Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-25 23:29:37 (75480): Detected: vboxwrapper 26206
2025-02-25 23:29:37 (75480): Detected: BOINC client v8.0.2
2025-02-25 23:29:38 (75480): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2025-02-25 23:29:39 (75480): Successfully copied 'init_data.xml' to the shared directory.
2025-02-25 23:29:39 (75480): Create VM. (boinc_be0c3d394c350783, slot#5)
2025-02-25 23:29:40 (75480): Setting Memory Size for VM. (8000MB)
2025-02-25 23:29:40 (75480): Setting CPU Count for VM. (5)
2025-02-25 23:29:40 (75480): Setting Chipset Options for VM.
2025-02-25 23:29:40 (75480): Setting Graphics Controller Options for VM.
2025-02-25 23:29:41 (75480): Setting Boot Options for VM.
2025-02-25 23:29:41 (75480): Setting Network Configuration for NAT.
2025-02-25 23:29:41 (75480): Enabling VM Network Access.
2025-02-25 23:29:41 (75480): Disabling USB Support for VM.
2025-02-25 23:29:42 (75480): Disabling COM Port Support for VM.
2025-02-25 23:29:42 (75480): Disabling LPT Port Support for VM.
2025-02-25 23:29:42 (75480): Disabling Audio Support for VM.
2025-02-25 23:29:43 (75480): Disabling Clipboard Support for VM.
2025-02-25 23:29:43 (75480): Disabling Drag and Drop Support for VM.
2025-02-25 23:29:43 (75480): Adding storage controller(s) to VM.
2025-02-25 23:29:43 (75480): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-25 23:29:46 (75480): Adding VirtualBox Guest Additions to VM.
2025-02-25 23:29:46 (75480): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-25 23:29:47 (75480): forwarding host port 53160 to guest port 80
2025-02-25 23:29:47 (75480): Enabling remote desktop for VM.
2025-02-25 23:29:48 (75480): Enabling shared directory for VM.
2025-02-25 23:29:48 (75480): Starting VM using VBoxManage interface. (boinc_be0c3d394c350783, slot#5)
2025-02-25 23:29:56 (75480): Successfully started VM. (PID = '51700')
2025-02-25 23:29:56 (75480): Reporting VM Process ID to BOINC.
2025-02-25 23:29:56 (75480): Guest Log: BIOS: VirtualBox 7.0.14
2025-02-25 23:29:56 (75480): Guest Log: CPUID EDX: 0x178bfbff
2025-02-25 23:29:56 (75480): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-25 23:29:56 (75480): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-25 23:29:56 (75480): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-25 23:29:56 (75480): Detected: Web Application Enabled (http://localhost:53160)
2025-02-25 23:29:56 (75480): Detected: Remote Desktop Enabled (localhost:53161)
2025-02-25 23:29:56 (75480): Preference change detected
2025-02-25 23:29:56 (75480): Setting CPU throttle for VM. (100%)
2025-02-25 23:29:56 (75480): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-25 23:29:58 (75480): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-25 23:29:58 (75480): Guest Log: BIOS: Booting from Hard Disk...
2025-02-25 23:30:01 (75480): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-25 23:30:01 (75480): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-25 23:30:01 (75480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-25 23:30:10 (75480): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-25 23:30:10 (75480): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-25 23:30:45 (75480): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-25 23:30:45 (75480): Guest Log: 00:00:00.000204 main     Log opened 2025-02-25T23:30:43.835070000Z
2025-02-25 23:30:45 (75480): Guest Log: 00:00:00.000343 main     OS Product: Linux
2025-02-25 23:30:45 (75480): Guest Log: 00:00:00.000383 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-25 23:30:45 (75480): Guest Log: 00:00:00.000410 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-25 23:30:45 (75480): Guest Log: 00:00:00.000436 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-25 23:30:45 (75480): Guest Log: 00:00:00.000437 main     Process ID: 1433
2025-02-25 23:30:45 (75480): Guest Log: 00:00:00.000437 main     Package type: LINUX_64BITS_GENERIC
2025-02-25 23:30:45 (75480): Guest Log: 00:00:00.001318 main     5.2.32 r132073 started. Verbose level = 0
2025-02-25 23:30:45 (75480): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-25 23:30:45 (75480): Guest Log: [INFO] Mounting shared directory
2025-02-25 23:30:46 (75480): Guest Log: [INFO] Checking for init_data.xml
2025-02-25 23:30:51 (75480): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-25 23:30:51 (75480): Guest Log: [INFO] Detected branch: prod
2025-02-25 23:30:51 (75480): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-25 23:30:51 (75480): Guest Log: Copying input files
2025-02-25 23:30:52 (75480): Guest Log: Copied input files into RunAtlas.
2025-02-25 23:30:52 (75480): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-25 23:30:52 (75480): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-25 23:30:52 (75480): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-25 23:30:52 (75480): Guest Log: Further information can be found at the LHC@home message board.
2025-02-25 23:30:55 (75480): Guest Log: 00:00:10.013894 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 234 985 000ns (GuestNow=1 740 555 055 073 353 000 ns GuestLast=1 740 526 243 838 368 000 ns fSetTimeLastLoop=true )
2025-02-25 23:31:03 (75480): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-25 23:31:03 (75480): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-25 23:31:03 (75480): Guest Log: 2.6.3.0 1711 0 32208 143067 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-25 23:31:07 (75480): Guest Log: copied the webapp to /var/www
2025-02-25 23:31:07 (75480): Guest Log: ATHENA_PROC_NUMBER=5
2025-02-25 23:31:07 (75480): Guest Log: ATHENA_CORE_NUMBER=5
2025-02-25 23:31:07 (75480): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-25 23:31:07 (75480): Guest Log:  *** Starting ATLAS job. (PandaID=6531022519 taskID=43401155) ***
2025-02-26 01:11:41 (75480): Status Report: Elapsed Time: '6000.397057'
2025-02-26 01:11:41 (75480): Status Report: CPU Time: '24604.296875'
2025-02-26 01:24:53 (75480): Guest Log:  *** Job finished ***
2025-02-26 01:24:53 (75480): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-26 01:24:53 (75480): Guest Log: 2025-02-26 09:24:41,972 | INFO     | [job] control thread has finished
2025-02-26 01:24:53 (75480): Guest Log: 2025-02-26 09:24:42,335 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-02-26 01:24:53 (75480): Guest Log: 2025-02-26 09:24:46,386 | INFO     | [data] queue_monitor thread has finished
2025-02-26 01:24:53 (75480): Guest Log: 2025-02-26 09:24:46,591 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139713096619840)>', '<ExcThread(monitor, started 139712526280448)>']
2025-02-26 01:24:53 (75480): Guest Log: 2025-02-26 09:24:46,687 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-26 01:24:53 (75480): Guest Log: 2025-02-26 09:24:46,687 | INFO     | [monitor] control thread has ended
2025-02-26 01:24:53 (75480): Guest Log: 2025-02-26 09:24:51,597 | INFO     | all workflow threads have been joined
2025-02-26 01:24:53 (75480): Guest Log: 2025-02-26 09:24:51,597 | INFO     | end of generic workflow (traces error code: 0)
2025-02-26 01:24:53 (75480): Guest Log: 2025-02-26 09:24:51,597 | INFO     | traces error code: 0
2025-02-26 01:24:53 (75480): Guest Log: 2025-02-26 09:24:51,597 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-26 01:24:53 (75480): Guest Log: 2025-02-26 09:24:51,675 [wrapper] ==== pilot stdout END ====
2025-02-26 01:24:53 (75480): Guest Log: 2025-02-26 09:24:51,680 [wrapper] ==== wrapper stdout RESUME ====
2025-02-26 01:24:53 (75480): Guest Log: 2025-02-26 09:24:51,685 [wrapper] pilotpid: 6058
2025-02-26 01:24:53 (75480): Guest Log: 2025-02-26 09:24:51,690 [wrapper] Pilot exit status: 0
2025-02-26 01:24:53 (75480): Guest Log: 2025-02-26 09:24:52,047 [wrapper] pandaids: 6531022519
2025-02-26 01:24:53 (75480): Guest Log: 2025-02-26 09:24:52,078 [wrapper] cleanup supervisor_pilot  5397 6059
2025-02-26 01:24:53 (75480): Guest Log: 2025-02-26 09:24:52,083 [wrapper] Test setup, not cleaning
2025-02-26 01:24:53 (75480): Guest Log: 2025-02-26 09:24:52,092 [wrapper] apfmon messages muted
2025-02-26 01:24:53 (75480): Guest Log: 2025-02-26 09:24:52,097 [wrapper] ==== wrapper stdout END ====
2025-02-26 01:24:53 (75480): Guest Log: 2025-02-26 09:24:52,101 [wrapper] ==== wrapper stderr END ====
2025-02-26 01:24:53 (75480): Guest Log:  *** Error codes and diagnostics ***
2025-02-26 01:24:53 (75480): Guest Log:     "exeErrorCode": 0,
2025-02-26 01:24:53 (75480): Guest Log:     "exeErrorDiag": "",
2025-02-26 01:24:53 (75480): Guest Log:     "pilotErrorCode": 0,
2025-02-26 01:24:53 (75480): Guest Log:     "pilotErrorDiag": "",
2025-02-26 01:24:53 (75480): Guest Log:  *** Listing of results directory ***
2025-02-26 01:24:53 (75480): Guest Log: total 178372
2025-02-26 01:24:53 (75480): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 25 21:07 pilot3.tar.gz
2025-02-26 01:24:53 (75480): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 25 21:48 runpilot2-wrapper.sh
2025-02-26 01:24:53 (75480): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 25 21:48 queuedata.json
2025-02-26 01:24:53 (75480): Guest Log: -rwxr-xr-x. 1 atlas atlas      9395 Feb 26 07:30 init_data.xml
2025-02-26 01:24:53 (75480): Guest Log: -rwxr-xr-x. 1 atlas atlas    503545 Feb 26 07:30 input.tar.gz
2025-02-26 01:24:53 (75480): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 26 07:30 start_atlas.sh
2025-02-26 01:24:53 (75480): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 26 07:30 EVNT.43401153._000012.pool.root.1 -> /data/./ATLAS.root_0
2025-02-26 01:24:53 (75480): Guest Log: -rw-r--r--. 1 atlas atlas      2537 Feb 26 07:31 pandaJob.out
2025-02-26 01:24:53 (75480): Guest Log: -rw-------. 1 atlas atlas       424 Feb 26 07:31 setup.sh.local
2025-02-26 01:24:53 (75480): Guest Log: -rw-------. 1 atlas atlas    986668 Feb 26 07:32 agis_schedconf.cvmfs.json
2025-02-26 01:24:53 (75480): Guest Log: -rw-------. 1 atlas atlas   1569258 Feb 26 07:32 agis_ddmendpoints.agis.ALL.json
2025-02-26 01:24:53 (75480): Guest Log: drwx------. 4 atlas atlas      4096 Feb 26 07:32 pilot3
2025-02-26 01:24:53 (75480): Guest Log: -rw-------. 1 atlas atlas 177232939 Feb 26 09:23 HITS.43401155._000297.pool.root.1
2025-02-26 01:24:53 (75480): Guest Log: -rw-------. 1 atlas atlas      1037 Feb 26 09:24 memory_monitor_summary.json
2025-02-26 01:24:53 (75480): Guest Log: -rw-------. 1 atlas atlas    279528 Feb 26 09:24 log.43401155._000297.job.log.tgz.1
2025-02-26 01:24:53 (75480): Guest Log: -rw-------. 1 atlas atlas      7752 Feb 26 09:24 heartbeat.json
2025-02-26 01:24:53 (75480): Guest Log: -rw-------. 1 atlas atlas        95 Feb 26 09:24 pilot_heartbeat.json
2025-02-26 01:24:53 (75480): Guest Log: -rw-------. 1 atlas atlas      4591 Feb 26 09:24 pilotlog.txt
2025-02-26 01:24:53 (75480): Guest Log: -rw-------. 1 atlas atlas    566861 Feb 26 09:24 log.43401155._000297.job.log.1
2025-02-26 01:24:53 (75480): Guest Log: -rw-------. 1 atlas atlas       357 Feb 26 09:24 output.list
2025-02-26 01:24:53 (75480): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 26 09:24 runtime_log
2025-02-26 01:24:53 (75480): Guest Log: -rw-------. 1 atlas atlas    870400 Feb 26 09:24 result.tar.gz
2025-02-26 01:24:53 (75480): Guest Log: -rw-------. 1 atlas atlas       656 Feb 26 09:24 xCdKDmFyH76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmh9wKDmQ6woIn.diag
2025-02-26 01:24:53 (75480): Guest Log: -rw-r--r--. 1 atlas atlas     10944 Feb 26 09:24 runtime_log.err
2025-02-26 01:24:53 (75480): Guest Log: Looking for outputfile HITS.43401155._000297.pool.root.1
2025-02-26 01:24:53 (75480): Guest Log: HITS file was successfully produced
2025-02-26 01:24:53 (75480): Guest Log: -rw-------. 1 atlas atlas 177232939 Feb 26 09:23 /home/atlas/RunAtlas/HITS.43401155._000297.pool.root.1
2025-02-26 01:24:53 (75480): Guest Log: Successfully finished the ATLAS job!
2025-02-26 01:24:53 (75480): Guest Log: Copying the results back to the shared directory!
2025-02-26 01:24:53 (75480): Guest Log:  *** Contents of shared directory: ***
2025-02-26 01:24:53 (75480): Guest Log: total 416536
2025-02-26 01:24:53 (75480): Guest Log: -rwxrwxrwx. 1 root root 247887949 Feb 26 07:29 ATLAS.root_0
2025-02-26 01:24:53 (75480): Guest Log: -rwxrwxrwx. 1 root root 177232939 Feb 26 09:24 HITS.pool.root.1
2025-02-26 01:24:53 (75480): Guest Log: -rwxrwxrwx. 1 root root      9395 Feb 26 07:29 init_data.xml
2025-02-26 01:24:53 (75480): Guest Log: -rwxrwxrwx. 1 root root    503545 Feb 25 21:54 input.tar.gz
2025-02-26 01:24:53 (75480): Guest Log: -rwxrwxrwx. 1 root root    870400 Feb 26 09:24 result.tar.gz
2025-02-26 01:24:53 (75480): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 25 21:54 start_atlas.sh
2025-02-26 01:24:53 (75480): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-26 01:24:53 (75480): VM Completion File Detected.
2025-02-26 01:24:53 (75480): Powering off VM.
2025-02-26 01:24:54 (75480): Successfully stopped VM.
2025-02-26 01:24:54 (75480): Deregistering VM. (boinc_be0c3d394c350783, slot#5)
2025-02-26 01:24:54 (75480): Removing network bandwidth throttle group from VM.
2025-02-26 01:24:55 (75480): Removing VM from VirtualBox.
01:25:00 (75480): called boinc_finish(0)

</stderr_txt>
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