Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:04:13 (1640897): wrapper (7.7.26015): starting
11:04:13 (1640897): wrapper: running run_atlas (--nthreads 8)
[2025-02-25 11:04:13] Arguments: --nthreads 8
[2025-02-25 11:04:13] Threads: 8
[2025-02-25 11:04:13] Checking for CVMFS
[2025-02-25 11:04:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 11:04:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 11:04:14] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 11:04:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 11:04:17] 2.11.5.0 2738210 7918 458772 143043 1 434 18692803 37641216 34460 130560 0 2081731 98.675 6194317 20464 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 11:04:17] CVMFS is ok
[2025-02-25 11:04:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 11:04:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 11:04:17] Further information can be found at the LHC@home message board.
[2025-02-25 11:04:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 11:04:17] Checking for apptainer binary...
[2025-02-25 11:04:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 11:04:17] Running /usr/bin/apptainer --version
[2025-02-25 11:04:17] apptainer version 1.3.6-1.el9
[2025-02-25 11:04:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 11:04:18] c-1-3.aglt2.org
[2025-02-25 11:04:18] apptainer works
[2025-02-25 11:04:18] Set ATHENA_PROC_NUMBER=8
[2025-02-25 11:04:18] Set ATHENA_CORE_NUMBER=8
[2025-02-25 11:04:18] Starting ATLAS job with PandaID=6530459551
[2025-02-25 11:04:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 20:54:32]  *** The last 200 lines of the pilot log: ***
[2025-02-25 20:54:32] 2025-02-26 01:53:52,562 | INFO     | current chi2=6.987075825598017 (change=10.050029750475687 %)
[2025-02-25 20:54:32] 2025-02-26 01:53:52,562 | INFO     | right removable region: 570
[2025-02-25 20:54:32] 2025-02-26 01:53:52,563 | INFO     | model: linear, x: [1740500004.0, 1740500065.0, 1740500126.0, 1740500187.0, 1740500248.0, 1740500309.0, 1740500370.0, 1740500431.0, 1740500492.0, 1740500553.0, 1740
[2025-02-25 20:54:32] 2025-02-26 01:53:52,563 | INFO     | sum of square deviations: 57727262890.81681
[2025-02-25 20:54:32] 2025-02-26 01:53:52,595 | INFO     | sum of deviations: 205287332339.7373
[2025-02-25 20:54:32] 2025-02-26 01:53:52,595 | INFO     | mean x: 1740517389.9544659
[2025-02-25 20:54:32] 2025-02-26 01:53:52,596 | INFO     | mean y: 2104930.220665499
[2025-02-25 20:54:32] 2025-02-26 01:53:52,596 | INFO     | -- intersect: -6187451857.712795
[2025-02-25 20:54:32] 2025-02-26 01:53:52,596 | INFO     | intersect: -6187451857.712795
[2025-02-25 20:54:32] 2025-02-26 01:53:52,596 | INFO     | chi2: 4.766195375076759
[2025-02-25 20:54:32] 2025-02-26 01:53:52,597 | INFO     | current chi2=4.766195375076759 (change=38.641122138547686 %)
[2025-02-25 20:54:32] 2025-02-26 01:53:52,597 | INFO     | model: linear, x: [1740500309.0, 1740500370.0, 1740500431.0, 1740500492.0, 1740500553.0, 1740500614.0, 1740500676.0, 1740500737.0, 1740500797.0, 1740500859.0, 1740
[2025-02-25 20:54:32] 2025-02-26 01:53:52,598 | INFO     | sum of square deviations: 56223840568.72086
[2025-02-25 20:54:32] 2025-02-26 01:53:52,639 | INFO     | sum of deviations: 98353322609.72086
[2025-02-25 20:54:32] 2025-02-26 01:53:52,639 | INFO     | mean x: 1740517542.4628975
[2025-02-25 20:54:32] 2025-02-26 01:53:52,639 | INFO     | mean y: 2115776.4628975266
[2025-02-25 20:54:32] 2025-02-26 01:53:52,640 | INFO     | -- intersect: -3042601226.6827044
[2025-02-25 20:54:32] 2025-02-26 01:53:52,640 | INFO     | intersect: -3042601226.6827044
[2025-02-25 20:54:32] 2025-02-26 01:53:52,640 | INFO     | chi2: 3.022465249644426
[2025-02-25 20:54:32] 2025-02-26 01:53:52,641 | INFO     | current chi2=3.022465249644426 (change=36.585368164943304 %)
[2025-02-25 20:54:32] 2025-02-26 01:53:52,650 | INFO     | model: linear, x: [1740500614.0, 1740500676.0, 1740500737.0, 1740500797.0, 1740500859.0, 1740500920.0, 1740500980.0, 1740501042.0, 1740501103.0, 1740501164.0, 1740
[2025-02-25 20:54:32] 2025-02-26 01:53:52,652 | INFO     | sum of square deviations: 54746744321.543365
[2025-02-25 20:54:32] 2025-02-26 01:53:52,683 | INFO     | sum of deviations: -201340790.4723282
[2025-02-25 20:54:32] 2025-02-26 01:53:52,683 | INFO     | mean x: 1740517694.9714794
[2025-02-25 20:54:32] 2025-02-26 01:53:52,683 | INFO     | mean y: 2125947.532976827
[2025-02-25 20:54:32] 2025-02-26 01:53:52,684 | INFO     | -- intersect: 8527007.776457496
[2025-02-25 20:54:32] 2025-02-26 01:53:52,684 | INFO     | intersect: 8527007.776457496
[2025-02-25 20:54:32] 2025-02-26 01:53:52,689 | INFO     | chi2: 1.534058621335026
[2025-02-25 20:54:32] 2025-02-26 01:53:52,689 | INFO     | current chi2=1.534058621335026 (change=49.2447887857272 %)
[2025-02-25 20:54:32] 2025-02-26 01:53:52,689 | INFO     | model: linear, x: [1740500920.0, 1740500980.0, 1740501042.0, 1740501103.0, 1740501164.0, 1740501225.0, 1740501287.0, 1740501346.0, 1740501408.0, 1740501468.0, 1740
[2025-02-25 20:54:32] 2025-02-26 01:53:52,690 | INFO     | sum of square deviations: 53295844130.64709
[2025-02-25 20:54:32] 2025-02-26 01:53:52,729 | INFO     | sum of deviations: -47604372424.69064
[2025-02-25 20:54:32] 2025-02-26 01:53:52,730 | INFO     | mean x: 1740517847.4748201
[2025-02-25 20:54:32] 2025-02-26 01:53:52,730 | INFO     | mean y: 2130920.5935251797
[2025-02-25 20:54:32] 2025-02-26 01:53:52,730 | INFO     | -- intersect: 1556778589.1791291
[2025-02-25 20:54:32] 2025-02-26 01:53:52,730 | INFO     | intersect: 1556778589.1791291
[2025-02-25 20:54:32] 2025-02-26 01:53:52,731 | INFO     | chi2: 1.1347634938416467
[2025-02-25 20:54:32] 2025-02-26 01:53:52,731 | INFO     | current chi2=1.1347634938416467 (change=26.02867465037873 %)
[2025-02-25 20:54:32] 2025-02-26 01:53:52,732 | INFO     | model: linear, x: [1740501225.0, 1740501287.0, 1740501346.0, 1740501408.0, 1740501468.0, 1740501529.0, 1740501591.0, 1740501655.0, 1740501713.0, 1740501774.0, 1740
[2025-02-25 20:54:32] 2025-02-26 01:53:52,740 | INFO     | sum of square deviations: 51870838806.6932
[2025-02-25 20:54:32] 2025-02-26 01:53:52,768 | INFO     | sum of deviations: -49899594443.18877
[2025-02-25 20:54:32] 2025-02-26 01:53:52,769 | INFO     | mean x: 1740517999.9764066
[2025-02-25 20:54:32] 2025-02-26 01:53:52,769 | INFO     | mean y: 2131165.9854809437
[2025-02-25 20:54:32] 2025-02-26 01:53:52,769 | INFO     | -- intersect: 1676504365.2229264
[2025-02-25 20:54:32] 2025-02-26 01:53:52,769 | INFO     | intersect: 1676504365.2229264
[2025-02-25 20:54:32] 2025-02-26 01:53:52,770 | INFO     | chi2: 1.1331571690685138
[2025-02-25 20:54:32] 2025-02-26 01:53:52,770 | INFO     | current chi2=1.1331571690685138 (change=0.1415559085087193 %)
[2025-02-25 20:54:32] 2025-02-26 01:53:52,770 | INFO     | left removable region: 50
[2025-02-25 20:54:32] 2025-02-26 01:53:52,770 | INFO     | model: linear, x: [1740502750.0, 1740502812.0, 1740502872.0, 1740502932.0, 1740502994.0, 1740503057.0, 1740503115.0, 1740503177.0, 1740503241.0, 1740503298.0, 1740
[2025-02-25 20:54:32] 2025-02-26 01:53:52,771 | INFO     | sum of square deviations: 43599097393.90576
[2025-02-25 20:54:32] 2025-02-26 01:53:52,804 | INFO     | sum of deviations: -27220904217.842297
[2025-02-25 20:54:32] 2025-02-26 01:53:52,804 | INFO     | mean x: 1740518579.4865384
[2025-02-25 20:54:32] 2025-02-26 01:53:52,804 | INFO     | mean y: 2135130.1653846153
[2025-02-25 20:54:32] 2025-02-26 01:53:52,805 | INFO     | -- intersect: 1088820230.8574119
[2025-02-25 20:54:32] 2025-02-26 01:53:52,805 | INFO     | intersect: 1088820230.8574119
[2025-02-25 20:54:32] 2025-02-26 01:53:52,805 | INFO     | chi2: 0.3064098219750464
[2025-02-25 20:54:32] 2025-02-26 01:53:52,806 | INFO     | -- intersect: 1088820230.8574119
[2025-02-25 20:54:32] 2025-02-26 01:53:52,806 | INFO     | current memory leak: -0.62 B/s (using 520 data points, chi2=0.31)
[2025-02-25 20:54:32] 2025-02-26 01:53:52,807 | INFO     | ..............................
[2025-02-25 20:54:32] 2025-02-26 01:53:52,819 | INFO     | . Timing measurements:
[2025-02-25 20:54:32] 2025-02-26 01:53:52,819 | INFO     | . get job = 0 s
[2025-02-25 20:54:32] 2025-02-26 01:53:52,819 | INFO     | . initial setup = 6 s
[2025-02-25 20:54:32] 2025-02-26 01:53:52,819 | INFO     | . payload setup = 41 s
[2025-02-25 20:54:32] 2025-02-26 01:53:52,820 | INFO     | . stage-in = 0 s
[2025-02-25 20:54:32] 2025-02-26 01:53:52,820 | INFO     | . payload execution = 35117 s
[2025-02-25 20:54:32] 2025-02-26 01:53:52,820 | INFO     | . stage-out = 7 s
[2025-02-25 20:54:32] 2025-02-26 01:53:52,820 | INFO     | . log creation = 1 s
[2025-02-25 20:54:32] 2025-02-26 01:53:52,820 | INFO     | ..............................
[2025-02-25 20:54:32] 2025-02-26 01:53:53,386 | INFO     | 
[2025-02-25 20:54:32] 2025-02-26 01:53:53,386 | INFO     | job summary report
[2025-02-25 20:54:32] 2025-02-26 01:53:53,386 | INFO     | --------------------------------------------------
[2025-02-25 20:54:32] 2025-02-26 01:53:53,386 | INFO     | PanDA job id: 6530459551
[2025-02-25 20:54:32] 2025-02-26 01:53:53,386 | INFO     | task id: 43401121
[2025-02-25 20:54:32] 2025-02-26 01:53:53,387 | INFO     | errors: (none)
[2025-02-25 20:54:32] 2025-02-26 01:53:53,387 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 20:54:32] 2025-02-26 01:53:53,387 | INFO     | pilot state: finished 
[2025-02-25 20:54:32] 2025-02-26 01:53:53,387 | INFO     | transexitcode: 0
[2025-02-25 20:54:32] 2025-02-26 01:53:53,387 | INFO     | exeerrorcode: 0
[2025-02-25 20:54:32] 2025-02-26 01:53:53,387 | INFO     | exeerrordiag: 
[2025-02-25 20:54:32] 2025-02-26 01:53:53,387 | INFO     | exitcode: 0
[2025-02-25 20:54:32] 2025-02-26 01:53:53,387 | INFO     | exitmsg: OK
[2025-02-25 20:54:32] 2025-02-26 01:53:53,387 | INFO     | cpuconsumptiontime: 49047 s
[2025-02-25 20:54:32] 2025-02-26 01:53:53,387 | INFO     | nevents: 400
[2025-02-25 20:54:32] 2025-02-26 01:53:53,387 | INFO     | neventsw: 0
[2025-02-25 20:54:32] 2025-02-26 01:53:53,387 | INFO     | pid: 1714488
[2025-02-25 20:54:32] 2025-02-26 01:53:53,387 | INFO     | pgrp: 1714488
[2025-02-25 20:54:32] 2025-02-26 01:53:53,388 | INFO     | corecount: 8
[2025-02-25 20:54:32] 2025-02-26 01:53:53,388 | INFO     | event service: False
[2025-02-25 20:54:32] 2025-02-26 01:53:53,388 | INFO     | sizes: {0: 2376115, 1: 2376716, 2: 2376800, 3: 2376856, 4: 2377027, 5: 2377055, 6: 2377239, 17: 2377267, 28: 2377295, 39: 2377323, 41: 2377557, 51: 2377865, 35164:
[2025-02-25 20:54:32] 2025-02-26 01:53:53,388 | INFO     | --------------------------------------------------
[2025-02-25 20:54:32] 2025-02-26 01:53:53,388 | INFO     | 
[2025-02-25 20:54:32] 2025-02-26 01:53:53,388 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 20:54:32] 2025-02-26 01:53:53,484 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 20:54:32] 2025-02-26 01:53:53,484 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 20:54:32] 2025-02-26 01:53:53,484 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 20:54:32] 2025-02-26 01:53:53,484 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 20:54:32] 2025-02-26 01:53:53,484 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 20:54:32] 2025-02-26 01:53:53,484 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 20:54:32] 2025-02-26 01:53:53,484 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 20:54:32] 2025-02-26 01:53:53,484 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 20:54:32] 2025-02-26 01:53:53,484 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 20:54:32] 2025-02-26 01:53:53,485 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 20:54:32] 2025-02-26 01:53:53,485 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 20:54:32] 2025-02-26 01:53:53,485 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 20:54:32] 2025-02-26 01:53:53,485 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 20:54:32] 2025-02-26 01:53:53,485 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 20:54:32] 2025-02-26 01:53:53,485 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 20:54:32] 2025-02-26 01:53:53,485 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 20:54:32] 2025-02-26 01:53:53,485 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 20:54:32] 2025-02-26 01:53:53,485 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 20:54:32] 2025-02-26 01:53:53,485 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 20:54:32] 2025-02-26 01:53:53,485 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 20:54:32] 2025-02-26 01:53:53,486 | INFO     | job 6530459551 has completed (purged errors)
[2025-02-25 20:54:32] 2025-02-26 01:53:53,486 | INFO     | overall cleanup function is called
[2025-02-25 20:54:32] 2025-02-26 01:53:54,511 | INFO     | --- collectZombieJob: --- 10, [1714488]
[2025-02-25 20:54:32] 2025-02-26 01:53:54,511 | INFO     | zombie collector waiting for pid 1714488
[2025-02-25 20:54:32] 2025-02-26 01:53:54,511 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 20:54:32] 2025-02-26 01:53:54,511 | INFO     | collected zombie processes
[2025-02-25 20:54:32] 2025-02-26 01:53:54,512 | INFO     | will attempt to kill all subprocesses of pid=1714488
[2025-02-25 20:54:32] 2025-02-26 01:53:56,400 | INFO     | process IDs to be killed: [1714488] (in reverse order)
[2025-02-25 20:54:32] 2025-02-26 01:53:57,029 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 20:54:32] 2025-02-26 01:53:57,029 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 20:54:32] 2025-02-26 01:53:57,344 | INFO     | did not find any defunct processes belonging to 1714488
[2025-02-25 20:54:32] 2025-02-26 01:53:57,469 | INFO     | did not find any defunct processes belonging to 1714488
[2025-02-25 20:54:32] 2025-02-26 01:53:57,470 | INFO     | ready for new job
[2025-02-25 20:54:32] 2025-02-26 01:53:57,470 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 20:54:32] 2025-02-26 01:53:57,477 | INFO     | **************************************
[2025-02-25 20:54:32] 2025-02-26 01:53:57,477 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 20:54:32] 2025-02-26 01:53:57,477 | INFO     | **************************************
[2025-02-25 20:54:32] 2025-02-26 01:53:57,477 | INFO     | 
[2025-02-25 20:54:32] 2025-02-26 01:53:57,545 | INFO     | architecture information:
[2025-02-25 20:54:32] 2025-02-26 01:53:57,548 | INFO     | executing command: cat /etc/os-release
[2025-02-25 20:54:32] 2025-02-26 01:53:57,644 | INFO     | cat /etc/os-release:
[2025-02-25 20:54:32] NAME="CentOS Linux"
[2025-02-25 20:54:32] VERSION="7 (Core)"
[2025-02-25 20:54:32] ID="centos"
[2025-02-25 20:54:32] ID_LIKE="rhel fedora"
[2025-02-25 20:54:32] VERSION_ID="7"
[2025-02-25 20:54:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 20:54:32] ANSI_COLOR="0;31"
[2025-02-25 20:54:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 20:54:32] HOME_URL="https://www.centos.org/"
[2025-02-25 20:54:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 20:54:32] 
[2025-02-25 20:54:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 20:54:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 20:54:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 20:54:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 20:54:32] 
[2025-02-25 20:54:32] 2025-02-26 01:53:57,645 | INFO     | **************************************
[2025-02-25 20:54:32] 2025-02-26 01:53:58,148 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 20:54:32] 2025-02-26 01:53:58,204 | INFO     | sufficient remaining disk space (61458087936 B)
[2025-02-25 20:54:32] 2025-02-26 01:53:58,204 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 20:54:32] 2025-02-26 01:53:58,205 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 20:54:32] 2025-02-26 01:53:58,217 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 20:54:32] 2025-02-26 01:53:58,217 | INFO     | aborting loop
[2025-02-25 20:54:32] 2025-02-26 01:53:58,400 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 20:54:32] 2025-02-26 01:53:58,415 | INFO     | all data control threads have been joined
[2025-02-25 20:54:32] 2025-02-26 01:53:59,115 | INFO     | PID=1668774 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-25 20:54:32] 2025-02-26 01:53:59,115 | INFO     | .. there are 68 such processes running
[2025-02-25 20:54:32] 2025-02-26 01:53:59,116 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 20:54:32] 2025-02-26 01:53:59,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 20:54:32] 2025-02-26 01:53:59,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 20:54:32] 2025-02-26 01:53:59,211 | INFO     | [job] retrieve thread has finished
[2025-02-25 20:54:32] 2025-02-26 01:53:59,250 | INFO     | [job] job monitor thread has finished
[2025-02-25 20:54:32] 2025-02-26 01:53:59,406 | INFO     | [job] queue monitor thread has finished
[2025-02-25 20:54:32] 2025-02-26 01:53:59,428 | INFO     | [data] control thread has finished
[2025-02-25 20:54:32] 2025-02-26 01:53:59,495 | INFO     | all job control threads have been joined
[2025-02-25 20:54:32] 2025-02-26 01:53:59,618 | INFO     | all payload control threads have been joined
[2025-02-25 20:54:32] 2025-02-26 01:53:59,669 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 20:54:32] 2025-02-26 01:53:59,669 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 20:54:32] 2025-02-26 01:53:59,822 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 20:54:32] 2025-02-26 01:53:59,918 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 20:54:32] 2025-02-26 01:53:59,978 | INFO     | [job] validate thread has finished
[2025-02-25 20:54:32] 2025-02-26 01:53:59,996 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 20:54:32] 2025-02-26 01:54:00,025 | INFO     | [data] copytool_in thread has finished
[2025-02-25 20:54:32] 2025-02-26 01:54:00,501 | INFO     | [job] control thread has finished
[2025-02-25 20:54:32] 2025-02-26 01:54:00,624 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 20:54:32] 2025-02-26 01:54:00,625 | INFO     | [payload] control thread has finished
[2025-02-25 20:54:32] 2025-02-26 01:54:00,725 | INFO     | [payload] failed_post thread has finished
[2025-02-25 20:54:32] 2025-02-26 01:54:00,726 | INFO     | [payload] validate_post thread has finished
[2025-02-25 20:54:32] 2025-02-26 01:54:01,676 | INFO     | [data] copytool_out thread has finished
[2025-02-25 20:54:32] 2025-02-26 01:54:03,678 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 20:54:32] 2025-02-26 01:54:04,371 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140365421287232)>', '<ExcThread(monitor, started 140364933478144)>']
[2025-02-25 20:54:32] 2025-02-26 01:54:05,161 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 20:54:32] 2025-02-26 01:54:05,161 | INFO     | [monitor] control thread has ended
[2025-02-25 20:54:32] 2025-02-26 01:54:09,399 | INFO     | all workflow threads have been joined
[2025-02-25 20:54:32] 2025-02-26 01:54:09,399 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 20:54:32] 2025-02-26 01:54:09,400 | INFO     | traces error code: 0
[2025-02-25 20:54:32] 2025-02-26 01:54:09,400 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 20:54:32] 2025-02-26 01:54:10,466 [wrapper] ==== pilot stdout END ====
[2025-02-25 20:54:32] 2025-02-26 01:54:10,549 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 20:54:32] 2025-02-26 01:54:10,564 [wrapper] pilotpid: 1668774
[2025-02-25 20:54:32] 2025-02-26 01:54:10,604 [wrapper] Pilot exit status: 0
[2025-02-25 20:54:32] 2025-02-26 01:54:10,744 [wrapper] pandaids: 6530459551
[2025-02-25 20:54:32] 2025-02-26 01:54:10,911 [wrapper] cleanup supervisor_pilot 1887588 1668775
[2025-02-25 20:54:32] 2025-02-26 01:54:10,915 [wrapper] Test setup, not cleaning
[2025-02-25 20:54:32] 2025-02-26 01:54:10,927 [wrapper] apfmon messages muted
[2025-02-25 20:54:32] 2025-02-26 01:54:10,934 [wrapper] ==== wrapper stdout END ====
[2025-02-25 20:54:32] 2025-02-26 01:54:10,940 [wrapper] ==== wrapper stderr END ====
[2025-02-25 20:54:32]  *** Error codes and diagnostics ***
[2025-02-25 20:54:32]     "exeErrorCode": 0,
[2025-02-25 20:54:32]     "exeErrorDiag": "",
[2025-02-25 20:54:32]     "pilotErrorCode": 0,
[2025-02-25 20:54:32]     "pilotErrorDiag": "",
[2025-02-25 20:54:32]  *** Listing of results directory ***
[2025-02-25 20:54:32] total 440960
[2025-02-25 20:54:32] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 09:02 pilot3.tar.gz
[2025-02-25 20:54:32] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 09:44 queuedata.json
[2025-02-25 20:54:32] -rwx------. 1 boincer umatlas     35865 Feb 25 09:44 runpilot2-wrapper.sh
[2025-02-25 20:54:32] -rw-r--r--. 1 boincer umatlas       100 Feb 25 11:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 20:54:32] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 11:04 run_atlas
[2025-02-25 20:54:32] -rw-r--r--. 1 boincer umatlas       105 Feb 25 11:04 job.xml
[2025-02-25 20:54:32] -rw-r--r--. 2 boincer umatlas 249918290 Feb 25 11:04 EVNT.43401119._000089.pool.root.1
[2025-02-25 20:54:32] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 11:04 start_atlas.sh
[2025-02-25 20:54:32] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 11:04 shared
[2025-02-25 20:54:32] -rw-r--r--. 2 boincer umatlas    503552 Feb 25 11:04 input.tar.gz
[2025-02-25 20:54:32] -rw-r--r--. 1 boincer umatlas         0 Feb 25 11:04 boinc_lockfile
[2025-02-25 20:54:32] -rw-r--r--. 1 boincer umatlas      2541 Feb 25 11:04 pandaJob.out
[2025-02-25 20:54:32] -rw-------. 1 boincer umatlas       467 Feb 25 11:04 setup.sh.local
[2025-02-25 20:54:32] -rw-------. 1 boincer umatlas    988282 Feb 25 11:05 agis_schedconf.cvmfs.json
[2025-02-25 20:54:32] drwx------. 4 boincer umatlas      4096 Feb 25 11:05 pilot3
[2025-02-25 20:54:32] -rw-r--r--. 1 boincer umatlas      6837 Feb 25 20:46 init_data.xml
[2025-02-25 20:54:32] -rw-------. 1 boincer umatlas 189159554 Feb 25 20:51 HITS.43401121._002223.pool.root.1
[2025-02-25 20:54:32] -rw-r--r--. 1 boincer umatlas       531 Feb 25 20:51 boinc_task_state.xml
[2025-02-25 20:54:32] -rw-------. 1 boincer umatlas      1041 Feb 25 20:53 memory_monitor_summary.json
[2025-02-25 20:54:32] -rw-------. 1 boincer umatlas   1573632 Feb 25 20:53 agis_ddmendpoints.agis.ALL.json
[2025-02-25 20:54:32] -rw-------. 1 boincer umatlas    644419 Feb 25 20:53 log.43401121._002223.job.log.tgz.1
[2025-02-25 20:54:32] -rw-------. 1 boincer umatlas        95 Feb 25 20:53 pilot_heartbeat.json
[2025-02-25 20:54:32] -rw-------. 1 boincer umatlas      7727 Feb 25 20:53 heartbeat.json
[2025-02-25 20:54:32] -rw-------. 1 boincer umatlas      4610 Feb 25 20:54 pilotlog.txt
[2025-02-25 20:54:32] -rw-------. 1 boincer umatlas   3683398 Feb 25 20:54 log.43401121._002223.job.log.1
[2025-02-25 20:54:32] -rw-------. 1 boincer umatlas       357 Feb 25 20:54 output.list
[2025-02-25 20:54:32] -rw-r--r--. 1 boincer umatlas       620 Feb 25 20:54 runtime_log
[2025-02-25 20:54:32] -rw-------. 1 boincer umatlas   4352000 Feb 25 20:54 result.tar.gz
[2025-02-25 20:54:32] -rw-r--r--. 1 boincer umatlas     11404 Feb 25 20:54 runtime_log.err
[2025-02-25 20:54:32] -rw-------. 1 boincer umatlas       654 Feb 25 20:54 NEiMDmULB76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmpyfKDmRQlj2n.diag
[2025-02-25 20:54:32] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 20:54 boinc_mmap_file
[2025-02-25 20:54:32] -rw-r--r--. 1 boincer umatlas        28 Feb 25 20:54 wrapper_checkpoint.txt
[2025-02-25 20:54:32] -rw-r--r--. 1 boincer umatlas     21802 Feb 25 20:54 stderr.txt
[2025-02-25 20:54:32] HITS file was successfully produced:
[2025-02-25 20:54:32] -rw-------. 1 boincer umatlas 189159554 Feb 25 20:51 shared/HITS.pool.root.1
[2025-02-25 20:54:32]  *** Contents of shared directory: ***
[2025-02-25 20:54:32] total 433564
[2025-02-25 20:54:32] -rw-r--r--. 2 boincer umatlas 249918290 Feb 25 11:04 ATLAS.root_0
[2025-02-25 20:54:32] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 11:04 start_atlas.sh
[2025-02-25 20:54:32] -rw-r--r--. 2 boincer umatlas    503552 Feb 25 11:04 input.tar.gz
[2025-02-25 20:54:32] -rw-------. 1 boincer umatlas 189159554 Feb 25 20:51 HITS.pool.root.1
[2025-02-25 20:54:32] -rw-------. 1 boincer umatlas   4352000 Feb 25 20:54 result.tar.gz
20:54:34 (1640897): run_atlas exited; CPU time 49217.414912
20:54:34 (1640897): called boinc_finish(0)

</stderr_txt>
]]>

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