Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-26 00:47:58 (70888): Detected: vboxwrapper 26206
2025-02-26 00:47:58 (70888): Detected: BOINC client v8.0.2
2025-02-26 00:47:58 (70888): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-02-26 00:47:59 (70888): Successfully copied 'init_data.xml' to the shared directory.
2025-02-26 00:47:59 (70888): Create VM. (boinc_9f6bda646fd72e77, slot#4)
2025-02-26 00:48:00 (70888): Setting Memory Size for VM. (4400MB)
2025-02-26 00:48:00 (70888): Setting CPU Count for VM. (4)
2025-02-26 00:48:00 (70888): Setting Chipset Options for VM.
2025-02-26 00:48:00 (70888): Setting Graphics Controller Options for VM.
2025-02-26 00:48:01 (70888): Setting Boot Options for VM.
2025-02-26 00:48:01 (70888): Setting Network Configuration for NAT.
2025-02-26 00:48:01 (70888): Enabling VM Network Access.
2025-02-26 00:48:01 (70888): Disabling USB Support for VM.
2025-02-26 00:48:02 (70888): Disabling COM Port Support for VM.
2025-02-26 00:48:02 (70888): Disabling LPT Port Support for VM.
2025-02-26 00:48:02 (70888): Disabling Audio Support for VM.
2025-02-26 00:48:02 (70888): Disabling Clipboard Support for VM.
2025-02-26 00:48:03 (70888): Disabling Drag and Drop Support for VM.
2025-02-26 00:48:03 (70888): Adding storage controller(s) to VM.
2025-02-26 00:48:03 (70888): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-26 00:48:04 (70888): Adding VirtualBox Guest Additions to VM.
2025-02-26 00:48:04 (70888): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-26 00:48:04 (70888): forwarding host port 56555 to guest port 80
2025-02-26 00:48:04 (70888): Enabling remote desktop for VM.
2025-02-26 00:48:05 (70888): Required extension pack not installed, remote desktop not enabled.
2025-02-26 00:48:05 (70888): Enabling shared directory for VM.
2025-02-26 00:48:05 (70888): Starting VM using VBoxManage interface. (boinc_9f6bda646fd72e77, slot#4)
2025-02-26 00:48:10 (70888): Successfully started VM. (PID = '54760')
2025-02-26 00:48:10 (70888): Reporting VM Process ID to BOINC.
2025-02-26 00:48:10 (70888): Guest Log: BIOS: VirtualBox 7.1.6
2025-02-26 00:48:10 (70888): Guest Log: CPUID EDX: 0x178bfbff
2025-02-26 00:48:10 (70888): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-26 00:48:10 (70888): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-26 00:48:10 (70888): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-26 00:48:10 (70888): Detected: Web Application Enabled (http://localhost:56555)
2025-02-26 00:48:10 (70888): Preference change detected
2025-02-26 00:48:10 (70888): Setting CPU throttle for VM. (100%)
2025-02-26 00:48:10 (70888): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-26 00:48:12 (70888): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-26 00:48:12 (70888): Guest Log: BIOS: Booting from Hard Disk...
2025-02-26 00:48:15 (70888): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-26 00:48:15 (70888): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-26 00:48:15 (70888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-26 00:48:17 (70888): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-26 00:48:17 (70888): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-26 00:48:20 (70888): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-26 00:48:20 (70888): Guest Log: 00:00:00.000112 main     Log opened 2025-02-26T00:48:19.416845000Z
2025-02-26 00:48:20 (70888): Guest Log: 00:00:00.000177 main     OS Product: Linux
2025-02-26 00:48:20 (70888): Guest Log: 00:00:00.000191 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-26 00:48:20 (70888): Guest Log: 00:00:00.000201 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-26 00:48:20 (70888): Guest Log: 00:00:00.000211 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-26 00:48:20 (70888): Guest Log: 00:00:00.000211 main     Process ID: 1311
2025-02-26 00:48:20 (70888): Guest Log: 00:00:00.000212 main     Package type: LINUX_64BITS_GENERIC
2025-02-26 00:48:20 (70888): Guest Log: 00:00:00.000750 main     5.2.32 r132073 started. Verbose level = 0
2025-02-26 00:48:20 (70888): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-26 00:48:20 (70888): Guest Log: [INFO] Mounting shared directory
2025-02-26 00:48:20 (70888): Guest Log: [INFO] Checking for init_data.xml
2025-02-26 00:48:26 (70888): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-26 00:48:26 (70888): Guest Log: [INFO] Detected branch: prod
2025-02-26 00:48:26 (70888): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-26 00:48:26 (70888): Guest Log: Copying input files
2025-02-26 00:48:27 (70888): Guest Log: Copied input files into RunAtlas.
2025-02-26 00:48:27 (70888): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-26 00:48:27 (70888): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-26 00:48:27 (70888): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-26 00:48:27 (70888): Guest Log: Further information can be found at the LHC@home message board.
2025-02-26 00:48:30 (70888): Guest Log: 00:00:10.016986 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 887 408 000ns (GuestNow=1 740 523 710 531 634 000 ns GuestLast=1 740 530 899 419 042 000 ns fSetTimeLastLoop=true )
2025-02-26 00:48:34 (70888): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-26 00:48:34 (70888): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-26 00:48:34 (70888): Guest Log: 2.6.3.0 1588 0 32224 143054 3 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-26 00:48:34 (70888): Guest Log: copied the webapp to /var/www
2025-02-26 00:48:34 (70888): Guest Log: ATHENA_PROC_NUMBER=4
2025-02-26 00:48:34 (70888): Guest Log: ATHENA_CORE_NUMBER=4
2025-02-26 00:48:34 (70888): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-26 00:48:34 (70888): Guest Log:  *** Starting ATLAS job. (PandaID=6522582895 taskID=43205094) ***
2025-02-26 02:28:13 (70888): Status Report: Elapsed Time: '6000.000000'
2025-02-26 02:28:13 (70888): Status Report: CPU Time: '20476.156250'
2025-02-26 04:08:15 (70888): Status Report: Elapsed Time: '12000.000000'
2025-02-26 04:08:15 (70888): Status Report: CPU Time: '44135.531250'
2025-02-26 04:44:31 (70888): Guest Log:  *** Job finished ***
2025-02-26 04:44:31 (70888): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-26 04:44:31 (70888): Guest Log: 2025-02-26 02:55:30,227 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-02-26 04:44:31 (70888): Guest Log: 2025-02-26 02:55:30,471 | INFO     | [data] copytool_in thread has finished
2025-02-26 04:44:31 (70888): Guest Log: 2025-02-26 02:55:34,269 | INFO     | [data] queue_monitor thread has finished
2025-02-26 04:44:31 (70888): Guest Log: 2025-02-26 02:55:34,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140578814240576)>', '<ExcThread(monitor, started 140578088015616)>']
2025-02-26 04:44:31 (70888): Guest Log: 2025-02-26 02:55:34,934 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-26 04:44:31 (70888): Guest Log: 2025-02-26 02:55:34,934 | INFO     | [monitor] control thread has ended
2025-02-26 04:44:31 (70888): Guest Log: 2025-02-26 02:55:39,965 | INFO     | all workflow threads have been joined
2025-02-26 04:44:31 (70888): Guest Log: 2025-02-26 02:55:39,965 | INFO     | end of generic workflow (traces error code: 0)
2025-02-26 04:44:31 (70888): Guest Log: 2025-02-26 02:55:39,965 | INFO     | traces error code: 0
2025-02-26 04:44:31 (70888): Guest Log: 2025-02-26 02:55:39,965 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-26 04:44:31 (70888): Guest Log: 2025-02-26 02:55:40,059 [wrapper] ==== pilot stdout END ====
2025-02-26 04:44:31 (70888): Guest Log: 2025-02-26 02:55:40,062 [wrapper] ==== wrapper stdout RESUME ====
2025-02-26 04:44:31 (70888): Guest Log: 2025-02-26 02:55:40,065 [wrapper] pilotpid: 5895
2025-02-26 04:44:31 (70888): Guest Log: 2025-02-26 02:55:40,068 [wrapper] Pilot exit status: 0
2025-02-26 04:44:31 (70888): Guest Log: 2025-02-26 02:55:40,137 [wrapper] pandaids: 6522582895
2025-02-26 04:44:31 (70888): Guest Log: 2025-02-26 02:55:40,163 [wrapper] cleanup supervisor_pilot 16907 5896
2025-02-26 04:44:31 (70888): Guest Log: 2025-02-26 02:55:40,167 [wrapper] Test setup, not cleaning
2025-02-26 04:44:31 (70888): Guest Log: 2025-02-26 02:55:40,175 [wrapper] apfmon messages muted
2025-02-26 04:44:31 (70888): Guest Log: 2025-02-26 02:55:40,180 [wrapper] ==== wrapper stdout END ====
2025-02-26 04:44:31 (70888): Guest Log: 2025-02-26 02:55:40,184 [wrapper] ==== wrapper stderr END ====
2025-02-26 04:44:31 (70888): Guest Log:  *** Error codes and diagnostics ***
2025-02-26 04:44:31 (70888): Guest Log:     "exeErrorCode": 0,
2025-02-26 04:44:31 (70888): Guest Log:     "exeErrorDiag": "",
2025-02-26 04:44:31 (70888): Guest Log:     "pilotErrorCode": 0,
2025-02-26 04:44:31 (70888): Guest Log:     "pilotErrorDiag": "",
2025-02-26 04:44:31 (70888): Guest Log:  *** Listing of results directory ***
2025-02-26 04:44:31 (70888): Guest Log: total 326644
2025-02-26 04:44:31 (70888): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 22 01:23 pilot3.tar.gz
2025-02-26 04:44:31 (70888): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 22 01:35 runpilot2-wrapper.sh
2025-02-26 04:44:31 (70888): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 22 01:35 queuedata.json
2025-02-26 04:44:31 (70888): Guest Log: -rwxr-xr-x. 1 atlas atlas     12026 Feb 25 22:48 init_data.xml
2025-02-26 04:44:31 (70888): Guest Log: -rwxr-xr-x. 1 atlas atlas    503548 Feb 25 22:48 input.tar.gz
2025-02-26 04:44:31 (70888): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 25 22:48 start_atlas.sh
2025-02-26 04:44:31 (70888): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 25 22:48 EVNT.43092757._002064.pool.root.1 -> /data/./ATLAS.root_0
2025-02-26 04:44:31 (70888): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Feb 25 22:48 pandaJob.out
2025-02-26 04:44:31 (70888): Guest Log: -rw-------. 1 atlas atlas       424 Feb 25 22:48 setup.sh.local
2025-02-26 04:44:31 (70888): Guest Log: -rw-------. 1 atlas atlas    987490 Feb 25 22:48 agis_schedconf.cvmfs.json
2025-02-26 04:44:31 (70888): Guest Log: drwx------. 4 atlas atlas      4096 Feb 25 22:49 pilot3
2025-02-26 04:44:31 (70888): Guest Log: -rw-------. 1 atlas atlas 327231822 Feb 26 02:54 HITS.43205094._034577.pool.root.1
2025-02-26 04:44:31 (70888): Guest Log: -rw-------. 1 atlas atlas        95 Feb 26 02:55 pilot_heartbeat.json
2025-02-26 04:44:31 (70888): Guest Log: -rw-------. 1 atlas atlas      1028 Feb 26 02:55 memory_monitor_summary.json
2025-02-26 04:44:31 (70888): Guest Log: -rw-------. 1 atlas atlas   1573632 Feb 26 02:55 agis_ddmendpoints.agis.ALL.json
2025-02-26 04:44:31 (70888): Guest Log: -rw-------. 1 atlas atlas    345135 Feb 26 02:55 log.43205094._034577.job.log.tgz.1
2025-02-26 04:44:31 (70888): Guest Log: -rw-------. 1 atlas atlas      7672 Feb 26 02:55 heartbeat.json
2025-02-26 04:44:31 (70888): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 26 02:55 pilotlog.txt
2025-02-26 04:44:31 (70888): Guest Log: -rw-------. 1 atlas atlas   1415985 Feb 26 02:55 log.43205094._034577.job.log.1
2025-02-26 04:44:31 (70888): Guest Log: -rw-------. 1 atlas atlas       357 Feb 26 02:55 output.list
2025-02-26 04:44:31 (70888): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 26 02:55 runtime_log
2025-02-26 04:44:31 (70888): Guest Log: -rw-------. 1 atlas atlas   1781760 Feb 26 02:55 result.tar.gz
2025-02-26 04:44:31 (70888): Guest Log: -rw-------. 1 atlas atlas       661 Feb 26 02:55 uVFMDmubt56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmMItKDmFzHm7m.diag
2025-02-26 04:44:31 (70888): Guest Log: -rw-r--r--. 1 atlas atlas     10941 Feb 26 02:55 runtime_log.err
2025-02-26 04:44:31 (70888): Guest Log: Looking for outputfile HITS.43205094._034577.pool.root.1
2025-02-26 04:44:31 (70888): Guest Log: HITS file was successfully produced
2025-02-26 04:44:31 (70888): Guest Log: -rw-------. 1 atlas atlas 327231822 Feb 26 02:54 /home/atlas/RunAtlas/HITS.43205094._034577.pool.root.1
2025-02-26 04:44:32 (70888): Guest Log: Successfully finished the ATLAS job!
2025-02-26 04:44:32 (70888): Guest Log: Copying the results back to the shared directory!
2025-02-26 04:44:32 (70888): Guest Log:  *** Contents of shared directory: ***
2025-02-26 04:44:32 (70888): Guest Log: total 656868
2025-02-26 04:44:32 (70888): Guest Log: -rwxrwxrwx. 1 root root 343080143 Feb 25 22:47 ATLAS.root_0
2025-02-26 04:44:32 (70888): Guest Log: -rwxrwxrwx. 1 root root 327231822 Feb 26 02:44 HITS.pool.root.1
2025-02-26 04:44:32 (70888): Guest Log: -rwxrwxrwx. 1 root root     12026 Feb 25 22:47 init_data.xml
2025-02-26 04:44:32 (70888): Guest Log: -rwxrwxrwx. 1 root root    503548 Feb 25 17:54 input.tar.gz
2025-02-26 04:44:32 (70888): Guest Log: -rwxrwxrwx. 1 root root   1781760 Feb 26 02:44 result.tar.gz
2025-02-26 04:44:32 (70888): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 25 17:54 start_atlas.sh
2025-02-26 04:44:32 (70888): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-26 04:44:32 (70888): VM Completion File Detected.
2025-02-26 04:44:32 (70888): Powering off VM.
2025-02-26 04:44:33 (70888): Successfully stopped VM.
2025-02-26 04:44:33 (70888): Deregistering VM. (boinc_9f6bda646fd72e77, slot#4)
2025-02-26 04:44:33 (70888): Removing network bandwidth throttle group from VM.
2025-02-26 04:44:33 (70888): Removing VM from VirtualBox.
04:44:38 (70888): called boinc_finish(0)

</stderr_txt>
]]>

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