Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:44:47 (4239): wrapper (7.7.26015): starting
16:44:47 (4239): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 16:44:47] Arguments: --nthreads 12
[2025-02-25 16:44:47] Threads: 12
[2025-02-25 16:44:47] Checking for CVMFS
[2025-02-25 16:44:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 16:44:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 16:44:47] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 16:44:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 16:44:47] 2.11.2.0 25961 309275 151680 143052 0 58 20160393 20275200 1 130560 0 24881277 99.986 7753327 41978 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 16:44:47] CVMFS is ok
[2025-02-25 16:44:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 16:44:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 16:44:47] Further information can be found at the LHC@home message board.
[2025-02-25 16:44:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 16:44:47] Checking for apptainer binary...
[2025-02-25 16:44:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 16:44:47] Running /usr/bin/apptainer --version
[2025-02-25 16:44:47] apptainer version 1.3.2-1.el7
[2025-02-25 16:44:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 16:44:48] c-205-5.aglt2.org
[2025-02-25 16:44:48] apptainer works
[2025-02-25 16:44:48] Set ATHENA_PROC_NUMBER=12
[2025-02-25 16:44:48] Set ATHENA_CORE_NUMBER=12
[2025-02-25 16:44:48] Starting ATLAS job with PandaID=6531002396
[2025-02-25 16:44:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 18:04:41]  *** The last 200 lines of the pilot log: ***
[2025-02-25 18:04:41]  status=None
[2025-02-25 18:04:41]  status_code=0
[2025-02-25 18:04:41]  storage_token=
[2025-02-25 18:04:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6531002396/log.43401171._001637.job.log.tgz.1
[2025-02-25 18:04:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/49/log.43401171._001637.job.log.tgz.1
[2025-02-25 18:04:41]  workdir=None
[2025-02-25 18:04:41] ]
[2025-02-25 18:04:41] 2025-02-25 23:04:15,602 | INFO     | transferring file log.43401171._001637.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6531002396/log.43401171._001637.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 18:04:41] 2025-02-25 23:04:15,602 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6531002396/log.43401171._001637.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401171._001637.job
[2025-02-25 18:04:41] 2025-02-25 23:04:15,622 | INFO     | adding to output.list: log.43401171._001637.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/49/log.43401171._001637.job.log.tg
[2025-02-25 18:04:41] 2025-02-25 23:04:15,623 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 18:04:41] 2025-02-25 23:04:15,623 | INFO     | summary of transferred files:
[2025-02-25 18:04:41] 2025-02-25 23:04:15,623 | INFO     |  -- lfn=log.43401171._001637.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 18:04:41] 2025-02-25 23:04:15,623 | INFO     | stage-out finished correctly
[2025-02-25 18:04:41] 2025-02-25 23:04:16,455 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 18:04:41] 2025-02-25 23:04:16,533 | INFO     | job 6531002396 has state=finished
[2025-02-25 18:04:41] 2025-02-25 23:04:16,533 | INFO     | preparing for final server update for job 6531002396 in state='finished'
[2025-02-25 18:04:41] 2025-02-25 23:04:16,534 | INFO     | this job has now completed (state=finished)
[2025-02-25 18:04:41] 2025-02-25 23:04:16,534 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 18:04:41] 2025-02-25 23:04:16,534 | INFO     | log transfer has been attempted: DONE
[2025-02-25 18:04:41] 2025-02-25 23:04:16,535 | INFO     | job 6531002396 has finished - writing final server update
[2025-02-25 18:04:41] 2025-02-25 23:04:16,535 | INFO     | total number of processed events: 400 (read)
[2025-02-25 18:04:41] 2025-02-25 23:04:16,537 | INFO     | executing command: lscpu
[2025-02-25 18:04:41] 2025-02-25 23:04:16,562 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 18:04:41] 2025-02-25 23:04:16,576 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 18:04:41] 2025-02-25 23:04:21,193 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 18:04:41] 2025-02-25 23:04:21,194 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6531002396/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 18:04:41] 2025-02-25 23:04:21,195 | INFO     | extracted standard info from prmon json
[2025-02-25 18:04:41] 2025-02-25 23:04:21,195 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 18:04:41] 2025-02-25 23:04:21,195 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 18:04:41] 2025-02-25 23:04:21,196 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 18:04:41] 2025-02-25 23:04:21,196 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 18:04:41] 2025-02-25 23:04:21,202 | INFO     | fitting pss+swap vs Time
[2025-02-25 18:04:41] 2025-02-25 23:04:21,203 | INFO     | model: linear, x: [1740520236.0, 1740520297.0, 1740520358.0, 1740520419.0, 1740520480.0, 1740520541.0, 1740520602.0, 1740520663.0, 1740520724.0, 1740520785.0, 1740
[2025-02-25 18:04:41] 2025-02-25 23:04:21,203 | INFO     | sum of square deviations: 110960220.0
[2025-02-25 18:04:41] 2025-02-25 23:04:21,203 | INFO     | sum of deviations: 18703403675.0
[2025-02-25 18:04:41] 2025-02-25 23:04:21,203 | INFO     | mean x: 1740522371.0
[2025-02-25 18:04:41] 2025-02-25 23:04:21,204 | INFO     | mean y: 2584553.915492958
[2025-02-25 18:04:41] 2025-02-25 23:04:21,204 | INFO     | -- intersect: -293379066187.0538
[2025-02-25 18:04:41] 2025-02-25 23:04:21,204 | INFO     | intersect: -293379066187.0538
[2025-02-25 18:04:41] 2025-02-25 23:04:21,204 | INFO     | chi2: 2.182243608211467
[2025-02-25 18:04:41] 2025-02-25 23:04:21,204 | INFO     | -- intersect: -293379066187.0538
[2025-02-25 18:04:41] 2025-02-25 23:04:21,205 | INFO     | current memory leak: 168.56 B/s (using 71 data points, chi2=2.18)
[2025-02-25 18:04:41] 2025-02-25 23:04:21,205 | INFO     | ..............................
[2025-02-25 18:04:41] 2025-02-25 23:04:21,205 | INFO     | . Timing measurements:
[2025-02-25 18:04:41] 2025-02-25 23:04:21,205 | INFO     | . get job = 0 s
[2025-02-25 18:04:41] 2025-02-25 23:04:21,205 | INFO     | . initial setup = 2 s
[2025-02-25 18:04:41] 2025-02-25 23:04:21,206 | INFO     | . payload setup = 7 s
[2025-02-25 18:04:41] 2025-02-25 23:04:21,206 | INFO     | . stage-in = 0 s
[2025-02-25 18:04:41] 2025-02-25 23:04:21,206 | INFO     | . payload execution = 4725 s
[2025-02-25 18:04:41] 2025-02-25 23:04:21,206 | INFO     | . stage-out = 0 s
[2025-02-25 18:04:41] 2025-02-25 23:04:21,206 | INFO     | . log creation = 0 s
[2025-02-25 18:04:41] 2025-02-25 23:04:21,206 | INFO     | ..............................
[2025-02-25 18:04:41] 2025-02-25 23:04:21,270 | WARNING  | process 14353 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 18:04:41] 2025-02-25 23:04:21,276 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6531002396/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 18:04:41] 2025-02-25 23:04:21,294 | INFO     | 
[2025-02-25 18:04:41] 2025-02-25 23:04:21,294 | INFO     | job summary report
[2025-02-25 18:04:41] 2025-02-25 23:04:21,294 | INFO     | --------------------------------------------------
[2025-02-25 18:04:41] 2025-02-25 23:04:21,295 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6531002396/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 18:04:41] 2025-02-25 23:04:21,296 | INFO     | PanDA job id: 6531002396
[2025-02-25 18:04:41] 2025-02-25 23:04:21,296 | INFO     | task id: 43401171
[2025-02-25 18:04:41] 2025-02-25 23:04:21,296 | INFO     | errors: (none)
[2025-02-25 18:04:41] 2025-02-25 23:04:21,296 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 18:04:41] 2025-02-25 23:04:21,296 | INFO     | pilot state: finished 
[2025-02-25 18:04:41] 2025-02-25 23:04:21,297 | INFO     | transexitcode: 0
[2025-02-25 18:04:41] 2025-02-25 23:04:21,297 | INFO     | exeerrorcode: 0
[2025-02-25 18:04:41] 2025-02-25 23:04:21,297 | INFO     | exeerrordiag: 
[2025-02-25 18:04:41] 2025-02-25 23:04:21,298 | INFO     | exitcode: 0
[2025-02-25 18:04:41] 2025-02-25 23:04:21,298 | INFO     | exitmsg: OK
[2025-02-25 18:04:41] 2025-02-25 23:04:21,298 | INFO     | cpuconsumptiontime: 44949 s
[2025-02-25 18:04:41] 2025-02-25 23:04:21,299 | INFO     | nevents: 400
[2025-02-25 18:04:41] 2025-02-25 23:04:21,299 | INFO     | neventsw: 0
[2025-02-25 18:04:41] 2025-02-25 23:04:21,299 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4515942 B
[2025-02-25 18:04:41] 2025-02-25 23:04:21,299 | INFO     | pid: 14353
[2025-02-25 18:04:41] 2025-02-25 23:04:21,300 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15540 B
[2025-02-25 18:04:41] 2025-02-25 23:04:21,300 | INFO     | pgrp: 14353
[2025-02-25 18:04:41] 2025-02-25 23:04:21,300 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 18:04:41] 2025-02-25 23:04:21,300 | INFO     | corecount: 12
[2025-02-25 18:04:41] 2025-02-25 23:04:21,301 | INFO     | event service: False
[2025-02-25 18:04:41] 2025-02-25 23:04:21,301 | INFO     | sizes: {0: 2370214, 1: 2370413, 6: 2370619, 12: 2370647, 4737: 2396645, 4738: 2405586, 4739: 2405770, 4743: 2405940}
[2025-02-25 18:04:41] 2025-02-25 23:04:21,301 | INFO     | --------------------------------------------------
[2025-02-25 18:04:41] 2025-02-25 23:04:21,301 | INFO     | 
[2025-02-25 18:04:41] 2025-02-25 23:04:21,301 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 18:04:41] 2025-02-25 23:04:21,320 | INFO     | sufficient remaining disk space (29367468032 B)
[2025-02-25 18:04:41] 2025-02-25 23:04:21,320 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-02-25 18:04:41] 2025-02-25 23:04:21,321 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6531002396: 4814844 B (within 2537553920 B limit)
[2025-02-25 18:04:41] 2025-02-25 23:04:21,321 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6531002396/HITS.43401171._001637.pool.root.1 does not exist (skip from workdir size calculation)
[2025-02-25 18:04:41] 2025-02-25 23:04:21,321 | INFO     | total size of present files: 0 B (workdir size: 4814844 B)
[2025-02-25 18:04:41] 2025-02-25 23:04:21,322 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6531002396/HITS.43401171._001637.pool.root.1 since it does not exist
[2025-02-25 18:04:41] 2025-02-25 23:04:21,332 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 18:04:41] 2025-02-25 23:04:21,332 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 18:04:41] 2025-02-25 23:04:21,332 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 18:04:41] 2025-02-25 23:04:21,332 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 18:04:41] 2025-02-25 23:04:21,332 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 18:04:41] 2025-02-25 23:04:21,333 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 18:04:41] 2025-02-25 23:04:21,333 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 18:04:41] 2025-02-25 23:04:21,333 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 18:04:41] 2025-02-25 23:04:21,333 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 18:04:41] 2025-02-25 23:04:21,333 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 18:04:41] 2025-02-25 23:04:21,334 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 18:04:41] 2025-02-25 23:04:21,334 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 18:04:41] 2025-02-25 23:04:21,334 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 18:04:41] 2025-02-25 23:04:21,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 18:04:41] 2025-02-25 23:04:21,334 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 18:04:41] 2025-02-25 23:04:21,334 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 18:04:41] 2025-02-25 23:04:21,335 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 18:04:41] 2025-02-25 23:04:21,335 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 18:04:41] 2025-02-25 23:04:21,335 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 18:04:41] 2025-02-25 23:04:21,335 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 18:04:41] 2025-02-25 23:04:21,335 | INFO     | job 6531002396 has completed (purged errors)
[2025-02-25 18:04:41] 2025-02-25 23:04:21,336 | INFO     | overall cleanup function is called
[2025-02-25 18:04:41] 2025-02-25 23:04:21,387 | INFO     | number of running child processes to parent process 14353: 1
[2025-02-25 18:04:41] 2025-02-25 23:04:21,387 | INFO     | maximum number of monitored processes: 6
[2025-02-25 18:04:41] 2025-02-25 23:04:21,387 | INFO     | aborting job monitoring since job object (job id=6531002396) has expired
[2025-02-25 18:04:41] 2025-02-25 23:04:22,341 | INFO     | --- collectZombieJob: --- 10, [14353]
[2025-02-25 18:04:41] 2025-02-25 23:04:22,341 | INFO     | zombie collector waiting for pid 14353
[2025-02-25 18:04:41] 2025-02-25 23:04:22,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 18:04:41] 2025-02-25 23:04:22,341 | INFO     | collected zombie processes
[2025-02-25 18:04:41] 2025-02-25 23:04:22,341 | INFO     | will attempt to kill all subprocesses of pid=14353
[2025-02-25 18:04:41] 2025-02-25 23:04:22,401 | INFO     | process IDs to be killed: [14353] (in reverse order)
[2025-02-25 18:04:41] 2025-02-25 23:04:22,452 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 18:04:41] 2025-02-25 23:04:22,452 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 18:04:41] 2025-02-25 23:04:22,456 | INFO     | did not find any defunct processes belonging to 14353
[2025-02-25 18:04:41] 2025-02-25 23:04:22,459 | INFO     | did not find any defunct processes belonging to 14353
[2025-02-25 18:04:41] 2025-02-25 23:04:22,459 | INFO     | ready for new job
[2025-02-25 18:04:41] 2025-02-25 23:04:22,460 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 18:04:41] 2025-02-25 23:04:22,461 | INFO     | **************************************
[2025-02-25 18:04:41] 2025-02-25 23:04:22,461 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 18:04:41] 2025-02-25 23:04:22,461 | INFO     | **************************************
[2025-02-25 18:04:41] 2025-02-25 23:04:22,461 | INFO     | 
[2025-02-25 18:04:41] 2025-02-25 23:04:22,462 | INFO     | architecture information:
[2025-02-25 18:04:41] 2025-02-25 23:04:22,462 | INFO     | executing command: cat /etc/os-release
[2025-02-25 18:04:41] 2025-02-25 23:04:22,476 | INFO     | cat /etc/os-release:
[2025-02-25 18:04:41] NAME="CentOS Linux"
[2025-02-25 18:04:41] VERSION="7 (Core)"
[2025-02-25 18:04:41] ID="centos"
[2025-02-25 18:04:41] ID_LIKE="rhel fedora"
[2025-02-25 18:04:41] VERSION_ID="7"
[2025-02-25 18:04:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 18:04:41] ANSI_COLOR="0;31"
[2025-02-25 18:04:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 18:04:41] HOME_URL="https://www.centos.org/"
[2025-02-25 18:04:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 18:04:41] 
[2025-02-25 18:04:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 18:04:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 18:04:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 18:04:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 18:04:41] 
[2025-02-25 18:04:41] 2025-02-25 23:04:22,477 | INFO     | **************************************
[2025-02-25 18:04:41] 2025-02-25 23:04:22,980 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 18:04:41] 2025-02-25 23:04:22,995 | INFO     | sufficient remaining disk space (29372710912 B)
[2025-02-25 18:04:41] 2025-02-25 23:04:22,996 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 18:04:41] 2025-02-25 23:04:22,996 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 18:04:41] 2025-02-25 23:04:22,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 18:04:41] 2025-02-25 23:04:22,997 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 18:04:41] 2025-02-25 23:04:22,997 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 18:04:41] 2025-02-25 23:04:22,997 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 18:04:41] 2025-02-25 23:04:22,997 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 18:04:41] 2025-02-25 23:04:22,998 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 18:04:41] 2025-02-25 23:04:22,998 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 18:04:41] 2025-02-25 23:04:22,998 | INFO     | aborting loop
[2025-02-25 18:04:41] 2025-02-25 23:04:23,068 | INFO     | all job control threads have been joined
[2025-02-25 18:04:41] 2025-02-25 23:04:23,284 | INFO     | all data control threads have been joined
[2025-02-25 18:04:41] 2025-02-25 23:04:23,724 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 18:04:41] 2025-02-25 23:04:24,001 | INFO     | [job] retrieve thread has finished
[2025-02-25 18:04:41] 2025-02-25 23:04:24,002 | INFO     | [job] queue monitor thread has finished
[2025-02-25 18:04:41] 2025-02-25 23:04:24,004 | INFO     | [job] job monitor thread has finished
[2025-02-25 18:04:41] 2025-02-25 23:04:24,073 | INFO     | [job] control thread has finished
[2025-02-25 18:04:41] 2025-02-25 23:04:24,187 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 18:04:41] 2025-02-25 23:04:24,209 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 18:04:41] 2025-02-25 23:04:24,290 | INFO     | [data] control thread has finished
[2025-02-25 18:04:41] 2025-02-25 23:04:24,480 | INFO     | all payload control threads have been joined
[2025-02-25 18:04:41] 2025-02-25 23:04:24,571 | INFO     | [payload] failed_post thread has finished
[2025-02-25 18:04:41] 2025-02-25 23:04:24,749 | INFO     | [data] copytool_in thread has finished
[2025-02-25 18:04:41] 2025-02-25 23:04:24,803 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 18:04:41] 2025-02-25 23:04:25,439 | INFO     | [job] validate thread has finished
[2025-02-25 18:04:41] 2025-02-25 23:04:25,467 | INFO     | [payload] validate_post thread has finished
[2025-02-25 18:04:41] 2025-02-25 23:04:25,485 | INFO     | [payload] control thread has finished
[2025-02-25 18:04:41] 2025-02-25 23:04:25,729 | INFO     | [data] copytool_out thread has finished
[2025-02-25 18:04:41] 2025-02-25 23:04:27,004 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 18:04:41] 2025-02-25 23:04:33,804 | INFO     | job.realtimelogging is not enabled
[2025-02-25 18:04:41] 2025-02-25 23:04:34,809 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 18:04:41] 2025-02-25 23:04:36,086 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139855271503680)>', '<ExcThread(monitor, started 139854964827904)>']
[2025-02-25 18:04:41] 2025-02-25 23:04:37,065 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 18:04:41] 2025-02-25 23:04:37,065 | INFO     | [monitor] control thread has ended
[2025-02-25 18:04:41] 2025-02-25 23:04:41,111 | INFO     | all workflow threads have been joined
[2025-02-25 18:04:41] 2025-02-25 23:04:41,114 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 18:04:41] 2025-02-25 23:04:41,115 | INFO     | traces error code: 0
[2025-02-25 18:04:41] 2025-02-25 23:04:41,116 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 18:04:41] 2025-02-25 23:04:41,213 [wrapper] ==== pilot stdout END ====
[2025-02-25 18:04:41] 2025-02-25 23:04:41,217 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 18:04:41] 2025-02-25 23:04:41,221 [wrapper] pilotpid: 7842
[2025-02-25 18:04:41] 2025-02-25 23:04:41,225 [wrapper] Pilot exit status: 0
[2025-02-25 18:04:41] 2025-02-25 23:04:41,241 [wrapper] pandaids: 6531002396
[2025-02-25 18:04:41] 2025-02-25 23:04:41,279 [wrapper] cleanup supervisor_pilot  6148 7843
[2025-02-25 18:04:41] 2025-02-25 23:04:41,283 [wrapper] Test setup, not cleaning
[2025-02-25 18:04:41] 2025-02-25 23:04:41,291 [wrapper] apfmon messages muted
[2025-02-25 18:04:41] 2025-02-25 23:04:41,295 [wrapper] ==== wrapper stdout END ====
[2025-02-25 18:04:41] 2025-02-25 23:04:41,298 [wrapper] ==== wrapper stderr END ====
[2025-02-25 18:04:41]  *** Error codes and diagnostics ***
[2025-02-25 18:04:41]     "exeErrorCode": 0,
[2025-02-25 18:04:41]     "exeErrorDiag": "",
[2025-02-25 18:04:41]     "pilotErrorCode": 0,
[2025-02-25 18:04:41]     "pilotErrorDiag": "",
[2025-02-25 18:04:41]  *** Listing of results directory ***
[2025-02-25 18:04:41] total 423380
[2025-02-25 18:04:41] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 16:07 pilot3.tar.gz
[2025-02-25 18:04:41] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 16:38 queuedata.json
[2025-02-25 18:04:41] -rwx------ 1 boincer umatlas     35865 Feb 25 16:38 runpilot2-wrapper.sh
[2025-02-25 18:04:41] -rw-r--r-- 1 boincer umatlas       100 Feb 25 16:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 18:04:41] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 16:44 run_atlas
[2025-02-25 18:04:41] -rw-r--r-- 1 boincer umatlas       105 Feb 25 16:44 job.xml
[2025-02-25 18:04:41] -rw-r--r-- 2 boincer umatlas 250714507 Feb 25 16:44 EVNT.43401169._000065.pool.root.1
[2025-02-25 18:04:41] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 16:44 start_atlas.sh
[2025-02-25 18:04:41] drwxrwx--x 2 boincer umatlas      4096 Feb 25 16:44 shared
[2025-02-25 18:04:41] -rw-r--r-- 2 boincer umatlas    503555 Feb 25 16:44 input.tar.gz
[2025-02-25 18:04:41] -rw-r--r-- 1 boincer umatlas         0 Feb 25 16:44 boinc_lockfile
[2025-02-25 18:04:41] -rw-r--r-- 1 boincer umatlas      2543 Feb 25 16:44 pandaJob.out
[2025-02-25 18:04:41] -rw------- 1 boincer umatlas       424 Feb 25 16:44 setup.sh.local
[2025-02-25 18:04:41] -rw------- 1 boincer umatlas    987482 Feb 25 16:44 agis_schedconf.cvmfs.json
[2025-02-25 18:04:41] -rw------- 1 boincer umatlas   1573632 Feb 25 16:45 agis_ddmendpoints.agis.ALL.json
[2025-02-25 18:04:41] drwx------ 4 boincer umatlas      4096 Feb 25 16:45 pilot3
[2025-02-25 18:04:41] -rw-r--r-- 1 boincer umatlas      5866 Feb 25 18:02 init_data.xml
[2025-02-25 18:04:41] -rw------- 1 boincer umatlas 177387781 Feb 25 18:03 HITS.43401171._001637.pool.root.1
[2025-02-25 18:04:41] -rw-r--r-- 1 boincer umatlas       530 Feb 25 18:03 boinc_task_state.xml
[2025-02-25 18:04:41] -rw------- 1 boincer umatlas        95 Feb 25 18:04 pilot_heartbeat.json
[2025-02-25 18:04:41] -rw------- 1 boincer umatlas      1045 Feb 25 18:04 memory_monitor_summary.json
[2025-02-25 18:04:41] -rw------- 1 boincer umatlas    373403 Feb 25 18:04 log.43401171._001637.job.log.tgz.1
[2025-02-25 18:04:41] -rw------- 1 boincer umatlas      7762 Feb 25 18:04 heartbeat.json
[2025-02-25 18:04:41] -rw-r--r-- 1 boincer umatlas        27 Feb 25 18:04 wrapper_checkpoint.txt
[2025-02-25 18:04:41] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 18:04 boinc_mmap_file
[2025-02-25 18:04:41] -rw------- 1 boincer umatlas      4410 Feb 25 18:04 pilotlog.txt
[2025-02-25 18:04:41] -rw------- 1 boincer umatlas    449835 Feb 25 18:04 log.43401171._001637.job.log.1
[2025-02-25 18:04:41] -rw------- 1 boincer umatlas       357 Feb 25 18:04 output.list
[2025-02-25 18:04:41] -rw-r--r-- 1 boincer umatlas       620 Feb 25 18:04 runtime_log
[2025-02-25 18:04:41] -rw------- 1 boincer umatlas    839680 Feb 25 18:04 result.tar.gz
[2025-02-25 18:04:41] -rw-r--r-- 1 boincer umatlas     11010 Feb 25 18:04 runtime_log.err
[2025-02-25 18:04:41] -rw------- 1 boincer umatlas       657 Feb 25 18:04 OmRLDmToH76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmXHgKDmX0pHBo.diag
[2025-02-25 18:04:41] -rw-r--r-- 1 boincer umatlas     22341 Feb 25 18:04 stderr.txt
[2025-02-25 18:04:41] HITS file was successfully produced:
[2025-02-25 18:04:41] -rw------- 1 boincer umatlas 177387781 Feb 25 18:03 shared/HITS.pool.root.1
[2025-02-25 18:04:41]  *** Contents of shared directory: ***
[2025-02-25 18:04:41] total 419408
[2025-02-25 18:04:41] -rw-r--r-- 2 boincer umatlas 250714507 Feb 25 16:44 ATLAS.root_0
[2025-02-25 18:04:41] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 16:44 start_atlas.sh
[2025-02-25 18:04:41] -rw-r--r-- 2 boincer umatlas    503555 Feb 25 16:44 input.tar.gz
[2025-02-25 18:04:41] -rw------- 1 boincer umatlas 177387781 Feb 25 18:03 HITS.pool.root.1
[2025-02-25 18:04:41] -rw------- 1 boincer umatlas    839680 Feb 25 18:04 result.tar.gz
18:04:43 (4239): run_atlas exited; CPU time 44885.202269
18:04:43 (4239): called boinc_finish(0)

</stderr_txt>
]]>

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