Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-25 08:15:38 (62456): Detected: vboxwrapper 26206
2025-02-25 08:15:38 (62456): Detected: BOINC client v8.0.2
2025-02-25 08:15:39 (62456): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2025-02-25 08:15:39 (62456): Successfully copied 'init_data.xml' to the shared directory.
2025-02-25 08:15:40 (62456): Create VM. (boinc_cabd04ef202ddad1, slot#11)
2025-02-25 08:15:41 (62456): Setting Memory Size for VM. (8000MB)
2025-02-25 08:15:41 (62456): Setting CPU Count for VM. (5)
2025-02-25 08:15:41 (62456): Setting Chipset Options for VM.
2025-02-25 08:15:41 (62456): Setting Graphics Controller Options for VM.
2025-02-25 08:15:42 (62456): Setting Boot Options for VM.
2025-02-25 08:15:42 (62456): Setting Network Configuration for NAT.
2025-02-25 08:15:42 (62456): Enabling VM Network Access.
2025-02-25 08:15:42 (62456): Disabling USB Support for VM.
2025-02-25 08:15:43 (62456): Disabling COM Port Support for VM.
2025-02-25 08:15:43 (62456): Disabling LPT Port Support for VM.
2025-02-25 08:15:43 (62456): Disabling Audio Support for VM.
2025-02-25 08:15:43 (62456): Disabling Clipboard Support for VM.
2025-02-25 08:15:44 (62456): Disabling Drag and Drop Support for VM.
2025-02-25 08:15:44 (62456): Adding storage controller(s) to VM.
2025-02-25 08:15:44 (62456): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-25 08:15:47 (62456): Adding VirtualBox Guest Additions to VM.
2025-02-25 08:15:47 (62456): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-25 08:15:48 (62456): forwarding host port 55042 to guest port 80
2025-02-25 08:15:48 (62456): Enabling remote desktop for VM.
2025-02-25 08:15:48 (62456): Enabling shared directory for VM.
2025-02-25 08:15:49 (62456): Starting VM using VBoxManage interface. (boinc_cabd04ef202ddad1, slot#11)
2025-02-25 08:15:56 (62456): Successfully started VM. (PID = '44604')
2025-02-25 08:15:56 (62456): Reporting VM Process ID to BOINC.
2025-02-25 08:15:56 (62456): Guest Log: BIOS: VirtualBox 7.0.14
2025-02-25 08:15:56 (62456): Guest Log: CPUID EDX: 0x178bfbff
2025-02-25 08:15:56 (62456): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-25 08:15:56 (62456): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-25 08:15:56 (62456): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-25 08:15:56 (62456): Detected: Web Application Enabled (http://localhost:55042)
2025-02-25 08:15:56 (62456): Detected: Remote Desktop Enabled (localhost:55043)
2025-02-25 08:15:56 (62456): Preference change detected
2025-02-25 08:15:56 (62456): Setting CPU throttle for VM. (100%)
2025-02-25 08:15:57 (62456): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-25 08:15:58 (62456): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-25 08:15:58 (62456): Guest Log: BIOS: Booting from Hard Disk...
2025-02-25 08:16:00 (62456): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-25 08:16:00 (62456): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-25 08:16:00 (62456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-25 08:16:10 (62456): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-25 08:16:10 (62456): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-25 08:16:50 (62456): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-25 08:16:50 (62456): Guest Log: 00:00:00.000145 main     Log opened 2025-02-25T08:16:49.105535000Z
2025-02-25 08:16:50 (62456): Guest Log: 00:00:00.000244 main     OS Product: Linux
2025-02-25 08:16:50 (62456): Guest Log: 00:00:00.000270 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-25 08:16:50 (62456): Guest Log: 00:00:00.000290 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-25 08:16:50 (62456): Guest Log: 00:00:00.000309 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-25 08:16:50 (62456): Guest Log: 00:00:00.000309 main     Process ID: 1431
2025-02-25 08:16:50 (62456): Guest Log: 00:00:00.000310 main     Package type: LINUX_64BITS_GENERIC
2025-02-25 08:16:50 (62456): Guest Log: 00:00:00.001664 main     5.2.32 r132073 started. Verbose level = 0
2025-02-25 08:16:51 (62456): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-25 08:16:51 (62456): Guest Log: [INFO] Mounting shared directory
2025-02-25 08:16:51 (62456): Guest Log: [INFO] Checking for init_data.xml
2025-02-25 08:16:54 (62456): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-25 08:16:54 (62456): Guest Log: [INFO] Detected branch: prod
2025-02-25 08:16:54 (62456): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-25 08:16:54 (62456): Guest Log: Copying input files
2025-02-25 08:16:55 (62456): Guest Log: Copied input files into RunAtlas.
2025-02-25 08:16:55 (62456): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-25 08:16:55 (62456): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-25 08:16:55 (62456): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-25 08:16:55 (62456): Guest Log: Further information can be found at the LHC@home message board.
2025-02-25 08:17:00 (62456): Guest Log: 00:00:10.024488 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 449 596 000ns (GuestNow=1 740 500 220 557 700 000 ns GuestLast=1 740 471 409 108 104 000 ns fSetTimeLastLoop=true )
2025-02-25 08:17:05 (62456): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-25 08:17:08 (62456): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-25 08:17:08 (62456): Guest Log: 2.6.3.0 1709 0 30076 143044 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-25 08:17:09 (62456): Guest Log: copied the webapp to /var/www
2025-02-25 08:17:09 (62456): Guest Log: ATHENA_PROC_NUMBER=5
2025-02-25 08:17:09 (62456): Guest Log: ATHENA_CORE_NUMBER=5
2025-02-25 08:17:10 (62456): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-25 08:17:10 (62456): Guest Log:  *** Starting ATLAS job. (PandaID=6530322315 taskID=43401137) ***
2025-02-25 09:56:15 (62456): Status Report: Elapsed Time: '6000.817713'
2025-02-25 09:56:15 (62456): Status Report: CPU Time: '24693.953125'
2025-02-25 10:03:31 (62456): Guest Log:  *** Job finished ***
2025-02-25 10:03:31 (62456): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-25 10:03:31 (62456): Guest Log: 2025-02-25 18:03:21,259 | INFO     | [job] validate thread has finished
2025-02-25 10:03:31 (62456): Guest Log: 2025-02-25 18:03:21,976 | INFO     | [data] copytool_out thread has finished
2025-02-25 10:03:31 (62456): Guest Log: 2025-02-25 18:03:22,819 | INFO     | [data] queue_monitor thread has finished
2025-02-25 10:03:31 (62456): Guest Log: 2025-02-25 18:03:23,508 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139752899651392)>', '<ExcThread(monitor, started 139752330229504)>']
2025-02-25 10:03:31 (62456): Guest Log: 2025-02-25 18:03:23,822 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-25 10:03:31 (62456): Guest Log: 2025-02-25 18:03:23,822 | INFO     | [monitor] control thread has ended
2025-02-25 10:03:31 (62456): Guest Log: 2025-02-25 18:03:28,539 | INFO     | all workflow threads have been joined
2025-02-25 10:03:31 (62456): Guest Log: 2025-02-25 18:03:28,539 | INFO     | end of generic workflow (traces error code: 0)
2025-02-25 10:03:31 (62456): Guest Log: 2025-02-25 18:03:28,539 | INFO     | traces error code: 0
2025-02-25 10:03:31 (62456): Guest Log: 2025-02-25 18:03:28,540 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-25 10:03:31 (62456): Guest Log: 2025-02-25 18:03:28,608 [wrapper] ==== pilot stdout END ====
2025-02-25 10:03:31 (62456): Guest Log: 2025-02-25 18:03:28,612 [wrapper] ==== wrapper stdout RESUME ====
2025-02-25 10:03:31 (62456): Guest Log: 2025-02-25 18:03:28,617 [wrapper] pilotpid: 6038
2025-02-25 10:03:31 (62456): Guest Log: 2025-02-25 18:03:28,624 [wrapper] Pilot exit status: 0
2025-02-25 10:03:31 (62456): Guest Log: 2025-02-25 18:03:29,201 [wrapper] pandaids: 6530322315
2025-02-25 10:03:31 (62456): Guest Log: 2025-02-25 18:03:29,227 [wrapper] cleanup supervisor_pilot  5453 6039
2025-02-25 10:03:31 (62456): Guest Log: 2025-02-25 18:03:29,232 [wrapper] Test setup, not cleaning
2025-02-25 10:03:31 (62456): Guest Log: 2025-02-25 18:03:29,240 [wrapper] apfmon messages muted
2025-02-25 10:03:31 (62456): Guest Log: 2025-02-25 18:03:29,244 [wrapper] ==== wrapper stdout END ====
2025-02-25 10:03:31 (62456): Guest Log: 2025-02-25 18:03:29,248 [wrapper] ==== wrapper stderr END ====
2025-02-25 10:03:31 (62456): Guest Log:  *** Error codes and diagnostics ***
2025-02-25 10:03:31 (62456): Guest Log:     "exeErrorCode": 0,
2025-02-25 10:03:31 (62456): Guest Log:     "exeErrorDiag": "",
2025-02-25 10:03:31 (62456): Guest Log:     "pilotErrorCode": 0,
2025-02-25 10:03:31 (62456): Guest Log:     "pilotErrorDiag": "",
2025-02-25 10:03:31 (62456): Guest Log:  *** Listing of results directory ***
2025-02-25 10:03:31 (62456): Guest Log: total 190840
2025-02-25 10:03:31 (62456): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 25 13:14 pilot3.tar.gz
2025-02-25 10:03:31 (62456): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 25 13:19 queuedata.json
2025-02-25 10:03:31 (62456): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 25 13:19 runpilot2-wrapper.sh
2025-02-25 10:03:31 (62456): Guest Log: -rwxr-xr-x. 1 atlas atlas      9396 Feb 25 16:16 init_data.xml
2025-02-25 10:03:31 (62456): Guest Log: -rwxr-xr-x. 1 atlas atlas    503551 Feb 25 16:16 input.tar.gz
2025-02-25 10:03:31 (62456): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 25 16:16 start_atlas.sh
2025-02-25 10:03:31 (62456): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 25 16:16 EVNT.43401135._000036.pool.root.1 -> /data/./ATLAS.root_0
2025-02-25 10:03:31 (62456): Guest Log: -rw-r--r--. 1 atlas atlas      2556 Feb 25 16:17 pandaJob.out
2025-02-25 10:03:31 (62456): Guest Log: -rw-------. 1 atlas atlas       424 Feb 25 16:17 setup.sh.local
2025-02-25 10:03:31 (62456): Guest Log: -rw-------. 1 atlas atlas    988282 Feb 25 16:18 agis_schedconf.cvmfs.json
2025-02-25 10:03:31 (62456): Guest Log: -rw-------. 1 atlas atlas   1577983 Feb 25 16:18 agis_ddmendpoints.agis.ALL.json
2025-02-25 10:03:31 (62456): Guest Log: drwx------. 4 atlas atlas      4096 Feb 25 16:18 pilot3
2025-02-25 10:03:31 (62456): Guest Log: -rw-------. 1 atlas atlas 190067080 Feb 25 18:02 HITS.43401137._000796.pool.root.1
2025-02-25 10:03:31 (62456): Guest Log: -rw-------. 1 atlas atlas        95 Feb 25 18:03 pilot_heartbeat.json
2025-02-25 10:03:31 (62456): Guest Log: -rw-------. 1 atlas atlas      1037 Feb 25 18:03 memory_monitor_summary.json
2025-02-25 10:03:31 (62456): Guest Log: -rw-------. 1 atlas atlas    276269 Feb 25 18:03 log.43401137._000796.job.log.tgz.1
2025-02-25 10:03:31 (62456): Guest Log: -rw-------. 1 atlas atlas      7752 Feb 25 18:03 heartbeat.json
2025-02-25 10:03:31 (62456): Guest Log: -rw-------. 1 atlas atlas      4714 Feb 25 18:03 pilotlog.txt
2025-02-25 10:03:31 (62456): Guest Log: -rw-------. 1 atlas atlas    532168 Feb 25 18:03 log.43401137._000796.job.log.1
2025-02-25 10:03:31 (62456): Guest Log: -rw-------. 1 atlas atlas       357 Feb 25 18:03 output.list
2025-02-25 10:03:31 (62456): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 25 18:03 runtime_log
2025-02-25 10:03:31 (62456): Guest Log: -rw-------. 1 atlas atlas    829440 Feb 25 18:03 result.tar.gz
2025-02-25 10:03:31 (62456): Guest Log: -rw-------. 1 atlas atlas       654 Feb 25 18:03 xypMDmR1966n9Rq4apOajLDm4fhM0noT9bVoFjIUDmsdfKDmFlRkfm.diag
2025-02-25 10:03:31 (62456): Guest Log: -rw-r--r--. 1 atlas atlas     10944 Feb 25 18:03 runtime_log.err
2025-02-25 10:03:31 (62456): Guest Log: Looking for outputfile HITS.43401137._000796.pool.root.1
2025-02-25 10:03:31 (62456): Guest Log: HITS file was successfully produced
2025-02-25 10:03:31 (62456): Guest Log: -rw-------. 1 atlas atlas 190067080 Feb 25 18:02 /home/atlas/RunAtlas/HITS.43401137._000796.pool.root.1
2025-02-25 10:03:31 (62456): Guest Log: Successfully finished the ATLAS job!
2025-02-25 10:03:31 (62456): Guest Log: Copying the results back to the shared directory!
2025-02-25 10:03:31 (62456): Guest Log:  *** Contents of shared directory: ***
2025-02-25 10:03:31 (62456): Guest Log: total 432416
2025-02-25 10:03:31 (62456): Guest Log: -rwxrwxrwx. 1 root root 251353016 Feb 25 16:15 ATLAS.root_0
2025-02-25 10:03:31 (62456): Guest Log: -rwxrwxrwx. 1 root root 190067080 Feb 25 18:03 HITS.pool.root.1
2025-02-25 10:03:31 (62456): Guest Log: -rwxrwxrwx. 1 root root      9396 Feb 25 16:15 init_data.xml
2025-02-25 10:03:31 (62456): Guest Log: -rwxrwxrwx. 1 root root    503551 Feb 25 13:25 input.tar.gz
2025-02-25 10:03:31 (62456): Guest Log: -rwxrwxrwx. 1 root root    829440 Feb 25 18:03 result.tar.gz
2025-02-25 10:03:31 (62456): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 25 13:25 start_atlas.sh
2025-02-25 10:03:31 (62456): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-25 10:03:31 (62456): VM Completion File Detected.
2025-02-25 10:03:31 (62456): Powering off VM.
2025-02-25 10:03:33 (62456): Successfully stopped VM.
2025-02-25 10:03:33 (62456): Deregistering VM. (boinc_cabd04ef202ddad1, slot#11)
2025-02-25 10:03:33 (62456): Removing network bandwidth throttle group from VM.
2025-02-25 10:03:33 (62456): Removing VM from VirtualBox.
10:03:38 (62456): called boinc_finish(0)

</stderr_txt>
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