Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:28:41 (1322440): wrapper (7.7.26015): starting
13:28:41 (1322440): wrapper: running run_atlas (--nthreads 10)
[2025-02-25 13:28:41] Arguments: --nthreads 10
[2025-02-25 13:28:41] Threads: 10
[2025-02-25 13:28:41] Checking for CVMFS
[2025-02-25 13:28:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 13:28:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 13:28:42] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 13:28:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 13:28:43] 2.11.5.0 1988508 78555 268900 143048 1 63 16505430 37641216 16887 130560 0 577858 95.915 5286304 29223 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 13:28:43] CVMFS is ok
[2025-02-25 13:28:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 13:28:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 13:28:43] Further information can be found at the LHC@home message board.
[2025-02-25 13:28:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 13:28:43] Checking for apptainer binary...
[2025-02-25 13:28:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 13:28:43] Running /usr/bin/apptainer --version
[2025-02-25 13:28:43] apptainer version 1.3.6-1.el9
[2025-02-25 13:28:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 13:28:43] c-5-1.aglt2.org
[2025-02-25 13:28:43] apptainer works
[2025-02-25 13:28:44] Set ATHENA_PROC_NUMBER=10
[2025-02-25 13:28:44] Set ATHENA_CORE_NUMBER=10
[2025-02-25 13:28:44] Starting ATLAS job with PandaID=6530729149
[2025-02-25 13:28:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 17:16:13]  *** The last 200 lines of the pilot log: ***
[2025-02-25 17:16:13] 2025-02-25 22:15:59,245 | INFO     | chi2: 5.304059315418269
[2025-02-25 17:16:13] 2025-02-25 22:15:59,246 | INFO     | model: linear, x: [1740508193.0, 1740508254.0, 1740508315.0, 1740508376.0, 1740508437.0, 1740508498.0, 1740508559.0, 1740508620.0, 1740508681.0, 1740508742.0, 1740
[2025-02-25 17:16:13] 2025-02-25 22:15:59,246 | INFO     | sum of square deviations: 3212248527.339445
[2025-02-25 17:16:13] 2025-02-25 22:15:59,248 | INFO     | sum of deviations: 81082504051.45871
[2025-02-25 17:16:13] 2025-02-25 22:15:59,248 | INFO     | mean x: 1740514811.9449542
[2025-02-25 17:16:13] 2025-02-25 22:15:59,248 | INFO     | mean y: 2198521.371559633
[2025-02-25 17:16:13] 2025-02-25 22:15:59,248 | INFO     | -- intersect: -43931294821.38611
[2025-02-25 17:16:13] 2025-02-25 22:15:59,248 | INFO     | intersect: -43931294821.38611
[2025-02-25 17:16:13] 2025-02-25 22:15:59,248 | INFO     | chi2: 4.658130549394509
[2025-02-25 17:16:13] 2025-02-25 22:15:59,249 | INFO     | current chi2=4.658130549394509 (change=12.17800796733403 %)
[2025-02-25 17:16:13] 2025-02-25 22:15:59,249 | INFO     | right removable region: 217
[2025-02-25 17:16:13] 2025-02-25 22:15:59,249 | INFO     | model: linear, x: [1740508498.0, 1740508559.0, 1740508620.0, 1740508681.0, 1740508742.0, 1740508803.0, 1740508864.0, 1740508925.0, 1740508986.0, 1740509047.0, 1740
[2025-02-25 17:16:13] 2025-02-25 22:15:59,250 | INFO     | sum of square deviations: 3212189357.339445
[2025-02-25 17:16:13] 2025-02-25 22:15:59,252 | INFO     | sum of deviations: 22185249574.293587
[2025-02-25 17:16:13] 2025-02-25 22:15:59,252 | INFO     | mean x: 1740515116.9449542
[2025-02-25 17:16:13] 2025-02-25 22:15:59,252 | INFO     | mean y: 2223608.357798165
[2025-02-25 17:16:13] 2025-02-25 22:15:59,252 | INFO     | -- intersect: -12018786974.043594
[2025-02-25 17:16:13] 2025-02-25 22:15:59,253 | INFO     | intersect: -12018786974.043594
[2025-02-25 17:16:13] 2025-02-25 22:15:59,253 | INFO     | chi2: 2.8341420118479137
[2025-02-25 17:16:13] 2025-02-25 22:15:59,253 | INFO     | current chi2=2.8341420118479137 (change=46.56654755708708 %)
[2025-02-25 17:16:13] 2025-02-25 22:15:59,253 | INFO     | model: linear, x: [1740508803.0, 1740508864.0, 1740508925.0, 1740508986.0, 1740509047.0, 1740509109.0, 1740509169.0, 1740509230.0, 1740509291.0, 1740509353.0, 1740
[2025-02-25 17:16:13] 2025-02-25 22:15:59,254 | INFO     | sum of square deviations: 2996146418.826312
[2025-02-25 17:16:13] 2025-02-25 22:15:59,255 | INFO     | sum of deviations: -8912473676.94836
[2025-02-25 17:16:13] 2025-02-25 22:15:59,255 | INFO     | mean x: 1740515269.455399
[2025-02-25 17:16:13] 2025-02-25 22:15:59,255 | INFO     | mean y: 2245563.215962441
[2025-02-25 17:16:13] 2025-02-25 22:15:59,255 | INFO     | -- intersect: 5179661601.990396
[2025-02-25 17:16:13] 2025-02-25 22:15:59,256 | INFO     | intersect: 5179661601.990396
[2025-02-25 17:16:13] 2025-02-25 22:15:59,256 | INFO     | chi2: 1.86167616402104
[2025-02-25 17:16:13] 2025-02-25 22:15:59,256 | INFO     | current chi2=1.86167616402104 (change=34.31253069752873 %)
[2025-02-25 17:16:13] 2025-02-25 22:15:59,256 | INFO     | model: linear, x: [1740509109.0, 1740509169.0, 1740509230.0, 1740509291.0, 1740509353.0, 1740509413.0, 1740509475.0, 1740509535.0, 1740509597.0, 1740509657.0, 1740
[2025-02-25 17:16:13] 2025-02-25 22:15:59,257 | INFO     | sum of square deviations: 2790010642.7644095
[2025-02-25 17:16:13] 2025-02-25 22:15:59,258 | INFO     | sum of deviations: -35296012282.10097
[2025-02-25 17:16:13] 2025-02-25 22:15:59,258 | INFO     | mean x: 1740515421.9663463
[2025-02-25 17:16:13] 2025-02-25 22:15:59,258 | INFO     | mean y: 2265023.985576923
[2025-02-25 17:16:13] 2025-02-25 22:15:59,259 | INFO     | -- intersect: 22021268381.636127
[2025-02-25 17:16:13] 2025-02-25 22:15:59,259 | INFO     | intersect: 22021268381.636127
[2025-02-25 17:16:13] 2025-02-25 22:15:59,259 | INFO     | chi2: 1.0907807488723325
[2025-02-25 17:16:13] 2025-02-25 22:15:59,259 | INFO     | current chi2=1.0907807488723325 (change=41.4086740780764 %)
[2025-02-25 17:16:13] 2025-02-25 22:15:59,259 | INFO     | model: linear, x: [1740509413.0, 1740509475.0, 1740509535.0, 1740509597.0, 1740509657.0, 1740509718.0, 1740509779.0, 1740509841.0, 1740509902.0, 1740509962.0, 1740
[2025-02-25 17:16:13] 2025-02-25 22:15:59,260 | INFO     | sum of square deviations: 2593574842.5418615
[2025-02-25 17:16:13] 2025-02-25 22:15:59,261 | INFO     | sum of deviations: -35762737465.38425
[2025-02-25 17:16:13] 2025-02-25 22:15:59,261 | INFO     | mean x: 1740515574.4679804
[2025-02-25 17:16:13] 2025-02-25 22:15:59,261 | INFO     | mean y: 2265348.9408866996
[2025-02-25 17:16:13] 2025-02-25 22:15:59,261 | INFO     | -- intersect: 24002190287.720116
[2025-02-25 17:16:13] 2025-02-25 22:15:59,262 | INFO     | intersect: 24002190287.720116
[2025-02-25 17:16:13] 2025-02-25 22:15:59,262 | INFO     | chi2: 1.0699298481190036
[2025-02-25 17:16:13] 2025-02-25 22:15:59,263 | INFO     | current chi2=1.0699298481190036 (change=1.9115574578012 %)
[2025-02-25 17:16:13] 2025-02-25 22:15:59,263 | INFO     | left removable region: 40
[2025-02-25 17:16:13] 2025-02-25 22:15:59,263 | INFO     | model: linear, x: [1740510634.0, 1740510696.0, 1740510755.0, 1740510816.0, 1740510877.0, 1740510938.0, 1740511000.0, 1740511060.0, 1740511121.0, 1740511182.0, 1740
[2025-02-25 17:16:13] 2025-02-25 22:15:59,263 | INFO     | sum of square deviations: 1719149699.932199
[2025-02-25 17:16:13] 2025-02-25 22:15:59,264 | INFO     | sum of deviations: 5784435598.0339
[2025-02-25 17:16:13] 2025-02-25 22:15:59,265 | INFO     | mean x: 1740516001.457627
[2025-02-25 17:16:13] 2025-02-25 22:15:59,265 | INFO     | mean y: 2248445.604519774
[2025-02-25 17:16:13] 2025-02-25 22:15:59,265 | INFO     | -- intersect: -5854078503.803194
[2025-02-25 17:16:13] 2025-02-25 22:15:59,265 | INFO     | intersect: -5854078503.803194
[2025-02-25 17:16:13] 2025-02-25 22:15:59,265 | INFO     | chi2: 0.07903225276306768
[2025-02-25 17:16:13] 2025-02-25 22:15:59,266 | INFO     | -- intersect: -5854078503.803194
[2025-02-25 17:16:13] 2025-02-25 22:15:59,266 | INFO     | current memory leak: 3.36 B/s (using 177 data points, chi2=0.08)
[2025-02-25 17:16:13] 2025-02-25 22:15:59,267 | INFO     | ..............................
[2025-02-25 17:16:13] 2025-02-25 22:15:59,267 | INFO     | . Timing measurements:
[2025-02-25 17:16:13] 2025-02-25 22:15:59,267 | INFO     | . get job = 0 s
[2025-02-25 17:16:13] 2025-02-25 22:15:59,267 | INFO     | . initial setup = 4 s
[2025-02-25 17:16:13] 2025-02-25 22:15:59,267 | INFO     | . payload setup = 14 s
[2025-02-25 17:16:13] 2025-02-25 22:15:59,267 | INFO     | . stage-in = 0 s
[2025-02-25 17:16:13] 2025-02-25 22:15:59,267 | INFO     | . payload execution = 13556 s
[2025-02-25 17:16:13] 2025-02-25 22:15:59,267 | INFO     | . stage-out = 3 s
[2025-02-25 17:16:13] 2025-02-25 22:15:59,267 | INFO     | . log creation = 0 s
[2025-02-25 17:16:13] 2025-02-25 22:15:59,268 | INFO     | ..............................
[2025-02-25 17:16:13] 2025-02-25 22:15:59,612 | INFO     | 
[2025-02-25 17:16:13] 2025-02-25 22:15:59,612 | INFO     | job summary report
[2025-02-25 17:16:13] 2025-02-25 22:15:59,612 | INFO     | --------------------------------------------------
[2025-02-25 17:16:13] 2025-02-25 22:15:59,613 | INFO     | PanDA job id: 6530729149
[2025-02-25 17:16:13] 2025-02-25 22:15:59,613 | INFO     | task id: 43401163
[2025-02-25 17:16:13] 2025-02-25 22:15:59,613 | INFO     | errors: (none)
[2025-02-25 17:16:13] 2025-02-25 22:15:59,613 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 17:16:13] 2025-02-25 22:15:59,613 | INFO     | pilot state: finished 
[2025-02-25 17:16:13] 2025-02-25 22:15:59,613 | INFO     | transexitcode: 0
[2025-02-25 17:16:13] 2025-02-25 22:15:59,613 | INFO     | exeerrorcode: 0
[2025-02-25 17:16:13] 2025-02-25 22:15:59,613 | INFO     | exeerrordiag: 
[2025-02-25 17:16:13] 2025-02-25 22:15:59,613 | INFO     | exitcode: 0
[2025-02-25 17:16:13] 2025-02-25 22:15:59,613 | INFO     | exitmsg: OK
[2025-02-25 17:16:13] 2025-02-25 22:15:59,613 | INFO     | cpuconsumptiontime: 50075 s
[2025-02-25 17:16:13] 2025-02-25 22:15:59,613 | INFO     | nevents: 400
[2025-02-25 17:16:13] 2025-02-25 22:15:59,614 | INFO     | neventsw: 0
[2025-02-25 17:16:13] 2025-02-25 22:15:59,614 | INFO     | pid: 1335233
[2025-02-25 17:16:13] 2025-02-25 22:15:59,614 | INFO     | pgrp: 1335233
[2025-02-25 17:16:13] 2025-02-25 22:15:59,614 | INFO     | corecount: 10
[2025-02-25 17:16:13] 2025-02-25 22:15:59,614 | INFO     | event service: False
[2025-02-25 17:16:13] 2025-02-25 22:15:59,614 | INFO     | sizes: {0: 2376772, 1: 2376971, 9: 2377177, 12: 2377205, 13574: 2407683, 13578: 2417523, 13581: 2417707, 13593: 2417877}
[2025-02-25 17:16:13] 2025-02-25 22:15:59,614 | INFO     | --------------------------------------------------
[2025-02-25 17:16:13] 2025-02-25 22:15:59,614 | INFO     | 
[2025-02-25 17:16:13] 2025-02-25 22:15:59,614 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 17:16:13] 2025-02-25 22:15:59,816 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 17:16:13] 2025-02-25 22:15:59,816 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 17:16:13] 2025-02-25 22:15:59,816 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 17:16:13] 2025-02-25 22:15:59,816 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 17:16:13] 2025-02-25 22:15:59,816 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 17:16:13] 2025-02-25 22:15:59,817 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 17:16:13] 2025-02-25 22:15:59,817 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 17:16:13] 2025-02-25 22:15:59,817 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 17:16:13] 2025-02-25 22:15:59,817 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 17:16:13] 2025-02-25 22:15:59,817 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 17:16:13] 2025-02-25 22:15:59,817 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 17:16:13] 2025-02-25 22:15:59,817 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 17:16:13] 2025-02-25 22:15:59,817 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 17:16:13] 2025-02-25 22:15:59,817 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 17:16:13] 2025-02-25 22:15:59,818 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 17:16:13] 2025-02-25 22:15:59,818 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 17:16:13] 2025-02-25 22:15:59,818 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 17:16:13] 2025-02-25 22:15:59,818 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 17:16:13] 2025-02-25 22:15:59,818 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 17:16:13] 2025-02-25 22:15:59,818 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 17:16:13] 2025-02-25 22:15:59,818 | INFO     | job 6530729149 has completed (purged errors)
[2025-02-25 17:16:13] 2025-02-25 22:15:59,819 | INFO     | overall cleanup function is called
[2025-02-25 17:16:13] 2025-02-25 22:16:00,590 | INFO     | PID=1326567 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-02-25 17:16:13] 2025-02-25 22:16:00,590 | INFO     | .. there are 41 such processes running
[2025-02-25 17:16:13] 2025-02-25 22:16:00,872 | INFO     | --- collectZombieJob: --- 10, [1335233]
[2025-02-25 17:16:13] 2025-02-25 22:16:00,872 | INFO     | zombie collector waiting for pid 1335233
[2025-02-25 17:16:13] 2025-02-25 22:16:00,873 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 17:16:13] 2025-02-25 22:16:00,873 | INFO     | collected zombie processes
[2025-02-25 17:16:13] 2025-02-25 22:16:00,873 | INFO     | will attempt to kill all subprocesses of pid=1335233
[2025-02-25 17:16:13] 2025-02-25 22:16:01,189 | INFO     | process IDs to be killed: [1335233] (in reverse order)
[2025-02-25 17:16:13] 2025-02-25 22:16:01,334 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 17:16:13] 2025-02-25 22:16:01,334 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 17:16:13] 2025-02-25 22:16:01,379 | INFO     | did not find any defunct processes belonging to 1335233
[2025-02-25 17:16:13] 2025-02-25 22:16:01,441 | INFO     | did not find any defunct processes belonging to 1335233
[2025-02-25 17:16:13] 2025-02-25 22:16:01,441 | INFO     | ready for new job
[2025-02-25 17:16:13] 2025-02-25 22:16:01,441 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 17:16:13] 2025-02-25 22:16:01,443 | INFO     | **************************************
[2025-02-25 17:16:13] 2025-02-25 22:16:01,444 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 17:16:13] 2025-02-25 22:16:01,444 | INFO     | **************************************
[2025-02-25 17:16:13] 2025-02-25 22:16:01,444 | INFO     | 
[2025-02-25 17:16:13] 2025-02-25 22:16:01,460 | INFO     | architecture information:
[2025-02-25 17:16:13] 2025-02-25 22:16:01,464 | INFO     | executing command: cat /etc/os-release
[2025-02-25 17:16:13] 2025-02-25 22:16:01,491 | INFO     | cat /etc/os-release:
[2025-02-25 17:16:13] NAME="CentOS Linux"
[2025-02-25 17:16:13] VERSION="7 (Core)"
[2025-02-25 17:16:13] ID="centos"
[2025-02-25 17:16:13] ID_LIKE="rhel fedora"
[2025-02-25 17:16:13] VERSION_ID="7"
[2025-02-25 17:16:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 17:16:13] ANSI_COLOR="0;31"
[2025-02-25 17:16:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 17:16:13] HOME_URL="https://www.centos.org/"
[2025-02-25 17:16:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 17:16:13] 
[2025-02-25 17:16:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 17:16:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 17:16:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 17:16:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 17:16:13] 
[2025-02-25 17:16:13] 2025-02-25 22:16:01,492 | INFO     | **************************************
[2025-02-25 17:16:13] 2025-02-25 22:16:01,995 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 17:16:13] 2025-02-25 22:16:02,021 | INFO     | sufficient remaining disk space (75966185472 B)
[2025-02-25 17:16:13] 2025-02-25 22:16:02,022 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 17:16:13] 2025-02-25 22:16:02,022 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 17:16:13] 2025-02-25 22:16:02,022 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 17:16:13] 2025-02-25 22:16:02,022 | INFO     | aborting loop
[2025-02-25 17:16:13] 2025-02-25 22:16:02,169 | INFO     | all data control threads have been joined
[2025-02-25 17:16:13] 2025-02-25 22:16:02,179 | INFO     | all payload control threads have been joined
[2025-02-25 17:16:13] 2025-02-25 22:16:02,217 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 17:16:13] 2025-02-25 22:16:02,443 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 17:16:13] 2025-02-25 22:16:02,597 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 17:16:13] 2025-02-25 22:16:02,598 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 17:16:13] 2025-02-25 22:16:02,598 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 17:16:13] 2025-02-25 22:16:02,726 | INFO     | all job control threads have been joined
[2025-02-25 17:16:13] 2025-02-25 22:16:03,027 | INFO     | [job] retrieve thread has finished
[2025-02-25 17:16:13] 2025-02-25 22:16:03,035 | INFO     | [job] job monitor thread has finished
[2025-02-25 17:16:13] 2025-02-25 22:16:03,174 | INFO     | [data] control thread has finished
[2025-02-25 17:16:13] 2025-02-25 22:16:03,185 | INFO     | [payload] control thread has finished
[2025-02-25 17:16:13] 2025-02-25 22:16:03,451 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 17:16:13] 2025-02-25 22:16:03,534 | INFO     | [data] copytool_in thread has finished
[2025-02-25 17:16:13] 2025-02-25 22:16:03,536 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 17:16:13] 2025-02-25 22:16:03,732 | INFO     | [job] control thread has finished
[2025-02-25 17:16:13] 2025-02-25 22:16:04,050 | INFO     | [payload] failed_post thread has finished
[2025-02-25 17:16:13] 2025-02-25 22:16:04,064 | INFO     | [job] validate thread has finished
[2025-02-25 17:16:13] 2025-02-25 22:16:04,136 | INFO     | [payload] validate_post thread has finished
[2025-02-25 17:16:13] 2025-02-25 22:16:04,230 | INFO     | [data] copytool_out thread has finished
[2025-02-25 17:16:13] 2025-02-25 22:16:04,273 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 17:16:13] 2025-02-25 22:16:04,369 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 17:16:13] 2025-02-25 22:16:04,399 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 17:16:13] 2025-02-25 22:16:05,405 | INFO     | [job] queue monitor thread has finished
[2025-02-25 17:16:13] 2025-02-25 22:16:06,456 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 17:16:13] 2025-02-25 22:16:06,459 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140456282842944)>', '<ExcThread(monitor, started 140455941490432)>']
[2025-02-25 17:16:13] 2025-02-25 22:16:06,620 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 17:16:13] 2025-02-25 22:16:06,620 | INFO     | [monitor] control thread has ended
[2025-02-25 17:16:13] 2025-02-25 22:16:11,486 | INFO     | all workflow threads have been joined
[2025-02-25 17:16:13] 2025-02-25 22:16:11,486 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 17:16:13] 2025-02-25 22:16:11,487 | INFO     | traces error code: 0
[2025-02-25 17:16:13] 2025-02-25 22:16:11,487 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 17:16:13] 2025-02-25 22:16:11,865 [wrapper] ==== pilot stdout END ====
[2025-02-25 17:16:13] 2025-02-25 22:16:11,878 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 17:16:13] 2025-02-25 22:16:11,884 [wrapper] pilotpid: 1326567
[2025-02-25 17:16:13] 2025-02-25 22:16:11,886 [wrapper] Pilot exit status: 0
[2025-02-25 17:16:13] 2025-02-25 22:16:11,994 [wrapper] pandaids: 6530729149
[2025-02-25 17:16:13] 2025-02-25 22:16:12,196 [wrapper] cleanup supervisor_pilot 2543259 1326568
[2025-02-25 17:16:13] 2025-02-25 22:16:12,230 [wrapper] Test setup, not cleaning
[2025-02-25 17:16:13] 2025-02-25 22:16:12,393 [wrapper] apfmon messages muted
[2025-02-25 17:16:13] 2025-02-25 22:16:12,443 [wrapper] ==== wrapper stdout END ====
[2025-02-25 17:16:13] 2025-02-25 22:16:12,457 [wrapper] ==== wrapper stderr END ====
[2025-02-25 17:16:13]  *** Error codes and diagnostics ***
[2025-02-25 17:16:13]     "exeErrorCode": 0,
[2025-02-25 17:16:13]     "exeErrorDiag": "",
[2025-02-25 17:16:13]     "pilotErrorCode": 0,
[2025-02-25 17:16:13]     "pilotErrorDiag": "",
[2025-02-25 17:16:13]  *** Listing of results directory ***
[2025-02-25 17:16:13] total 431672
[2025-02-25 17:16:13] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 13:15 pilot3.tar.gz
[2025-02-25 17:16:13] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 13:26 queuedata.json
[2025-02-25 17:16:13] -rwx------. 1 boincer umatlas     35865 Feb 25 13:27 runpilot2-wrapper.sh
[2025-02-25 17:16:13] -rw-r--r--. 1 boincer umatlas       100 Feb 25 13:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 17:16:13] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 13:28 run_atlas
[2025-02-25 17:16:13] -rw-r--r--. 1 boincer umatlas       105 Feb 25 13:28 job.xml
[2025-02-25 17:16:13] -rw-r--r--. 2 boincer umatlas 251135456 Feb 25 13:28 EVNT.43401161._000051.pool.root.1
[2025-02-25 17:16:13] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 13:28 start_atlas.sh
[2025-02-25 17:16:13] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 13:28 shared
[2025-02-25 17:16:13] -rw-r--r--. 2 boincer umatlas    503549 Feb 25 13:28 input.tar.gz
[2025-02-25 17:16:13] -rw-r--r--. 1 boincer umatlas         0 Feb 25 13:28 boinc_lockfile
[2025-02-25 17:16:13] -rw-r--r--. 1 boincer umatlas      2541 Feb 25 13:28 pandaJob.out
[2025-02-25 17:16:13] -rw-------. 1 boincer umatlas       467 Feb 25 13:28 setup.sh.local
[2025-02-25 17:16:13] -rw-------. 1 boincer umatlas    988266 Feb 25 13:29 agis_schedconf.cvmfs.json
[2025-02-25 17:16:13] drwx------. 4 boincer umatlas      4096 Feb 25 13:29 pilot3
[2025-02-25 17:16:13] -rw-r--r--. 1 boincer umatlas      6673 Feb 25 17:13 init_data.xml
[2025-02-25 17:16:13] -rw-------. 1 boincer umatlas 183614473 Feb 25 17:14 HITS.43401163._001286.pool.root.1
[2025-02-25 17:16:13] -rw-r--r--. 1 boincer umatlas       531 Feb 25 17:15 boinc_task_state.xml
[2025-02-25 17:16:13] -rw-------. 1 boincer umatlas      1050 Feb 25 17:15 memory_monitor_summary.json
[2025-02-25 17:16:13] -rw-------. 1 boincer umatlas        95 Feb 25 17:15 pilot_heartbeat.json
[2025-02-25 17:16:13] -rw-------. 1 boincer umatlas   1573632 Feb 25 17:15 agis_ddmendpoints.agis.ALL.json
[2025-02-25 17:16:13] -rw-------. 1 boincer umatlas    444494 Feb 25 17:15 log.43401163._001286.job.log.tgz.1
[2025-02-25 17:16:13] -rw-------. 1 boincer umatlas      7741 Feb 25 17:15 heartbeat.json
[2025-02-25 17:16:13] -rw-------. 1 boincer umatlas      4215 Feb 25 17:16 pilotlog.txt
[2025-02-25 17:16:13] -rw-------. 1 boincer umatlas   1301673 Feb 25 17:16 log.43401163._001286.job.log.1
[2025-02-25 17:16:13] -rw-------. 1 boincer umatlas       357 Feb 25 17:16 output.list
[2025-02-25 17:16:13] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 17:16 boinc_mmap_file
[2025-02-25 17:16:13] -rw-r--r--. 1 boincer umatlas        28 Feb 25 17:16 wrapper_checkpoint.txt
[2025-02-25 17:16:13] -rw-r--r--. 1 boincer umatlas       620 Feb 25 17:16 runtime_log
[2025-02-25 17:16:13] -rw-------. 1 boincer umatlas   1761280 Feb 25 17:16 result.tar.gz
[2025-02-25 17:16:13] -rw-r--r--. 1 boincer umatlas     11406 Feb 25 17:16 runtime_log.err
[2025-02-25 17:16:13] -rw-------. 1 boincer umatlas       657 Feb 25 17:16 rnCLDmzpE76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmJwwKDmA6CYkn.diag
[2025-02-25 17:16:13] -rw-r--r--. 1 boincer umatlas     21715 Feb 25 17:16 stderr.txt
[2025-02-25 17:16:13] HITS file was successfully produced:
[2025-02-25 17:16:13] -rw-------. 1 boincer umatlas 183614473 Feb 25 17:14 shared/HITS.pool.root.1
[2025-02-25 17:16:13]  *** Contents of shared directory: ***
[2025-02-25 17:16:13] total 426800
[2025-02-25 17:16:13] -rw-r--r--. 2 boincer umatlas 251135456 Feb 25 13:28 ATLAS.root_0
[2025-02-25 17:16:13] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 13:28 start_atlas.sh
[2025-02-25 17:16:13] -rw-r--r--. 2 boincer umatlas    503549 Feb 25 13:28 input.tar.gz
[2025-02-25 17:16:13] -rw-------. 1 boincer umatlas 183614473 Feb 25 17:14 HITS.pool.root.1
[2025-02-25 17:16:13] -rw-------. 1 boincer umatlas   1761280 Feb 25 17:16 result.tar.gz
17:16:15 (1322440): run_atlas exited; CPU time 50113.798773
17:16:15 (1322440): called boinc_finish(0)

</stderr_txt>
]]>

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