Name zygMDmicF76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmNAgKDm4sBfkm_0
Workunit 230558809
Created 25 Feb 2025, 19:18:38 UTC
Sent 25 Feb 2025, 19:19:04 UTC
Report deadline 5 Mar 2025, 19:19:04 UTC
Received 25 Feb 2025, 20:43:19 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10696776
Run time 1 hours 23 min 10 sec
CPU time 13 hours 3 min 3 sec
Validate state Valid
Credit 375.10
Device peak FLOPS 34.25 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.72 GB
Peak swap size 3.22 GB
Peak disk usage 661.45 MB

Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:19:24 (29083): wrapper (7.7.26015): starting
14:19:24 (29083): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 14:19:24] Arguments: --nthreads 12
[2025-02-25 14:19:24] Threads: 12
[2025-02-25 14:19:24] Checking for CVMFS
[2025-02-25 14:19:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 14:19:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 14:19:24] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 14:19:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 14:19:25] 2.11.2.0 13814 323470 146352 143050 3 55 16760544 20275200 1 130560 0 24184613 99.944 8502693 40801 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 14:19:25] CVMFS is ok
[2025-02-25 14:19:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 14:19:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 14:19:25] Further information can be found at the LHC@home message board.
[2025-02-25 14:19:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 14:19:25] Checking for apptainer binary...
[2025-02-25 14:19:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 14:19:25] Running /usr/bin/apptainer --version
[2025-02-25 14:19:25] apptainer version 1.3.2-1.el7
[2025-02-25 14:19:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 14:19:26] c-205-7.aglt2.org
[2025-02-25 14:19:26] apptainer works
[2025-02-25 14:19:26] Set ATHENA_PROC_NUMBER=12
[2025-02-25 14:19:26] Set ATHENA_CORE_NUMBER=12
[2025-02-25 14:19:26] Starting ATLAS job with PandaID=6530793280
[2025-02-25 14:19:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 15:42:31]  *** The last 200 lines of the pilot log: ***
[2025-02-25 15:42:31] ]
[2025-02-25 15:42:31] 2025-02-25 20:42:01,002 | INFO     | transferring file log.43401137._002119.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530793280/log.43401137._002119.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 15:42:31] 2025-02-25 20:42:01,002 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530793280/log.43401137._002119.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401137._002119.job
[2025-02-25 15:42:31] 2025-02-25 20:42:01,031 | INFO     | adding to output.list: log.43401137._002119.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/0f/log.43401137._002119.job.log.tg
[2025-02-25 15:42:31] 2025-02-25 20:42:01,032 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 15:42:31] 2025-02-25 20:42:01,032 | INFO     | summary of transferred files:
[2025-02-25 15:42:31] 2025-02-25 20:42:01,033 | INFO     |  -- lfn=log.43401137._002119.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 15:42:31] 2025-02-25 20:42:01,033 | INFO     | stage-out finished correctly
[2025-02-25 15:42:31] 2025-02-25 20:42:02,716 | WARNING  | process 8020 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 15:42:31] 2025-02-25 20:42:02,716 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530793280/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 15:42:31] 2025-02-25 20:42:02,718 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530793280/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 15:42:31] 2025-02-25 20:42:02,719 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3717042 B
[2025-02-25 15:42:31] 2025-02-25 20:42:02,719 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15534 B
[2025-02-25 15:42:31] 2025-02-25 20:42:02,719 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 15:42:31] 2025-02-25 20:42:02,735 | INFO     | sufficient remaining disk space (29358030848 B)
[2025-02-25 15:42:31] 2025-02-25 20:42:02,736 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-02-25 15:42:31] 2025-02-25 20:42:02,737 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6530793280: 4017120 B (within 2537553920 B limit)
[2025-02-25 15:42:31] 2025-02-25 20:42:02,737 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6530793280/HITS.43401137._002119.pool.root.1 does not exist (skip from workdir size calculation)
[2025-02-25 15:42:31] 2025-02-25 20:42:02,737 | INFO     | total size of present files: 0 B (workdir size: 4017120 B)
[2025-02-25 15:42:31] 2025-02-25 20:42:02,737 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6530793280/HITS.43401137._002119.pool.root.1 since it does not exist
[2025-02-25 15:42:31] 2025-02-25 20:42:02,800 | INFO     | number of running child processes to parent process 8020: 1
[2025-02-25 15:42:31] 2025-02-25 20:42:02,800 | INFO     | maximum number of monitored processes: 6
[2025-02-25 15:42:31] 2025-02-25 20:42:03,125 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 15:42:31] 2025-02-25 20:42:04,173 | INFO     | PID=32690 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-25 15:42:31] 2025-02-25 20:42:05,303 | INFO     | monitor loop #362: job 0:6530793280 is in state 'finished'
[2025-02-25 15:42:31] 2025-02-25 20:42:05,303 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 15:42:31] 2025-02-25 20:42:06,076 | INFO     | job 6530793280 has state=finished
[2025-02-25 15:42:31] 2025-02-25 20:42:06,077 | INFO     | preparing for final server update for job 6530793280 in state='finished'
[2025-02-25 15:42:31] 2025-02-25 20:42:06,083 | INFO     | this job has now completed (state=finished)
[2025-02-25 15:42:31] 2025-02-25 20:42:06,083 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 15:42:31] 2025-02-25 20:42:06,083 | INFO     | log transfer has been attempted: DONE
[2025-02-25 15:42:31] 2025-02-25 20:42:06,083 | INFO     | job 6530793280 has finished - writing final server update
[2025-02-25 15:42:31] 2025-02-25 20:42:06,083 | INFO     | total number of processed events: 400 (read)
[2025-02-25 15:42:31] 2025-02-25 20:42:06,085 | INFO     | executing command: lscpu
[2025-02-25 15:42:31] 2025-02-25 20:42:06,110 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 15:42:31] 2025-02-25 20:42:06,124 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 15:42:31] 2025-02-25 20:42:07,806 | INFO     | monitor loop #363: job 0:6530793280 is in state 'finished'
[2025-02-25 15:42:31] 2025-02-25 20:42:07,806 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 15:42:31] 2025-02-25 20:42:10,309 | INFO     | monitor loop #364: job 0:6530793280 is in state 'finished'
[2025-02-25 15:42:31] 2025-02-25 20:42:10,309 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 15:42:31] 2025-02-25 20:42:11,208 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 15:42:31] 2025-02-25 20:42:11,214 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530793280/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 15:42:31] 2025-02-25 20:42:11,215 | INFO     | extracted standard info from prmon json
[2025-02-25 15:42:31] 2025-02-25 20:42:11,215 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 15:42:31] 2025-02-25 20:42:11,215 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 15:42:31] 2025-02-25 20:42:11,216 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 15:42:31] 2025-02-25 20:42:11,216 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 15:42:31] 2025-02-25 20:42:11,218 | INFO     | fitting pss+swap vs Time
[2025-02-25 15:42:31] 2025-02-25 20:42:11,218 | INFO     | model: linear, x: [1740511513.0, 1740511574.0, 1740511635.0, 1740511696.0, 1740511757.0, 1740511818.0, 1740511879.0, 1740511940.0, 1740512001.0, 1740512062.0, 1740
[2025-02-25 15:42:31] 2025-02-25 20:42:11,218 | INFO     | sum of square deviations: 125630262.5
[2025-02-25 15:42:31] 2025-02-25 20:42:11,218 | INFO     | sum of deviations: 19179760483.000004
[2025-02-25 15:42:31] 2025-02-25 20:42:11,219 | INFO     | mean x: 1740513739.5
[2025-02-25 15:42:31] 2025-02-25 20:42:11,219 | INFO     | mean y: 2698480.4324324327
[2025-02-25 15:42:31] 2025-02-25 20:42:11,219 | INFO     | -- intersect: -265718601281.8813
[2025-02-25 15:42:31] 2025-02-25 20:42:11,219 | INFO     | intersect: -265718601281.8813
[2025-02-25 15:42:31] 2025-02-25 20:42:11,219 | INFO     | chi2: 2.408552397612026
[2025-02-25 15:42:31] 2025-02-25 20:42:11,219 | INFO     | -- intersect: -265718601281.8813
[2025-02-25 15:42:31] 2025-02-25 20:42:11,219 | INFO     | current memory leak: 152.67 B/s (using 74 data points, chi2=2.41)
[2025-02-25 15:42:31] 2025-02-25 20:42:11,220 | INFO     | ..............................
[2025-02-25 15:42:31] 2025-02-25 20:42:11,220 | INFO     | . Timing measurements:
[2025-02-25 15:42:31] 2025-02-25 20:42:11,220 | INFO     | . get job = 0 s
[2025-02-25 15:42:31] 2025-02-25 20:42:11,220 | INFO     | . initial setup = 2 s
[2025-02-25 15:42:31] 2025-02-25 20:42:11,220 | INFO     | . payload setup = 7 s
[2025-02-25 15:42:31] 2025-02-25 20:42:11,220 | INFO     | . stage-in = 0 s
[2025-02-25 15:42:31] 2025-02-25 20:42:11,220 | INFO     | . payload execution = 4913 s
[2025-02-25 15:42:31] 2025-02-25 20:42:11,220 | INFO     | . stage-out = 0 s
[2025-02-25 15:42:31] 2025-02-25 20:42:11,220 | INFO     | . log creation = 0 s
[2025-02-25 15:42:31] 2025-02-25 20:42:11,221 | INFO     | ..............................
[2025-02-25 15:42:31] 2025-02-25 20:42:11,319 | INFO     | 
[2025-02-25 15:42:31] 2025-02-25 20:42:11,320 | INFO     | job summary report
[2025-02-25 15:42:31] 2025-02-25 20:42:11,320 | INFO     | --------------------------------------------------
[2025-02-25 15:42:31] 2025-02-25 20:42:11,320 | INFO     | PanDA job id: 6530793280
[2025-02-25 15:42:31] 2025-02-25 20:42:11,320 | INFO     | task id: 43401137
[2025-02-25 15:42:31] 2025-02-25 20:42:11,320 | INFO     | errors: (none)
[2025-02-25 15:42:31] 2025-02-25 20:42:11,321 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 15:42:31] 2025-02-25 20:42:11,321 | INFO     | pilot state: finished 
[2025-02-25 15:42:31] 2025-02-25 20:42:11,321 | INFO     | transexitcode: 0
[2025-02-25 15:42:31] 2025-02-25 20:42:11,321 | INFO     | exeerrorcode: 0
[2025-02-25 15:42:31] 2025-02-25 20:42:11,321 | INFO     | exeerrordiag: 
[2025-02-25 15:42:31] 2025-02-25 20:42:11,321 | INFO     | exitcode: 0
[2025-02-25 15:42:31] 2025-02-25 20:42:11,322 | INFO     | exitmsg: OK
[2025-02-25 15:42:31] 2025-02-25 20:42:11,322 | INFO     | cpuconsumptiontime: 46992 s
[2025-02-25 15:42:31] 2025-02-25 20:42:11,322 | INFO     | nevents: 400
[2025-02-25 15:42:31] 2025-02-25 20:42:11,322 | INFO     | neventsw: 0
[2025-02-25 15:42:31] 2025-02-25 20:42:11,322 | INFO     | pid: 8020
[2025-02-25 15:42:31] 2025-02-25 20:42:11,322 | INFO     | pgrp: 8020
[2025-02-25 15:42:31] 2025-02-25 20:42:11,323 | INFO     | corecount: 12
[2025-02-25 15:42:31] 2025-02-25 20:42:11,323 | INFO     | event service: False
[2025-02-25 15:42:31] 2025-02-25 20:42:11,323 | INFO     | sizes: {0: 2376954, 5: 2377160, 11: 2377216, 4924: 2403294, 4925: 2412235, 4927: 2412319, 4935: 2412617}
[2025-02-25 15:42:31] 2025-02-25 20:42:11,323 | INFO     | --------------------------------------------------
[2025-02-25 15:42:31] 2025-02-25 20:42:11,323 | INFO     | 
[2025-02-25 15:42:31] 2025-02-25 20:42:11,323 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 15:42:31] 2025-02-25 20:42:11,348 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 15:42:31] 2025-02-25 20:42:11,349 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 15:42:31] 2025-02-25 20:42:11,349 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 15:42:31] 2025-02-25 20:42:11,349 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 15:42:31] 2025-02-25 20:42:11,349 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 15:42:31] 2025-02-25 20:42:11,349 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 15:42:31] 2025-02-25 20:42:11,350 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 15:42:31] 2025-02-25 20:42:11,350 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 15:42:31] 2025-02-25 20:42:11,350 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 15:42:31] 2025-02-25 20:42:11,350 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 15:42:31] 2025-02-25 20:42:11,350 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 15:42:31] 2025-02-25 20:42:11,350 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 15:42:31] 2025-02-25 20:42:11,350 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 15:42:31] 2025-02-25 20:42:11,351 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 15:42:31] 2025-02-25 20:42:11,351 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 15:42:31] 2025-02-25 20:42:11,351 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 15:42:31] 2025-02-25 20:42:11,351 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 15:42:31] 2025-02-25 20:42:11,351 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 15:42:31] 2025-02-25 20:42:11,351 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 15:42:31] 2025-02-25 20:42:11,352 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 15:42:31] 2025-02-25 20:42:11,352 | INFO     | job 6530793280 has completed (purged errors)
[2025-02-25 15:42:31] 2025-02-25 20:42:11,352 | INFO     | overall cleanup function is called
[2025-02-25 15:42:31] 2025-02-25 20:42:12,360 | INFO     | --- collectZombieJob: --- 10, [8020]
[2025-02-25 15:42:31] 2025-02-25 20:42:12,360 | INFO     | zombie collector waiting for pid 8020
[2025-02-25 15:42:31] 2025-02-25 20:42:12,360 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 15:42:31] 2025-02-25 20:42:12,361 | INFO     | collected zombie processes
[2025-02-25 15:42:31] 2025-02-25 20:42:12,361 | INFO     | will attempt to kill all subprocesses of pid=8020
[2025-02-25 15:42:31] 2025-02-25 20:42:12,427 | INFO     | process IDs to be killed: [8020] (in reverse order)
[2025-02-25 15:42:31] 2025-02-25 20:42:12,473 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 15:42:31] 2025-02-25 20:42:12,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 15:42:31] 2025-02-25 20:42:12,477 | INFO     | did not find any defunct processes belonging to 8020
[2025-02-25 15:42:31] 2025-02-25 20:42:12,479 | INFO     | did not find any defunct processes belonging to 8020
[2025-02-25 15:42:31] 2025-02-25 20:42:12,479 | INFO     | ready for new job
[2025-02-25 15:42:31] 2025-02-25 20:42:12,479 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 15:42:31] 2025-02-25 20:42:12,480 | INFO     | **************************************
[2025-02-25 15:42:31] 2025-02-25 20:42:12,481 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 15:42:31] 2025-02-25 20:42:12,481 | INFO     | **************************************
[2025-02-25 15:42:31] 2025-02-25 20:42:12,481 | INFO     | 
[2025-02-25 15:42:31] 2025-02-25 20:42:12,482 | INFO     | architecture information:
[2025-02-25 15:42:31] 2025-02-25 20:42:12,482 | INFO     | executing command: cat /etc/os-release
[2025-02-25 15:42:31] 2025-02-25 20:42:12,496 | INFO     | cat /etc/os-release:
[2025-02-25 15:42:31] NAME="CentOS Linux"
[2025-02-25 15:42:31] VERSION="7 (Core)"
[2025-02-25 15:42:31] ID="centos"
[2025-02-25 15:42:31] ID_LIKE="rhel fedora"
[2025-02-25 15:42:31] VERSION_ID="7"
[2025-02-25 15:42:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 15:42:31] ANSI_COLOR="0;31"
[2025-02-25 15:42:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 15:42:31] HOME_URL="https://www.centos.org/"
[2025-02-25 15:42:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 15:42:31] 
[2025-02-25 15:42:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 15:42:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 15:42:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 15:42:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 15:42:31] 
[2025-02-25 15:42:31] 2025-02-25 20:42:12,497 | INFO     | **************************************
[2025-02-25 15:42:31] 2025-02-25 20:42:12,999 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 15:42:31] 2025-02-25 20:42:13,014 | INFO     | sufficient remaining disk space (29362225152 B)
[2025-02-25 15:42:31] 2025-02-25 20:42:13,014 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 15:42:31] 2025-02-25 20:42:13,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 15:42:31] 2025-02-25 20:42:13,015 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 15:42:31] 2025-02-25 20:42:13,016 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 15:42:31] 2025-02-25 20:42:13,016 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 15:42:31] 2025-02-25 20:42:13,016 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 15:42:31] 2025-02-25 20:42:13,016 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 15:42:31] 2025-02-25 20:42:13,172 | INFO     | all data control threads have been joined
[2025-02-25 15:42:31] 2025-02-25 20:42:13,385 | INFO     | all payload control threads have been joined
[2025-02-25 15:42:31] 2025-02-25 20:42:13,717 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 15:42:31] 2025-02-25 20:42:13,817 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 15:42:31] 2025-02-25 20:42:13,817 | INFO     | aborting loop
[2025-02-25 15:42:31] 2025-02-25 20:42:14,020 | INFO     | [job] retrieve thread has finished
[2025-02-25 15:42:31] 2025-02-25 20:42:14,022 | INFO     | [job] queue monitor thread has finished
[2025-02-25 15:42:31] 2025-02-25 20:42:14,094 | INFO     | [payload] validate_post thread has finished
[2025-02-25 15:42:31] 2025-02-25 20:42:14,132 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 15:42:31] 2025-02-25 20:42:14,177 | INFO     | [data] control thread has finished
[2025-02-25 15:42:31] 2025-02-25 20:42:14,390 | INFO     | [payload] control thread has finished
[2025-02-25 15:42:31] 2025-02-25 20:42:14,397 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 15:42:31] 2025-02-25 20:42:14,642 | INFO     | [payload] failed_post thread has finished
[2025-02-25 15:42:31] 2025-02-25 20:42:14,649 | INFO     | all job control threads have been joined
[2025-02-25 15:42:31] 2025-02-25 20:42:14,719 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 15:42:31] 2025-02-25 20:42:14,817 | INFO     | [data] copytool_in thread has finished
[2025-02-25 15:42:31] 2025-02-25 20:42:14,823 | INFO     | [job] job monitor thread has finished
[2025-02-25 15:42:31] 2025-02-25 20:42:15,435 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 15:42:31] 2025-02-25 20:42:15,442 | INFO     | [job] validate thread has finished
[2025-02-25 15:42:31] 2025-02-25 20:42:15,654 | INFO     | [job] control thread has finished
[2025-02-25 15:42:31] 2025-02-25 20:42:16,138 | INFO     | [data] copytool_out thread has finished
[2025-02-25 15:42:31] 2025-02-25 20:42:17,722 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 15:42:31] 2025-02-25 20:42:23,897 | INFO     | job.realtimelogging is not enabled
[2025-02-25 15:42:31] 2025-02-25 20:42:24,902 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 15:42:31] 2025-02-25 20:42:26,335 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140588341421888)>', '<ExcThread(monitor, started 140587617474304)>']
[2025-02-25 15:42:31] 2025-02-25 20:42:27,088 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 15:42:31] 2025-02-25 20:42:27,088 | INFO     | [monitor] control thread has ended
[2025-02-25 15:42:31] 2025-02-25 20:42:31,345 | INFO     | all workflow threads have been joined
[2025-02-25 15:42:31] 2025-02-25 20:42:31,345 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 15:42:31] 2025-02-25 20:42:31,345 | INFO     | traces error code: 0
[2025-02-25 15:42:31] 2025-02-25 20:42:31,345 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 15:42:31] 2025-02-25 20:42:31,427 [wrapper] ==== pilot stdout END ====
[2025-02-25 15:42:31] 2025-02-25 20:42:31,431 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 15:42:31] 2025-02-25 20:42:31,434 [wrapper] pilotpid: 32690
[2025-02-25 15:42:31] 2025-02-25 20:42:31,438 [wrapper] Pilot exit status: 0
[2025-02-25 15:42:31] 2025-02-25 20:42:31,454 [wrapper] pandaids: 6530793280
[2025-02-25 15:42:31] 2025-02-25 20:42:31,496 [wrapper] cleanup supervisor_pilot 26285 32691
[2025-02-25 15:42:31] 2025-02-25 20:42:31,500 [wrapper] Test setup, not cleaning
[2025-02-25 15:42:31] 2025-02-25 20:42:31,508 [wrapper] apfmon messages muted
[2025-02-25 15:42:31] 2025-02-25 20:42:31,512 [wrapper] ==== wrapper stdout END ====
[2025-02-25 15:42:31] 2025-02-25 20:42:31,516 [wrapper] ==== wrapper stderr END ====
[2025-02-25 15:42:31]  *** Error codes and diagnostics ***
[2025-02-25 15:42:31]     "exeErrorCode": 0,
[2025-02-25 15:42:31]     "exeErrorDiag": "",
[2025-02-25 15:42:31]     "pilotErrorCode": 0,
[2025-02-25 15:42:31]     "pilotErrorDiag": "",
[2025-02-25 15:42:31]  *** Listing of results directory ***
[2025-02-25 15:42:31] total 430080
[2025-02-25 15:42:31] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 14:07 pilot3.tar.gz
[2025-02-25 15:42:31] -rwx------ 1 boincer umatlas     35865 Feb 25 14:18 runpilot2-wrapper.sh
[2025-02-25 15:42:31] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 14:18 queuedata.json
[2025-02-25 15:42:31] -rw-r--r-- 1 boincer umatlas       100 Feb 25 14:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 15:42:31] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 14:19 run_atlas
[2025-02-25 15:42:31] -rw-r--r-- 1 boincer umatlas       105 Feb 25 14:19 job.xml
[2025-02-25 15:42:31] -rw-r--r-- 2 boincer umatlas 251397050 Feb 25 14:19 EVNT.43401135._000089.pool.root.1
[2025-02-25 15:42:31] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 14:19 start_atlas.sh
[2025-02-25 15:42:31] drwxrwx--x 2 boincer umatlas      4096 Feb 25 14:19 shared
[2025-02-25 15:42:31] -rw-r--r-- 2 boincer umatlas    503555 Feb 25 14:19 input.tar.gz
[2025-02-25 15:42:31] -rw-r--r-- 1 boincer umatlas         0 Feb 25 14:19 boinc_lockfile
[2025-02-25 15:42:31] -rw-r--r-- 1 boincer umatlas      2555 Feb 25 14:19 pandaJob.out
[2025-02-25 15:42:31] -rw------- 1 boincer umatlas       424 Feb 25 14:19 setup.sh.local
[2025-02-25 15:42:31] -rw------- 1 boincer umatlas    987482 Feb 25 14:19 agis_schedconf.cvmfs.json
[2025-02-25 15:42:31] -rw------- 1 boincer umatlas   1577983 Feb 25 14:19 agis_ddmendpoints.agis.ALL.json
[2025-02-25 15:42:31] drwx------ 4 boincer umatlas      4096 Feb 25 14:19 pilot3
[2025-02-25 15:42:31] -rw-r--r-- 1 boincer umatlas      5868 Feb 25 15:38 init_data.xml
[2025-02-25 15:42:31] -rw------- 1 boincer umatlas 183580824 Feb 25 15:41 HITS.43401137._002119.pool.root.1
[2025-02-25 15:42:31] -rw------- 1 boincer umatlas        95 Feb 25 15:41 pilot_heartbeat.json
[2025-02-25 15:42:31] -rw------- 1 boincer umatlas      1043 Feb 25 15:41 memory_monitor_summary.json
[2025-02-25 15:42:31] -rw------- 1 boincer umatlas    350350 Feb 25 15:42 log.43401137._002119.job.log.tgz.1
[2025-02-25 15:42:31] -rw-r--r-- 1 boincer umatlas       529 Feb 25 15:42 boinc_task_state.xml
[2025-02-25 15:42:31] -rw------- 1 boincer umatlas      7754 Feb 25 15:42 heartbeat.json
[2025-02-25 15:42:31] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 15:42 boinc_mmap_file
[2025-02-25 15:42:31] -rw-r--r-- 1 boincer umatlas        27 Feb 25 15:42 wrapper_checkpoint.txt
[2025-02-25 15:42:31] -rw------- 1 boincer umatlas      4410 Feb 25 15:42 pilotlog.txt
[2025-02-25 15:42:31] -rw------- 1 boincer umatlas    463070 Feb 25 15:42 log.43401137._002119.job.log.1
[2025-02-25 15:42:31] -rw------- 1 boincer umatlas       357 Feb 25 15:42 output.list
[2025-02-25 15:42:31] -rw-r--r-- 1 boincer umatlas       620 Feb 25 15:42 runtime_log
[2025-02-25 15:42:31] -rw------- 1 boincer umatlas    829440 Feb 25 15:42 result.tar.gz
[2025-02-25 15:42:31] -rw------- 1 boincer umatlas       657 Feb 25 15:42 zygMDmicF76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmNAgKDm4sBfkm.diag
[2025-02-25 15:42:31] -rw-r--r-- 1 boincer umatlas     11010 Feb 25 15:42 runtime_log.err
[2025-02-25 15:42:31] -rw-r--r-- 1 boincer umatlas     22799 Feb 25 15:42 stderr.txt
[2025-02-25 15:42:31] HITS file was successfully produced:
[2025-02-25 15:42:31] -rw------- 1 boincer umatlas 183580824 Feb 25 15:41 shared/HITS.pool.root.1
[2025-02-25 15:42:31]  *** Contents of shared directory: ***
[2025-02-25 15:42:31] total 426112
[2025-02-25 15:42:31] -rw-r--r-- 2 boincer umatlas 251397050 Feb 25 14:19 ATLAS.root_0
[2025-02-25 15:42:31] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 14:19 start_atlas.sh
[2025-02-25 15:42:31] -rw-r--r-- 2 boincer umatlas    503555 Feb 25 14:19 input.tar.gz
[2025-02-25 15:42:31] -rw------- 1 boincer umatlas 183580824 Feb 25 15:41 HITS.pool.root.1
[2025-02-25 15:42:31] -rw------- 1 boincer umatlas    829440 Feb 25 15:42 result.tar.gz
15:42:33 (29083): run_atlas exited; CPU time 46920.101755
15:42:33 (29083): called boinc_finish(0)

</stderr_txt>
]]>


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