Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:56:55 (5015): wrapper (7.7.26015): starting
13:56:55 (5015): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 13:56:55] Arguments: --nthreads 12
[2025-02-25 13:56:55] Threads: 12
[2025-02-25 13:56:55] Checking for CVMFS
[2025-02-25 13:56:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 13:56:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 13:56:55] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 13:56:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 13:56:56] 2.11.2.0 5277 293529 153948 143048 2 56 19332918 20275200 1 130560 0 25003468 99.986 7780571 41143 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 13:56:56] CVMFS is ok
[2025-02-25 13:56:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 13:56:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 13:56:56] Further information can be found at the LHC@home message board.
[2025-02-25 13:56:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 13:56:56] Checking for apptainer binary...
[2025-02-25 13:56:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 13:56:56] Running /usr/bin/apptainer --version
[2025-02-25 13:56:56] apptainer version 1.3.2-1.el7
[2025-02-25 13:56:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 13:56:57] c-205-15.aglt2.org
[2025-02-25 13:56:57] apptainer works
[2025-02-25 13:56:57] Set ATHENA_PROC_NUMBER=12
[2025-02-25 13:56:57] Set ATHENA_CORE_NUMBER=12
[2025-02-25 13:56:57] Starting ATLAS job with PandaID=6530730108
[2025-02-25 13:56:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 15:19:37]  *** The last 200 lines of the pilot log: ***
[2025-02-25 15:19:37]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-25 15:19:37]  is_altstaged=None
[2025-02-25 15:19:37]  is_tar=False
[2025-02-25 15:19:37]  lfn=log.43401163._001739.job.log.tgz.1
[2025-02-25 15:19:37]  mtime=0
[2025-02-25 15:19:37]  protocol_id=None
[2025-02-25 15:19:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 15:19:37]  replicas=None
[2025-02-25 15:19:37]  scope=mc23_13p6TeV
[2025-02-25 15:19:37]  status=None
[2025-02-25 15:19:37]  status_code=0
[2025-02-25 15:19:37]  storage_token=
[2025-02-25 15:19:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530730108/log.43401163._001739.job.log.tgz.1
[2025-02-25 15:19:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/84/log.43401163._001739.job.log.tgz.1
[2025-02-25 15:19:37]  workdir=None
[2025-02-25 15:19:37] ]
[2025-02-25 15:19:37] 2025-02-25 20:19:12,725 | INFO     | transferring file log.43401163._001739.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530730108/log.43401163._001739.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 15:19:37] 2025-02-25 20:19:12,725 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530730108/log.43401163._001739.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401163._001739.job
[2025-02-25 15:19:37] 2025-02-25 20:19:12,747 | INFO     | adding to output.list: log.43401163._001739.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/84/log.43401163._001739.job.log.tg
[2025-02-25 15:19:37] 2025-02-25 20:19:12,748 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 15:19:37] 2025-02-25 20:19:12,748 | INFO     | summary of transferred files:
[2025-02-25 15:19:37] 2025-02-25 20:19:12,748 | INFO     |  -- lfn=log.43401163._001739.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 15:19:37] 2025-02-25 20:19:12,748 | INFO     | stage-out finished correctly
[2025-02-25 15:19:37] 2025-02-25 20:19:12,832 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 15:19:37] 2025-02-25 20:19:13,279 | INFO     | job 6530730108 has state=finished
[2025-02-25 15:19:37] 2025-02-25 20:19:13,279 | INFO     | preparing for final server update for job 6530730108 in state='finished'
[2025-02-25 15:19:37] 2025-02-25 20:19:13,378 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-02-25 15:19:37] 2025-02-25 20:19:13,378 | INFO     | this job has now completed (state=finished)
[2025-02-25 15:19:37] 2025-02-25 20:19:13,378 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 15:19:37] 2025-02-25 20:19:13,379 | INFO     | log transfer has been attempted: DONE
[2025-02-25 15:19:37] 2025-02-25 20:19:13,379 | INFO     | job 6530730108 has finished - writing final server update
[2025-02-25 15:19:37] 2025-02-25 20:19:13,379 | INFO     | total number of processed events: 400 (read)
[2025-02-25 15:19:37] 2025-02-25 20:19:13,380 | INFO     | executing command: lscpu
[2025-02-25 15:19:37] 2025-02-25 20:19:13,406 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 15:19:37] 2025-02-25 20:19:13,419 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 15:19:37] 2025-02-25 20:19:14,126 | INFO     | PID=9322 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-02-25 15:19:37] 2025-02-25 20:19:18,166 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 15:19:37] 2025-02-25 20:19:18,166 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530730108/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 15:19:37] 2025-02-25 20:19:18,171 | INFO     | extracted standard info from prmon json
[2025-02-25 15:19:37] 2025-02-25 20:19:18,172 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 15:19:37] 2025-02-25 20:19:18,172 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 15:19:37] 2025-02-25 20:19:18,172 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 15:19:37] 2025-02-25 20:19:18,173 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 15:19:37] 2025-02-25 20:19:18,175 | INFO     | fitting pss+swap vs Time
[2025-02-25 15:19:37] 2025-02-25 20:19:18,175 | INFO     | model: linear, x: [1740510165.0, 1740510226.0, 1740510287.0, 1740510348.0, 1740510409.0, 1740510470.0, 1740510531.0, 1740510592.0, 1740510653.0, 1740510714.0, 1740
[2025-02-25 15:19:37] 2025-02-25 20:19:18,175 | INFO     | sum of square deviations: 125630262.5
[2025-02-25 15:19:37] 2025-02-25 20:19:18,176 | INFO     | sum of deviations: 27229640549.999996
[2025-02-25 15:19:37] 2025-02-25 20:19:18,176 | INFO     | mean x: 1740512391.5
[2025-02-25 15:19:37] 2025-02-25 20:19:18,176 | INFO     | mean y: 2521710.5675675673
[2025-02-25 15:19:37] 2025-02-25 20:19:18,177 | INFO     | -- intersect: -377243580066.5888
[2025-02-25 15:19:37] 2025-02-25 20:19:18,177 | INFO     | intersect: -377243580066.5888
[2025-02-25 15:19:37] 2025-02-25 20:19:18,177 | INFO     | chi2: 1.9592509207722444
[2025-02-25 15:19:37] 2025-02-25 20:19:18,177 | INFO     | -- intersect: -377243580066.5888
[2025-02-25 15:19:37] 2025-02-25 20:19:18,177 | INFO     | current memory leak: 216.74 B/s (using 74 data points, chi2=1.96)
[2025-02-25 15:19:37] 2025-02-25 20:19:18,178 | INFO     | ..............................
[2025-02-25 15:19:37] 2025-02-25 20:19:18,178 | INFO     | . Timing measurements:
[2025-02-25 15:19:37] 2025-02-25 20:19:18,178 | INFO     | . get job = 0 s
[2025-02-25 15:19:37] 2025-02-25 20:19:18,178 | INFO     | . initial setup = 2 s
[2025-02-25 15:19:37] 2025-02-25 20:19:18,178 | INFO     | . payload setup = 7 s
[2025-02-25 15:19:37] 2025-02-25 20:19:18,178 | INFO     | . stage-in = 0 s
[2025-02-25 15:19:37] 2025-02-25 20:19:18,178 | INFO     | . payload execution = 4894 s
[2025-02-25 15:19:37] 2025-02-25 20:19:18,179 | INFO     | . stage-out = 0 s
[2025-02-25 15:19:37] 2025-02-25 20:19:18,179 | INFO     | . log creation = 0 s
[2025-02-25 15:19:37] 2025-02-25 20:19:18,179 | INFO     | ..............................
[2025-02-25 15:19:37] 2025-02-25 20:19:18,259 | WARNING  | process 15690 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 15:19:37] 2025-02-25 20:19:18,263 | INFO     | 
[2025-02-25 15:19:37] 2025-02-25 20:19:18,264 | INFO     | job summary report
[2025-02-25 15:19:37] 2025-02-25 20:19:18,264 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530730108/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 15:19:37] 2025-02-25 20:19:18,264 | INFO     | --------------------------------------------------
[2025-02-25 15:19:37] 2025-02-25 20:19:18,264 | INFO     | PanDA job id: 6530730108
[2025-02-25 15:19:37] 2025-02-25 20:19:18,265 | INFO     | task id: 43401163
[2025-02-25 15:19:37] 2025-02-25 20:19:18,265 | INFO     | errors: (none)
[2025-02-25 15:19:37] 2025-02-25 20:19:18,265 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 15:19:37] 2025-02-25 20:19:18,265 | INFO     | pilot state: finished 
[2025-02-25 15:19:37] 2025-02-25 20:19:18,265 | INFO     | transexitcode: 0
[2025-02-25 15:19:37] 2025-02-25 20:19:18,266 | INFO     | exeerrorcode: 0
[2025-02-25 15:19:37] 2025-02-25 20:19:18,266 | INFO     | exeerrordiag: 
[2025-02-25 15:19:37] 2025-02-25 20:19:18,267 | INFO     | exitcode: 0
[2025-02-25 15:19:37] 2025-02-25 20:19:18,267 | INFO     | exitmsg: OK
[2025-02-25 15:19:37] 2025-02-25 20:19:18,267 | INFO     | cpuconsumptiontime: 46239 s
[2025-02-25 15:19:37] 2025-02-25 20:19:18,267 | INFO     | nevents: 400
[2025-02-25 15:19:37] 2025-02-25 20:19:18,270 | INFO     | neventsw: 0
[2025-02-25 15:19:37] 2025-02-25 20:19:18,271 | INFO     | pid: 15690
[2025-02-25 15:19:37] 2025-02-25 20:19:18,271 | INFO     | pgrp: 15690
[2025-02-25 15:19:37] 2025-02-25 20:19:18,271 | INFO     | corecount: 12
[2025-02-25 15:19:37] 2025-02-25 20:19:18,271 | INFO     | event service: False
[2025-02-25 15:19:37] 2025-02-25 20:19:18,272 | INFO     | sizes: {0: 2376770, 1: 2376969, 6: 2377175, 11: 2377203, 4905: 2403257, 4906: 2412382, 4911: 2412496}
[2025-02-25 15:19:37] 2025-02-25 20:19:18,272 | INFO     | --------------------------------------------------
[2025-02-25 15:19:37] 2025-02-25 20:19:18,272 | INFO     | 
[2025-02-25 15:19:37] 2025-02-25 20:19:18,272 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 15:19:37] 2025-02-25 20:19:18,296 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 15:19:37] 2025-02-25 20:19:18,296 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 15:19:37] 2025-02-25 20:19:18,297 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 15:19:37] 2025-02-25 20:19:18,297 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 15:19:37] 2025-02-25 20:19:18,297 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 15:19:37] 2025-02-25 20:19:18,297 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 15:19:37] 2025-02-25 20:19:18,297 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 15:19:37] 2025-02-25 20:19:18,297 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 15:19:37] 2025-02-25 20:19:18,298 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 15:19:37] 2025-02-25 20:19:18,298 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 15:19:37] 2025-02-25 20:19:18,298 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 15:19:37] 2025-02-25 20:19:18,298 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 15:19:37] 2025-02-25 20:19:18,298 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 15:19:37] 2025-02-25 20:19:18,298 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 15:19:37] 2025-02-25 20:19:18,299 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 15:19:37] 2025-02-25 20:19:18,299 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 15:19:37] 2025-02-25 20:19:18,299 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 15:19:37] 2025-02-25 20:19:18,299 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 15:19:37] 2025-02-25 20:19:18,299 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 15:19:37] 2025-02-25 20:19:18,299 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 15:19:37] 2025-02-25 20:19:18,300 | INFO     | job 6530730108 has completed (purged errors)
[2025-02-25 15:19:37] 2025-02-25 20:19:18,300 | INFO     | overall cleanup function is called
[2025-02-25 15:19:37] 2025-02-25 20:19:18,329 | INFO     | number of running child processes to parent process 15690: 1
[2025-02-25 15:19:37] 2025-02-25 20:19:18,329 | INFO     | maximum number of monitored processes: 6
[2025-02-25 15:19:37] 2025-02-25 20:19:18,329 | INFO     | aborting job monitoring since job object (job id=6530730108) has expired
[2025-02-25 15:19:37] 2025-02-25 20:19:19,304 | INFO     | --- collectZombieJob: --- 10, [15690]
[2025-02-25 15:19:37] 2025-02-25 20:19:19,304 | INFO     | zombie collector waiting for pid 15690
[2025-02-25 15:19:37] 2025-02-25 20:19:19,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 15:19:37] 2025-02-25 20:19:19,304 | INFO     | collected zombie processes
[2025-02-25 15:19:37] 2025-02-25 20:19:19,304 | INFO     | will attempt to kill all subprocesses of pid=15690
[2025-02-25 15:19:37] 2025-02-25 20:19:19,366 | INFO     | process IDs to be killed: [15690] (in reverse order)
[2025-02-25 15:19:37] 2025-02-25 20:19:19,413 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 15:19:37] 2025-02-25 20:19:19,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 15:19:37] 2025-02-25 20:19:19,417 | INFO     | did not find any defunct processes belonging to 15690
[2025-02-25 15:19:37] 2025-02-25 20:19:19,420 | INFO     | did not find any defunct processes belonging to 15690
[2025-02-25 15:19:37] 2025-02-25 20:19:19,420 | INFO     | ready for new job
[2025-02-25 15:19:37] 2025-02-25 20:19:19,420 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 15:19:37] 2025-02-25 20:19:19,421 | INFO     | **************************************
[2025-02-25 15:19:37] 2025-02-25 20:19:19,421 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 15:19:37] 2025-02-25 20:19:19,421 | INFO     | **************************************
[2025-02-25 15:19:37] 2025-02-25 20:19:19,421 | INFO     | 
[2025-02-25 15:19:37] 2025-02-25 20:19:19,422 | INFO     | architecture information:
[2025-02-25 15:19:37] 2025-02-25 20:19:19,422 | INFO     | executing command: cat /etc/os-release
[2025-02-25 15:19:37] 2025-02-25 20:19:19,436 | INFO     | cat /etc/os-release:
[2025-02-25 15:19:37] NAME="CentOS Linux"
[2025-02-25 15:19:37] VERSION="7 (Core)"
[2025-02-25 15:19:37] ID="centos"
[2025-02-25 15:19:37] ID_LIKE="rhel fedora"
[2025-02-25 15:19:37] VERSION_ID="7"
[2025-02-25 15:19:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 15:19:37] ANSI_COLOR="0;31"
[2025-02-25 15:19:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 15:19:37] HOME_URL="https://www.centos.org/"
[2025-02-25 15:19:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 15:19:37] 
[2025-02-25 15:19:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 15:19:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 15:19:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 15:19:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 15:19:37] 
[2025-02-25 15:19:37] 2025-02-25 20:19:19,436 | INFO     | **************************************
[2025-02-25 15:19:37] 2025-02-25 20:19:19,939 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 15:19:37] 2025-02-25 20:19:19,955 | INFO     | sufficient remaining disk space (29360128000 B)
[2025-02-25 15:19:37] 2025-02-25 20:19:19,955 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 15:19:37] 2025-02-25 20:19:19,955 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 15:19:37] 2025-02-25 20:19:19,956 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 15:19:37] 2025-02-25 20:19:19,956 | INFO     | aborting loop
[2025-02-25 15:19:37] 2025-02-25 20:19:19,956 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 15:19:37] 2025-02-25 20:19:20,143 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 15:19:37] 2025-02-25 20:19:20,143 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 15:19:37] 2025-02-25 20:19:20,143 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 15:19:37] 2025-02-25 20:19:20,474 | INFO     | all data control threads have been joined
[2025-02-25 15:19:37] 2025-02-25 20:19:20,689 | INFO     | all payload control threads have been joined
[2025-02-25 15:19:37] 2025-02-25 20:19:20,843 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 15:19:37] 2025-02-25 20:19:20,961 | INFO     | [job] retrieve thread has finished
[2025-02-25 15:19:37] 2025-02-25 20:19:20,962 | INFO     | [job] job monitor thread has finished
[2025-02-25 15:19:37] 2025-02-25 20:19:20,962 | INFO     | [job] queue monitor thread has finished
[2025-02-25 15:19:37] 2025-02-25 20:19:20,977 | INFO     | all job control threads have been joined
[2025-02-25 15:19:37] 2025-02-25 20:19:20,991 | INFO     | [payload] validate_post thread has finished
[2025-02-25 15:19:37] 2025-02-25 20:19:21,315 | INFO     | [job] validate thread has finished
[2025-02-25 15:19:37] 2025-02-25 20:19:21,479 | INFO     | [data] control thread has finished
[2025-02-25 15:19:37] 2025-02-25 20:19:21,598 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 15:19:37] 2025-02-25 20:19:21,602 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 15:19:37] 2025-02-25 20:19:21,694 | INFO     | [payload] control thread has finished
[2025-02-25 15:19:37] 2025-02-25 20:19:21,865 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 15:19:37] 2025-02-25 20:19:21,982 | INFO     | [job] control thread has finished
[2025-02-25 15:19:37] 2025-02-25 20:19:22,010 | INFO     | [payload] failed_post thread has finished
[2025-02-25 15:19:37] 2025-02-25 20:19:22,380 | INFO     | [data] copytool_in thread has finished
[2025-02-25 15:19:37] 2025-02-25 20:19:22,848 | INFO     | [data] copytool_out thread has finished
[2025-02-25 15:19:37] 2025-02-25 20:19:23,421 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 15:19:37] 2025-02-25 20:19:27,427 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 15:19:37] 2025-02-25 20:19:30,665 | INFO     | job.realtimelogging is not enabled
[2025-02-25 15:19:37] 2025-02-25 20:19:31,668 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 15:19:37] 2025-02-25 20:19:31,757 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140718880196416)>', '<ExcThread(monitor, started 140718194538240)>']
[2025-02-25 15:19:37] 2025-02-25 20:19:32,203 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 15:19:37] 2025-02-25 20:19:32,203 | INFO     | [monitor] control thread has ended
[2025-02-25 15:19:37] 2025-02-25 20:19:36,761 | INFO     | all workflow threads have been joined
[2025-02-25 15:19:37] 2025-02-25 20:19:36,761 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 15:19:37] 2025-02-25 20:19:36,761 | INFO     | traces error code: 0
[2025-02-25 15:19:37] 2025-02-25 20:19:36,764 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 15:19:37] 2025-02-25 20:19:36,861 [wrapper] ==== pilot stdout END ====
[2025-02-25 15:19:37] 2025-02-25 20:19:36,865 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 15:19:37] 2025-02-25 20:19:36,869 [wrapper] pilotpid: 9322
[2025-02-25 15:19:37] 2025-02-25 20:19:36,873 [wrapper] Pilot exit status: 0
[2025-02-25 15:19:37] 2025-02-25 20:19:36,889 [wrapper] pandaids: 6530730108
[2025-02-25 15:19:37] 2025-02-25 20:19:36,932 [wrapper] cleanup supervisor_pilot  6219 9323
[2025-02-25 15:19:37] 2025-02-25 20:19:36,936 [wrapper] Test setup, not cleaning
[2025-02-25 15:19:37] 2025-02-25 20:19:36,944 [wrapper] apfmon messages muted
[2025-02-25 15:19:37] 2025-02-25 20:19:36,948 [wrapper] ==== wrapper stdout END ====
[2025-02-25 15:19:37] 2025-02-25 20:19:36,952 [wrapper] ==== wrapper stderr END ====
[2025-02-25 15:19:37]  *** Error codes and diagnostics ***
[2025-02-25 15:19:37]     "exeErrorCode": 0,
[2025-02-25 15:19:37]     "exeErrorDiag": "",
[2025-02-25 15:19:37]     "pilotErrorCode": 0,
[2025-02-25 15:19:37]     "pilotErrorDiag": "",
[2025-02-25 15:19:37]  *** Listing of results directory ***
[2025-02-25 15:19:37] total 433972
[2025-02-25 15:19:37] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 13:15 pilot3.tar.gz
[2025-02-25 15:19:37] -rwx------ 1 boincer umatlas     35865 Feb 25 13:31 runpilot2-wrapper.sh
[2025-02-25 15:19:37] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 13:31 queuedata.json
[2025-02-25 15:19:37] -rw-r--r-- 1 boincer umatlas       100 Feb 25 13:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 15:19:37] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 13:56 run_atlas
[2025-02-25 15:19:37] -rw-r--r-- 1 boincer umatlas       105 Feb 25 13:56 job.xml
[2025-02-25 15:19:37] -rw-r--r-- 2 boincer umatlas 252633646 Feb 25 13:56 EVNT.43401161._000070.pool.root.1
[2025-02-25 15:19:37] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 13:56 start_atlas.sh
[2025-02-25 15:19:37] drwxrwx--x 2 boincer umatlas      4096 Feb 25 13:56 shared
[2025-02-25 15:19:37] -rw-r--r-- 2 boincer umatlas    503550 Feb 25 13:56 input.tar.gz
[2025-02-25 15:19:37] -rw-r--r-- 1 boincer umatlas         0 Feb 25 13:56 boinc_lockfile
[2025-02-25 15:19:37] -rw-r--r-- 1 boincer umatlas      2540 Feb 25 13:56 pandaJob.out
[2025-02-25 15:19:37] -rw------- 1 boincer umatlas       424 Feb 25 13:56 setup.sh.local
[2025-02-25 15:19:37] -rw------- 1 boincer umatlas    988266 Feb 25 13:57 agis_schedconf.cvmfs.json
[2025-02-25 15:19:37] -rw------- 1 boincer umatlas   1577983 Feb 25 13:57 agis_ddmendpoints.agis.ALL.json
[2025-02-25 15:19:37] drwx------ 4 boincer umatlas      4096 Feb 25 13:57 pilot3
[2025-02-25 15:19:37] -rw-r--r-- 1 boincer umatlas      5867 Feb 25 15:09 init_data.xml
[2025-02-25 15:19:37] -rw------- 1 boincer umatlas 186326264 Feb 25 15:18 HITS.43401163._001739.pool.root.1
[2025-02-25 15:19:37] -rw-r--r-- 1 boincer umatlas       529 Feb 25 15:18 boinc_task_state.xml
[2025-02-25 15:19:37] -rw------- 1 boincer umatlas      1044 Feb 25 15:19 memory_monitor_summary.json
[2025-02-25 15:19:37] -rw------- 1 boincer umatlas        95 Feb 25 15:19 pilot_heartbeat.json
[2025-02-25 15:19:37] -rw------- 1 boincer umatlas    353068 Feb 25 15:19 log.43401163._001739.job.log.tgz.1
[2025-02-25 15:19:37] -rw------- 1 boincer umatlas      7758 Feb 25 15:19 heartbeat.json
[2025-02-25 15:19:37] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 15:19 boinc_mmap_file
[2025-02-25 15:19:37] -rw-r--r-- 1 boincer umatlas        27 Feb 25 15:19 wrapper_checkpoint.txt
[2025-02-25 15:19:37] -rw------- 1 boincer umatlas      4287 Feb 25 15:19 pilotlog.txt
[2025-02-25 15:19:37] -rw------- 1 boincer umatlas    460767 Feb 25 15:19 log.43401163._001739.job.log.1
[2025-02-25 15:19:37] -rw------- 1 boincer umatlas       357 Feb 25 15:19 output.list
[2025-02-25 15:19:37] -rw-r--r-- 1 boincer umatlas       620 Feb 25 15:19 runtime_log
[2025-02-25 15:19:37] -rw------- 1 boincer umatlas    829440 Feb 25 15:19 result.tar.gz
[2025-02-25 15:19:37] -rw------- 1 boincer umatlas       658 Feb 25 15:19 Yr1NDmGtE76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmb0wKDmGWVE9m.diag
[2025-02-25 15:19:37] -rw-r--r-- 1 boincer umatlas     11015 Feb 25 15:19 runtime_log.err
[2025-02-25 15:19:37] -rw-r--r-- 1 boincer umatlas     21554 Feb 25 15:19 stderr.txt
[2025-02-25 15:19:37] HITS file was successfully produced:
[2025-02-25 15:19:37] -rw------- 1 boincer umatlas 186326264 Feb 25 15:18 shared/HITS.pool.root.1
[2025-02-25 15:19:37]  *** Contents of shared directory: ***
[2025-02-25 15:19:37] total 430004
[2025-02-25 15:19:37] -rw-r--r-- 2 boincer umatlas 252633646 Feb 25 13:56 ATLAS.root_0
[2025-02-25 15:19:37] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 13:56 start_atlas.sh
[2025-02-25 15:19:37] -rw-r--r-- 2 boincer umatlas    503550 Feb 25 13:56 input.tar.gz
[2025-02-25 15:19:37] -rw------- 1 boincer umatlas 186326264 Feb 25 15:18 HITS.pool.root.1
[2025-02-25 15:19:37] -rw------- 1 boincer umatlas    829440 Feb 25 15:19 result.tar.gz
15:19:38 (5015): run_atlas exited; CPU time 46173.648080
15:19:38 (5015): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN