Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-26 09:42:11 (2024): Detected: vboxwrapper 26206
2025-02-26 09:42:11 (2024): Detected: BOINC client v8.0.2
2025-02-26 09:42:12 (2024): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-26 09:42:12 (2024): Successfully copied 'init_data.xml' to the shared directory.
2025-02-26 09:42:12 (2024): Create VM. (boinc_9f41713c6d430a9a, slot#0)
2025-02-26 09:42:13 (2024): Setting Memory Size for VM. (4400MB)
2025-02-26 09:42:13 (2024): Setting CPU Count for VM. (4)
2025-02-26 09:42:13 (2024): Setting Chipset Options for VM.
2025-02-26 09:42:14 (2024): Setting Graphics Controller Options for VM.
2025-02-26 09:42:14 (2024): Setting Boot Options for VM.
2025-02-26 09:42:14 (2024): Setting Network Configuration for NAT.
2025-02-26 09:42:14 (2024): Enabling VM Network Access.
2025-02-26 09:42:15 (2024): Disabling USB Support for VM.
2025-02-26 09:42:15 (2024): Disabling COM Port Support for VM.
2025-02-26 09:42:15 (2024): Disabling LPT Port Support for VM.
2025-02-26 09:42:15 (2024): Disabling Audio Support for VM.
2025-02-26 09:42:16 (2024): Disabling Clipboard Support for VM.
2025-02-26 09:42:16 (2024): Disabling Drag and Drop Support for VM.
2025-02-26 09:42:16 (2024): Adding storage controller(s) to VM.
2025-02-26 09:42:16 (2024): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-26 09:42:19 (2024): Adding VirtualBox Guest Additions to VM.
2025-02-26 09:42:19 (2024): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-26 09:42:20 (2024): forwarding host port 51978 to guest port 80
2025-02-26 09:42:20 (2024): Enabling remote desktop for VM.
2025-02-26 09:42:20 (2024): Enabling shared directory for VM.
2025-02-26 09:42:21 (2024): Starting VM using VBoxManage interface. (boinc_9f41713c6d430a9a, slot#0)
2025-02-26 09:42:26 (2024): Successfully started VM. (PID = '18832')
2025-02-26 09:42:26 (2024): Reporting VM Process ID to BOINC.
2025-02-26 09:42:26 (2024): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-26 09:42:26 (2024): Guest Log: CPUID EDX: 0x178bfbff
2025-02-26 09:42:26 (2024): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-26 09:42:26 (2024): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-26 09:42:26 (2024): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-26 09:42:26 (2024): Detected: Web Application Enabled (http://localhost:51978)
2025-02-26 09:42:26 (2024): Detected: Remote Desktop Enabled (localhost:51979)
2025-02-26 09:42:26 (2024): Preference change detected
2025-02-26 09:42:26 (2024): Setting CPU throttle for VM. (100%)
2025-02-26 09:42:26 (2024): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-26 09:42:28 (2024): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-26 09:42:28 (2024): Guest Log: BIOS: Booting from Hard Disk...
2025-02-26 09:42:30 (2024): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-26 09:42:30 (2024): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-26 09:42:30 (2024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-26 09:42:34 (2024): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-26 09:42:34 (2024): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-26 09:42:37 (2024): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-26 09:42:37 (2024): Guest Log: 00:00:00.000053 main     Log opened 2025-02-26T09:42:34.615597000Z
2025-02-26 09:42:37 (2024): Guest Log: 00:00:00.000100 main     OS Product: Linux
2025-02-26 09:42:37 (2024): Guest Log: 00:00:00.000111 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-26 09:42:37 (2024): Guest Log: 00:00:00.000120 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-26 09:42:37 (2024): Guest Log: 00:00:00.000130 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-26 09:42:37 (2024): Guest Log: 00:00:00.000130 main     Process ID: 1301
2025-02-26 09:42:37 (2024): Guest Log: 00:00:00.000130 main     Package type: LINUX_64BITS_GENERIC
2025-02-26 09:42:37 (2024): Guest Log: 00:00:00.000485 main     5.2.32 r132073 started. Verbose level = 0
2025-02-26 09:42:37 (2024): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-26 09:42:37 (2024): Guest Log: [INFO] Mounting shared directory
2025-02-26 09:42:37 (2024): Guest Log: [INFO] Checking for init_data.xml
2025-02-26 09:42:39 (2024): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-26 09:42:39 (2024): Guest Log: [INFO] Detected branch: prod
2025-02-26 09:42:39 (2024): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-26 09:42:39 (2024): Guest Log: Copying input files
2025-02-26 09:42:39 (2024): Guest Log: Copied input files into RunAtlas.
2025-02-26 09:42:39 (2024): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-26 09:42:39 (2024): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-26 09:42:39 (2024): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-26 09:42:39 (2024): Guest Log: Further information can be found at the LHC@home message board.
2025-02-26 09:42:47 (2024): Guest Log: 00:00:10.003026 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 176 000 000ns (GuestNow=1 740 559 366 440 775 000 ns GuestLast=1 740 562 954 616 775 000 ns fSetTimeLastLoop=true )
2025-02-26 09:42:47 (2024): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-26 09:42:47 (2024): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-26 09:42:47 (2024): Guest Log: 2.6.3.0 1579 0 30132 143068 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-26 09:42:48 (2024): Guest Log: copied the webapp to /var/www
2025-02-26 09:42:48 (2024): Guest Log: ATHENA_PROC_NUMBER=4
2025-02-26 09:42:48 (2024): Guest Log: ATHENA_CORE_NUMBER=4
2025-02-26 09:42:48 (2024): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-26 09:42:48 (2024): Guest Log:  *** Starting ATLAS job. (PandaID=6530424619 taskID=43401137) ***
2025-02-26 11:22:27 (2024): Status Report: Elapsed Time: '6000.000000'
2025-02-26 11:22:27 (2024): Status Report: CPU Time: '20903.578125'
2025-02-26 11:27:43 (2024): Guest Log:  *** Job finished ***
2025-02-26 11:27:43 (2024): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-26 11:27:43 (2024): Guest Log: 2025-02-26 10:27:31,887 | INFO     | [payload] execute_payloads thread has finished
2025-02-26 11:27:43 (2024): Guest Log: 2025-02-26 10:27:31,945 | INFO     | [job] control thread has finished
2025-02-26 11:27:43 (2024): Guest Log: 2025-02-26 10:27:33,465 | INFO     | [data] queue_monitor thread has finished
2025-02-26 11:27:43 (2024): Guest Log: 2025-02-26 10:27:35,432 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139969567893312)>', '<ExcThread(monitor, started 139969117005568)>']
2025-02-26 11:27:43 (2024): Guest Log: 2025-02-26 10:27:35,467 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-26 11:27:43 (2024): Guest Log: 2025-02-26 10:27:35,467 | INFO     | [monitor] control thread has ended
2025-02-26 11:27:43 (2024): Guest Log: 2025-02-26 10:27:40,444 | INFO     | all workflow threads have been joined
2025-02-26 11:27:43 (2024): Guest Log: 2025-02-26 10:27:40,445 | INFO     | end of generic workflow (traces error code: 0)
2025-02-26 11:27:43 (2024): Guest Log: 2025-02-26 10:27:40,445 | INFO     | traces error code: 0
2025-02-26 11:27:43 (2024): Guest Log: 2025-02-26 10:27:40,445 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-26 11:27:43 (2024): Guest Log: 2025-02-26 10:27:40,505 [wrapper] ==== pilot stdout END ====
2025-02-26 11:27:43 (2024): Guest Log: 2025-02-26 10:27:40,508 [wrapper] ==== wrapper stdout RESUME ====
2025-02-26 11:27:43 (2024): Guest Log: 2025-02-26 10:27:40,510 [wrapper] pilotpid: 5904
2025-02-26 11:27:43 (2024): Guest Log: 2025-02-26 10:27:40,512 [wrapper] Pilot exit status: 0
2025-02-26 11:27:43 (2024): Guest Log: 2025-02-26 10:27:40,575 [wrapper] pandaids: 6530424619
2025-02-26 11:27:43 (2024): Guest Log: 2025-02-26 10:27:40,589 [wrapper] cleanup supervisor_pilot  2071 5905
2025-02-26 11:27:43 (2024): Guest Log: 2025-02-26 10:27:40,591 [wrapper] Test setup, not cleaning
2025-02-26 11:27:43 (2024): Guest Log: 2025-02-26 10:27:40,594 [wrapper] apfmon messages muted
2025-02-26 11:27:43 (2024): Guest Log: 2025-02-26 10:27:40,596 [wrapper] ==== wrapper stdout END ====
2025-02-26 11:27:43 (2024): Guest Log: 2025-02-26 10:27:40,598 [wrapper] ==== wrapper stderr END ====
2025-02-26 11:27:43 (2024): Guest Log:  *** Error codes and diagnostics ***
2025-02-26 11:27:43 (2024): Guest Log:     "exeErrorCode": 0,
2025-02-26 11:27:43 (2024): Guest Log:     "exeErrorDiag": "",
2025-02-26 11:27:43 (2024): Guest Log:     "pilotErrorCode": 0,
2025-02-26 11:27:43 (2024): Guest Log:     "pilotErrorDiag": "",
2025-02-26 11:27:43 (2024): Guest Log:  *** Listing of results directory ***
2025-02-26 11:27:43 (2024): Guest Log: total 185712
2025-02-26 11:27:43 (2024): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 25 14:02 pilot3.tar.gz
2025-02-26 11:27:43 (2024): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 25 14:20 runpilot2-wrapper.sh
2025-02-26 11:27:43 (2024): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 25 14:21 queuedata.json
2025-02-26 11:27:43 (2024): Guest Log: -rwxr-xr-x. 1 atlas atlas      9013 Feb 26 08:42 init_data.xml
2025-02-26 11:27:43 (2024): Guest Log: -rwxr-xr-x. 1 atlas atlas    503558 Feb 26 08:42 input.tar.gz
2025-02-26 11:27:43 (2024): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 26 08:42 start_atlas.sh
2025-02-26 11:27:43 (2024): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 26 08:42 EVNT.43401135._000061.pool.root.1 -> /data/./ATLAS.root_0
2025-02-26 11:27:43 (2024): Guest Log: -rw-r--r--. 1 atlas atlas      2558 Feb 26 08:42 pandaJob.out
2025-02-26 11:27:43 (2024): Guest Log: -rw-------. 1 atlas atlas       424 Feb 26 08:42 setup.sh.local
2025-02-26 11:27:43 (2024): Guest Log: -rw-------. 1 atlas atlas    986636 Feb 26 08:43 agis_schedconf.cvmfs.json
2025-02-26 11:27:43 (2024): Guest Log: -rw-------. 1 atlas atlas   1569202 Feb 26 08:43 agis_ddmendpoints.agis.ALL.json
2025-02-26 11:27:43 (2024): Guest Log: drwx------. 4 atlas atlas      4096 Feb 26 08:43 pilot3
2025-02-26 11:27:43 (2024): Guest Log: -rw-------. 1 atlas atlas        95 Feb 26 10:27 pilot_heartbeat.json
2025-02-26 11:27:43 (2024): Guest Log: -rw-------. 1 atlas atlas 184872698 Feb 26 10:27 HITS.43401137._001210.pool.root.1
2025-02-26 11:27:43 (2024): Guest Log: -rw-------. 1 atlas atlas      1026 Feb 26 10:27 memory_monitor_summary.json
2025-02-26 11:27:43 (2024): Guest Log: -rw-------. 1 atlas atlas    245243 Feb 26 10:27 log.43401137._001210.job.log.tgz.1
2025-02-26 11:27:43 (2024): Guest Log: -rw-------. 1 atlas atlas      7697 Feb 26 10:27 heartbeat.json
2025-02-26 11:27:43 (2024): Guest Log: -rw-------. 1 atlas atlas      4398 Feb 26 10:27 pilotlog.txt
2025-02-26 11:27:43 (2024): Guest Log: -rw-------. 1 atlas atlas    542657 Feb 26 10:27 log.43401137._001210.job.log.1
2025-02-26 11:27:43 (2024): Guest Log: -rw-------. 1 atlas atlas       357 Feb 26 10:27 output.list
2025-02-26 11:27:43 (2024): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 26 10:27 runtime_log
2025-02-26 11:27:43 (2024): Guest Log: -rw-------. 1 atlas atlas    808960 Feb 26 10:27 result.tar.gz
2025-02-26 11:27:43 (2024): Guest Log: -rw-r--r--. 1 atlas atlas     10959 Feb 26 10:27 runtime_log.err
2025-02-26 11:27:43 (2024): Guest Log: -rw-------. 1 atlas atlas       660 Feb 26 10:27 5NXLDmQyA76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm4dwKDmM6Rh4n.diag
2025-02-26 11:27:43 (2024): Guest Log: Looking for outputfile HITS.43401137._001210.pool.root.1
2025-02-26 11:27:43 (2024): Guest Log: HITS file was successfully produced
2025-02-26 11:27:43 (2024): Guest Log: -rw-------. 1 atlas atlas 184872698 Feb 26 10:27 /home/atlas/RunAtlas/HITS.43401137._001210.pool.root.1
2025-02-26 11:27:44 (2024): Guest Log: Successfully finished the ATLAS job!
2025-02-26 11:27:44 (2024): Guest Log: Copying the results back to the shared directory!
2025-02-26 11:27:44 (2024): Guest Log:  *** Contents of shared directory: ***
2025-02-26 11:27:44 (2024): Guest Log: total 428444
2025-02-26 11:27:44 (2024): Guest Log: -rwxrwxrwx. 1 root root 252502785 Feb 26 08:42 ATLAS.root_0
2025-02-26 11:27:44 (2024): Guest Log: -rwxrwxrwx. 1 root root 184872698 Feb 26  2025 HITS.pool.root.1
2025-02-26 11:27:44 (2024): Guest Log: -rwxrwxrwx. 1 root root      9013 Feb 26 08:42 init_data.xml
2025-02-26 11:27:44 (2024): Guest Log: -rwxrwxrwx. 1 root root    503558 Feb 25 16:36 input.tar.gz
2025-02-26 11:27:44 (2024): Guest Log: -rwxrwxrwx. 1 root root    808960 Feb 26  2025 result.tar.gz
2025-02-26 11:27:44 (2024): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 25 16:36 start_atlas.sh
2025-02-26 11:27:44 (2024): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-26 11:27:44 (2024): VM Completion File Detected.
2025-02-26 11:27:44 (2024): Powering off VM.
2025-02-26 11:27:45 (2024): Successfully stopped VM.
2025-02-26 11:27:45 (2024): Deregistering VM. (boinc_9f41713c6d430a9a, slot#0)
2025-02-26 11:27:45 (2024): Removing network bandwidth throttle group from VM.
2025-02-26 11:27:45 (2024): Removing VM from VirtualBox.
11:27:50 (2024): called boinc_finish(0)

</stderr_txt>
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