Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
00:29:22 (1984193): wrapper (7.7.26015): starting
00:29:22 (1984193): wrapper: running run_atlas (--nthreads 12)
[2025-02-26 00:29:22] Arguments: --nthreads 12
[2025-02-26 00:29:22] Threads: 12
[2025-02-26 00:29:22] Checking for CVMFS
[2025-02-26 00:29:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-26 00:29:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-26 00:29:23] Running cvmfs_config stat atlas.cern.ch
[2025-02-26 00:29:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-26 00:29:23] 2.12.6.0 34541 618 55464 143056 1 56 5121689 6291457 921 130560 0 2384560 99.750 762075 1162 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.12.5:3128 1
[2025-02-26 00:29:23] CVMFS is ok
[2025-02-26 00:29:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 00:29:23] Checking for apptainer binary...
[2025-02-26 00:29:23] apptainer is not installed, using version from CVMFS
[2025-02-26 00:29:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 00:29:23] pm108
[2025-02-26 00:29:23] apptainer works
[2025-02-26 00:29:23] Set ATHENA_PROC_NUMBER=12
[2025-02-26 00:29:23] Set ATHENA_CORE_NUMBER=12
[2025-02-26 00:29:23] Starting ATLAS job with PandaID=6531059502
[2025-02-26 00:29:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 01:13:09]  *** The last 200 lines of the pilot log: ***
[2025-02-26 01:13:09]  guid=d4e468bf-5abf-421d-a7f0-db6aad736204
[2025-02-26 01:13:09]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-26 01:13:09]  is_altstaged=None
[2025-02-26 01:13:09]  is_tar=False
[2025-02-26 01:13:09]  lfn=log.43401155._000400.job.log.tgz.1
[2025-02-26 01:13:09]  mtime=0
[2025-02-26 01:13:09]  protocol_id=None
[2025-02-26 01:13:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-26 01:13:09]  replicas=None
[2025-02-26 01:13:09]  scope=mc23_13p6TeV
[2025-02-26 01:13:09]  status=None
[2025-02-26 01:13:09]  status_code=0
[2025-02-26 01:13:09]  storage_token=
[2025-02-26 01:13:09]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6531059502/log.43401155._000400.job.log.tgz.1
[2025-02-26 01:13:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/5a/log.43401155._000400.job.log.tgz.1
[2025-02-26 01:13:09]  workdir=None
[2025-02-26 01:13:09] ]
[2025-02-26 01:13:09] 2025-02-26 00:12:45,113 | INFO     | transferring file log.43401155._000400.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6531059502/log.43401155._000400.job.log.tgz.1 to /var/lib/boinc
[2025-02-26 01:13:09] 2025-02-26 00:12:45,113 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6531059502/log.43401155._000400.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.434011
[2025-02-26 01:13:09] 2025-02-26 00:12:45,124 | INFO     | adding to output.list: log.43401155._000400.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/5a/log.43401155._000400.job.log.tg
[2025-02-26 01:13:09] 2025-02-26 00:12:45,125 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-26 01:13:09] 2025-02-26 00:12:45,125 | INFO     | summary of transferred files:
[2025-02-26 01:13:09] 2025-02-26 00:12:45,125 | INFO     |  -- lfn=log.43401155._000400.job.log.tgz.1, status_code=0, status=transferred
[2025-02-26 01:13:09] 2025-02-26 00:12:45,125 | INFO     | stage-out finished correctly
[2025-02-26 01:13:09] 2025-02-26 00:12:45,303 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-26 01:13:09] 2025-02-26 00:12:46,530 | INFO     | PID=1988240 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-26 01:13:09] 2025-02-26 00:12:46,531 | INFO     | .. there are 2 such processes running
[2025-02-26 01:13:09] 2025-02-26 00:12:46,550 | INFO     | monitor loop #202: job 0:6531059502 is in state 'finished'
[2025-02-26 01:13:09] 2025-02-26 00:12:46,550 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 01:13:09] 2025-02-26 00:12:47,215 | INFO     | job 6531059502 has state=finished
[2025-02-26 01:13:09] 2025-02-26 00:12:47,216 | INFO     | preparing for final server update for job 6531059502 in state='finished'
[2025-02-26 01:13:09] 2025-02-26 00:12:47,216 | INFO     | this job has now completed (state=finished)
[2025-02-26 01:13:09] 2025-02-26 00:12:47,216 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-26 01:13:09] 2025-02-26 00:12:47,217 | INFO     | log transfer has been attempted: DONE
[2025-02-26 01:13:09] 2025-02-26 00:12:47,217 | INFO     | job 6531059502 has finished - writing final server update
[2025-02-26 01:13:09] 2025-02-26 00:12:47,217 | INFO     | total number of processed events: 400 (read)
[2025-02-26 01:13:09] 2025-02-26 00:12:47,221 | INFO     | executing command: lscpu
[2025-02-26 01:13:09] 2025-02-26 00:12:47,250 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2025-02-26 01:13:09] 2025-02-26 00:12:47,259 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-26 01:13:09] 2025-02-26 00:12:49,053 | INFO     | monitor loop #203: job 0:6531059502 is in state 'finished'
[2025-02-26 01:13:09] 2025-02-26 00:12:49,053 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 01:13:09] 2025-02-26 00:12:50,548 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-26 01:13:09] 2025-02-26 00:12:50,549 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6531059502/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 01:13:09] 2025-02-26 00:12:50,549 | INFO     | extracted standard info from prmon json
[2025-02-26 01:13:09] 2025-02-26 00:12:50,549 | INFO     | extracted standard memory fields from prmon json
[2025-02-26 01:13:09] 2025-02-26 00:12:50,549 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-26 01:13:09] 2025-02-26 00:12:50,550 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-26 01:13:09] 2025-02-26 00:12:50,550 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-26 01:13:09] 2025-02-26 00:12:50,551 | INFO     | fitting pss+swap vs Time
[2025-02-26 01:13:09] 2025-02-26 00:12:50,551 | INFO     | model: linear, x: [1740526495.0, 1740526556.0, 1740526617.0, 1740526678.0, 1740526739.0, 1740526800.0, 1740526861.0, 1740526922.0, 1740526983.0, 1740527044.0, 1740
[2025-02-26 01:13:09] 2025-02-26 00:12:50,551 | INFO     | sum of square deviations: 14456085.0
[2025-02-26 01:13:09] 2025-02-26 00:12:50,551 | INFO     | sum of deviations: 1890063863.5000002
[2025-02-26 01:13:09] 2025-02-26 00:12:50,551 | INFO     | mean x: 1740527562.5
[2025-02-26 01:13:09] 2025-02-26 00:12:50,551 | INFO     | mean y: 2882853.527777778
[2025-02-26 01:13:09] 2025-02-26 00:12:50,551 | INFO     | -- intersect: -227562758141.73395
[2025-02-26 01:13:09] 2025-02-26 00:12:50,551 | INFO     | intersect: -227562758141.73395
[2025-02-26 01:13:09] 2025-02-26 00:12:50,552 | INFO     | chi2: 0.09945360069265932
[2025-02-26 01:13:09] 2025-02-26 00:12:50,552 | INFO     | -- intersect: -227562758141.73395
[2025-02-26 01:13:09] 2025-02-26 00:12:50,552 | INFO     | current memory leak: 130.75 B/s (using 36 data points, chi2=0.10)
[2025-02-26 01:13:09] 2025-02-26 00:12:50,552 | INFO     | ..............................
[2025-02-26 01:13:09] 2025-02-26 00:12:50,552 | INFO     | . Timing measurements:
[2025-02-26 01:13:09] 2025-02-26 00:12:50,552 | INFO     | . get job = 0 s
[2025-02-26 01:13:09] 2025-02-26 00:12:50,552 | INFO     | . initial setup = 1 s
[2025-02-26 01:13:09] 2025-02-26 00:12:50,552 | INFO     | . payload setup = 3 s
[2025-02-26 01:13:09] 2025-02-26 00:12:50,552 | INFO     | . stage-in = 0 s
[2025-02-26 01:13:09] 2025-02-26 00:12:50,552 | INFO     | . payload execution = 2574 s
[2025-02-26 01:13:09] 2025-02-26 00:12:50,552 | INFO     | . stage-out = 0 s
[2025-02-26 01:13:09] 2025-02-26 00:12:50,553 | INFO     | . log creation = 0 s
[2025-02-26 01:13:09] 2025-02-26 00:12:50,553 | INFO     | ..............................
[2025-02-26 01:13:09] 2025-02-26 00:12:50,724 | INFO     | 
[2025-02-26 01:13:09] 2025-02-26 00:12:50,724 | INFO     | job summary report
[2025-02-26 01:13:09] 2025-02-26 00:12:50,724 | INFO     | --------------------------------------------------
[2025-02-26 01:13:09] 2025-02-26 00:12:50,724 | INFO     | PanDA job id: 6531059502
[2025-02-26 01:13:09] 2025-02-26 00:12:50,724 | INFO     | task id: 43401155
[2025-02-26 01:13:09] 2025-02-26 00:12:50,724 | INFO     | errors: (none)
[2025-02-26 01:13:09] 2025-02-26 00:12:50,724 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 01:13:09] 2025-02-26 00:12:50,724 | INFO     | pilot state: finished 
[2025-02-26 01:13:09] 2025-02-26 00:12:50,724 | INFO     | transexitcode: 0
[2025-02-26 01:13:09] 2025-02-26 00:12:50,724 | INFO     | exeerrorcode: 0
[2025-02-26 01:13:09] 2025-02-26 00:12:50,724 | INFO     | exeerrordiag: 
[2025-02-26 01:13:09] 2025-02-26 00:12:50,725 | INFO     | exitcode: 0
[2025-02-26 01:13:09] 2025-02-26 00:12:50,725 | INFO     | exitmsg: OK
[2025-02-26 01:13:09] 2025-02-26 00:12:50,725 | INFO     | cpuconsumptiontime: 25198 s
[2025-02-26 01:13:09] 2025-02-26 00:12:50,725 | INFO     | nevents: 400
[2025-02-26 01:13:09] 2025-02-26 00:12:50,725 | INFO     | neventsw: 0
[2025-02-26 01:13:09] 2025-02-26 00:12:50,725 | INFO     | pid: 1995638
[2025-02-26 01:13:09] 2025-02-26 00:12:50,725 | INFO     | pgrp: 1995638
[2025-02-26 01:13:09] 2025-02-26 00:12:50,725 | INFO     | corecount: 12
[2025-02-26 01:13:09] 2025-02-26 00:12:50,725 | INFO     | event service: False
[2025-02-26 01:13:09] 2025-02-26 00:12:50,725 | INFO     | sizes: {0: 2370384, 2: 2370590, 10: 2370618, 2581: 2395771, 2582: 2404782, 2588: 2404896}
[2025-02-26 01:13:09] 2025-02-26 00:12:50,725 | INFO     | --------------------------------------------------
[2025-02-26 01:13:09] 2025-02-26 00:12:50,725 | INFO     | 
[2025-02-26 01:13:09] 2025-02-26 00:12:50,725 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-02-26 01:13:09] 2025-02-26 00:12:50,739 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 01:13:09] 2025-02-26 00:12:50,740 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 01:13:09] 2025-02-26 00:12:50,740 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 01:13:09] 2025-02-26 00:12:50,740 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 01:13:09] 2025-02-26 00:12:50,740 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 01:13:09] 2025-02-26 00:12:50,740 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 01:13:09] 2025-02-26 00:12:50,740 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 01:13:09] 2025-02-26 00:12:50,740 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 01:13:09] 2025-02-26 00:12:50,740 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 01:13:09] 2025-02-26 00:12:50,740 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 01:13:09] 2025-02-26 00:12:50,740 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 01:13:09] 2025-02-26 00:12:50,740 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 01:13:09] 2025-02-26 00:12:50,741 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 01:13:09] 2025-02-26 00:12:50,741 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 01:13:09] 2025-02-26 00:12:50,741 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 01:13:09] 2025-02-26 00:12:50,741 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 01:13:09] 2025-02-26 00:12:50,741 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 01:13:09] 2025-02-26 00:12:50,741 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 01:13:09] 2025-02-26 00:12:50,741 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 01:13:09] 2025-02-26 00:12:50,741 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 01:13:09] 2025-02-26 00:12:50,741 | INFO     | job 6531059502 has completed (purged errors)
[2025-02-26 01:13:09] 2025-02-26 00:12:50,741 | INFO     | overall cleanup function is called
[2025-02-26 01:13:09] 2025-02-26 00:12:51,748 | INFO     | --- collectZombieJob: --- 10, [1995638]
[2025-02-26 01:13:09] 2025-02-26 00:12:51,748 | INFO     | zombie collector waiting for pid 1995638
[2025-02-26 01:13:09] 2025-02-26 00:12:51,748 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 01:13:09] 2025-02-26 00:12:51,748 | INFO     | collected zombie processes
[2025-02-26 01:13:09] 2025-02-26 00:12:51,748 | INFO     | will attempt to kill all subprocesses of pid=1995638
[2025-02-26 01:13:09] 2025-02-26 00:12:51,797 | INFO     | process IDs to be killed: [1995638] (in reverse order)
[2025-02-26 01:13:09] 2025-02-26 00:12:51,845 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 01:13:09] 2025-02-26 00:12:51,846 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 01:13:09] 2025-02-26 00:12:51,850 | INFO     | did not find any defunct processes belonging to 1995638
[2025-02-26 01:13:09] 2025-02-26 00:12:51,854 | INFO     | did not find any defunct processes belonging to 1995638
[2025-02-26 01:13:09] 2025-02-26 00:12:51,855 | INFO     | ready for new job
[2025-02-26 01:13:09] 2025-02-26 00:12:51,855 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 01:13:09] 2025-02-26 00:12:51,856 | INFO     | **************************************
[2025-02-26 01:13:09] 2025-02-26 00:12:51,856 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 01:13:09] 2025-02-26 00:12:51,856 | INFO     | **************************************
[2025-02-26 01:13:09] 2025-02-26 00:12:51,856 | INFO     | 
[2025-02-26 01:13:09] 2025-02-26 00:12:51,857 | INFO     | architecture information:
[2025-02-26 01:13:09] 2025-02-26 00:12:51,858 | INFO     | executing command: cat /etc/os-release
[2025-02-26 01:13:09] 2025-02-26 00:12:51,865 | INFO     | cat /etc/os-release:
[2025-02-26 01:13:09] NAME="CentOS Linux"
[2025-02-26 01:13:09] VERSION="7 (Core)"
[2025-02-26 01:13:09] ID="centos"
[2025-02-26 01:13:09] ID_LIKE="rhel fedora"
[2025-02-26 01:13:09] VERSION_ID="7"
[2025-02-26 01:13:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 01:13:09] ANSI_COLOR="0;31"
[2025-02-26 01:13:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 01:13:09] HOME_URL="https://www.centos.org/"
[2025-02-26 01:13:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 01:13:09] 
[2025-02-26 01:13:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 01:13:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 01:13:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 01:13:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 01:13:09] 
[2025-02-26 01:13:09] 2025-02-26 00:12:51,865 | INFO     | **************************************
[2025-02-26 01:13:09] 2025-02-26 00:12:52,368 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-02-26 01:13:09] 2025-02-26 00:12:52,378 | INFO     | sufficient remaining disk space (475087765504 B)
[2025-02-26 01:13:09] 2025-02-26 00:12:52,378 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 01:13:09] 2025-02-26 00:12:52,378 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 01:13:09] 2025-02-26 00:12:52,378 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 01:13:09] 2025-02-26 00:12:52,379 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 01:13:09] 2025-02-26 00:12:52,532 | INFO     | all data control threads have been joined
[2025-02-26 01:13:09] 2025-02-26 00:12:52,547 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 01:13:09] 2025-02-26 00:12:52,547 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 01:13:09] 2025-02-26 00:12:52,547 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 01:13:09] 2025-02-26 00:12:52,561 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 01:13:09] 2025-02-26 00:12:52,561 | INFO     | aborting loop
[2025-02-26 01:13:09] 2025-02-26 00:12:52,731 | INFO     | all job control threads have been joined
[2025-02-26 01:13:09] 2025-02-26 00:12:52,930 | INFO     | all payload control threads have been joined
[2025-02-26 01:13:09] 2025-02-26 00:12:53,184 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 01:13:09] 2025-02-26 00:12:53,384 | INFO     | [job] retrieve thread has finished
[2025-02-26 01:13:09] 2025-02-26 00:12:53,384 | INFO     | [job] queue monitor thread has finished
[2025-02-26 01:13:09] 2025-02-26 00:12:53,409 | INFO     | [payload] validate_post thread has finished
[2025-02-26 01:13:09] 2025-02-26 00:12:53,419 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 01:13:09] 2025-02-26 00:12:53,482 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 01:13:09] 2025-02-26 00:12:53,538 | INFO     | [data] control thread has finished
[2025-02-26 01:13:09] 2025-02-26 00:12:53,566 | INFO     | [job] job monitor thread has finished
[2025-02-26 01:13:09] 2025-02-26 00:12:53,604 | INFO     | [payload] failed_post thread has finished
[2025-02-26 01:13:09] 2025-02-26 00:12:53,737 | INFO     | [job] control thread has finished
[2025-02-26 01:13:09] 2025-02-26 00:12:53,935 | INFO     | [payload] control thread has finished
[2025-02-26 01:13:09] 2025-02-26 00:12:54,360 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 01:13:09] 2025-02-26 00:12:54,491 | INFO     | [data] copytool_in thread has finished
[2025-02-26 01:13:09] 2025-02-26 00:12:54,776 | INFO     | [job] validate thread has finished
[2025-02-26 01:13:09] 2025-02-26 00:12:55,189 | INFO     | [data] copytool_out thread has finished
[2025-02-26 01:13:09] 2025-02-26 00:12:56,384 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 01:13:09] 2025-02-26 00:13:03,177 | INFO     | job.realtimelogging is not enabled
[2025-02-26 01:13:09] 2025-02-26 00:13:04,183 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 01:13:09] 2025-02-26 00:13:04,279 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138369090074432)>', '<ExcThread(monitor, started 138368610469632)>']
[2025-02-26 01:13:09] 2025-02-26 00:13:04,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 01:13:09] 2025-02-26 00:13:04,604 | INFO     | [monitor] control thread has ended
[2025-02-26 01:13:09] 2025-02-26 00:13:09,304 | INFO     | all workflow threads have been joined
[2025-02-26 01:13:09] 2025-02-26 00:13:09,304 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 01:13:09] 2025-02-26 00:13:09,304 | INFO     | traces error code: 0
[2025-02-26 01:13:09] 2025-02-26 00:13:09,305 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 01:13:09] 2025-02-26 00:13:09,393 [wrapper] ==== pilot stdout END ====
[2025-02-26 01:13:09] 2025-02-26 00:13:09,395 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 01:13:09] 2025-02-26 00:13:09,397 [wrapper] pilotpid: 1988240
[2025-02-26 01:13:09] 2025-02-26 00:13:09,399 [wrapper] Pilot exit status: 0
[2025-02-26 01:13:09] 2025-02-26 00:13:09,405 [wrapper] pandaids: 6531059502
[2025-02-26 01:13:09] 2025-02-26 00:13:09,439 [wrapper] cleanup supervisor_pilot 2081168 1988241
[2025-02-26 01:13:09] 2025-02-26 00:13:09,440 [wrapper] Test setup, not cleaning
[2025-02-26 01:13:09] 2025-02-26 00:13:09,444 [wrapper] apfmon messages muted
[2025-02-26 01:13:09] 2025-02-26 00:13:09,445 [wrapper] ==== wrapper stdout END ====
[2025-02-26 01:13:09] 2025-02-26 00:13:09,447 [wrapper] ==== wrapper stderr END ====
[2025-02-26 01:13:09]  *** Error codes and diagnostics ***
[2025-02-26 01:13:09]     "exeErrorCode": 0,
[2025-02-26 01:13:09]     "exeErrorDiag": "",
[2025-02-26 01:13:09]     "pilotErrorCode": 0,
[2025-02-26 01:13:09]     "pilotErrorDiag": "",
[2025-02-26 01:13:09]  *** Listing of results directory ***
[2025-02-26 01:13:09] total 435417
[2025-02-26 01:13:09] -rw-r--r-- 1 boinc boinc    491065 Feb 25 23:04 pilot3.tar.gz
[2025-02-26 01:13:09] -rw-r--r-- 1 boinc boinc      5118 Feb 25 23:21 queuedata.json
[2025-02-26 01:13:09] -rwx------ 1 boinc boinc     35865 Feb 25 23:22 runpilot2-wrapper.sh
[2025-02-26 01:13:09] -rw-r--r-- 1 boinc boinc       100 Feb 26 00:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 01:13:09] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 00:29 run_atlas
[2025-02-26 01:13:09] -rw-r--r-- 1 boinc boinc       105 Feb 26 00:29 job.xml
[2025-02-26 01:13:09] -rw-r--r-- 2 boinc boinc 254501275 Feb 26 00:29 EVNT.43401153._000016.pool.root.1
[2025-02-26 01:13:09] -rw-r--r-- 1 boinc boinc      6823 Feb 26 00:29 init_data.xml
[2025-02-26 01:13:09] -rw-r--r-- 2 boinc boinc     17569 Feb 26 00:29 start_atlas.sh
[2025-02-26 01:13:09] drwxrwx--x 2 boinc boinc         5 Feb 26 00:29 shared
[2025-02-26 01:13:09] -rw-r--r-- 2 boinc boinc    503549 Feb 26 00:29 input.tar.gz
[2025-02-26 01:13:09] -rw-r--r-- 1 boinc boinc         0 Feb 26 00:29 boinc_lockfile
[2025-02-26 01:13:09] -rw-r--r-- 1 boinc boinc      2537 Feb 26 00:29 pandaJob.out
[2025-02-26 01:13:09] -rw------- 1 boinc boinc       459 Feb 26 00:29 setup.sh.local
[2025-02-26 01:13:09] -rw------- 1 boinc boinc    987490 Feb 26 00:29 agis_schedconf.cvmfs.json
[2025-02-26 01:13:09] -rw------- 1 boinc boinc   1573632 Feb 26 00:29 agis_ddmendpoints.agis.ALL.json
[2025-02-26 01:13:09] drwx------ 4 boinc boinc        20 Feb 26 00:29 pilot3
[2025-02-26 01:13:09] -rw------- 1 boinc boinc        95 Feb 26 01:12 pilot_heartbeat.json
[2025-02-26 01:13:09] -rw-r--r-- 1 boinc boinc       529 Feb 26 01:12 boinc_task_state.xml
[2025-02-26 01:13:09] -rw------- 1 boinc boinc 189121932 Feb 26 01:12 HITS.43401155._000400.pool.root.1
[2025-02-26 01:13:09] -rw------- 1 boinc boinc      1043 Feb 26 01:12 memory_monitor_summary.json
[2025-02-26 01:13:09] -rw------- 1 boinc boinc    358595 Feb 26 01:12 log.43401155._000400.job.log.tgz.1
[2025-02-26 01:13:09] -rw------- 1 boinc boinc      7700 Feb 26 01:12 heartbeat.json
[2025-02-26 01:13:09] -rw-r--r-- 1 boinc boinc        27 Feb 26 01:13 wrapper_checkpoint.txt
[2025-02-26 01:13:09] -rw------- 1 boinc boinc      4295 Feb 26 01:13 pilotlog.txt
[2025-02-26 01:13:09] -rw-r--r-- 1 boinc boinc      8192 Feb 26 01:13 boinc_mmap_file
[2025-02-26 01:13:09] -rw------- 1 boinc boinc    285936 Feb 26 01:13 log.43401155._000400.job.log.1
[2025-02-26 01:13:09] -rw------- 1 boinc boinc       357 Feb 26 01:13 output.list
[2025-02-26 01:13:09] -rw-r--r-- 1 boinc boinc       620 Feb 26 01:13 runtime_log
[2025-02-26 01:13:09] -rw------- 1 boinc boinc    665600 Feb 26 01:13 result.tar.gz
[2025-02-26 01:13:09] -rw------- 1 boinc boinc       645 Feb 26 01:13 1VHMDmUVI76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmrNgKDmglghUm.diag
[2025-02-26 01:13:09] -rw-r--r-- 1 boinc boinc     11442 Feb 26 01:13 runtime_log.err
[2025-02-26 01:13:09] -rw-r--r-- 1 boinc boinc     21212 Feb 26 01:13 stderr.txt
[2025-02-26 01:13:09] HITS file was successfully produced:
[2025-02-26 01:13:09] -rw------- 1 boinc boinc 189121932 Feb 26 01:12 shared/HITS.pool.root.1
[2025-02-26 01:13:09]  *** Contents of shared directory: ***
[2025-02-26 01:13:09] total 434051
[2025-02-26 01:13:09] -rw-r--r-- 2 boinc boinc 254501275 Feb 26 00:29 ATLAS.root_0
[2025-02-26 01:13:09] -rw-r--r-- 2 boinc boinc     17569 Feb 26 00:29 start_atlas.sh
[2025-02-26 01:13:09] -rw-r--r-- 2 boinc boinc    503549 Feb 26 00:29 input.tar.gz
[2025-02-26 01:13:09] -rw------- 1 boinc boinc 189121932 Feb 26 01:12 HITS.pool.root.1
[2025-02-26 01:13:09] -rw------- 1 boinc boinc    665600 Feb 26 01:13 result.tar.gz
01:13:10 (1984193): run_atlas exited; CPU time 25202.118504
01:13:10 (1984193): called boinc_finish(0)

</stderr_txt>
]]>

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