Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:58:53 (5892): wrapper (7.7.26015): starting
09:58:53 (5892): wrapper: running run_atlas (--nthreads 8)
[2025-02-25 09:58:53] Arguments: --nthreads 8
[2025-02-25 09:58:53] Threads: 8
[2025-02-25 09:58:53] Checking for CVMFS
[2025-02-25 09:58:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 09:58:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 09:58:54] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 09:58:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 09:58:54] 2.11.2.0 2811 60139 110616 143041 3 56 18150973 20275200 1 130560 0 19456410 99.976 7168458 34011 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 09:58:54] CVMFS is ok
[2025-02-25 09:58:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 09:58:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 09:58:54] Further information can be found at the LHC@home message board.
[2025-02-25 09:58:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 09:58:54] Checking for apptainer binary...
[2025-02-25 09:58:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 09:58:54] Running /usr/bin/apptainer --version
[2025-02-25 09:58:54] apptainer version 1.3.2-1.el7
[2025-02-25 09:58:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 09:58:55] c-204-12.aglt2.org
[2025-02-25 09:58:55] apptainer works
[2025-02-25 09:58:55] Set ATHENA_PROC_NUMBER=8
[2025-02-25 09:58:55] Set ATHENA_CORE_NUMBER=8
[2025-02-25 09:58:55] Starting ATLAS job with PandaID=6530434871
[2025-02-25 09:58:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 12:14:07]  *** The last 200 lines of the pilot log: ***
[2025-02-25 12:14:07] 2025-02-25 17:13:47,730 | INFO     | intersect: -6657184830.864456
[2025-02-25 12:14:07] 2025-02-25 17:13:47,731 | INFO     | chi2: 0.002603216332551426
[2025-02-25 12:14:07] 2025-02-25 17:13:47,731 | INFO     | current chi2=0.002603216332551426 (change=28.27900630590836 %)
[2025-02-25 12:14:07] 2025-02-25 17:13:47,731 | INFO     | model: linear, x: [1740497107.0, 1740497168.0, 1740497229.0, 1740497290.0, 1740497351.0, 1740497412.0, 1740497473.0, 1740497534.0, 1740497595.0, 1740497656.0, 1740
[2025-02-25 12:14:07] 2025-02-25 17:13:47,731 | INFO     | sum of square deviations: 379832238.0
[2025-02-25 12:14:07] 2025-02-25 17:13:47,732 | INFO     | sum of deviations: 1973055187.0000002
[2025-02-25 12:14:07] 2025-02-25 17:13:47,732 | INFO     | mean x: 1740500340.0
[2025-02-25 12:14:07] 2025-02-25 17:13:47,732 | INFO     | mean y: 2518976.196261682
[2025-02-25 12:14:07] 2025-02-25 17:13:47,732 | INFO     | -- intersect: -9038586228.286839
[2025-02-25 12:14:07] 2025-02-25 17:13:47,732 | INFO     | intersect: -9038586228.286839
[2025-02-25 12:14:07] 2025-02-25 17:13:47,732 | INFO     | chi2: 0.00045584461146022133
[2025-02-25 12:14:07] 2025-02-25 17:13:47,733 | INFO     | current chi2=0.00045584461146022133 (change=82.48917672495372 %)
[2025-02-25 12:14:07] 2025-02-25 17:13:47,733 | INFO     | model: linear, x: [1740497412.0, 1740497473.0, 1740497534.0, 1740497595.0, 1740497656.0, 1740497717.0, 1740497778.0, 1740497839.0, 1740497900.0, 1740497961.0, 1740
[2025-02-25 12:14:07] 2025-02-25 17:13:47,733 | INFO     | sum of square deviations: 329031285.5
[2025-02-25 12:14:07] 2025-02-25 17:13:47,733 | INFO     | sum of deviations: 1507462499.9999998
[2025-02-25 12:14:07] 2025-02-25 17:13:47,733 | INFO     | mean x: 1740500492.5
[2025-02-25 12:14:07] 2025-02-25 17:13:47,734 | INFO     | mean y: 2520373.8039215687
[2025-02-25 12:14:07] 2025-02-25 17:13:47,734 | INFO     | -- intersect: -7971612601.691751
[2025-02-25 12:14:07] 2025-02-25 17:13:47,734 | INFO     | intersect: -7971612601.691751
[2025-02-25 12:14:07] 2025-02-25 17:13:47,734 | INFO     | chi2: 0.0003082869017137232
[2025-02-25 12:14:07] 2025-02-25 17:13:47,734 | INFO     | current chi2=0.0003082869017137232 (change=32.37017747644793 %)
[2025-02-25 12:14:07] 2025-02-25 17:13:47,734 | INFO     | model: linear, x: [1740497717.0, 1740497778.0, 1740497839.0, 1740497900.0, 1740497961.0, 1740498022.0, 1740498083.0, 1740498144.0, 1740498205.0, 1740498266.0, 1740
[2025-02-25 12:14:07] 2025-02-25 17:13:47,735 | INFO     | sum of square deviations: 282974608.0
[2025-02-25 12:14:07] 2025-02-25 17:13:47,735 | INFO     | sum of deviations: 1109362226.0
[2025-02-25 12:14:07] 2025-02-25 17:13:47,735 | INFO     | mean x: 1740500645.0
[2025-02-25 12:14:07] 2025-02-25 17:13:47,735 | INFO     | mean y: 2521690.0
[2025-02-25 12:14:07] 2025-02-25 17:13:47,735 | INFO     | -- intersect: -6820866753.006999
[2025-02-25 12:14:07] 2025-02-25 17:13:47,736 | INFO     | intersect: -6820866753.006999
[2025-02-25 12:14:07] 2025-02-25 17:13:47,736 | INFO     | chi2: 0.00016550419223049147
[2025-02-25 12:14:07] 2025-02-25 17:13:47,736 | INFO     | current chi2=0.00016550419223049147 (change=46.31488029154754 %)
[2025-02-25 12:14:07] 2025-02-25 17:13:47,736 | INFO     | model: linear, x: [1740498022.0, 1740498083.0, 1740498144.0, 1740498205.0, 1740498266.0, 1740498327.0, 1740498388.0, 1740498449.0, 1740498510.0, 1740498571.0, 1740
[2025-02-25 12:14:07] 2025-02-25 17:13:47,736 | INFO     | sum of square deviations: 241429643.0
[2025-02-25 12:14:07] 2025-02-25 17:13:47,737 | INFO     | sum of deviations: 819844391.9999999
[2025-02-25 12:14:07] 2025-02-25 17:13:47,737 | INFO     | mean x: 1740500797.5
[2025-02-25 12:14:07] 2025-02-25 17:13:47,737 | INFO     | mean y: 2522747.695652174
[2025-02-25 12:14:07] 2025-02-25 17:13:47,737 | INFO     | -- intersect: -5907852632.770376
[2025-02-25 12:14:07] 2025-02-25 17:13:47,737 | INFO     | intersect: -5907852632.770376
[2025-02-25 12:14:07] 2025-02-25 17:13:47,737 | INFO     | chi2: 8.386593898464321e-05
[2025-02-25 12:14:07] 2025-02-25 17:13:47,738 | INFO     | current chi2=8.386593898464321e-05 (change=49.32700020803929 %)
[2025-02-25 12:14:07] 2025-02-25 17:13:47,738 | INFO     | model: linear, x: [1740498327.0, 1740498388.0, 1740498449.0, 1740498510.0, 1740498571.0, 1740498632.0, 1740498693.0, 1740498754.0, 1740498815.0, 1740498876.0, 1740
[2025-02-25 12:14:07] 2025-02-25 17:13:47,738 | INFO     | sum of square deviations: 204163828.0
[2025-02-25 12:14:07] 2025-02-25 17:13:47,738 | INFO     | sum of deviations: 696140418.0000001
[2025-02-25 12:14:07] 2025-02-25 17:13:47,738 | INFO     | mean x: 1740500950.0
[2025-02-25 12:14:07] 2025-02-25 17:13:47,739 | INFO     | mean y: 2523249.8160919542
[2025-02-25 12:14:07] 2025-02-25 17:13:47,739 | INFO     | -- intersect: -5932088530.985732
[2025-02-25 12:14:07] 2025-02-25 17:13:47,739 | INFO     | intersect: -5932088530.985732
[2025-02-25 12:14:07] 2025-02-25 17:13:47,739 | INFO     | chi2: 7.848185549515446e-05
[2025-02-25 12:14:07] 2025-02-25 17:13:47,739 | INFO     | current chi2=7.848185549515446e-05 (change=6.419869084724174 %)
[2025-02-25 12:14:07] 2025-02-25 17:13:47,739 | INFO     | left removable region: 90
[2025-02-25 12:14:07] 2025-02-25 17:13:47,739 | INFO     | model: linear, x: [1740501072.0, 1740501133.0, 1740501194.0, 1740501255.0, 1740501316.0, 1740501377.0, 1740501438.0, 1740501499.0, 1740501560.0, 1740501621.0, 1740
[2025-02-25 12:14:07] 2025-02-25 17:13:47,740 | INFO     | sum of square deviations: 14456085.0
[2025-02-25 12:14:07] 2025-02-25 17:13:47,740 | INFO     | sum of deviations: 104611767.0
[2025-02-25 12:14:07] 2025-02-25 17:13:47,740 | INFO     | mean x: 1740502139.5
[2025-02-25 12:14:07] 2025-02-25 17:13:47,740 | INFO     | mean y: 2527024.9444444445
[2025-02-25 12:14:07] 2025-02-25 17:13:47,740 | INFO     | -- intersect: -12592653778.182785
[2025-02-25 12:14:07] 2025-02-25 17:13:47,740 | INFO     | intersect: -12592653778.182785
[2025-02-25 12:14:07] 2025-02-25 17:13:47,740 | INFO     | chi2: 1.1120362725956034e-05
[2025-02-25 12:14:07] 2025-02-25 17:13:47,741 | INFO     | -- intersect: -12592653778.182785
[2025-02-25 12:14:07] 2025-02-25 17:13:47,741 | INFO     | current memory leak: 7.24 B/s (using 36 data points, chi2=0.00)
[2025-02-25 12:14:07] 2025-02-25 17:13:47,741 | INFO     | ..............................
[2025-02-25 12:14:07] 2025-02-25 17:13:47,741 | INFO     | . Timing measurements:
[2025-02-25 12:14:07] 2025-02-25 17:13:47,741 | INFO     | . get job = 0 s
[2025-02-25 12:14:07] 2025-02-25 17:13:47,741 | INFO     | . initial setup = 2 s
[2025-02-25 12:14:07] 2025-02-25 17:13:47,742 | INFO     | . payload setup = 8 s
[2025-02-25 12:14:07] 2025-02-25 17:13:47,742 | INFO     | . stage-in = 0 s
[2025-02-25 12:14:07] 2025-02-25 17:13:47,742 | INFO     | . payload execution = 8039 s
[2025-02-25 12:14:07] 2025-02-25 17:13:47,742 | INFO     | . stage-out = 0 s
[2025-02-25 12:14:07] 2025-02-25 17:13:47,742 | INFO     | . log creation = 0 s
[2025-02-25 12:14:07] 2025-02-25 17:13:47,742 | INFO     | ..............................
[2025-02-25 12:14:07] 2025-02-25 17:13:48,030 | INFO     | 
[2025-02-25 12:14:07] 2025-02-25 17:13:48,030 | INFO     | job summary report
[2025-02-25 12:14:07] 2025-02-25 17:13:48,030 | INFO     | --------------------------------------------------
[2025-02-25 12:14:07] 2025-02-25 17:13:48,030 | INFO     | PanDA job id: 6530434871
[2025-02-25 12:14:07] 2025-02-25 17:13:48,031 | INFO     | task id: 43401163
[2025-02-25 12:14:07] 2025-02-25 17:13:48,031 | INFO     | errors: (none)
[2025-02-25 12:14:07] 2025-02-25 17:13:48,031 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 12:14:07] 2025-02-25 17:13:48,031 | INFO     | pilot state: finished 
[2025-02-25 12:14:07] 2025-02-25 17:13:48,031 | INFO     | transexitcode: 0
[2025-02-25 12:14:07] 2025-02-25 17:13:48,032 | INFO     | exeerrorcode: 0
[2025-02-25 12:14:07] 2025-02-25 17:13:48,032 | INFO     | exeerrordiag: 
[2025-02-25 12:14:07] 2025-02-25 17:13:48,032 | INFO     | exitcode: 0
[2025-02-25 12:14:07] 2025-02-25 17:13:48,032 | INFO     | exitmsg: OK
[2025-02-25 12:14:07] 2025-02-25 17:13:48,032 | INFO     | cpuconsumptiontime: 56337 s
[2025-02-25 12:14:07] 2025-02-25 17:13:48,032 | INFO     | nevents: 400
[2025-02-25 12:14:07] 2025-02-25 17:13:48,033 | INFO     | neventsw: 0
[2025-02-25 12:14:07] 2025-02-25 17:13:48,033 | INFO     | pid: 15904
[2025-02-25 12:14:07] 2025-02-25 17:13:48,033 | INFO     | pgrp: 15904
[2025-02-25 12:14:07] 2025-02-25 17:13:48,033 | INFO     | corecount: 8
[2025-02-25 12:14:07] 2025-02-25 17:13:48,033 | INFO     | event service: False
[2025-02-25 12:14:07] 2025-02-25 17:13:48,033 | INFO     | sizes: {0: 2376939, 6: 2377145, 11: 2377173, 8051: 2404676, 8053: 2413673, 8060: 2413787}
[2025-02-25 12:14:07] 2025-02-25 17:13:48,034 | INFO     | --------------------------------------------------
[2025-02-25 12:14:07] 2025-02-25 17:13:48,034 | INFO     | 
[2025-02-25 12:14:07] 2025-02-25 17:13:48,034 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 12:14:07] 2025-02-25 17:13:48,062 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 12:14:07] 2025-02-25 17:13:48,063 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 12:14:07] 2025-02-25 17:13:48,063 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 12:14:07] 2025-02-25 17:13:48,063 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 12:14:07] 2025-02-25 17:13:48,063 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 12:14:07] 2025-02-25 17:13:48,063 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 12:14:07] 2025-02-25 17:13:48,064 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 12:14:07] 2025-02-25 17:13:48,064 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 12:14:07] 2025-02-25 17:13:48,064 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 12:14:07] 2025-02-25 17:13:48,064 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 12:14:07] 2025-02-25 17:13:48,064 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 12:14:07] 2025-02-25 17:13:48,064 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 12:14:07] 2025-02-25 17:13:48,065 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 12:14:07] 2025-02-25 17:13:48,065 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 12:14:07] 2025-02-25 17:13:48,065 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 12:14:07] 2025-02-25 17:13:48,065 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 12:14:07] 2025-02-25 17:13:48,065 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 12:14:07] 2025-02-25 17:13:48,065 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 12:14:07] 2025-02-25 17:13:48,066 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 12:14:07] 2025-02-25 17:13:48,066 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 12:14:07] 2025-02-25 17:13:48,066 | INFO     | job 6530434871 has completed (purged errors)
[2025-02-25 12:14:07] 2025-02-25 17:13:48,066 | INFO     | overall cleanup function is called
[2025-02-25 12:14:07] 2025-02-25 17:13:49,074 | INFO     | --- collectZombieJob: --- 10, [15904]
[2025-02-25 12:14:07] 2025-02-25 17:13:49,075 | INFO     | zombie collector waiting for pid 15904
[2025-02-25 12:14:07] 2025-02-25 17:13:49,075 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 12:14:07] 2025-02-25 17:13:49,075 | INFO     | collected zombie processes
[2025-02-25 12:14:07] 2025-02-25 17:13:49,075 | INFO     | will attempt to kill all subprocesses of pid=15904
[2025-02-25 12:14:07] 2025-02-25 17:13:49,150 | INFO     | process IDs to be killed: [15904] (in reverse order)
[2025-02-25 12:14:07] 2025-02-25 17:13:49,206 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 12:14:07] 2025-02-25 17:13:49,207 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 12:14:07] 2025-02-25 17:13:49,211 | INFO     | did not find any defunct processes belonging to 15904
[2025-02-25 12:14:07] 2025-02-25 17:13:49,213 | INFO     | did not find any defunct processes belonging to 15904
[2025-02-25 12:14:07] 2025-02-25 17:13:49,214 | INFO     | ready for new job
[2025-02-25 12:14:07] 2025-02-25 17:13:49,214 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 12:14:07] 2025-02-25 17:13:49,216 | INFO     | **************************************
[2025-02-25 12:14:07] 2025-02-25 17:13:49,216 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 12:14:07] 2025-02-25 17:13:49,216 | INFO     | **************************************
[2025-02-25 12:14:07] 2025-02-25 17:13:49,216 | INFO     | 
[2025-02-25 12:14:07] 2025-02-25 17:13:49,216 | INFO     | architecture information:
[2025-02-25 12:14:07] 2025-02-25 17:13:49,217 | INFO     | executing command: cat /etc/os-release
[2025-02-25 12:14:07] 2025-02-25 17:13:49,236 | INFO     | cat /etc/os-release:
[2025-02-25 12:14:07] NAME="CentOS Linux"
[2025-02-25 12:14:07] VERSION="7 (Core)"
[2025-02-25 12:14:07] ID="centos"
[2025-02-25 12:14:07] ID_LIKE="rhel fedora"
[2025-02-25 12:14:07] VERSION_ID="7"
[2025-02-25 12:14:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 12:14:07] ANSI_COLOR="0;31"
[2025-02-25 12:14:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 12:14:07] HOME_URL="https://www.centos.org/"
[2025-02-25 12:14:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 12:14:07] 
[2025-02-25 12:14:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 12:14:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 12:14:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 12:14:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 12:14:07] 
[2025-02-25 12:14:07] 2025-02-25 17:13:49,236 | INFO     | **************************************
[2025-02-25 12:14:07] 2025-02-25 17:13:49,739 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 12:14:07] 2025-02-25 17:13:49,760 | INFO     | sufficient remaining disk space (18577620992 B)
[2025-02-25 12:14:07] 2025-02-25 17:13:49,760 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 12:14:07] 2025-02-25 17:13:49,760 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 12:14:07] 2025-02-25 17:13:49,761 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 12:14:07] 2025-02-25 17:13:49,761 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 12:14:07] 2025-02-25 17:13:49,910 | INFO     | all data control threads have been joined
[2025-02-25 12:14:07] 2025-02-25 17:13:50,071 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 12:14:07] 2025-02-25 17:13:50,071 | INFO     | aborting loop
[2025-02-25 12:14:07] 2025-02-25 17:13:50,555 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 12:14:07] 2025-02-25 17:13:50,557 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 12:14:07] 2025-02-25 17:13:50,557 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 12:14:07] 2025-02-25 17:13:50,733 | INFO     | all payload control threads have been joined
[2025-02-25 12:14:07] 2025-02-25 17:13:50,766 | INFO     | [job] retrieve thread has finished
[2025-02-25 12:14:07] 2025-02-25 17:13:50,767 | INFO     | [job] queue monitor thread has finished
[2025-02-25 12:14:07] 2025-02-25 17:13:50,787 | INFO     | all job control threads have been joined
[2025-02-25 12:14:07] 2025-02-25 17:13:50,792 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 12:14:07] 2025-02-25 17:13:50,806 | INFO     | [data] copytool_in thread has finished
[2025-02-25 12:14:07] 2025-02-25 17:13:50,910 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 12:14:07] 2025-02-25 17:13:50,916 | INFO     | [data] control thread has finished
[2025-02-25 12:14:07] 2025-02-25 17:13:51,074 | INFO     | [job] job monitor thread has finished
[2025-02-25 12:14:07] 2025-02-25 17:13:51,420 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 12:14:07] 2025-02-25 17:13:51,696 | INFO     | [payload] validate_post thread has finished
[2025-02-25 12:14:07] 2025-02-25 17:13:51,696 | INFO     | [payload] failed_post thread has finished
[2025-02-25 12:14:07] 2025-02-25 17:13:51,739 | INFO     | [payload] control thread has finished
[2025-02-25 12:14:07] 2025-02-25 17:13:51,765 | INFO     | [data] copytool_out thread has finished
[2025-02-25 12:14:07] 2025-02-25 17:13:51,793 | INFO     | [job] control thread has finished
[2025-02-25 12:14:07] 2025-02-25 17:13:51,795 | INFO     | [job] validate thread has finished
[2025-02-25 12:14:07] 2025-02-25 17:13:52,093 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 12:14:07] 2025-02-25 17:13:55,427 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 12:14:07] 2025-02-25 17:13:59,991 | INFO     | job.realtimelogging is not enabled
[2025-02-25 12:14:07] 2025-02-25 17:14:00,997 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 12:14:07] 2025-02-25 17:14:02,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140341889075008)>', '<ExcThread(monitor, started 140340916897536)>']
[2025-02-25 12:14:07] 2025-02-25 17:14:02,616 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 12:14:07] 2025-02-25 17:14:02,617 | INFO     | [monitor] control thread has ended
[2025-02-25 12:14:07] 2025-02-25 17:14:07,236 | INFO     | all workflow threads have been joined
[2025-02-25 12:14:07] 2025-02-25 17:14:07,236 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 12:14:07] 2025-02-25 17:14:07,237 | INFO     | traces error code: 0
[2025-02-25 12:14:07] 2025-02-25 17:14:07,238 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 12:14:07] 2025-02-25 17:14:07,371 [wrapper] ==== pilot stdout END ====
[2025-02-25 12:14:07] 2025-02-25 17:14:07,376 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 12:14:07] 2025-02-25 17:14:07,380 [wrapper] pilotpid: 9529
[2025-02-25 12:14:07] 2025-02-25 17:14:07,385 [wrapper] Pilot exit status: 0
[2025-02-25 12:14:07] 2025-02-25 17:14:07,404 [wrapper] pandaids: 6530434871
[2025-02-25 12:14:07] 2025-02-25 17:14:07,454 [wrapper] cleanup supervisor_pilot 27576 9530
[2025-02-25 12:14:07] 2025-02-25 17:14:07,458 [wrapper] Test setup, not cleaning
[2025-02-25 12:14:07] 2025-02-25 17:14:07,467 [wrapper] apfmon messages muted
[2025-02-25 12:14:07] 2025-02-25 17:14:07,471 [wrapper] ==== wrapper stdout END ====
[2025-02-25 12:14:07] 2025-02-25 17:14:07,476 [wrapper] ==== wrapper stderr END ====
[2025-02-25 12:14:07]  *** Error codes and diagnostics ***
[2025-02-25 12:14:07]     "exeErrorCode": 0,
[2025-02-25 12:14:07]     "exeErrorDiag": "",
[2025-02-25 12:14:07]     "pilotErrorCode": 0,
[2025-02-25 12:14:07]     "pilotErrorDiag": "",
[2025-02-25 12:14:07]  *** Listing of results directory ***
[2025-02-25 12:14:07] total 438588
[2025-02-25 12:14:07] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 09:02 pilot3.tar.gz
[2025-02-25 12:14:07] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 09:29 queuedata.json
[2025-02-25 12:14:07] -rwx------ 1 boincer umatlas     35865 Feb 25 09:29 runpilot2-wrapper.sh
[2025-02-25 12:14:07] -rw-r--r-- 1 boincer umatlas       100 Feb 25 09:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 12:14:07] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 09:58 run_atlas
[2025-02-25 12:14:07] -rw-r--r-- 1 boincer umatlas       105 Feb 25 09:58 job.xml
[2025-02-25 12:14:07] -rw-r--r-- 2 boincer umatlas 254629338 Feb 25 09:58 EVNT.43401161._000025.pool.root.1
[2025-02-25 12:14:07] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 09:58 start_atlas.sh
[2025-02-25 12:14:07] drwxrwx--x 2 boincer umatlas      4096 Feb 25 09:58 shared
[2025-02-25 12:14:07] -rw-r--r-- 2 boincer umatlas    503545 Feb 25 09:58 input.tar.gz
[2025-02-25 12:14:07] -rw-r--r-- 1 boincer umatlas         0 Feb 25 09:58 boinc_lockfile
[2025-02-25 12:14:07] -rw-r--r-- 1 boincer umatlas      2539 Feb 25 09:58 pandaJob.out
[2025-02-25 12:14:07] -rw------- 1 boincer umatlas       424 Feb 25 09:58 setup.sh.local
[2025-02-25 12:14:07] -rw------- 1 boincer umatlas    988282 Feb 25 09:59 agis_schedconf.cvmfs.json
[2025-02-25 12:14:07] -rw------- 1 boincer umatlas   1577983 Feb 25 09:59 agis_ddmendpoints.agis.ALL.json
[2025-02-25 12:14:07] drwx------ 4 boincer umatlas      4096 Feb 25 09:59 pilot3
[2025-02-25 12:14:07] -rw-r--r-- 1 boincer umatlas      5825 Feb 25 12:12 init_data.xml
[2025-02-25 12:14:07] -rw------- 1 boincer umatlas        95 Feb 25 12:13 pilot_heartbeat.json
[2025-02-25 12:14:07] -rw------- 1 boincer umatlas 188398535 Feb 25 12:13 HITS.43401163._000625.pool.root.1
[2025-02-25 12:14:07] -rw-r--r-- 1 boincer umatlas       529 Feb 25 12:13 boinc_task_state.xml
[2025-02-25 12:14:07] -rw------- 1 boincer umatlas      1049 Feb 25 12:13 memory_monitor_summary.json
[2025-02-25 12:14:07] -rw------- 1 boincer umatlas    355409 Feb 25 12:13 log.43401163._000625.job.log.tgz.1
[2025-02-25 12:14:07] -rw------- 1 boincer umatlas      7758 Feb 25 12:13 heartbeat.json
[2025-02-25 12:14:07] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 12:13 boinc_mmap_file
[2025-02-25 12:14:07] -rw-r--r-- 1 boincer umatlas        27 Feb 25 12:13 wrapper_checkpoint.txt
[2025-02-25 12:14:07] -rw------- 1 boincer umatlas      4287 Feb 25 12:14 pilotlog.txt
[2025-02-25 12:14:07] -rw------- 1 boincer umatlas    789929 Feb 25 12:14 log.43401163._000625.job.log.1
[2025-02-25 12:14:07] -rw------- 1 boincer umatlas       357 Feb 25 12:14 output.list
[2025-02-25 12:14:07] -rw-r--r-- 1 boincer umatlas       620 Feb 25 12:14 runtime_log
[2025-02-25 12:14:07] -rw------- 1 boincer umatlas   1167360 Feb 25 12:14 result.tar.gz
[2025-02-25 12:14:07] -rw-r--r-- 1 boincer umatlas     11013 Feb 25 12:14 runtime_log.err
[2025-02-25 12:14:07] -rw------- 1 boincer umatlas       659 Feb 25 12:14 3G3LDmX7A76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmMjwKDmadyk5m.diag
[2025-02-25 12:14:07] -rw-r--r-- 1 boincer umatlas     21503 Feb 25 12:14 stderr.txt
[2025-02-25 12:14:07] HITS file was successfully produced:
[2025-02-25 12:14:07] -rw------- 1 boincer umatlas 188398535 Feb 25 12:13 shared/HITS.pool.root.1
[2025-02-25 12:14:07]  *** Contents of shared directory: ***
[2025-02-25 12:14:07] total 434300
[2025-02-25 12:14:07] -rw-r--r-- 2 boincer umatlas 254629338 Feb 25 09:58 ATLAS.root_0
[2025-02-25 12:14:07] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 09:58 start_atlas.sh
[2025-02-25 12:14:07] -rw-r--r-- 2 boincer umatlas    503545 Feb 25 09:58 input.tar.gz
[2025-02-25 12:14:07] -rw------- 1 boincer umatlas 188398535 Feb 25 12:13 HITS.pool.root.1
[2025-02-25 12:14:07] -rw------- 1 boincer umatlas   1167360 Feb 25 12:14 result.tar.gz
12:14:08 (5892): run_atlas exited; CPU time 56171.855247
12:14:08 (5892): called boinc_finish(0)

</stderr_txt>
]]>

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