Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:46:10 (16855): wrapper (7.7.26015): starting
09:46:10 (16855): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 09:46:10] Arguments: --nthreads 12
[2025-02-25 09:46:10] Threads: 12
[2025-02-25 09:46:10] Checking for CVMFS
[2025-02-25 09:46:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 09:46:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 09:46:10] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 09:46:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 09:46:10] 2.11.2.0 24956 293956 152712 143041 0 56 18073179 20275201 1 130560 0 24141272 99.979 7857969 44233 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 09:46:10] CVMFS is ok
[2025-02-25 09:46:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 09:46:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 09:46:10] Further information can be found at the LHC@home message board.
[2025-02-25 09:46:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 09:46:10] Checking for apptainer binary...
[2025-02-25 09:46:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 09:46:10] Running /usr/bin/apptainer --version
[2025-02-25 09:46:10] apptainer version 1.3.2-1.el7
[2025-02-25 09:46:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 09:46:11] c-205-8.aglt2.org
[2025-02-25 09:46:11] apptainer works
[2025-02-25 09:46:12] Set ATHENA_PROC_NUMBER=12
[2025-02-25 09:46:12] Set ATHENA_CORE_NUMBER=12
[2025-02-25 09:46:12] Starting ATLAS job with PandaID=6530433764
[2025-02-25 09:46:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 11:10:00]  *** The last 200 lines of the pilot log: ***
[2025-02-25 11:10:00]  is_altstaged=None
[2025-02-25 11:10:00]  is_tar=False
[2025-02-25 11:10:00]  lfn=log.43401163._000316.job.log.tgz.1
[2025-02-25 11:10:00]  mtime=0
[2025-02-25 11:10:00]  protocol_id=None
[2025-02-25 11:10:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 11:10:00]  replicas=None
[2025-02-25 11:10:00]  scope=mc23_13p6TeV
[2025-02-25 11:10:00]  status=None
[2025-02-25 11:10:00]  status_code=0
[2025-02-25 11:10:00]  storage_token=
[2025-02-25 11:10:00]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530433764/log.43401163._000316.job.log.tgz.1
[2025-02-25 11:10:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/46/log.43401163._000316.job.log.tgz.1
[2025-02-25 11:10:00]  workdir=None
[2025-02-25 11:10:00] ]
[2025-02-25 11:10:00] 2025-02-25 16:09:30,569 | INFO     | transferring file log.43401163._000316.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530433764/log.43401163._000316.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 11:10:00] 2025-02-25 16:09:30,569 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530433764/log.43401163._000316.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401163._000316.job
[2025-02-25 11:10:00] 2025-02-25 16:09:30,590 | INFO     | adding to output.list: log.43401163._000316.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/46/log.43401163._000316.job.log.tg
[2025-02-25 11:10:00] 2025-02-25 16:09:30,591 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 11:10:00] 2025-02-25 16:09:30,591 | INFO     | summary of transferred files:
[2025-02-25 11:10:00] 2025-02-25 16:09:30,591 | INFO     |  -- lfn=log.43401163._000316.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 11:10:00] 2025-02-25 16:09:30,592 | INFO     | stage-out finished correctly
[2025-02-25 11:10:00] 2025-02-25 16:09:32,927 | INFO     | monitor loop #367: job 0:6530433764 is in state 'finished'
[2025-02-25 11:10:00] 2025-02-25 16:09:32,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 11:10:00] 2025-02-25 16:09:33,326 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 11:10:00] 2025-02-25 16:09:33,847 | INFO     | PID=20455 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-25 11:10:00] 2025-02-25 16:09:35,280 | INFO     | job 6530433764 has state=finished
[2025-02-25 11:10:00] 2025-02-25 16:09:35,281 | INFO     | preparing for final server update for job 6530433764 in state='finished'
[2025-02-25 11:10:00] 2025-02-25 16:09:35,287 | INFO     | this job has now completed (state=finished)
[2025-02-25 11:10:00] 2025-02-25 16:09:35,288 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 11:10:00] 2025-02-25 16:09:35,288 | INFO     | log transfer has been attempted: DONE
[2025-02-25 11:10:00] 2025-02-25 16:09:35,288 | INFO     | job 6530433764 has finished - writing final server update
[2025-02-25 11:10:00] 2025-02-25 16:09:35,289 | INFO     | total number of processed events: 400 (read)
[2025-02-25 11:10:00] 2025-02-25 16:09:35,291 | INFO     | executing command: lscpu
[2025-02-25 11:10:00] 2025-02-25 16:09:35,316 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 11:10:00] 2025-02-25 16:09:35,330 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 11:10:00] 2025-02-25 16:09:35,431 | INFO     | monitor loop #368: job 0:6530433764 is in state 'finished'
[2025-02-25 11:10:00] 2025-02-25 16:09:35,431 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 11:10:00] 2025-02-25 16:09:37,934 | INFO     | monitor loop #369: job 0:6530433764 is in state 'finished'
[2025-02-25 11:10:00] 2025-02-25 16:09:37,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 11:10:00] 2025-02-25 16:09:40,277 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 11:10:00] 2025-02-25 16:09:40,278 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530433764/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 11:10:00] 2025-02-25 16:09:40,279 | INFO     | extracted standard info from prmon json
[2025-02-25 11:10:00] 2025-02-25 16:09:40,279 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 11:10:00] 2025-02-25 16:09:40,279 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 11:10:00] 2025-02-25 16:09:40,280 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 11:10:00] 2025-02-25 16:09:40,280 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 11:10:00] 2025-02-25 16:09:40,282 | INFO     | fitting pss+swap vs Time
[2025-02-25 11:10:00] 2025-02-25 16:09:40,282 | INFO     | model: linear, x: [1740495118.0, 1740495179.0, 1740495240.0, 1740495301.0, 1740495362.0, 1740495423.0, 1740495484.0, 1740495545.0, 1740495606.0, 1740495667.0, 1740
[2025-02-25 11:10:00] 2025-02-25 16:09:40,292 | INFO     | sum of square deviations: 130793150.0
[2025-02-25 11:10:00] 2025-02-25 16:09:40,293 | INFO     | sum of deviations: 20486893676.000004
[2025-02-25 11:10:00] 2025-02-25 16:09:40,293 | INFO     | mean x: 1740497375.0
[2025-02-25 11:10:00] 2025-02-25 16:09:40,293 | INFO     | mean y: 2578164.6266666665
[2025-02-25 11:10:00] 2025-02-25 16:09:40,293 | INFO     | -- intersect: -272621673678.7008
[2025-02-25 11:10:00] 2025-02-25 16:09:40,293 | INFO     | intersect: -272621673678.7008
[2025-02-25 11:10:00] 2025-02-25 16:09:40,293 | INFO     | chi2: 2.093808211629978
[2025-02-25 11:10:00] 2025-02-25 16:09:40,293 | INFO     | -- intersect: -272621673678.7008
[2025-02-25 11:10:00] 2025-02-25 16:09:40,294 | INFO     | current memory leak: 156.64 B/s (using 75 data points, chi2=2.09)
[2025-02-25 11:10:00] 2025-02-25 16:09:40,294 | INFO     | ..............................
[2025-02-25 11:10:00] 2025-02-25 16:09:40,294 | INFO     | . Timing measurements:
[2025-02-25 11:10:00] 2025-02-25 16:09:40,294 | INFO     | . get job = 0 s
[2025-02-25 11:10:00] 2025-02-25 16:09:40,294 | INFO     | . initial setup = 2 s
[2025-02-25 11:10:00] 2025-02-25 16:09:40,295 | INFO     | . payload setup = 7 s
[2025-02-25 11:10:00] 2025-02-25 16:09:40,295 | INFO     | . stage-in = 0 s
[2025-02-25 11:10:00] 2025-02-25 16:09:40,295 | INFO     | . payload execution = 4957 s
[2025-02-25 11:10:00] 2025-02-25 16:09:40,295 | INFO     | . stage-out = 0 s
[2025-02-25 11:10:00] 2025-02-25 16:09:40,295 | INFO     | . log creation = 0 s
[2025-02-25 11:10:00] 2025-02-25 16:09:40,295 | INFO     | ..............................
[2025-02-25 11:10:00] 2025-02-25 16:09:40,389 | INFO     | 
[2025-02-25 11:10:00] 2025-02-25 16:09:40,389 | INFO     | job summary report
[2025-02-25 11:10:00] 2025-02-25 16:09:40,390 | INFO     | --------------------------------------------------
[2025-02-25 11:10:00] 2025-02-25 16:09:40,390 | INFO     | PanDA job id: 6530433764
[2025-02-25 11:10:00] 2025-02-25 16:09:40,390 | INFO     | task id: 43401163
[2025-02-25 11:10:00] 2025-02-25 16:09:40,390 | INFO     | errors: (none)
[2025-02-25 11:10:00] 2025-02-25 16:09:40,390 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 11:10:00] 2025-02-25 16:09:40,391 | INFO     | pilot state: finished 
[2025-02-25 11:10:00] 2025-02-25 16:09:40,391 | INFO     | transexitcode: 0
[2025-02-25 11:10:00] 2025-02-25 16:09:40,391 | INFO     | exeerrorcode: 0
[2025-02-25 11:10:00] 2025-02-25 16:09:40,391 | INFO     | exeerrordiag: 
[2025-02-25 11:10:00] 2025-02-25 16:09:40,391 | INFO     | exitcode: 0
[2025-02-25 11:10:00] 2025-02-25 16:09:40,391 | INFO     | exitmsg: OK
[2025-02-25 11:10:00] 2025-02-25 16:09:40,392 | INFO     | cpuconsumptiontime: 46553 s
[2025-02-25 11:10:00] 2025-02-25 16:09:40,392 | INFO     | nevents: 400
[2025-02-25 11:10:00] 2025-02-25 16:09:40,392 | INFO     | neventsw: 0
[2025-02-25 11:10:00] 2025-02-25 16:09:40,392 | INFO     | pid: 26918
[2025-02-25 11:10:00] 2025-02-25 16:09:40,392 | INFO     | pgrp: 26918
[2025-02-25 11:10:00] 2025-02-25 16:09:40,392 | INFO     | corecount: 12
[2025-02-25 11:10:00] 2025-02-25 16:09:40,392 | INFO     | event service: False
[2025-02-25 11:10:00] 2025-02-25 16:09:40,393 | INFO     | sizes: {0: 2376939, 5: 2377145, 11: 2377201, 4968: 2403281, 4970: 2412222, 4972: 2412278, 4979: 2412576}
[2025-02-25 11:10:00] 2025-02-25 16:09:40,393 | INFO     | --------------------------------------------------
[2025-02-25 11:10:00] 2025-02-25 16:09:40,393 | INFO     | 
[2025-02-25 11:10:00] 2025-02-25 16:09:40,393 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 11:10:00] 2025-02-25 16:09:40,415 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 11:10:00] 2025-02-25 16:09:40,415 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 11:10:00] 2025-02-25 16:09:40,415 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 11:10:00] 2025-02-25 16:09:40,415 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 11:10:00] 2025-02-25 16:09:40,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 11:10:00] 2025-02-25 16:09:40,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 11:10:00] 2025-02-25 16:09:40,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 11:10:00] 2025-02-25 16:09:40,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 11:10:00] 2025-02-25 16:09:40,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 11:10:00] 2025-02-25 16:09:40,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 11:10:00] 2025-02-25 16:09:40,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 11:10:00] 2025-02-25 16:09:40,417 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 11:10:00] 2025-02-25 16:09:40,417 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 11:10:00] 2025-02-25 16:09:40,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 11:10:00] 2025-02-25 16:09:40,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 11:10:00] 2025-02-25 16:09:40,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 11:10:00] 2025-02-25 16:09:40,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 11:10:00] 2025-02-25 16:09:40,418 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 11:10:00] 2025-02-25 16:09:40,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 11:10:00] 2025-02-25 16:09:40,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 11:10:00] 2025-02-25 16:09:40,418 | INFO     | job 6530433764 has completed (purged errors)
[2025-02-25 11:10:00] 2025-02-25 16:09:40,418 | INFO     | overall cleanup function is called
[2025-02-25 11:10:00] 2025-02-25 16:09:41,426 | INFO     | --- collectZombieJob: --- 10, [26918]
[2025-02-25 11:10:00] 2025-02-25 16:09:41,427 | INFO     | zombie collector waiting for pid 26918
[2025-02-25 11:10:00] 2025-02-25 16:09:41,427 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 11:10:00] 2025-02-25 16:09:41,427 | INFO     | collected zombie processes
[2025-02-25 11:10:00] 2025-02-25 16:09:41,427 | INFO     | will attempt to kill all subprocesses of pid=26918
[2025-02-25 11:10:00] 2025-02-25 16:09:41,490 | INFO     | process IDs to be killed: [26918] (in reverse order)
[2025-02-25 11:10:00] 2025-02-25 16:09:41,539 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 11:10:00] 2025-02-25 16:09:41,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 11:10:00] 2025-02-25 16:09:41,544 | INFO     | did not find any defunct processes belonging to 26918
[2025-02-25 11:10:00] 2025-02-25 16:09:41,547 | INFO     | did not find any defunct processes belonging to 26918
[2025-02-25 11:10:00] 2025-02-25 16:09:41,548 | INFO     | ready for new job
[2025-02-25 11:10:00] 2025-02-25 16:09:41,548 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 11:10:00] 2025-02-25 16:09:41,550 | INFO     | **************************************
[2025-02-25 11:10:00] 2025-02-25 16:09:41,550 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 11:10:00] 2025-02-25 16:09:41,550 | INFO     | **************************************
[2025-02-25 11:10:00] 2025-02-25 16:09:41,550 | INFO     | 
[2025-02-25 11:10:00] 2025-02-25 16:09:41,551 | INFO     | architecture information:
[2025-02-25 11:10:00] 2025-02-25 16:09:41,551 | INFO     | executing command: cat /etc/os-release
[2025-02-25 11:10:00] 2025-02-25 16:09:41,565 | INFO     | cat /etc/os-release:
[2025-02-25 11:10:00] NAME="CentOS Linux"
[2025-02-25 11:10:00] VERSION="7 (Core)"
[2025-02-25 11:10:00] ID="centos"
[2025-02-25 11:10:00] ID_LIKE="rhel fedora"
[2025-02-25 11:10:00] VERSION_ID="7"
[2025-02-25 11:10:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 11:10:00] ANSI_COLOR="0;31"
[2025-02-25 11:10:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 11:10:00] HOME_URL="https://www.centos.org/"
[2025-02-25 11:10:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 11:10:00] 
[2025-02-25 11:10:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 11:10:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 11:10:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 11:10:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 11:10:00] 
[2025-02-25 11:10:00] 2025-02-25 16:09:41,565 | INFO     | **************************************
[2025-02-25 11:10:00] 2025-02-25 16:09:42,068 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 11:10:00] 2025-02-25 16:09:42,085 | INFO     | sufficient remaining disk space (29369565184 B)
[2025-02-25 11:10:00] 2025-02-25 16:09:42,086 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 11:10:00] 2025-02-25 16:09:42,086 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 11:10:00] 2025-02-25 16:09:42,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 11:10:00] 2025-02-25 16:09:42,087 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 11:10:00] 2025-02-25 16:09:42,087 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 11:10:00] 2025-02-25 16:09:42,087 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 11:10:00] 2025-02-25 16:09:42,088 | INFO     | aborting loop
[2025-02-25 11:10:00] 2025-02-25 16:09:42,088 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 11:10:00] 2025-02-25 16:09:42,089 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 11:10:00] 2025-02-25 16:09:42,089 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 11:10:00] 2025-02-25 16:09:42,679 | INFO     | all data control threads have been joined
[2025-02-25 11:10:00] 2025-02-25 16:09:42,741 | INFO     | all job control threads have been joined
[2025-02-25 11:10:00] 2025-02-25 16:09:43,088 | INFO     | [job] queue monitor thread has finished
[2025-02-25 11:10:00] 2025-02-25 16:09:43,091 | INFO     | [job] retrieve thread has finished
[2025-02-25 11:10:00] 2025-02-25 16:09:43,094 | INFO     | [job] job monitor thread has finished
[2025-02-25 11:10:00] 2025-02-25 16:09:43,243 | INFO     | [payload] failed_post thread has finished
[2025-02-25 11:10:00] 2025-02-25 16:09:43,248 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 11:10:00] 2025-02-25 16:09:43,276 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 11:10:00] 2025-02-25 16:09:43,362 | INFO     | all payload control threads have been joined
[2025-02-25 11:10:00] 2025-02-25 16:09:43,571 | INFO     | [data] copytool_in thread has finished
[2025-02-25 11:10:00] 2025-02-25 16:09:43,685 | INFO     | [data] control thread has finished
[2025-02-25 11:10:00] 2025-02-25 16:09:43,747 | INFO     | [job] control thread has finished
[2025-02-25 11:10:00] 2025-02-25 16:09:43,914 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 11:10:00] 2025-02-25 16:09:44,089 | INFO     | [data] copytool_out thread has finished
[2025-02-25 11:10:00] 2025-02-25 16:09:44,094 | INFO     | [job] validate thread has finished
[2025-02-25 11:10:00] 2025-02-25 16:09:44,234 | INFO     | [payload] validate_post thread has finished
[2025-02-25 11:10:00] 2025-02-25 16:09:44,368 | INFO     | [payload] control thread has finished
[2025-02-25 11:10:00] 2025-02-25 16:09:44,401 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 11:10:00] 2025-02-25 16:09:47,920 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 11:10:00] 2025-02-25 16:09:53,106 | INFO     | job.realtimelogging is not enabled
[2025-02-25 11:10:00] 2025-02-25 16:09:54,111 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 11:10:00] 2025-02-25 16:09:54,918 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140216542426944)>', '<ExcThread(monitor, started 140215507216128)>']
[2025-02-25 11:10:00] 2025-02-25 16:09:55,154 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 11:10:00] 2025-02-25 16:09:55,154 | INFO     | [monitor] control thread has ended
[2025-02-25 11:10:00] 2025-02-25 16:09:59,944 | INFO     | all workflow threads have been joined
[2025-02-25 11:10:00] 2025-02-25 16:09:59,944 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 11:10:00] 2025-02-25 16:09:59,944 | INFO     | traces error code: 0
[2025-02-25 11:10:00] 2025-02-25 16:09:59,945 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 11:10:00] 2025-02-25 16:10:00,044 [wrapper] ==== pilot stdout END ====
[2025-02-25 11:10:00] 2025-02-25 16:10:00,047 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 11:10:00] 2025-02-25 16:10:00,051 [wrapper] pilotpid: 20455
[2025-02-25 11:10:00] 2025-02-25 16:10:00,055 [wrapper] Pilot exit status: 0
[2025-02-25 11:10:00] 2025-02-25 16:10:00,070 [wrapper] pandaids: 6530433764
[2025-02-25 11:10:00] 2025-02-25 16:10:00,118 [wrapper] cleanup supervisor_pilot 10206 20456
[2025-02-25 11:10:00] 2025-02-25 16:10:00,122 [wrapper] Test setup, not cleaning
[2025-02-25 11:10:00] 2025-02-25 16:10:00,130 [wrapper] apfmon messages muted
[2025-02-25 11:10:00] 2025-02-25 16:10:00,134 [wrapper] ==== wrapper stdout END ====
[2025-02-25 11:10:00] 2025-02-25 16:10:00,138 [wrapper] ==== wrapper stderr END ====
[2025-02-25 11:10:00]  *** Error codes and diagnostics ***
[2025-02-25 11:10:00]     "exeErrorCode": 0,
[2025-02-25 11:10:00]     "exeErrorDiag": "",
[2025-02-25 11:10:00]     "pilotErrorCode": 0,
[2025-02-25 11:10:00]     "pilotErrorDiag": "",
[2025-02-25 11:10:00]  *** Listing of results directory ***
[2025-02-25 11:10:00] total 428844
[2025-02-25 11:10:00] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 09:02 pilot3.tar.gz
[2025-02-25 11:10:00] -rwx------ 1 boincer umatlas     35865 Feb 25 09:29 runpilot2-wrapper.sh
[2025-02-25 11:10:00] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 09:29 queuedata.json
[2025-02-25 11:10:00] -rw-r--r-- 1 boincer umatlas       100 Feb 25 09:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 11:10:00] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 09:46 run_atlas
[2025-02-25 11:10:00] -rw-r--r-- 1 boincer umatlas       105 Feb 25 09:46 job.xml
[2025-02-25 11:10:00] -rw-r--r-- 2 boincer umatlas 247858532 Feb 25 09:46 EVNT.43401161._000013.pool.root.1
[2025-02-25 11:10:00] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 09:46 start_atlas.sh
[2025-02-25 11:10:00] drwxrwx--x 2 boincer umatlas      4096 Feb 25 09:46 shared
[2025-02-25 11:10:00] -rw-r--r-- 2 boincer umatlas    503549 Feb 25 09:46 input.tar.gz
[2025-02-25 11:10:00] -rw-r--r-- 1 boincer umatlas         0 Feb 25 09:46 boinc_lockfile
[2025-02-25 11:10:00] -rw-r--r-- 1 boincer umatlas      2539 Feb 25 09:46 pandaJob.out
[2025-02-25 11:10:00] -rw------- 1 boincer umatlas       424 Feb 25 09:46 setup.sh.local
[2025-02-25 11:10:00] -rw------- 1 boincer umatlas    988282 Feb 25 09:46 agis_schedconf.cvmfs.json
[2025-02-25 11:10:00] -rw------- 1 boincer umatlas   1577983 Feb 25 09:46 agis_ddmendpoints.agis.ALL.json
[2025-02-25 11:10:00] drwx------ 4 boincer umatlas      4096 Feb 25 09:46 pilot3
[2025-02-25 11:10:00] -rw------- 1 boincer umatlas 185797707 Feb 25 11:08 HITS.43401163._000316.pool.root.1
[2025-02-25 11:10:00] -rw-r--r-- 1 boincer umatlas       530 Feb 25 11:09 boinc_task_state.xml
[2025-02-25 11:10:00] -rw------- 1 boincer umatlas      1044 Feb 25 11:09 memory_monitor_summary.json
[2025-02-25 11:10:00] -rw------- 1 boincer umatlas        95 Feb 25 11:09 pilot_heartbeat.json
[2025-02-25 11:10:00] -rw------- 1 boincer umatlas    370007 Feb 25 11:09 log.43401163._000316.job.log.tgz.1
[2025-02-25 11:10:00] -rw------- 1 boincer umatlas      7759 Feb 25 11:09 heartbeat.json
[2025-02-25 11:10:00] -rw-r--r-- 1 boincer umatlas      5868 Feb 25 11:09 init_data.xml
[2025-02-25 11:10:00] -rw-r--r-- 1 boincer umatlas        27 Feb 25 11:09 wrapper_checkpoint.txt
[2025-02-25 11:10:00] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 11:09 boinc_mmap_file
[2025-02-25 11:10:00] -rw------- 1 boincer umatlas      4410 Feb 25 11:09 pilotlog.txt
[2025-02-25 11:10:00] -rw------- 1 boincer umatlas    467858 Feb 25 11:10 log.43401163._000316.job.log.1
[2025-02-25 11:10:00] -rw------- 1 boincer umatlas       357 Feb 25 11:10 output.list
[2025-02-25 11:10:00] -rw-r--r-- 1 boincer umatlas       620 Feb 25 11:10 runtime_log
[2025-02-25 11:10:00] -rw------- 1 boincer umatlas    860160 Feb 25 11:10 result.tar.gz
[2025-02-25 11:10:00] -rw-r--r-- 1 boincer umatlas     11010 Feb 25 11:10 runtime_log.err
[2025-02-25 11:10:00] -rw------- 1 boincer umatlas       657 Feb 25 11:10 r6BODmJ7A76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmflfKDmHhnTFm.diag
[2025-02-25 11:10:00] -rw-r--r-- 1 boincer umatlas     21631 Feb 25 11:10 stderr.txt
[2025-02-25 11:10:00] HITS file was successfully produced:
[2025-02-25 11:10:00] -rw------- 1 boincer umatlas 185797707 Feb 25 11:08 shared/HITS.pool.root.1
[2025-02-25 11:10:00]  *** Contents of shared directory: ***
[2025-02-25 11:10:00] total 424852
[2025-02-25 11:10:00] -rw-r--r-- 2 boincer umatlas 247858532 Feb 25 09:46 ATLAS.root_0
[2025-02-25 11:10:00] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 09:46 start_atlas.sh
[2025-02-25 11:10:00] -rw-r--r-- 2 boincer umatlas    503549 Feb 25 09:46 input.tar.gz
[2025-02-25 11:10:00] -rw------- 1 boincer umatlas 185797707 Feb 25 11:08 HITS.pool.root.1
[2025-02-25 11:10:00] -rw------- 1 boincer umatlas    860160 Feb 25 11:10 result.tar.gz
11:10:01 (16855): run_atlas exited; CPU time 46489.739543
11:10:01 (16855): called boinc_finish(0)

</stderr_txt>
]]>

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