Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:05:14 (27797): wrapper (7.7.26015): starting
11:05:14 (27797): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 11:05:14] Arguments: --nthreads 12
[2025-02-25 11:05:14] Threads: 12
[2025-02-25 11:05:14] Checking for CVMFS
[2025-02-25 11:05:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 11:05:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 11:05:14] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 11:05:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 11:05:14] 2.11.2.0 25961 308936 151588 143043 3 58 19835755 20275201 1 130560 0 24481556 99.986 7614457 41809 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 11:05:14] CVMFS is ok
[2025-02-25 11:05:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 11:05:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 11:05:14] Further information can be found at the LHC@home message board.
[2025-02-25 11:05:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 11:05:14] Checking for apptainer binary...
[2025-02-25 11:05:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 11:05:14] Running /usr/bin/apptainer --version
[2025-02-25 11:05:14] apptainer version 1.3.2-1.el7
[2025-02-25 11:05:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 11:05:15] c-205-5.aglt2.org
[2025-02-25 11:05:15] apptainer works
[2025-02-25 11:05:15] Set ATHENA_PROC_NUMBER=12
[2025-02-25 11:05:15] Set ATHENA_CORE_NUMBER=12
[2025-02-25 11:05:16] Starting ATLAS job with PandaID=6530459298
[2025-02-25 11:05:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 12:30:11]  *** The last 200 lines of the pilot log: ***
[2025-02-25 12:30:11]  domain=
[2025-02-25 12:30:11]  filesize=367394
[2025-02-25 12:30:11]  filetype=log
[2025-02-25 12:30:11]  guid=130fe2f5-7e4b-4d03-8329-5c9202ccdcad
[2025-02-25 12:30:11]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-25 12:30:11]  is_altstaged=None
[2025-02-25 12:30:11]  is_tar=False
[2025-02-25 12:30:11]  lfn=log.43401121._001992.job.log.tgz.1
[2025-02-25 12:30:11]  mtime=0
[2025-02-25 12:30:11]  protocol_id=None
[2025-02-25 12:30:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 12:30:11]  replicas=None
[2025-02-25 12:30:11]  scope=mc23_13p6TeV
[2025-02-25 12:30:11]  status=None
[2025-02-25 12:30:11]  status_code=0
[2025-02-25 12:30:11]  storage_token=
[2025-02-25 12:30:11]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530459298/log.43401121._001992.job.log.tgz.1
[2025-02-25 12:30:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/1a/log.43401121._001992.job.log.tgz.1
[2025-02-25 12:30:11]  workdir=None
[2025-02-25 12:30:11] ]
[2025-02-25 12:30:11] 2025-02-25 17:29:50,006 | INFO     | transferring file log.43401121._001992.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530459298/log.43401121._001992.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 12:30:11] 2025-02-25 17:29:50,006 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530459298/log.43401121._001992.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401121._001992.job
[2025-02-25 12:30:11] 2025-02-25 17:29:50,028 | INFO     | adding to output.list: log.43401121._001992.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/1a/log.43401121._001992.job.log.tg
[2025-02-25 12:30:11] 2025-02-25 17:29:50,029 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 12:30:11] 2025-02-25 17:29:50,030 | INFO     | summary of transferred files:
[2025-02-25 12:30:11] 2025-02-25 17:29:50,030 | INFO     |  -- lfn=log.43401121._001992.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 12:30:11] 2025-02-25 17:29:50,030 | INFO     | stage-out finished correctly
[2025-02-25 12:30:11] 2025-02-25 17:29:50,125 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 12:30:11] 2025-02-25 17:29:51,639 | INFO     | job 6530459298 has state=finished
[2025-02-25 12:30:11] 2025-02-25 17:29:51,640 | INFO     | preparing for final server update for job 6530459298 in state='finished'
[2025-02-25 12:30:11] 2025-02-25 17:29:51,641 | INFO     | this job has now completed (state=finished)
[2025-02-25 12:30:11] 2025-02-25 17:29:51,641 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 12:30:11] 2025-02-25 17:29:51,642 | INFO     | log transfer has been attempted: DONE
[2025-02-25 12:30:11] 2025-02-25 17:29:51,642 | INFO     | job 6530459298 has finished - writing final server update
[2025-02-25 12:30:11] 2025-02-25 17:29:51,642 | INFO     | total number of processed events: 400 (read)
[2025-02-25 12:30:11] 2025-02-25 17:29:51,645 | INFO     | executing command: lscpu
[2025-02-25 12:30:11] 2025-02-25 17:29:51,673 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 12:30:11] 2025-02-25 17:29:51,687 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 12:30:11] 2025-02-25 17:29:52,264 | INFO     | monitor loop #372: job 0:6530459298 is in state 'finished'
[2025-02-25 12:30:11] 2025-02-25 17:29:52,265 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 12:30:11] 2025-02-25 17:29:54,768 | INFO     | monitor loop #373: job 0:6530459298 is in state 'finished'
[2025-02-25 12:30:11] 2025-02-25 17:29:54,769 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 12:30:11] 2025-02-25 17:29:56,835 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 12:30:11] 2025-02-25 17:29:56,835 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530459298/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 12:30:11] 2025-02-25 17:29:56,837 | INFO     | extracted standard info from prmon json
[2025-02-25 12:30:11] 2025-02-25 17:29:56,837 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 12:30:11] 2025-02-25 17:29:56,837 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 12:30:11] 2025-02-25 17:29:56,838 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 12:30:11] 2025-02-25 17:29:56,838 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 12:30:11] 2025-02-25 17:29:56,841 | INFO     | fitting pss+swap vs Time
[2025-02-25 12:30:11] 2025-02-25 17:29:56,841 | INFO     | model: linear, x: [1740499863.0, 1740499924.0, 1740499985.0, 1740500046.0, 1740500107.0, 1740500168.0, 1740500229.0, 1740500290.0, 1740500351.0, 1740500412.0, 1740
[2025-02-25 12:30:11] 2025-02-25 17:29:56,841 | INFO     | sum of square deviations: 136095575.0
[2025-02-25 12:30:11] 2025-02-25 17:29:56,841 | INFO     | sum of deviations: 29112959368.999996
[2025-02-25 12:30:11] 2025-02-25 17:29:56,842 | INFO     | mean x: 1740502150.5
[2025-02-25 12:30:11] 2025-02-25 17:29:56,842 | INFO     | mean y: 2523248.6842105263
[2025-02-25 12:30:11] 2025-02-25 17:29:56,842 | INFO     | -- intersect: -372317946312.2373
[2025-02-25 12:30:11] 2025-02-25 17:29:56,842 | INFO     | intersect: -372317946312.2373
[2025-02-25 12:30:11] 2025-02-25 17:29:56,842 | INFO     | chi2: 2.444465292801496
[2025-02-25 12:30:11] 2025-02-25 17:29:56,842 | INFO     | -- intersect: -372317946312.2373
[2025-02-25 12:30:11] 2025-02-25 17:29:56,842 | INFO     | current memory leak: 213.92 B/s (using 76 data points, chi2=2.44)
[2025-02-25 12:30:11] 2025-02-25 17:29:56,843 | INFO     | ..............................
[2025-02-25 12:30:11] 2025-02-25 17:29:56,843 | INFO     | . Timing measurements:
[2025-02-25 12:30:11] 2025-02-25 17:29:56,843 | INFO     | . get job = 0 s
[2025-02-25 12:30:11] 2025-02-25 17:29:56,843 | INFO     | . initial setup = 2 s
[2025-02-25 12:30:11] 2025-02-25 17:29:56,843 | INFO     | . payload setup = 7 s
[2025-02-25 12:30:11] 2025-02-25 17:29:56,843 | INFO     | . stage-in = 0 s
[2025-02-25 12:30:11] 2025-02-25 17:29:56,843 | INFO     | . payload execution = 5031 s
[2025-02-25 12:30:11] 2025-02-25 17:29:56,844 | INFO     | . stage-out = 0 s
[2025-02-25 12:30:11] 2025-02-25 17:29:56,844 | INFO     | . log creation = 0 s
[2025-02-25 12:30:11] 2025-02-25 17:29:56,844 | INFO     | ..............................
[2025-02-25 12:30:11] 2025-02-25 17:29:56,929 | INFO     | 
[2025-02-25 12:30:11] 2025-02-25 17:29:56,929 | INFO     | job summary report
[2025-02-25 12:30:11] 2025-02-25 17:29:56,929 | INFO     | --------------------------------------------------
[2025-02-25 12:30:11] 2025-02-25 17:29:56,929 | INFO     | PanDA job id: 6530459298
[2025-02-25 12:30:11] 2025-02-25 17:29:56,929 | INFO     | task id: 43401121
[2025-02-25 12:30:11] 2025-02-25 17:29:56,930 | INFO     | errors: (none)
[2025-02-25 12:30:11] 2025-02-25 17:29:56,930 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 12:30:11] 2025-02-25 17:29:56,930 | INFO     | pilot state: finished 
[2025-02-25 12:30:11] 2025-02-25 17:29:56,930 | INFO     | transexitcode: 0
[2025-02-25 12:30:11] 2025-02-25 17:29:56,930 | INFO     | exeerrorcode: 0
[2025-02-25 12:30:11] 2025-02-25 17:29:56,930 | INFO     | exeerrordiag: 
[2025-02-25 12:30:11] 2025-02-25 17:29:56,931 | INFO     | exitcode: 0
[2025-02-25 12:30:11] 2025-02-25 17:29:56,931 | INFO     | exitmsg: OK
[2025-02-25 12:30:11] 2025-02-25 17:29:56,931 | INFO     | cpuconsumptiontime: 47801 s
[2025-02-25 12:30:11] 2025-02-25 17:29:56,931 | INFO     | nevents: 400
[2025-02-25 12:30:11] 2025-02-25 17:29:56,931 | INFO     | neventsw: 0
[2025-02-25 12:30:11] 2025-02-25 17:29:56,931 | INFO     | pid: 5470
[2025-02-25 12:30:11] 2025-02-25 17:29:56,932 | INFO     | pgrp: 5470
[2025-02-25 12:30:11] 2025-02-25 17:29:56,932 | INFO     | corecount: 12
[2025-02-25 12:30:11] 2025-02-25 17:29:56,932 | INFO     | event service: False
[2025-02-25 12:30:11] 2025-02-25 17:29:56,932 | INFO     | sizes: {0: 2376829, 1: 2376971, 6: 2377177, 11: 2377205, 5043: 2403342, 5045: 2412467, 5052: 2412581}
[2025-02-25 12:30:11] 2025-02-25 17:29:56,932 | INFO     | --------------------------------------------------
[2025-02-25 12:30:11] 2025-02-25 17:29:56,932 | INFO     | 
[2025-02-25 12:30:11] 2025-02-25 17:29:56,933 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 12:30:11] 2025-02-25 17:29:56,956 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 12:30:11] 2025-02-25 17:29:56,957 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 12:30:11] 2025-02-25 17:29:56,957 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 12:30:11] 2025-02-25 17:29:56,957 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 12:30:11] 2025-02-25 17:29:56,957 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 12:30:11] 2025-02-25 17:29:56,957 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 12:30:11] 2025-02-25 17:29:56,958 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 12:30:11] 2025-02-25 17:29:56,958 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 12:30:11] 2025-02-25 17:29:56,958 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 12:30:11] 2025-02-25 17:29:56,958 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 12:30:11] 2025-02-25 17:29:56,958 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 12:30:11] 2025-02-25 17:29:56,958 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 12:30:11] 2025-02-25 17:29:56,959 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 12:30:11] 2025-02-25 17:29:56,959 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 12:30:11] 2025-02-25 17:29:56,959 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 12:30:11] 2025-02-25 17:29:56,959 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 12:30:11] 2025-02-25 17:29:56,959 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 12:30:11] 2025-02-25 17:29:56,960 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 12:30:11] 2025-02-25 17:29:56,960 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 12:30:11] 2025-02-25 17:29:56,960 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 12:30:11] 2025-02-25 17:29:56,960 | INFO     | job 6530459298 has completed (purged errors)
[2025-02-25 12:30:11] 2025-02-25 17:29:56,960 | INFO     | overall cleanup function is called
[2025-02-25 12:30:11] 2025-02-25 17:29:57,968 | INFO     | --- collectZombieJob: --- 10, [5470]
[2025-02-25 12:30:11] 2025-02-25 17:29:57,969 | INFO     | zombie collector waiting for pid 5470
[2025-02-25 12:30:11] 2025-02-25 17:29:57,969 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 12:30:11] 2025-02-25 17:29:57,969 | INFO     | collected zombie processes
[2025-02-25 12:30:11] 2025-02-25 17:29:57,969 | INFO     | will attempt to kill all subprocesses of pid=5470
[2025-02-25 12:30:11] 2025-02-25 17:29:58,071 | INFO     | process IDs to be killed: [5470] (in reverse order)
[2025-02-25 12:30:11] 2025-02-25 17:29:58,124 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 12:30:11] 2025-02-25 17:29:58,124 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 12:30:11] 2025-02-25 17:29:58,128 | INFO     | did not find any defunct processes belonging to 5470
[2025-02-25 12:30:11] 2025-02-25 17:29:58,131 | INFO     | did not find any defunct processes belonging to 5470
[2025-02-25 12:30:11] 2025-02-25 17:29:58,131 | INFO     | ready for new job
[2025-02-25 12:30:11] 2025-02-25 17:29:58,131 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 12:30:11] 2025-02-25 17:29:58,133 | INFO     | **************************************
[2025-02-25 12:30:11] 2025-02-25 17:29:58,133 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 12:30:11] 2025-02-25 17:29:58,133 | INFO     | **************************************
[2025-02-25 12:30:11] 2025-02-25 17:29:58,133 | INFO     | 
[2025-02-25 12:30:11] 2025-02-25 17:29:58,134 | INFO     | architecture information:
[2025-02-25 12:30:11] 2025-02-25 17:29:58,134 | INFO     | executing command: cat /etc/os-release
[2025-02-25 12:30:11] 2025-02-25 17:29:58,149 | INFO     | cat /etc/os-release:
[2025-02-25 12:30:11] NAME="CentOS Linux"
[2025-02-25 12:30:11] VERSION="7 (Core)"
[2025-02-25 12:30:11] ID="centos"
[2025-02-25 12:30:11] ID_LIKE="rhel fedora"
[2025-02-25 12:30:11] VERSION_ID="7"
[2025-02-25 12:30:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 12:30:11] ANSI_COLOR="0;31"
[2025-02-25 12:30:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 12:30:11] HOME_URL="https://www.centos.org/"
[2025-02-25 12:30:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 12:30:11] 
[2025-02-25 12:30:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 12:30:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 12:30:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 12:30:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 12:30:11] 
[2025-02-25 12:30:11] 2025-02-25 17:29:58,150 | INFO     | **************************************
[2025-02-25 12:30:11] 2025-02-25 17:29:58,653 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 12:30:11] 2025-02-25 17:29:58,669 | INFO     | sufficient remaining disk space (29355933696 B)
[2025-02-25 12:30:11] 2025-02-25 17:29:58,669 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 12:30:11] 2025-02-25 17:29:58,670 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 12:30:11] 2025-02-25 17:29:58,670 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 12:30:11] 2025-02-25 17:29:58,670 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 12:30:11] 2025-02-25 17:29:58,671 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 12:30:11] 2025-02-25 17:29:58,671 | INFO     | aborting loop
[2025-02-25 12:30:11] 2025-02-25 17:29:59,010 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 12:30:11] 2025-02-25 17:29:59,012 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 12:30:11] 2025-02-25 17:29:59,012 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 12:30:11] 2025-02-25 17:29:59,159 | INFO     | all data control threads have been joined
[2025-02-25 12:30:11] 2025-02-25 17:29:59,656 | INFO     | all payload control threads have been joined
[2025-02-25 12:30:11] 2025-02-25 17:29:59,673 | INFO     | [job] job monitor thread has finished
[2025-02-25 12:30:11] 2025-02-25 17:29:59,675 | INFO     | [job] retrieve thread has finished
[2025-02-25 12:30:11] 2025-02-25 17:29:59,676 | INFO     | [job] queue monitor thread has finished
[2025-02-25 12:30:11] 2025-02-25 17:29:59,707 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 12:30:11] 2025-02-25 17:29:59,873 | INFO     | [payload] failed_post thread has finished
[2025-02-25 12:30:11] 2025-02-25 17:30:00,064 | INFO     | [data] copytool_in thread has finished
[2025-02-25 12:30:11] 2025-02-25 17:30:00,107 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 12:30:11] 2025-02-25 17:30:00,112 | INFO     | all job control threads have been joined
[2025-02-25 12:30:11] 2025-02-25 17:30:00,162 | INFO     | [data] control thread has finished
[2025-02-25 12:30:11] 2025-02-25 17:30:00,251 | INFO     | [payload] validate_post thread has finished
[2025-02-25 12:30:11] 2025-02-25 17:30:00,624 | INFO     | [job] validate thread has finished
[2025-02-25 12:30:11] 2025-02-25 17:30:00,661 | INFO     | [payload] control thread has finished
[2025-02-25 12:30:11] 2025-02-25 17:30:00,676 | INFO     | [data] copytool_out thread has finished
[2025-02-25 12:30:11] 2025-02-25 17:30:00,722 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 12:30:11] 2025-02-25 17:30:00,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 12:30:11] 2025-02-25 17:30:01,024 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 12:30:11] 2025-02-25 17:30:01,118 | INFO     | [job] control thread has finished
[2025-02-25 12:30:11] 2025-02-25 17:30:04,732 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 12:30:11] 2025-02-25 17:30:05,988 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140071577028416)>', '<ExcThread(monitor, started 140070493353728)>']
[2025-02-25 12:30:11] 2025-02-25 17:30:06,046 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 12:30:11] 2025-02-25 17:30:06,046 | INFO     | [monitor] control thread has ended
[2025-02-25 12:30:11] 2025-02-25 17:30:11,002 | INFO     | all workflow threads have been joined
[2025-02-25 12:30:11] 2025-02-25 17:30:11,002 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 12:30:11] 2025-02-25 17:30:11,003 | INFO     | traces error code: 0
[2025-02-25 12:30:11] 2025-02-25 17:30:11,003 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 12:30:11] 2025-02-25 17:30:11,114 [wrapper] ==== pilot stdout END ====
[2025-02-25 12:30:11] 2025-02-25 17:30:11,117 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 12:30:11] 2025-02-25 17:30:11,120 [wrapper] pilotpid: 31415
[2025-02-25 12:30:11] 2025-02-25 17:30:11,124 [wrapper] Pilot exit status: 0
[2025-02-25 12:30:11] 2025-02-25 17:30:11,140 [wrapper] pandaids: 6530459298
[2025-02-25 12:30:11] 2025-02-25 17:30:11,187 [wrapper] cleanup supervisor_pilot 27794 31416
[2025-02-25 12:30:11] 2025-02-25 17:30:11,191 [wrapper] Test setup, not cleaning
[2025-02-25 12:30:11] 2025-02-25 17:30:11,199 [wrapper] apfmon messages muted
[2025-02-25 12:30:11] 2025-02-25 17:30:11,203 [wrapper] ==== wrapper stdout END ====
[2025-02-25 12:30:11] 2025-02-25 17:30:11,206 [wrapper] ==== wrapper stderr END ====
[2025-02-25 12:30:11]  *** Error codes and diagnostics ***
[2025-02-25 12:30:11]     "exeErrorCode": 0,
[2025-02-25 12:30:11]     "exeErrorDiag": "",
[2025-02-25 12:30:11]     "pilotErrorCode": 0,
[2025-02-25 12:30:11]     "pilotErrorDiag": "",
[2025-02-25 12:30:11]  *** Listing of results directory ***
[2025-02-25 12:30:11] total 437548
[2025-02-25 12:30:11] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 09:02 pilot3.tar.gz
[2025-02-25 12:30:11] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 09:44 queuedata.json
[2025-02-25 12:30:11] -rwx------ 1 boincer umatlas     35865 Feb 25 09:44 runpilot2-wrapper.sh
[2025-02-25 12:30:11] -rw-r--r-- 1 boincer umatlas       100 Feb 25 11:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 12:30:11] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 11:05 run_atlas
[2025-02-25 12:30:11] -rw-r--r-- 1 boincer umatlas       105 Feb 25 11:05 job.xml
[2025-02-25 12:30:11] -rw-r--r-- 2 boincer umatlas 253351324 Feb 25 11:05 EVNT.43401119._000080.pool.root.1
[2025-02-25 12:30:11] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 11:05 start_atlas.sh
[2025-02-25 12:30:11] drwxrwx--x 2 boincer umatlas      4096 Feb 25 11:05 shared
[2025-02-25 12:30:11] -rw-r--r-- 2 boincer umatlas    503556 Feb 25 11:05 input.tar.gz
[2025-02-25 12:30:11] -rw-r--r-- 1 boincer umatlas         0 Feb 25 11:05 boinc_lockfile
[2025-02-25 12:30:11] -rw-r--r-- 1 boincer umatlas      2541 Feb 25 11:05 pandaJob.out
[2025-02-25 12:30:11] -rw------- 1 boincer umatlas       424 Feb 25 11:05 setup.sh.local
[2025-02-25 12:30:11] -rw------- 1 boincer umatlas    988282 Feb 25 11:05 agis_schedconf.cvmfs.json
[2025-02-25 12:30:11] -rw------- 1 boincer umatlas   1577983 Feb 25 11:05 agis_ddmendpoints.agis.ALL.json
[2025-02-25 12:30:11] drwx------ 4 boincer umatlas      4096 Feb 25 11:05 pilot3
[2025-02-25 12:30:11] -rw------- 1 boincer umatlas 189221813 Feb 25 12:29 HITS.43401121._001992.pool.root.1
[2025-02-25 12:30:11] -rw------- 1 boincer umatlas        95 Feb 25 12:29 pilot_heartbeat.json
[2025-02-25 12:30:11] -rw------- 1 boincer umatlas      1045 Feb 25 12:29 memory_monitor_summary.json
[2025-02-25 12:30:11] -rw-r--r-- 1 boincer umatlas       530 Feb 25 12:29 boinc_task_state.xml
[2025-02-25 12:30:11] -rw------- 1 boincer umatlas    367394 Feb 25 12:29 log.43401121._001992.job.log.tgz.1
[2025-02-25 12:30:11] -rw------- 1 boincer umatlas      7760 Feb 25 12:29 heartbeat.json
[2025-02-25 12:30:11] -rw-r--r-- 1 boincer umatlas      5866 Feb 25 12:30 init_data.xml
[2025-02-25 12:30:11] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 12:30 boinc_mmap_file
[2025-02-25 12:30:11] -rw-r--r-- 1 boincer umatlas        27 Feb 25 12:30 wrapper_checkpoint.txt
[2025-02-25 12:30:11] -rw------- 1 boincer umatlas      4215 Feb 25 12:30 pilotlog.txt
[2025-02-25 12:30:11] -rw------- 1 boincer umatlas    472510 Feb 25 12:30 log.43401121._001992.job.log.1
[2025-02-25 12:30:11] -rw------- 1 boincer umatlas       357 Feb 25 12:30 output.list
[2025-02-25 12:30:11] -rw-r--r-- 1 boincer umatlas       620 Feb 25 12:30 runtime_log
[2025-02-25 12:30:11] -rw------- 1 boincer umatlas    860160 Feb 25 12:30 result.tar.gz
[2025-02-25 12:30:11] -rw-r--r-- 1 boincer umatlas     11010 Feb 25 12:30 runtime_log.err
[2025-02-25 12:30:11] -rw------- 1 boincer umatlas       657 Feb 25 12:30 gk3KDmULB76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmgxfKDmKIt9pn.diag
[2025-02-25 12:30:11] -rw-r--r-- 1 boincer umatlas     21148 Feb 25 12:30 stderr.txt
[2025-02-25 12:30:11] HITS file was successfully produced:
[2025-02-25 12:30:11] -rw------- 1 boincer umatlas 189221813 Feb 25 12:29 shared/HITS.pool.root.1
[2025-02-25 12:30:11]  *** Contents of shared directory: ***
[2025-02-25 12:30:11] total 433556
[2025-02-25 12:30:11] -rw-r--r-- 2 boincer umatlas 253351324 Feb 25 11:05 ATLAS.root_0
[2025-02-25 12:30:11] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 11:05 start_atlas.sh
[2025-02-25 12:30:11] -rw-r--r-- 2 boincer umatlas    503556 Feb 25 11:05 input.tar.gz
[2025-02-25 12:30:11] -rw------- 1 boincer umatlas 189221813 Feb 25 12:29 HITS.pool.root.1
[2025-02-25 12:30:11] -rw------- 1 boincer umatlas    860160 Feb 25 12:30 result.tar.gz
12:30:13 (27797): run_atlas exited; CPU time 47734.078850
12:30:13 (27797): called boinc_finish(0)

</stderr_txt>
]]>

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