)
[2025-02-26 05:47:13] 2025-02-26 04:46:55,758 | INFO     | overall cleanup function is called
[2025-02-26 05:47:13] 2025-02-26 04:46:56,760 | INFO     | --- collectZombieJob: --- 10, [628521]
[2025-02-26 05:47:13] 2025-02-26 04:46:56,760 | INFO     | zombie collector waiting for pid 628521
[2025-02-26 05:47:13] 2025-02-26 04:46:56,760 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 05:47:13] 2025-02-26 04:46:56,760 | INFO     | collected zombie processes
[2025-02-26 05:47:13] 2025-02-26 04:46:56,760 | INFO     | will attempt to kill all subprocesses of pid=628521
[2025-02-26 05:47:13] 2025-02-26 04:46:56,793 | INFO     | process IDs to be killed: [628521] (in reverse order)
[2025-02-26 05:47:13] 2025-02-26 04:46:56,817 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 05:47:13] 2025-02-26 04:46:56,817 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 05:47:13] 2025-02-26 04:46:56,818 | INFO     | did not find any defunct processes belonging to 628521
[2025-02-26 05:47:13] 2025-02-26 04:46:56,819 | INFO     | did not find any defunct processes belonging to 628521
[2025-02-26 05:47:13] 2025-02-26 04:46:56,819 | INFO     | ready for new job
[2025-02-26 05:47:13] 2025-02-26 04:46:56,819 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 05:47:13] 2025-02-26 04:46:56,820 | INFO     | **************************************
[2025-02-26 05:47:13] 2025-02-26 04:46:56,820 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 05:47:13] 2025-02-26 04:46:56,820 | INFO     | **************************************
[2025-02-26 05:47:13] 2025-02-26 04:46:56,820 | INFO     | 
[2025-02-26 05:47:13] 2025-02-26 04:46:56,820 | INFO     | architecture information:
[2025-02-26 05:47:13] 2025-02-26 04:46:56,821 | INFO     | executing command: cat /etc/os-release
[2025-02-26 05:47:13] 2025-02-26 04:46:56,829 | INFO     | cat /etc/os-release:
[2025-02-26 05:47:13] NAME="CentOS Linux"
[2025-02-26 05:47:13] VERSION="7 (Core)"
[2025-02-26 05:47:13] ID="centos"
[2025-02-26 05:47:13] ID_LIKE="rhel fedora"
[2025-02-26 05:47:13] VERSION_ID="7"
[2025-02-26 05:47:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 05:47:13] ANSI_COLOR="0;31"
[2025-02-26 05:47:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 05:47:13] HOME_URL="https://www.centos.org/"
[2025-02-26 05:47:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 05:47:13] 
[2025-02-26 05:47:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 05:47:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 05:47:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 05:47:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 05:47:13] 
[2025-02-26 05:47:13] 2025-02-26 04:46:56,829 | INFO     | **************************************
[2025-02-26 05:47:13] 2025-02-26 04:46:57,332 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-02-26 05:47:13] 2025-02-26 04:46:57,346 | INFO     | sufficient remaining disk space (350063951872 B)
[2025-02-26 05:47:13] 2025-02-26 04:46:57,346 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 05:47:13] 2025-02-26 04:46:57,346 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 05:47:13] 2025-02-26 04:46:57,346 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 05:47:13] 2025-02-26 04:46:57,407 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 05:47:13] 2025-02-26 04:46:57,407 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 05:47:13] 2025-02-26 04:46:57,407 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 05:47:13] 2025-02-26 04:46:57,687 | INFO     | all payload control threads have been joined
[2025-02-26 05:47:13] 2025-02-26 04:46:57,726 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 05:47:13] 2025-02-26 04:46:58,251 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 05:47:13] 2025-02-26 04:46:58,299 | WARNING  | process 628521 can no longer be monitored (due to stat problems) - aborting
[2025-02-26 05:47:13] 2025-02-26 04:46:58,329 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 05:47:13] 2025-02-26 04:46:58,350 | INFO     | [job] retrieve thread has finished
[2025-02-26 05:47:13] 2025-02-26 04:46:58,352 | INFO     | [job] queue monitor thread has finished
[2025-02-26 05:47:13] 2025-02-26 04:46:58,358 | INFO     | number of running child processes to parent process 628521: 1
[2025-02-26 05:47:13] 2025-02-26 04:46:58,358 | INFO     | maximum number of monitored processes: 6
[2025-02-26 05:47:13] 2025-02-26 04:46:58,358 | INFO     | aborting job monitoring since job object (job id=6531136602) has expired
[2025-02-26 05:47:13] 2025-02-26 04:46:58,358 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 05:47:13] 2025-02-26 04:46:58,358 | INFO     | will abort loop
[2025-02-26 05:47:13] 2025-02-26 04:46:58,366 | INFO     | all data control threads have been joined
[2025-02-26 05:47:13] 2025-02-26 04:46:58,381 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 05:47:13] 2025-02-26 04:46:58,417 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 05:47:13] 2025-02-26 04:46:58,595 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 05:47:13] 2025-02-26 04:46:58,690 | INFO     | [payload] control thread has finished
[2025-02-26 05:47:13] 2025-02-26 04:46:58,978 | INFO     | all job control threads have been joined
[2025-02-26 05:47:13] 2025-02-26 04:46:59,023 | INFO     | [payload] validate_post thread has finished
[2025-02-26 05:47:13] 2025-02-26 04:46:59,217 | INFO     | [data] copytool_in thread has finished
[2025-02-26 05:47:13] 2025-02-26 04:46:59,363 | INFO     | [job] job monitor thread has finished
[2025-02-26 05:47:13] 2025-02-26 04:46:59,370 | INFO     | [data] control thread has finished
[2025-02-26 05:47:13] 2025-02-26 04:46:59,732 | INFO     | [data] copytool_out thread has finished
[2025-02-26 05:47:13] 2025-02-26 04:46:59,784 | INFO     | [job] validate thread has finished
[2025-02-26 05:47:13] 2025-02-26 04:46:59,894 | INFO     | [payload] failed_post thread has finished
[2025-02-26 05:47:13] 2025-02-26 04:46:59,984 | INFO     | [job] control thread has finished
[2025-02-26 05:47:13] 2025-02-26 04:47:02,257 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 05:47:13] 2025-02-26 04:47:07,464 | INFO     | job.realtimelogging is not enabled
[2025-02-26 05:47:13] 2025-02-26 04:47:08,469 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 05:47:13] 2025-02-26 04:47:08,618 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140709446113088)>', '<ExcThread(monitor, started 140708891584256)>']
[2025-02-26 05:47:13] 2025-02-26 04:47:09,466 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 05:47:13] 2025-02-26 04:47:09,466 | INFO     | [monitor] control thread has ended
[2025-02-26 05:47:13] 2025-02-26 04:47:13,643 | INFO     | all workflow threads have been joined
[2025-02-26 05:47:13] 2025-02-26 04:47:13,644 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 05:47:13] 2025-02-26 04:47:13,644 | INFO     | traces error code: 0
[2025-02-26 05:47:13] 2025-02-26 04:47:13,644 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 05:47:13] 2025-02-26 04:47:13,694 [wrapper] ==== pilot stdout END ====
[2025-02-26 05:47:13] 2025-02-26 04:47:13,697 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 05:47:13] 2025-02-26 04:47:13,699 [wrapper] pilotpid: 622007
[2025-02-26 05:47:13] 2025-02-26 04:47:13,701 [wrapper] Pilot exit status: 0
[2025-02-26 05:47:13] 2025-02-26 04:47:13,708 [wrapper] pandaids: 6531136602
[2025-02-26 05:47:13] 2025-02-26 04:47:13,724 [wrapper] cleanup supervisor_pilot  658483 622008
[2025-02-26 05:47:13] 2025-02-26 04:47:13,726 [wrapper] Test setup, not cleaning
[2025-02-26 05:47:13] 2025-02-26 04:47:13,731 [wrapper] apfmon messages muted
[2025-02-26 05:47:13] 2025-02-26 04:47:13,733 [wrapper] ==== wrapper stdout END ====
[2025-02-26 05:47:13] 2025-02-26 04:47:13,735 [wrapper] ==== wrapper stderr END ====
[2025-02-26 05:47:13]  *** Error codes and diagnostics ***
[2025-02-26 05:47:13]     "exeErrorCode": 0,
[2025-02-26 05:47:13]     "exeErrorDiag": "",
[2025-02-26 05:47:13]     "pilotErrorCode": 0,
[2025-02-26 05:47:13]     "pilotErrorDiag": "",
[2025-02-26 05:47:13]  *** Listing of results directory ***
[2025-02-26 05:47:13] total 430696
[2025-02-26 05:47:13] -rw-r--r-- 1 boinc boinc    491065 Feb 26 00:30 pilot3.tar.gz
[2025-02-26 05:47:13] -rw-r--r-- 1 boinc boinc      5118 Feb 26 00:33 queuedata.json
[2025-02-26 05:47:13] -rwx------ 1 boinc boinc     35865 Feb 26 00:33 runpilot2-wrapper.sh
[2025-02-26 05:47:13] -rw-r--r-- 1 boinc boinc       100 Feb 26 04:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 05:47:13] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 04:17 run_atlas
[2025-02-26 05:47:13] -rw-r--r-- 1 boinc boinc       105 Feb 26 04:17 job.xml
[2025-02-26 05:47:13] -rw-r--r-- 2 boinc boinc     17569 Feb 26 04:17 start_atlas.sh
[2025-02-26 05:47:13] drwxrwx--x 2 boinc boinc      4096 Feb 26 04:17 shared
[2025-02-26 05:47:13] -rw-r--r-- 2 boinc boinc    503553 Feb 26 04:17 input.tar.gz
[2025-02-26 05:47:13] -rw-r--r-- 1 boinc boinc      6923 Feb 26 04:17 init_data.xml
[2025-02-26 05:47:13] -rw-r--r-- 2 boinc boinc 250650538 Feb 26 04:17 EVNT.43401161._000077.pool.root.1
[2025-02-26 05:47:13] -rw-r--r-- 1 boinc boinc         0 Feb 26 04:17 boinc_lockfile
[2025-02-26 05:47:13] -rw-r--r-- 1 boinc boinc      2541 Feb 26 04:17 pandaJob.out
[2025-02-26 05:47:13] -rw------- 1 boinc boinc       424 Feb 26 04:17 setup.sh.local
[2025-02-26 05:47:13] -rw------- 1 boinc boinc    987482 Feb 26 04:17 agis_schedconf.cvmfs.json
[2025-02-26 05:47:13] -rw------- 1 boinc boinc   1573632 Feb 26 04:17 agis_ddmendpoints.agis.ALL.json
[2025-02-26 05:47:13] drwx------ 4 boinc boinc      4096 Feb 26 04:17 pilot3
[2025-02-26 05:47:13] -rw-r--r-- 1 boinc boinc       529 Feb 26 05:46 boinc_task_state.xml
[2025-02-26 05:47:13] -rw------- 1 boinc boinc 185110488 Feb 26 05:46 HITS.43401163._001950.pool.root.1
[2025-02-26 05:47:13] -rw------- 1 boinc boinc      1022 Feb 26 05:46 memory_monitor_summary.json
[2025-02-26 05:47:13] -rw------- 1 boinc boinc        95 Feb 26 05:46 pilot_heartbeat.json
[2025-02-26 05:47:13] -rw------- 1 boinc boinc    222950 Feb 26 05:46 log.43401163._001950.job.log.tgz.1
[2025-02-26 05:47:13] -rw------- 1 boinc boinc      7683 Feb 26 05:46 heartbeat.json
[2025-02-26 05:47:13] -rw-r--r-- 1 boinc boinc      8192 Feb 26 05:47 boinc_mmap_file
[2025-02-26 05:47:13] -rw-r--r-- 1 boinc boinc        27 Feb 26 05:47 wrapper_checkpoint.txt
[2025-02-26 05:47:13] -rw------- 1 boinc boinc      4813 Feb 26 05:47 pilotlog.txt
[2025-02-26 05:47:13] -rw------- 1 boinc boinc    516685 Feb 26 05:47 log.43401163._001950.job.log.1
[2025-02-26 05:47:13] -rw------- 1 boinc boinc       357 Feb 26 05:47 output.list
[2025-02-26 05:47:13] -rw-r--r-- 1 boinc boinc       620 Feb 26 05:47 runtime_log
[2025-02-26 05:47:13] -rw------- 1 boinc boinc    757760 Feb 26 05:47 result.tar.gz
[2025-02-26 05:47:13] -rw-r--r-- 1 boinc boinc     11119 Feb 26 05:47 runtime_log.err
[2025-02-26 05:47:13] -rw------- 1 boinc boinc       663 Feb 26 05:47 UbyLDmbbJ76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmWggKDma9kcHm.diag
[2025-02-26 05:47:13] -rw-r--r-- 1 boinc boinc     21484 Feb 26 05:47 stderr.txt
[2025-02-26 05:47:13] HITS file was successfully produced:
[2025-02-26 05:47:13] -rw------- 1 boinc boinc 185110488 Feb 26 05:46 shared/HITS.pool.root.1
[2025-02-26 05:47:13]  *** Contents of shared directory: ***
[2025-02-26 05:47:13] total 426804
[2025-02-26 05:47:13] -rw-r--r-- 2 boinc boinc     17569 Feb 26 04:17 start_atlas.sh
[2025-02-26 05:47:13] -rw-r--r-- 2 boinc boinc    503553 Feb 26 04:17 input.tar.gz
[2025-02-26 05:47:13] -rw-r--r-- 2 boinc boinc 250650538 Feb 26 04:17 ATLAS.root_0
[2025-02-26 05:47:13] -rw------- 1 boinc boinc 185110488 Feb 26 05:46 HITS.pool.root.1
[2025-02-26 05:47:13] -rw------- 1 boinc boinc    757760 Feb 26 05:47 result.tar.gz
05:47:14 (618366): run_atlas exited; CPU time 14179.114719
05:47:14 (618366): called boinc_finish(0)

</stderr_txt>
]]>

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