Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:37:06 (1015495): wrapper (7.7.26015): starting
14:37:06 (1015495): wrapper: running run_atlas (--nthreads 10)
[2025-02-25 14:37:06] Arguments: --nthreads 10
[2025-02-25 14:37:06] Threads: 10
[2025-02-25 14:37:06] Checking for CVMFS
[2025-02-25 14:37:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 14:37:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 14:37:07] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 14:37:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 14:37:07] 2.11.5.0 743315 28208 267348 143050 1 363 23028413 37641216 15753 130560 0 2508102 98.614 7761272 27656 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 14:37:07] CVMFS is ok
[2025-02-25 14:37:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 14:37:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 14:37:07] Further information can be found at the LHC@home message board.
[2025-02-25 14:37:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 14:37:07] Checking for apptainer binary...
[2025-02-25 14:37:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 14:37:07] Running /usr/bin/apptainer --version
[2025-02-25 14:37:07] apptainer version 1.3.6-1.el9
[2025-02-25 14:37:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 14:37:08] c-5-2.aglt2.org
[2025-02-25 14:37:08] apptainer works
[2025-02-25 14:37:08] Set ATHENA_PROC_NUMBER=10
[2025-02-25 14:37:08] Set ATHENA_CORE_NUMBER=10
[2025-02-25 14:37:08] Starting ATLAS job with PandaID=6530730037
[2025-02-25 14:37:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 18:29:14]  *** The last 200 lines of the pilot log: ***
[2025-02-25 18:29:14] 2025-02-25 23:28:58,621 | INFO     | model: linear, x: [1740512371.0, 1740512432.0, 1740512493.0, 1740512554.0, 1740512615.0, 1740512676.0, 1740512737.0, 1740512798.0, 1740512859.0, 1740512920.0, 1740
[2025-02-25 18:29:14] 2025-02-25 23:28:58,621 | INFO     | sum of square deviations: 3346810255.2217236
[2025-02-25 18:29:14] 2025-02-25 23:28:58,622 | INFO     | sum of deviations: 117034996821.47963
[2025-02-25 18:29:14] 2025-02-25 23:28:58,623 | INFO     | mean x: 1740519081.3348417
[2025-02-25 18:29:14] 2025-02-25 23:28:58,623 | INFO     | mean y: 2180051.561085973
[2025-02-25 18:29:14] 2025-02-25 23:28:58,623 | INFO     | -- intersect: -60862234007.7453
[2025-02-25 18:29:14] 2025-02-25 23:28:58,623 | INFO     | intersect: -60862234007.7453
[2025-02-25 18:29:14] 2025-02-25 23:28:58,623 | INFO     | chi2: 4.984008421192304
[2025-02-25 18:29:14] 2025-02-25 23:28:58,624 | INFO     | current chi2=4.984008421192304 (change=11.519084213091155 %)
[2025-02-25 18:29:14] 2025-02-25 23:28:58,624 | INFO     | right removable region: 220
[2025-02-25 18:29:14] 2025-02-25 23:28:58,625 | INFO     | model: linear, x: [1740512676.0, 1740512737.0, 1740512798.0, 1740512859.0, 1740512920.0, 1740512981.0, 1740513042.0, 1740513103.0, 1740513164.0, 1740513225.0, 1740
[2025-02-25 18:29:14] 2025-02-25 23:28:58,625 | INFO     | sum of square deviations: 3346765115.2217236
[2025-02-25 18:29:14] 2025-02-25 23:28:58,626 | INFO     | sum of deviations: 57183519819.46602
[2025-02-25 18:29:14] 2025-02-25 23:28:58,627 | INFO     | mean x: 1740519386.3348417
[2025-02-25 18:29:14] 2025-02-25 23:28:58,627 | INFO     | mean y: 2207797.6018099547
[2025-02-25 18:29:14] 2025-02-25 23:28:58,627 | INFO     | -- intersect: -29736665830.537296
[2025-02-25 18:29:14] 2025-02-25 23:28:58,627 | INFO     | intersect: -29736665830.537296
[2025-02-25 18:29:14] 2025-02-25 23:28:58,627 | INFO     | chi2: 2.989778602019714
[2025-02-25 18:29:14] 2025-02-25 23:28:58,627 | INFO     | current chi2=2.989778602019714 (change=46.922571883712045 %)
[2025-02-25 18:29:14] 2025-02-25 23:28:58,666 | INFO     | model: linear, x: [1740512981.0, 1740513042.0, 1740513103.0, 1740513164.0, 1740513225.0, 1740513286.0, 1740513347.0, 1740513408.0, 1740513469.0, 1740513530.0, 1740
[2025-02-25 18:29:14] 2025-02-25 23:28:58,666 | INFO     | sum of square deviations: 3124673264.64815
[2025-02-25 18:29:14] 2025-02-25 23:28:58,668 | INFO     | sum of deviations: 24282765706.240746
[2025-02-25 18:29:14] 2025-02-25 23:28:58,668 | INFO     | mean x: 1740519538.8425925
[2025-02-25 18:29:14] 2025-02-25 23:28:58,668 | INFO     | mean y: 2230373.212962963
[2025-02-25 18:29:14] 2025-02-25 23:28:58,668 | INFO     | -- intersect: -13523864865.934551
[2025-02-25 18:29:14] 2025-02-25 23:28:58,668 | INFO     | intersect: -13523864865.934551
[2025-02-25 18:29:14] 2025-02-25 23:28:58,669 | INFO     | chi2: 1.9922621497883228
[2025-02-25 18:29:14] 2025-02-25 23:28:58,669 | INFO     | current chi2=1.9922621497883228 (change=33.3642247475291 %)
[2025-02-25 18:29:14] 2025-02-25 23:28:58,669 | INFO     | model: linear, x: [1740513286.0, 1740513347.0, 1740513408.0, 1740513469.0, 1740513530.0, 1740513591.0, 1740513652.0, 1740513714.0, 1740513777.0, 1740513835.0, 1740
[2025-02-25 18:29:14] 2025-02-25 23:28:58,695 | INFO     | sum of square deviations: 2912628114.047379
[2025-02-25 18:29:14] 2025-02-25 23:28:58,697 | INFO     | sum of deviations: -5758632633.848343
[2025-02-25 18:29:14] 2025-02-25 23:28:58,697 | INFO     | mean x: 1740519691.3507109
[2025-02-25 18:29:14] 2025-02-25 23:28:58,697 | INFO     | mean y: 2251957.3222748814
[2025-02-25 18:29:14] 2025-02-25 23:28:58,697 | INFO     | -- intersect: 3443478609.6805468
[2025-02-25 18:29:14] 2025-02-25 23:28:58,697 | INFO     | intersect: 3443478609.6805468
[2025-02-25 18:29:14] 2025-02-25 23:28:58,698 | INFO     | chi2: 1.1191526769971125
[2025-02-25 18:29:14] 2025-02-25 23:28:58,698 | INFO     | current chi2=1.1191526769971125 (change=43.82502939605503 %)
[2025-02-25 18:29:14] 2025-02-25 23:28:58,698 | INFO     | model: linear, x: [1740513591.0, 1740513652.0, 1740513714.0, 1740513777.0, 1740513835.0, 1740513897.0, 1740513957.0, 1740514018.0, 1740514079.0, 1740514140.0, 1740
[2025-02-25 18:29:14] 2025-02-25 23:28:58,698 | INFO     | sum of square deviations: 2710397100.917473
[2025-02-25 18:29:14] 2025-02-25 23:28:58,700 | INFO     | sum of deviations: -15059315965.8835
[2025-02-25 18:29:14] 2025-02-25 23:28:58,700 | INFO     | mean x: 1740519843.8592234
[2025-02-25 18:29:14] 2025-02-25 23:28:58,700 | INFO     | mean y: 2258916.7281553396
[2025-02-25 18:29:14] 2025-02-25 23:28:58,700 | INFO     | -- intersect: 9672811716.793427
[2025-02-25 18:29:14] 2025-02-25 23:28:58,700 | INFO     | intersect: 9672811716.793427
[2025-02-25 18:29:14] 2025-02-25 23:28:58,701 | INFO     | chi2: 0.9927660558350699
[2025-02-25 18:29:14] 2025-02-25 23:28:58,701 | INFO     | current chi2=0.9927660558350699 (change=11.293063382662012 %)
[2025-02-25 18:29:14] 2025-02-25 23:28:58,702 | INFO     | left removable region: 40
[2025-02-25 18:29:14] 2025-02-25 23:28:58,702 | INFO     | model: linear, x: [1740514811.0, 1740514872.0, 1740514933.0, 1740514995.0, 1740515055.0, 1740515117.0, 1740515177.0, 1740515241.0, 1740515300.0, 1740515360.0, 1740
[2025-02-25 18:29:14] 2025-02-25 23:28:58,702 | INFO     | sum of square deviations: 1808156550.8000035
[2025-02-25 18:29:14] 2025-02-25 23:28:58,703 | INFO     | sum of deviations: 15011925421.399996
[2025-02-25 18:29:14] 2025-02-25 23:28:58,703 | INFO     | mean x: 1740520270.8666666
[2025-02-25 18:29:14] 2025-02-25 23:28:58,703 | INFO     | mean y: 2249861.183333333
[2025-02-25 18:29:14] 2025-02-25 23:28:58,704 | INFO     | -- intersect: -14448136356.273865
[2025-02-25 18:29:14] 2025-02-25 23:28:58,704 | INFO     | intersect: -14448136356.273865
[2025-02-25 18:29:14] 2025-02-25 23:28:58,704 | INFO     | chi2: 0.07606881121954556
[2025-02-25 18:29:14] 2025-02-25 23:28:58,704 | INFO     | -- intersect: -14448136356.273865
[2025-02-25 18:29:14] 2025-02-25 23:28:58,704 | INFO     | current memory leak: 8.30 B/s (using 180 data points, chi2=0.08)
[2025-02-25 18:29:14] 2025-02-25 23:28:58,706 | INFO     | ..............................
[2025-02-25 18:29:14] 2025-02-25 23:28:58,706 | INFO     | . Timing measurements:
[2025-02-25 18:29:14] 2025-02-25 23:28:58,706 | INFO     | . get job = 0 s
[2025-02-25 18:29:14] 2025-02-25 23:28:58,706 | INFO     | . initial setup = 6 s
[2025-02-25 18:29:14] 2025-02-25 23:28:58,706 | INFO     | . payload setup = 34 s
[2025-02-25 18:29:14] 2025-02-25 23:28:58,706 | INFO     | . stage-in = 0 s
[2025-02-25 18:29:14] 2025-02-25 23:28:58,706 | INFO     | . payload execution = 13749 s
[2025-02-25 18:29:14] 2025-02-25 23:28:58,706 | INFO     | . stage-out = 8 s
[2025-02-25 18:29:14] 2025-02-25 23:28:58,706 | INFO     | . log creation = 1 s
[2025-02-25 18:29:14] 2025-02-25 23:28:58,706 | INFO     | ..............................
[2025-02-25 18:29:14] 2025-02-25 23:28:58,922 | INFO     | 
[2025-02-25 18:29:14] 2025-02-25 23:28:58,923 | INFO     | job summary report
[2025-02-25 18:29:14] 2025-02-25 23:28:58,923 | INFO     | --------------------------------------------------
[2025-02-25 18:29:14] 2025-02-25 23:28:58,923 | INFO     | PanDA job id: 6530730037
[2025-02-25 18:29:14] 2025-02-25 23:28:58,923 | INFO     | task id: 43401163
[2025-02-25 18:29:14] 2025-02-25 23:28:58,923 | INFO     | errors: (none)
[2025-02-25 18:29:14] 2025-02-25 23:28:58,923 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 18:29:14] 2025-02-25 23:28:58,923 | INFO     | pilot state: finished 
[2025-02-25 18:29:14] 2025-02-25 23:28:58,924 | INFO     | transexitcode: 0
[2025-02-25 18:29:14] 2025-02-25 23:28:58,924 | INFO     | exeerrorcode: 0
[2025-02-25 18:29:14] 2025-02-25 23:28:58,924 | INFO     | exeerrordiag: 
[2025-02-25 18:29:14] 2025-02-25 23:28:58,924 | INFO     | exitcode: 0
[2025-02-25 18:29:14] 2025-02-25 23:28:58,924 | INFO     | exitmsg: OK
[2025-02-25 18:29:14] 2025-02-25 23:28:58,924 | INFO     | cpuconsumptiontime: 48177 s
[2025-02-25 18:29:14] 2025-02-25 23:28:58,924 | INFO     | nevents: 400
[2025-02-25 18:29:14] 2025-02-25 23:28:58,924 | INFO     | neventsw: 0
[2025-02-25 18:29:14] 2025-02-25 23:28:58,924 | INFO     | pid: 1035648
[2025-02-25 18:29:14] 2025-02-25 23:28:58,924 | INFO     | pgrp: 1035648
[2025-02-25 18:29:14] 2025-02-25 23:28:58,925 | INFO     | corecount: 10
[2025-02-25 18:29:14] 2025-02-25 23:28:58,925 | INFO     | event service: False
[2025-02-25 18:29:14] 2025-02-25 23:28:58,925 | INFO     | sizes: {0: 2369555, 1: 2370240, 2: 2370439, 13: 2370439, 20: 2370701, 24: 2370729, 13789: 2400912, 13790: 2400911, 13799: 2410160, 13802: 2410216, 13826: 2410386}
[2025-02-25 18:29:14] 2025-02-25 23:28:58,925 | INFO     | --------------------------------------------------
[2025-02-25 18:29:14] 2025-02-25 23:28:58,925 | INFO     | 
[2025-02-25 18:29:14] 2025-02-25 23:28:58,925 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-25 18:29:14] 2025-02-25 23:28:58,950 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 18:29:14] 2025-02-25 23:28:58,950 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 18:29:14] 2025-02-25 23:28:58,950 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 18:29:14] 2025-02-25 23:28:58,951 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 18:29:14] 2025-02-25 23:28:58,951 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 18:29:14] 2025-02-25 23:28:58,951 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 18:29:14] 2025-02-25 23:28:58,951 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 18:29:14] 2025-02-25 23:28:58,951 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 18:29:14] 2025-02-25 23:28:58,951 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 18:29:14] 2025-02-25 23:28:58,951 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 18:29:14] 2025-02-25 23:28:58,951 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 18:29:14] 2025-02-25 23:28:58,951 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 18:29:14] 2025-02-25 23:28:58,952 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 18:29:14] 2025-02-25 23:28:58,952 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 18:29:14] 2025-02-25 23:28:58,952 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 18:29:14] 2025-02-25 23:28:58,952 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 18:29:14] 2025-02-25 23:28:58,952 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 18:29:14] 2025-02-25 23:28:58,952 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 18:29:14] 2025-02-25 23:28:58,952 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 18:29:14] 2025-02-25 23:28:58,952 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 18:29:14] 2025-02-25 23:28:58,953 | INFO     | job 6530730037 has completed (purged errors)
[2025-02-25 18:29:14] 2025-02-25 23:28:58,953 | INFO     | overall cleanup function is called
[2025-02-25 18:29:14] 2025-02-25 23:29:00,008 | INFO     | --- collectZombieJob: --- 10, [1035648]
[2025-02-25 18:29:14] 2025-02-25 23:29:00,009 | INFO     | zombie collector waiting for pid 1035648
[2025-02-25 18:29:14] 2025-02-25 23:29:00,009 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 18:29:14] 2025-02-25 23:29:00,009 | INFO     | collected zombie processes
[2025-02-25 18:29:14] 2025-02-25 23:29:00,009 | INFO     | will attempt to kill all subprocesses of pid=1035648
[2025-02-25 18:29:14] 2025-02-25 23:29:01,531 | INFO     | process IDs to be killed: [1035648] (in reverse order)
[2025-02-25 18:29:14] 2025-02-25 23:29:02,106 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 18:29:14] 2025-02-25 23:29:02,106 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 18:29:14] 2025-02-25 23:29:02,143 | INFO     | did not find any defunct processes belonging to 1035648
[2025-02-25 18:29:14] 2025-02-25 23:29:02,185 | INFO     | did not find any defunct processes belonging to 1035648
[2025-02-25 18:29:14] 2025-02-25 23:29:02,185 | INFO     | ready for new job
[2025-02-25 18:29:14] 2025-02-25 23:29:02,186 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 18:29:14] 2025-02-25 23:29:02,187 | INFO     | **************************************
[2025-02-25 18:29:14] 2025-02-25 23:29:02,188 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 18:29:14] 2025-02-25 23:29:02,188 | INFO     | **************************************
[2025-02-25 18:29:14] 2025-02-25 23:29:02,188 | INFO     | 
[2025-02-25 18:29:14] 2025-02-25 23:29:02,204 | INFO     | architecture information:
[2025-02-25 18:29:14] 2025-02-25 23:29:02,207 | INFO     | executing command: cat /etc/os-release
[2025-02-25 18:29:14] 2025-02-25 23:29:02,305 | INFO     | cat /etc/os-release:
[2025-02-25 18:29:14] NAME="CentOS Linux"
[2025-02-25 18:29:14] VERSION="7 (Core)"
[2025-02-25 18:29:14] ID="centos"
[2025-02-25 18:29:14] ID_LIKE="rhel fedora"
[2025-02-25 18:29:14] VERSION_ID="7"
[2025-02-25 18:29:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 18:29:14] ANSI_COLOR="0;31"
[2025-02-25 18:29:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 18:29:14] HOME_URL="https://www.centos.org/"
[2025-02-25 18:29:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 18:29:14] 
[2025-02-25 18:29:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 18:29:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 18:29:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 18:29:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 18:29:14] 
[2025-02-25 18:29:14] 2025-02-25 23:29:02,305 | INFO     | **************************************
[2025-02-25 18:29:14] 2025-02-25 23:29:02,669 | INFO     | PID=1022950 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-25 18:29:14] 2025-02-25 23:29:02,669 | INFO     | .. there are 40 such processes running
[2025-02-25 18:29:14] 2025-02-25 23:29:02,808 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-25 18:29:14] 2025-02-25 23:29:02,867 | INFO     | sufficient remaining disk space (75963039744 B)
[2025-02-25 18:29:14] 2025-02-25 23:29:02,868 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 18:29:14] 2025-02-25 23:29:02,868 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 18:29:14] 2025-02-25 23:29:02,869 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 18:29:14] 2025-02-25 23:29:02,869 | INFO     | aborting loop
[2025-02-25 18:29:14] 2025-02-25 23:29:02,876 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 18:29:14] 2025-02-25 23:29:02,876 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 18:29:14] 2025-02-25 23:29:02,876 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 18:29:14] 2025-02-25 23:29:02,876 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 18:29:14] 2025-02-25 23:29:02,923 | INFO     | all data control threads have been joined
[2025-02-25 18:29:14] 2025-02-25 23:29:03,248 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 18:29:14] 2025-02-25 23:29:03,740 | INFO     | all payload control threads have been joined
[2025-02-25 18:29:14] 2025-02-25 23:29:03,874 | INFO     | [job] retrieve thread has finished
[2025-02-25 18:29:14] 2025-02-25 23:29:03,875 | INFO     | [job] job monitor thread has finished
[2025-02-25 18:29:14] 2025-02-25 23:29:03,928 | INFO     | [data] control thread has finished
[2025-02-25 18:29:14] 2025-02-25 23:29:03,942 | INFO     | all job control threads have been joined
[2025-02-25 18:29:14] 2025-02-25 23:29:03,976 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 18:29:14] 2025-02-25 23:29:03,976 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 18:29:14] 2025-02-25 23:29:03,976 | INFO     | [data] copytool_in thread has finished
[2025-02-25 18:29:14] 2025-02-25 23:29:04,237 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 18:29:14] 2025-02-25 23:29:04,443 | INFO     | [payload] failed_post thread has finished
[2025-02-25 18:29:14] 2025-02-25 23:29:04,524 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 18:29:14] 2025-02-25 23:29:04,748 | INFO     | [payload] control thread has finished
[2025-02-25 18:29:14] 2025-02-25 23:29:04,949 | INFO     | [job] control thread has finished
[2025-02-25 18:29:14] 2025-02-25 23:29:04,982 | INFO     | [job] queue monitor thread has finished
[2025-02-25 18:29:14] 2025-02-25 23:29:05,042 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 18:29:14] 2025-02-25 23:29:05,051 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 18:29:14] 2025-02-25 23:29:05,161 | INFO     | [payload] validate_post thread has finished
[2025-02-25 18:29:14] 2025-02-25 23:29:05,244 | INFO     | [job] validate thread has finished
[2025-02-25 18:29:14] 2025-02-25 23:29:05,266 | INFO     | [data] copytool_out thread has finished
[2025-02-25 18:29:14] 2025-02-25 23:29:08,246 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 18:29:14] 2025-02-25 23:29:08,650 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139840528537408)>', '<ExcThread(monitor, started 139840259593984)>']
[2025-02-25 18:29:14] 2025-02-25 23:29:08,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 18:29:14] 2025-02-25 23:29:08,910 | INFO     | [monitor] control thread has ended
[2025-02-25 18:29:14] 2025-02-25 23:29:13,676 | INFO     | all workflow threads have been joined
[2025-02-25 18:29:14] 2025-02-25 23:29:13,676 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 18:29:14] 2025-02-25 23:29:13,676 | INFO     | traces error code: 0
[2025-02-25 18:29:14] 2025-02-25 23:29:13,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 18:29:14] 2025-02-25 23:29:14,064 [wrapper] ==== pilot stdout END ====
[2025-02-25 18:29:14] 2025-02-25 23:29:14,068 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 18:29:14] 2025-02-25 23:29:14,089 [wrapper] pilotpid: 1022950
[2025-02-25 18:29:14] 2025-02-25 23:29:14,104 [wrapper] Pilot exit status: 0
[2025-02-25 18:29:14] 2025-02-25 23:29:14,241 [wrapper] pandaids: 6530730037
[2025-02-25 18:29:14] 2025-02-25 23:29:14,405 [wrapper] cleanup supervisor_pilot 2468069 1022951
[2025-02-25 18:29:14] 2025-02-25 23:29:14,424 [wrapper] Test setup, not cleaning
[2025-02-25 18:29:14] 2025-02-25 23:29:14,473 [wrapper] apfmon messages muted
[2025-02-25 18:29:14] 2025-02-25 23:29:14,476 [wrapper] ==== wrapper stdout END ====
[2025-02-25 18:29:14] 2025-02-25 23:29:14,480 [wrapper] ==== wrapper stderr END ====
[2025-02-25 18:29:14]  *** Error codes and diagnostics ***
[2025-02-25 18:29:14]     "exeErrorCode": 0,
[2025-02-25 18:29:14]     "exeErrorDiag": "",
[2025-02-25 18:29:14]     "pilotErrorCode": 0,
[2025-02-25 18:29:14]     "pilotErrorDiag": "",
[2025-02-25 18:29:14]  *** Listing of results directory ***
[2025-02-25 18:29:14] total 433140
[2025-02-25 18:29:14] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 13:15 pilot3.tar.gz
[2025-02-25 18:29:14] -rwx------. 1 boincer umatlas     35865 Feb 25 13:31 runpilot2-wrapper.sh
[2025-02-25 18:29:14] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 13:31 queuedata.json
[2025-02-25 18:29:14] -rw-r--r--. 1 boincer umatlas       100 Feb 25 14:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 18:29:14] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 14:37 run_atlas
[2025-02-25 18:29:14] -rw-r--r--. 1 boincer umatlas       105 Feb 25 14:37 job.xml
[2025-02-25 18:29:14] -rw-r--r--. 2 boincer umatlas 250333993 Feb 25 14:37 EVNT.43401161._000067.pool.root.1
[2025-02-25 18:29:14] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 14:37 shared
[2025-02-25 18:29:14] -rw-r--r--. 2 boincer umatlas    503552 Feb 25 14:37 input.tar.gz
[2025-02-25 18:29:14] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 14:37 start_atlas.sh
[2025-02-25 18:29:14] -rw-r--r--. 1 boincer umatlas         0 Feb 25 14:37 boinc_lockfile
[2025-02-25 18:29:14] -rw-r--r--. 1 boincer umatlas      2541 Feb 25 14:37 pandaJob.out
[2025-02-25 18:29:14] -rw-------. 1 boincer umatlas       467 Feb 25 14:37 setup.sh.local
[2025-02-25 18:29:14] -rw-------. 1 boincer umatlas    987482 Feb 25 14:37 agis_schedconf.cvmfs.json
[2025-02-25 18:29:14] drwx------. 4 boincer umatlas      4096 Feb 25 14:37 pilot3
[2025-02-25 18:29:14] -rw-------. 1 boincer umatlas 185917800 Feb 25 18:27 HITS.43401163._001668.pool.root.1
[2025-02-25 18:29:14] -rw-r--r--. 1 boincer umatlas       531 Feb 25 18:27 boinc_task_state.xml
[2025-02-25 18:29:14] -rw-r--r--. 1 boincer umatlas      6673 Feb 25 18:28 init_data.xml
[2025-02-25 18:29:14] -rw-------. 1 boincer umatlas      1042 Feb 25 18:28 memory_monitor_summary.json
[2025-02-25 18:29:14] -rw-------. 1 boincer umatlas   1573632 Feb 25 18:28 agis_ddmendpoints.agis.ALL.json
[2025-02-25 18:29:14] -rw-------. 1 boincer umatlas    426465 Feb 25 18:28 log.43401163._001668.job.log.tgz.1
[2025-02-25 18:29:14] -rw-------. 1 boincer umatlas        95 Feb 25 18:28 pilot_heartbeat.json
[2025-02-25 18:29:14] -rw-------. 1 boincer umatlas      7734 Feb 25 18:28 heartbeat.json
[2025-02-25 18:29:14] -rw-r--r--. 1 boincer umatlas        28 Feb 25 18:29 wrapper_checkpoint.txt
[2025-02-25 18:29:14] -rw-------. 1 boincer umatlas      4733 Feb 25 18:29 pilotlog.txt
[2025-02-25 18:29:14] -rw-------. 1 boincer umatlas   1316743 Feb 25 18:29 log.43401163._001668.job.log.1
[2025-02-25 18:29:14] -rw-------. 1 boincer umatlas       357 Feb 25 18:29 output.list
[2025-02-25 18:29:14] -rw-r--r--. 1 boincer umatlas       620 Feb 25 18:29 runtime_log
[2025-02-25 18:29:14] -rw-------. 1 boincer umatlas   1761280 Feb 25 18:29 result.tar.gz
[2025-02-25 18:29:14] -rw-r--r--. 1 boincer umatlas     11406 Feb 25 18:29 runtime_log.err
[2025-02-25 18:29:14] -rw-------. 1 boincer umatlas       654 Feb 25 18:29 fx2MDmGtE76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmtzwKDmzVZsNn.diag
[2025-02-25 18:29:14] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 18:29 boinc_mmap_file
[2025-02-25 18:29:14] -rw-r--r--. 1 boincer umatlas     21837 Feb 25 18:29 stderr.txt
[2025-02-25 18:29:14] HITS file was successfully produced:
[2025-02-25 18:29:14] -rw-------. 1 boincer umatlas 185917800 Feb 25 18:27 shared/HITS.pool.root.1
[2025-02-25 18:29:14]  *** Contents of shared directory: ***
[2025-02-25 18:29:14] total 428268
[2025-02-25 18:29:14] -rw-r--r--. 2 boincer umatlas 250333993 Feb 25 14:37 ATLAS.root_0
[2025-02-25 18:29:14] -rw-r--r--. 2 boincer umatlas    503552 Feb 25 14:37 input.tar.gz
[2025-02-25 18:29:14] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 14:37 start_atlas.sh
[2025-02-25 18:29:14] -rw-------. 1 boincer umatlas 185917800 Feb 25 18:27 HITS.pool.root.1
[2025-02-25 18:29:14] -rw-------. 1 boincer umatlas   1761280 Feb 25 18:29 result.tar.gz
18:29:17 (1015495): run_atlas exited; CPU time 48188.170044
18:29:17 (1015495): called boinc_finish(0)

</stderr_txt>
]]>

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