Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:49:09 (22805): wrapper (7.7.26015): starting
16:49:09 (22805): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 16:49:09] Arguments: --nthreads 12
[2025-02-25 16:49:09] Threads: 12
[2025-02-25 16:49:09] Checking for CVMFS
[2025-02-25 16:49:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 16:49:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 16:49:10] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 16:49:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 16:49:10] 2.11.2.0 10568 201526 148012 143052 2 58 16821786 20275200 1 130560 0 23891573 99.958 8241852 41120 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 16:49:10] CVMFS is ok
[2025-02-25 16:49:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 16:49:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 16:49:10] Further information can be found at the LHC@home message board.
[2025-02-25 16:49:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 16:49:10] Checking for apptainer binary...
[2025-02-25 16:49:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 16:49:10] Running /usr/bin/apptainer --version
[2025-02-25 16:49:10] apptainer version 1.3.2-1.el7
[2025-02-25 16:49:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 16:49:12] c-205-24.aglt2.org
[2025-02-25 16:49:12] apptainer works
[2025-02-25 16:49:12] Set ATHENA_PROC_NUMBER=12
[2025-02-25 16:49:12] Set ATHENA_CORE_NUMBER=12
[2025-02-25 16:49:12] Starting ATLAS job with PandaID=6531001472
[2025-02-25 16:49:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 18:13:36]  *** The last 200 lines of the pilot log: ***
[2025-02-25 18:13:36]  mtime=0
[2025-02-25 18:13:36]  protocol_id=None
[2025-02-25 18:13:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 18:13:36]  replicas=None
[2025-02-25 18:13:36]  scope=mc23_13p6TeV
[2025-02-25 18:13:36]  status=None
[2025-02-25 18:13:36]  status_code=0
[2025-02-25 18:13:36]  storage_token=
[2025-02-25 18:13:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6531001472/log.43401171._001498.job.log.tgz.1
[2025-02-25 18:13:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/23/log.43401171._001498.job.log.tgz.1
[2025-02-25 18:13:36]  workdir=None
[2025-02-25 18:13:36] ]
[2025-02-25 18:13:36] 2025-02-25 23:13:08,335 | INFO     | transferring file log.43401171._001498.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6531001472/log.43401171._001498.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 18:13:36] 2025-02-25 23:13:08,335 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6531001472/log.43401171._001498.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401171._001498.job
[2025-02-25 18:13:36] 2025-02-25 23:13:08,358 | INFO     | adding to output.list: log.43401171._001498.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/23/log.43401171._001498.job.log.tg
[2025-02-25 18:13:36] 2025-02-25 23:13:08,359 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 18:13:36] 2025-02-25 23:13:08,359 | INFO     | summary of transferred files:
[2025-02-25 18:13:36] 2025-02-25 23:13:08,359 | INFO     |  -- lfn=log.43401171._001498.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 18:13:36] 2025-02-25 23:13:08,359 | INFO     | stage-out finished correctly
[2025-02-25 18:13:36] 2025-02-25 23:13:09,636 | WARNING  | process 677 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 18:13:36] 2025-02-25 23:13:09,637 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6531001472/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 18:13:36] 2025-02-25 23:13:09,699 | INFO     | number of running child processes to parent process 677: 1
[2025-02-25 18:13:36] 2025-02-25 23:13:09,700 | INFO     | maximum number of monitored processes: 6
[2025-02-25 18:13:36] 2025-02-25 23:13:11,158 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 18:13:36] 2025-02-25 23:13:12,203 | INFO     | monitor loop #372: job 0:6531001472 is in state 'finished'
[2025-02-25 18:13:36] 2025-02-25 23:13:12,203 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 18:13:36] 2025-02-25 23:13:13,144 | INFO     | job 6531001472 has state=finished
[2025-02-25 18:13:36] 2025-02-25 23:13:13,144 | INFO     | preparing for final server update for job 6531001472 in state='finished'
[2025-02-25 18:13:36] 2025-02-25 23:13:13,153 | INFO     | this job has now completed (state=finished)
[2025-02-25 18:13:36] 2025-02-25 23:13:13,153 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 18:13:36] 2025-02-25 23:13:13,154 | INFO     | log transfer has been attempted: DONE
[2025-02-25 18:13:36] 2025-02-25 23:13:13,154 | INFO     | job 6531001472 has finished - writing final server update
[2025-02-25 18:13:36] 2025-02-25 23:13:13,154 | INFO     | total number of processed events: 400 (read)
[2025-02-25 18:13:36] 2025-02-25 23:13:13,155 | INFO     | executing command: lscpu
[2025-02-25 18:13:36] 2025-02-25 23:13:13,181 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 18:13:36] 2025-02-25 23:13:13,197 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 18:13:36] 2025-02-25 23:13:14,707 | INFO     | monitor loop #373: job 0:6531001472 is in state 'finished'
[2025-02-25 18:13:36] 2025-02-25 23:13:14,707 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 18:13:36] 2025-02-25 23:13:17,209 | INFO     | monitor loop #374: job 0:6531001472 is in state 'finished'
[2025-02-25 18:13:36] 2025-02-25 23:13:17,210 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 18:13:36] 2025-02-25 23:13:18,149 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 18:13:36] 2025-02-25 23:13:18,153 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6531001472/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 18:13:36] 2025-02-25 23:13:18,154 | INFO     | extracted standard info from prmon json
[2025-02-25 18:13:36] 2025-02-25 23:13:18,154 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 18:13:36] 2025-02-25 23:13:18,154 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 18:13:36] 2025-02-25 23:13:18,154 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 18:13:36] 2025-02-25 23:13:18,155 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 18:13:36] 2025-02-25 23:13:18,156 | INFO     | fitting pss+swap vs Time
[2025-02-25 18:13:36] 2025-02-25 23:13:18,157 | INFO     | model: linear, x: [1740520501.0, 1740520562.0, 1740520623.0, 1740520684.0, 1740520745.0, 1740520806.0, 1740520867.0, 1740520928.0, 1740520989.0, 1740521050.0, 1740
[2025-02-25 18:13:36] 2025-02-25 23:13:18,157 | INFO     | sum of square deviations: 130793150.0
[2025-02-25 18:13:36] 2025-02-25 23:13:18,157 | INFO     | sum of deviations: 21298920734.99999
[2025-02-25 18:13:36] 2025-02-25 23:13:18,157 | INFO     | mean x: 1740522758.0
[2025-02-25 18:13:36] 2025-02-25 23:13:18,157 | INFO     | mean y: 2578557.8533333335
[2025-02-25 18:13:36] 2025-02-25 23:13:18,157 | INFO     | -- intersect: -283431655269.4195
[2025-02-25 18:13:36] 2025-02-25 23:13:18,158 | INFO     | intersect: -283431655269.4195
[2025-02-25 18:13:36] 2025-02-25 23:13:18,158 | INFO     | chi2: 2.0757742046685506
[2025-02-25 18:13:36] 2025-02-25 23:13:18,158 | INFO     | -- intersect: -283431655269.4195
[2025-02-25 18:13:36] 2025-02-25 23:13:18,158 | INFO     | current memory leak: 162.84 B/s (using 75 data points, chi2=2.08)
[2025-02-25 18:13:36] 2025-02-25 23:13:18,158 | INFO     | ..............................
[2025-02-25 18:13:36] 2025-02-25 23:13:18,159 | INFO     | . Timing measurements:
[2025-02-25 18:13:36] 2025-02-25 23:13:18,159 | INFO     | . get job = 0 s
[2025-02-25 18:13:36] 2025-02-25 23:13:18,159 | INFO     | . initial setup = 2 s
[2025-02-25 18:13:36] 2025-02-25 23:13:18,159 | INFO     | . payload setup = 7 s
[2025-02-25 18:13:36] 2025-02-25 23:13:18,159 | INFO     | . stage-in = 0 s
[2025-02-25 18:13:36] 2025-02-25 23:13:18,159 | INFO     | . payload execution = 4993 s
[2025-02-25 18:13:36] 2025-02-25 23:13:18,159 | INFO     | . stage-out = 0 s
[2025-02-25 18:13:36] 2025-02-25 23:13:18,159 | INFO     | . log creation = 0 s
[2025-02-25 18:13:36] 2025-02-25 23:13:18,159 | INFO     | ..............................
[2025-02-25 18:13:36] 2025-02-25 23:13:18,245 | INFO     | 
[2025-02-25 18:13:36] 2025-02-25 23:13:18,246 | INFO     | job summary report
[2025-02-25 18:13:36] 2025-02-25 23:13:18,246 | INFO     | --------------------------------------------------
[2025-02-25 18:13:36] 2025-02-25 23:13:18,246 | INFO     | PanDA job id: 6531001472
[2025-02-25 18:13:36] 2025-02-25 23:13:18,246 | INFO     | task id: 43401171
[2025-02-25 18:13:36] 2025-02-25 23:13:18,246 | INFO     | errors: (none)
[2025-02-25 18:13:36] 2025-02-25 23:13:18,246 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 18:13:36] 2025-02-25 23:13:18,246 | INFO     | pilot state: finished 
[2025-02-25 18:13:36] 2025-02-25 23:13:18,246 | INFO     | transexitcode: 0
[2025-02-25 18:13:36] 2025-02-25 23:13:18,246 | INFO     | exeerrorcode: 0
[2025-02-25 18:13:36] 2025-02-25 23:13:18,247 | INFO     | exeerrordiag: 
[2025-02-25 18:13:36] 2025-02-25 23:13:18,247 | INFO     | exitcode: 0
[2025-02-25 18:13:36] 2025-02-25 23:13:18,247 | INFO     | exitmsg: OK
[2025-02-25 18:13:36] 2025-02-25 23:13:18,247 | INFO     | cpuconsumptiontime: 47606 s
[2025-02-25 18:13:36] 2025-02-25 23:13:18,247 | INFO     | nevents: 400
[2025-02-25 18:13:36] 2025-02-25 23:13:18,247 | INFO     | neventsw: 0
[2025-02-25 18:13:36] 2025-02-25 23:13:18,247 | INFO     | pid: 677
[2025-02-25 18:13:36] 2025-02-25 23:13:18,247 | INFO     | pgrp: 677
[2025-02-25 18:13:36] 2025-02-25 23:13:18,247 | INFO     | corecount: 12
[2025-02-25 18:13:36] 2025-02-25 23:13:18,248 | INFO     | event service: False
[2025-02-25 18:13:36] 2025-02-25 23:13:18,248 | INFO     | sizes: {0: 2370385, 5: 2370591, 11: 2370647, 5005: 2396756, 5006: 2405697, 5008: 2405753, 5015: 2406051}
[2025-02-25 18:13:36] 2025-02-25 23:13:18,248 | INFO     | --------------------------------------------------
[2025-02-25 18:13:36] 2025-02-25 23:13:18,248 | INFO     | 
[2025-02-25 18:13:36] 2025-02-25 23:13:18,248 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 18:13:36] 2025-02-25 23:13:18,273 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 18:13:36] 2025-02-25 23:13:18,273 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 18:13:36] 2025-02-25 23:13:18,273 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 18:13:36] 2025-02-25 23:13:18,273 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 18:13:36] 2025-02-25 23:13:18,273 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 18:13:36] 2025-02-25 23:13:18,274 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 18:13:36] 2025-02-25 23:13:18,274 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 18:13:36] 2025-02-25 23:13:18,274 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 18:13:36] 2025-02-25 23:13:18,274 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 18:13:36] 2025-02-25 23:13:18,274 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 18:13:36] 2025-02-25 23:13:18,274 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 18:13:36] 2025-02-25 23:13:18,274 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 18:13:36] 2025-02-25 23:13:18,274 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 18:13:36] 2025-02-25 23:13:18,275 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 18:13:36] 2025-02-25 23:13:18,275 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 18:13:36] 2025-02-25 23:13:18,275 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 18:13:36] 2025-02-25 23:13:18,275 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 18:13:36] 2025-02-25 23:13:18,275 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 18:13:36] 2025-02-25 23:13:18,275 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 18:13:36] 2025-02-25 23:13:18,275 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 18:13:36] 2025-02-25 23:13:18,275 | INFO     | job 6531001472 has completed (purged errors)
[2025-02-25 18:13:36] 2025-02-25 23:13:18,276 | INFO     | overall cleanup function is called
[2025-02-25 18:13:36] 2025-02-25 23:13:19,281 | INFO     | --- collectZombieJob: --- 10, [677]
[2025-02-25 18:13:36] 2025-02-25 23:13:19,282 | INFO     | zombie collector waiting for pid 677
[2025-02-25 18:13:36] 2025-02-25 23:13:19,282 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 18:13:36] 2025-02-25 23:13:19,282 | INFO     | collected zombie processes
[2025-02-25 18:13:36] 2025-02-25 23:13:19,282 | INFO     | will attempt to kill all subprocesses of pid=677
[2025-02-25 18:13:36] 2025-02-25 23:13:19,347 | INFO     | process IDs to be killed: [677] (in reverse order)
[2025-02-25 18:13:36] 2025-02-25 23:13:19,399 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 18:13:36] 2025-02-25 23:13:19,400 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 18:13:36] 2025-02-25 23:13:19,402 | INFO     | did not find any defunct processes belonging to 677
[2025-02-25 18:13:36] 2025-02-25 23:13:19,404 | INFO     | did not find any defunct processes belonging to 677
[2025-02-25 18:13:36] 2025-02-25 23:13:19,404 | INFO     | ready for new job
[2025-02-25 18:13:36] 2025-02-25 23:13:19,404 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 18:13:36] 2025-02-25 23:13:19,406 | INFO     | **************************************
[2025-02-25 18:13:36] 2025-02-25 23:13:19,406 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 18:13:36] 2025-02-25 23:13:19,406 | INFO     | **************************************
[2025-02-25 18:13:36] 2025-02-25 23:13:19,406 | INFO     | 
[2025-02-25 18:13:36] 2025-02-25 23:13:19,407 | INFO     | architecture information:
[2025-02-25 18:13:36] 2025-02-25 23:13:19,407 | INFO     | executing command: cat /etc/os-release
[2025-02-25 18:13:36] 2025-02-25 23:13:19,423 | INFO     | cat /etc/os-release:
[2025-02-25 18:13:36] NAME="CentOS Linux"
[2025-02-25 18:13:36] VERSION="7 (Core)"
[2025-02-25 18:13:36] ID="centos"
[2025-02-25 18:13:36] ID_LIKE="rhel fedora"
[2025-02-25 18:13:36] VERSION_ID="7"
[2025-02-25 18:13:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 18:13:36] ANSI_COLOR="0;31"
[2025-02-25 18:13:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 18:13:36] HOME_URL="https://www.centos.org/"
[2025-02-25 18:13:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 18:13:36] 
[2025-02-25 18:13:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 18:13:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 18:13:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 18:13:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 18:13:36] 
[2025-02-25 18:13:36] 2025-02-25 23:13:19,423 | INFO     | **************************************
[2025-02-25 18:13:36] 2025-02-25 23:13:19,926 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 18:13:36] 2025-02-25 23:13:19,946 | INFO     | sufficient remaining disk space (29365370880 B)
[2025-02-25 18:13:36] 2025-02-25 23:13:19,946 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 18:13:36] 2025-02-25 23:13:19,946 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 18:13:36] 2025-02-25 23:13:19,947 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 18:13:36] 2025-02-25 23:13:19,947 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 18:13:36] 2025-02-25 23:13:20,184 | INFO     | all job control threads have been joined
[2025-02-25 18:13:36] 2025-02-25 23:13:20,293 | INFO     | all data control threads have been joined
[2025-02-25 18:13:36] 2025-02-25 23:13:20,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 18:13:36] 2025-02-25 23:13:20,723 | INFO     | aborting loop
[2025-02-25 18:13:36] 2025-02-25 23:13:20,741 | INFO     | PID=26775 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-25 18:13:36] 2025-02-25 23:13:20,741 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 18:13:36] 2025-02-25 23:13:20,741 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 18:13:36] 2025-02-25 23:13:20,741 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 18:13:36] 2025-02-25 23:13:20,947 | INFO     | [job] queue monitor thread has finished
[2025-02-25 18:13:36] 2025-02-25 23:13:20,952 | INFO     | [job] retrieve thread has finished
[2025-02-25 18:13:36] 2025-02-25 23:13:20,971 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 18:13:36] 2025-02-25 23:13:21,075 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 18:13:36] 2025-02-25 23:13:21,188 | INFO     | [job] control thread has finished
[2025-02-25 18:13:36] 2025-02-25 23:13:21,298 | INFO     | [data] control thread has finished
[2025-02-25 18:13:36] 2025-02-25 23:13:21,346 | INFO     | all payload control threads have been joined
[2025-02-25 18:13:36] 2025-02-25 23:13:21,384 | INFO     | [payload] validate_post thread has finished
[2025-02-25 18:13:36] 2025-02-25 23:13:21,727 | INFO     | [job] job monitor thread has finished
[2025-02-25 18:13:36] 2025-02-25 23:13:21,750 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 18:13:36] 2025-02-25 23:13:21,832 | INFO     | [data] copytool_in thread has finished
[2025-02-25 18:13:36] 2025-02-25 23:13:21,953 | INFO     | [data] copytool_out thread has finished
[2025-02-25 18:13:36] 2025-02-25 23:13:21,999 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 18:13:36] 2025-02-25 23:13:22,117 | INFO     | [payload] failed_post thread has finished
[2025-02-25 18:13:36] 2025-02-25 23:13:22,144 | INFO     | [job] validate thread has finished
[2025-02-25 18:13:36] 2025-02-25 23:13:22,351 | INFO     | [payload] control thread has finished
[2025-02-25 18:13:36] 2025-02-25 23:13:25,755 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 18:13:36] 2025-02-25 23:13:30,325 | INFO     | job.realtimelogging is not enabled
[2025-02-25 18:13:36] 2025-02-25 23:13:31,331 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 18:13:36] 2025-02-25 23:13:31,520 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140074688124736)>', '<ExcThread(monitor, started 140074463409920)>']
[2025-02-25 18:13:36] 2025-02-25 23:13:31,779 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 18:13:36] 2025-02-25 23:13:31,780 | INFO     | [monitor] control thread has ended
[2025-02-25 18:13:36] 2025-02-25 23:13:36,523 | INFO     | all workflow threads have been joined
[2025-02-25 18:13:36] 2025-02-25 23:13:36,524 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 18:13:36] 2025-02-25 23:13:36,524 | INFO     | traces error code: 0
[2025-02-25 18:13:36] 2025-02-25 23:13:36,524 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 18:13:36] 2025-02-25 23:13:36,618 [wrapper] ==== pilot stdout END ====
[2025-02-25 18:13:36] 2025-02-25 23:13:36,622 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 18:13:36] 2025-02-25 23:13:36,626 [wrapper] pilotpid: 26775
[2025-02-25 18:13:36] 2025-02-25 23:13:36,630 [wrapper] Pilot exit status: 0
[2025-02-25 18:13:36] 2025-02-25 23:13:36,644 [wrapper] pandaids: 6531001472
[2025-02-25 18:13:36] 2025-02-25 23:13:36,683 [wrapper] cleanup supervisor_pilot 17261 26776
[2025-02-25 18:13:36] 2025-02-25 23:13:36,687 [wrapper] Test setup, not cleaning
[2025-02-25 18:13:36] 2025-02-25 23:13:36,695 [wrapper] apfmon messages muted
[2025-02-25 18:13:36] 2025-02-25 23:13:36,699 [wrapper] ==== wrapper stdout END ====
[2025-02-25 18:13:36] 2025-02-25 23:13:36,703 [wrapper] ==== wrapper stderr END ====
[2025-02-25 18:13:36]  *** Error codes and diagnostics ***
[2025-02-25 18:13:36]     "exeErrorCode": 0,
[2025-02-25 18:13:36]     "exeErrorDiag": "",
[2025-02-25 18:13:36]     "pilotErrorCode": 0,
[2025-02-25 18:13:36]     "pilotErrorDiag": "",
[2025-02-25 18:13:36]  *** Listing of results directory ***
[2025-02-25 18:13:36] total 430528
[2025-02-25 18:13:36] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 16:07 pilot3.tar.gz
[2025-02-25 18:13:36] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 16:38 queuedata.json
[2025-02-25 18:13:36] -rwx------ 1 boincer umatlas     35865 Feb 25 16:38 runpilot2-wrapper.sh
[2025-02-25 18:13:36] -rw-r--r-- 1 boincer umatlas       100 Feb 25 16:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 18:13:36] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 16:49 run_atlas
[2025-02-25 18:13:36] -rw-r--r-- 1 boincer umatlas       105 Feb 25 16:49 job.xml
[2025-02-25 18:13:36] -rw-r--r-- 2 boincer umatlas 250324556 Feb 25 16:49 EVNT.43401169._000060.pool.root.1
[2025-02-25 18:13:36] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 16:49 start_atlas.sh
[2025-02-25 18:13:36] drwxrwx--x 2 boincer umatlas      4096 Feb 25 16:49 shared
[2025-02-25 18:13:36] -rw-r--r-- 2 boincer umatlas    503554 Feb 25 16:49 input.tar.gz
[2025-02-25 18:13:36] -rw-r--r-- 1 boincer umatlas         0 Feb 25 16:49 boinc_lockfile
[2025-02-25 18:13:36] -rw-r--r-- 1 boincer umatlas      2543 Feb 25 16:49 pandaJob.out
[2025-02-25 18:13:36] -rw------- 1 boincer umatlas       424 Feb 25 16:49 setup.sh.local
[2025-02-25 18:13:36] -rw------- 1 boincer umatlas    987482 Feb 25 16:49 agis_schedconf.cvmfs.json
[2025-02-25 18:13:36] -rw------- 1 boincer umatlas   1573632 Feb 25 16:49 agis_ddmendpoints.agis.ALL.json
[2025-02-25 18:13:36] drwx------ 4 boincer umatlas      4096 Feb 25 16:49 pilot3
[2025-02-25 18:13:36] -rw------- 1 boincer umatlas        95 Feb 25 18:12 pilot_heartbeat.json
[2025-02-25 18:13:36] -rw------- 1 boincer umatlas 185077953 Feb 25 18:12 HITS.43401171._001498.pool.root.1
[2025-02-25 18:13:36] -rw-r--r-- 1 boincer umatlas       530 Feb 25 18:12 boinc_task_state.xml
[2025-02-25 18:13:36] -rw------- 1 boincer umatlas      1045 Feb 25 18:13 memory_monitor_summary.json
[2025-02-25 18:13:36] -rw------- 1 boincer umatlas    360349 Feb 25 18:13 log.43401171._001498.job.log.tgz.1
[2025-02-25 18:13:36] -rw------- 1 boincer umatlas      7762 Feb 25 18:13 heartbeat.json
[2025-02-25 18:13:36] -rw-r--r-- 1 boincer umatlas      5868 Feb 25 18:13 init_data.xml
[2025-02-25 18:13:36] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 18:13 boinc_mmap_file
[2025-02-25 18:13:36] -rw-r--r-- 1 boincer umatlas        27 Feb 25 18:13 wrapper_checkpoint.txt
[2025-02-25 18:13:36] -rw------- 1 boincer umatlas      4604 Feb 25 18:13 pilotlog.txt
[2025-02-25 18:13:36] -rw------- 1 boincer umatlas    471588 Feb 25 18:13 log.43401171._001498.job.log.1
[2025-02-25 18:13:36] -rw------- 1 boincer umatlas       357 Feb 25 18:13 output.list
[2025-02-25 18:13:36] -rw-r--r-- 1 boincer umatlas       620 Feb 25 18:13 runtime_log
[2025-02-25 18:13:36] -rw------- 1 boincer umatlas    849920 Feb 25 18:13 result.tar.gz
[2025-02-25 18:13:36] -rw------- 1 boincer umatlas       658 Feb 25 18:13 we7NDmSoH76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQGgKDmdTxUGn.diag
[2025-02-25 18:13:36] -rw-r--r-- 1 boincer umatlas     11015 Feb 25 18:13 runtime_log.err
[2025-02-25 18:13:36] -rw-r--r-- 1 boincer umatlas     21844 Feb 25 18:13 stderr.txt
[2025-02-25 18:13:36] HITS file was successfully produced:
[2025-02-25 18:13:36] -rw------- 1 boincer umatlas 185077953 Feb 25 18:12 shared/HITS.pool.root.1
[2025-02-25 18:13:36]  *** Contents of shared directory: ***
[2025-02-25 18:13:36] total 426548
[2025-02-25 18:13:36] -rw-r--r-- 2 boincer umatlas 250324556 Feb 25 16:49 ATLAS.root_0
[2025-02-25 18:13:36] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 16:49 start_atlas.sh
[2025-02-25 18:13:36] -rw-r--r-- 2 boincer umatlas    503554 Feb 25 16:49 input.tar.gz
[2025-02-25 18:13:36] -rw------- 1 boincer umatlas 185077953 Feb 25 18:12 HITS.pool.root.1
[2025-02-25 18:13:36] -rw------- 1 boincer umatlas    849920 Feb 25 18:13 result.tar.gz
18:13:37 (22805): run_atlas exited; CPU time 47486.779686
18:13:37 (22805): called boinc_finish(0)

</stderr_txt>
]]>

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