Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:29:32 (11021): wrapper (7.7.26015): starting
07:29:32 (11021): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 07:29:32] Arguments: --nthreads 12
[2025-02-25 07:29:32] Threads: 12
[2025-02-25 07:29:32] Checking for CVMFS
[2025-02-25 07:29:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 07:29:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 07:29:32] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 07:29:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 07:29:33] 2.11.2.0 3563 295862 193840 143039 0 56 12535759 20275201 1 130560 0 23622749 99.991 6619988 45122 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 07:29:33] CVMFS is ok
[2025-02-25 07:29:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 07:29:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 07:29:33] Further information can be found at the LHC@home message board.
[2025-02-25 07:29:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 07:29:33] Checking for apptainer binary...
[2025-02-25 07:29:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 07:29:33] Running /usr/bin/apptainer --version
[2025-02-25 07:29:33] apptainer version 1.3.2-1.el7
[2025-02-25 07:29:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 07:29:34] c-205-13.aglt2.org
[2025-02-25 07:29:34] apptainer works
[2025-02-25 07:29:34] Set ATHENA_PROC_NUMBER=12
[2025-02-25 07:29:34] Set ATHENA_CORE_NUMBER=12
[2025-02-25 07:29:34] Starting ATLAS job with PandaID=6530221963
[2025-02-25 07:29:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 08:53:09]  *** The last 200 lines of the pilot log: ***
[2025-02-25 08:53:09]  is_tar=False
[2025-02-25 08:53:09]  lfn=log.43401137._000340.job.log.tgz.1
[2025-02-25 08:53:09]  mtime=0
[2025-02-25 08:53:09]  protocol_id=None
[2025-02-25 08:53:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 08:53:09]  replicas=None
[2025-02-25 08:53:09]  scope=mc23_13p6TeV
[2025-02-25 08:53:09]  status=None
[2025-02-25 08:53:09]  status_code=0
[2025-02-25 08:53:09]  storage_token=
[2025-02-25 08:53:09]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530221963/log.43401137._000340.job.log.tgz.1
[2025-02-25 08:53:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/36/log.43401137._000340.job.log.tgz.1
[2025-02-25 08:53:09]  workdir=None
[2025-02-25 08:53:09] ]
[2025-02-25 08:53:09] 2025-02-25 13:52:39,368 | INFO     | transferring file log.43401137._000340.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530221963/log.43401137._000340.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 08:53:09] 2025-02-25 13:52:39,368 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530221963/log.43401137._000340.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401137._000340.job
[2025-02-25 08:53:09] 2025-02-25 13:52:39,389 | INFO     | adding to output.list: log.43401137._000340.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/36/log.43401137._000340.job.log.tg
[2025-02-25 08:53:09] 2025-02-25 13:52:39,390 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 08:53:09] 2025-02-25 13:52:39,390 | INFO     | summary of transferred files:
[2025-02-25 08:53:09] 2025-02-25 13:52:39,390 | INFO     |  -- lfn=log.43401137._000340.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 08:53:09] 2025-02-25 13:52:39,391 | INFO     | stage-out finished correctly
[2025-02-25 08:53:09] 2025-02-25 13:52:42,824 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 08:53:09] 2025-02-25 13:52:43,467 | WARNING  | process 21198 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 08:53:09] 2025-02-25 13:52:43,468 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530221963/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 08:53:09] 2025-02-25 13:52:43,533 | INFO     | number of running child processes to parent process 21198: 1
[2025-02-25 08:53:09] 2025-02-25 13:52:43,534 | INFO     | maximum number of monitored processes: 6
[2025-02-25 08:53:09] 2025-02-25 13:52:45,909 | INFO     | job 6530221963 has state=finished
[2025-02-25 08:53:09] 2025-02-25 13:52:45,910 | INFO     | preparing for final server update for job 6530221963 in state='finished'
[2025-02-25 08:53:09] 2025-02-25 13:52:45,910 | INFO     | this job has now completed (state=finished)
[2025-02-25 08:53:09] 2025-02-25 13:52:45,910 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 08:53:09] 2025-02-25 13:52:45,911 | INFO     | log transfer has been attempted: DONE
[2025-02-25 08:53:09] 2025-02-25 13:52:45,911 | INFO     | job 6530221963 has finished - writing final server update
[2025-02-25 08:53:09] 2025-02-25 13:52:45,911 | INFO     | total number of processed events: 400 (read)
[2025-02-25 08:53:09] 2025-02-25 13:52:45,913 | INFO     | executing command: lscpu
[2025-02-25 08:53:09] 2025-02-25 13:52:45,937 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 08:53:09] 2025-02-25 13:52:45,950 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 08:53:09] 2025-02-25 13:52:46,036 | INFO     | monitor loop #364: job 0:6530221963 is in state 'finished'
[2025-02-25 08:53:09] 2025-02-25 13:52:46,037 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 08:53:09] 2025-02-25 13:52:48,539 | INFO     | monitor loop #365: job 0:6530221963 is in state 'finished'
[2025-02-25 08:53:09] 2025-02-25 13:52:48,539 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 08:53:09] 2025-02-25 13:52:50,822 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 08:53:09] 2025-02-25 13:52:50,822 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530221963/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 08:53:09] 2025-02-25 13:52:50,823 | INFO     | extracted standard info from prmon json
[2025-02-25 08:53:09] 2025-02-25 13:52:50,823 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 08:53:09] 2025-02-25 13:52:50,824 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 08:53:09] 2025-02-25 13:52:50,824 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 08:53:09] 2025-02-25 13:52:50,824 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 08:53:09] 2025-02-25 13:52:50,827 | INFO     | fitting pss+swap vs Time
[2025-02-25 08:53:09] 2025-02-25 13:52:50,827 | INFO     | model: linear, x: [1740486921.0, 1740486982.0, 1740487043.0, 1740487104.0, 1740487165.0, 1740487226.0, 1740487287.0, 1740487348.0, 1740487409.0, 1740487470.0, 1740
[2025-02-25 08:53:09] 2025-02-25 13:52:50,827 | INFO     | sum of square deviations: 125630262.5
[2025-02-25 08:53:09] 2025-02-25 13:52:50,827 | INFO     | sum of deviations: 18626173923.5
[2025-02-25 08:53:09] 2025-02-25 13:52:50,828 | INFO     | mean x: 1740489147.5
[2025-02-25 08:53:09] 2025-02-25 13:52:50,828 | INFO     | mean y: 2658521.9054054054
[2025-02-25 08:53:09] 2025-02-25 13:52:50,828 | INFO     | -- intersect: -258045465617.76395
[2025-02-25 08:53:09] 2025-02-25 13:52:50,828 | INFO     | intersect: -258045465617.76395
[2025-02-25 08:53:09] 2025-02-25 13:52:50,828 | INFO     | chi2: 2.386278522280168
[2025-02-25 08:53:09] 2025-02-25 13:52:50,828 | INFO     | -- intersect: -258045465617.76395
[2025-02-25 08:53:09] 2025-02-25 13:52:50,828 | INFO     | current memory leak: 148.26 B/s (using 74 data points, chi2=2.39)
[2025-02-25 08:53:09] 2025-02-25 13:52:50,829 | INFO     | ..............................
[2025-02-25 08:53:09] 2025-02-25 13:52:50,829 | INFO     | . Timing measurements:
[2025-02-25 08:53:09] 2025-02-25 13:52:50,829 | INFO     | . get job = 0 s
[2025-02-25 08:53:09] 2025-02-25 13:52:50,829 | INFO     | . initial setup = 2 s
[2025-02-25 08:53:09] 2025-02-25 13:52:50,829 | INFO     | . payload setup = 7 s
[2025-02-25 08:53:09] 2025-02-25 13:52:50,829 | INFO     | . stage-in = 0 s
[2025-02-25 08:53:09] 2025-02-25 13:52:50,830 | INFO     | . payload execution = 4944 s
[2025-02-25 08:53:09] 2025-02-25 13:52:50,830 | INFO     | . stage-out = 0 s
[2025-02-25 08:53:09] 2025-02-25 13:52:50,830 | INFO     | . log creation = 0 s
[2025-02-25 08:53:09] 2025-02-25 13:52:50,830 | INFO     | ..............................
[2025-02-25 08:53:09] 2025-02-25 13:52:50,943 | INFO     | 
[2025-02-25 08:53:09] 2025-02-25 13:52:50,943 | INFO     | job summary report
[2025-02-25 08:53:09] 2025-02-25 13:52:50,943 | INFO     | --------------------------------------------------
[2025-02-25 08:53:09] 2025-02-25 13:52:50,943 | INFO     | PanDA job id: 6530221963
[2025-02-25 08:53:09] 2025-02-25 13:52:50,944 | INFO     | task id: 43401137
[2025-02-25 08:53:09] 2025-02-25 13:52:50,944 | INFO     | errors: (none)
[2025-02-25 08:53:09] 2025-02-25 13:52:50,944 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 08:53:09] 2025-02-25 13:52:50,944 | INFO     | pilot state: finished 
[2025-02-25 08:53:09] 2025-02-25 13:52:50,944 | INFO     | transexitcode: 0
[2025-02-25 08:53:09] 2025-02-25 13:52:50,944 | INFO     | exeerrorcode: 0
[2025-02-25 08:53:09] 2025-02-25 13:52:50,945 | INFO     | exeerrordiag: 
[2025-02-25 08:53:09] 2025-02-25 13:52:50,945 | INFO     | exitcode: 0
[2025-02-25 08:53:09] 2025-02-25 13:52:50,945 | INFO     | exitmsg: OK
[2025-02-25 08:53:09] 2025-02-25 13:52:50,945 | INFO     | cpuconsumptiontime: 46728 s
[2025-02-25 08:53:09] 2025-02-25 13:52:50,945 | INFO     | nevents: 400
[2025-02-25 08:53:09] 2025-02-25 13:52:50,945 | INFO     | neventsw: 0
[2025-02-25 08:53:09] 2025-02-25 13:52:50,945 | INFO     | pid: 21198
[2025-02-25 08:53:09] 2025-02-25 13:52:50,946 | INFO     | pgrp: 21198
[2025-02-25 08:53:09] 2025-02-25 13:52:50,946 | INFO     | corecount: 12
[2025-02-25 08:53:09] 2025-02-25 13:52:50,946 | INFO     | event service: False
[2025-02-25 08:53:09] 2025-02-25 13:52:50,946 | INFO     | sizes: {0: 2383198, 1: 2383397, 6: 2383603, 11: 2383631, 4955: 2409712, 4956: 2418653, 4959: 2418837, 4967: 2419007}
[2025-02-25 08:53:09] 2025-02-25 13:52:50,946 | INFO     | --------------------------------------------------
[2025-02-25 08:53:09] 2025-02-25 13:52:50,946 | INFO     | 
[2025-02-25 08:53:09] 2025-02-25 13:52:50,946 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 08:53:09] 2025-02-25 13:52:50,970 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 08:53:09] 2025-02-25 13:52:50,970 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 08:53:09] 2025-02-25 13:52:50,970 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 08:53:09] 2025-02-25 13:52:50,971 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 08:53:09] 2025-02-25 13:52:50,971 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 08:53:09] 2025-02-25 13:52:50,971 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 08:53:09] 2025-02-25 13:52:50,971 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 08:53:09] 2025-02-25 13:52:50,971 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 08:53:09] 2025-02-25 13:52:50,971 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 08:53:09] 2025-02-25 13:52:50,972 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 08:53:09] 2025-02-25 13:52:50,972 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 08:53:09] 2025-02-25 13:52:50,972 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 08:53:09] 2025-02-25 13:52:50,972 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 08:53:09] 2025-02-25 13:52:50,972 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 08:53:09] 2025-02-25 13:52:50,972 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 08:53:09] 2025-02-25 13:52:50,973 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 08:53:09] 2025-02-25 13:52:50,973 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 08:53:09] 2025-02-25 13:52:50,973 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 08:53:09] 2025-02-25 13:52:50,973 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 08:53:09] 2025-02-25 13:52:50,973 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 08:53:09] 2025-02-25 13:52:50,974 | INFO     | job 6530221963 has completed (purged errors)
[2025-02-25 08:53:09] 2025-02-25 13:52:50,974 | INFO     | overall cleanup function is called
[2025-02-25 08:53:09] 2025-02-25 13:52:51,801 | INFO     | 4986s have passed since pilot start
[2025-02-25 08:53:09] 2025-02-25 13:52:51,982 | INFO     | --- collectZombieJob: --- 10, [21198]
[2025-02-25 08:53:09] 2025-02-25 13:52:51,982 | INFO     | zombie collector waiting for pid 21198
[2025-02-25 08:53:09] 2025-02-25 13:52:51,982 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 08:53:09] 2025-02-25 13:52:51,982 | INFO     | collected zombie processes
[2025-02-25 08:53:09] 2025-02-25 13:52:51,982 | INFO     | will attempt to kill all subprocesses of pid=21198
[2025-02-25 08:53:09] 2025-02-25 13:52:52,046 | INFO     | process IDs to be killed: [21198] (in reverse order)
[2025-02-25 08:53:09] 2025-02-25 13:52:52,095 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 08:53:09] 2025-02-25 13:52:52,096 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 08:53:09] 2025-02-25 13:52:52,098 | INFO     | did not find any defunct processes belonging to 21198
[2025-02-25 08:53:09] 2025-02-25 13:52:52,101 | INFO     | did not find any defunct processes belonging to 21198
[2025-02-25 08:53:09] 2025-02-25 13:52:52,101 | INFO     | ready for new job
[2025-02-25 08:53:09] 2025-02-25 13:52:52,101 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 08:53:09] 2025-02-25 13:52:52,102 | INFO     | **************************************
[2025-02-25 08:53:09] 2025-02-25 13:52:52,102 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 08:53:09] 2025-02-25 13:52:52,103 | INFO     | **************************************
[2025-02-25 08:53:09] 2025-02-25 13:52:52,103 | INFO     | 
[2025-02-25 08:53:09] 2025-02-25 13:52:52,103 | INFO     | architecture information:
[2025-02-25 08:53:09] 2025-02-25 13:52:52,104 | INFO     | executing command: cat /etc/os-release
[2025-02-25 08:53:09] 2025-02-25 13:52:52,118 | INFO     | cat /etc/os-release:
[2025-02-25 08:53:09] NAME="CentOS Linux"
[2025-02-25 08:53:09] VERSION="7 (Core)"
[2025-02-25 08:53:09] ID="centos"
[2025-02-25 08:53:09] ID_LIKE="rhel fedora"
[2025-02-25 08:53:09] VERSION_ID="7"
[2025-02-25 08:53:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 08:53:09] ANSI_COLOR="0;31"
[2025-02-25 08:53:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 08:53:09] HOME_URL="https://www.centos.org/"
[2025-02-25 08:53:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 08:53:09] 
[2025-02-25 08:53:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 08:53:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 08:53:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 08:53:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 08:53:09] 
[2025-02-25 08:53:09] 2025-02-25 13:52:52,119 | INFO     | **************************************
[2025-02-25 08:53:09] 2025-02-25 13:52:52,622 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 08:53:09] 2025-02-25 13:52:52,638 | INFO     | sufficient remaining disk space (29354885120 B)
[2025-02-25 08:53:09] 2025-02-25 13:52:52,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 08:53:09] 2025-02-25 13:52:52,639 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 08:53:09] 2025-02-25 13:52:52,639 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 08:53:09] 2025-02-25 13:52:52,639 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 08:53:09] 2025-02-25 13:52:52,640 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 08:53:09] 2025-02-25 13:52:52,640 | INFO     | aborting loop
[2025-02-25 08:53:09] 2025-02-25 13:52:52,807 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 08:53:09] 2025-02-25 13:52:52,807 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 08:53:09] 2025-02-25 13:52:52,807 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 08:53:09] 2025-02-25 13:52:53,173 | INFO     | all data control threads have been joined
[2025-02-25 08:53:09] 2025-02-25 13:52:53,416 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 08:53:09] 2025-02-25 13:52:53,643 | INFO     | [job] queue monitor thread has finished
[2025-02-25 08:53:09] 2025-02-25 13:52:53,644 | INFO     | [job] job monitor thread has finished
[2025-02-25 08:53:09] 2025-02-25 13:52:53,644 | INFO     | [job] retrieve thread has finished
[2025-02-25 08:53:09] 2025-02-25 13:52:53,834 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 08:53:09] 2025-02-25 13:52:54,035 | INFO     | [payload] validate_post thread has finished
[2025-02-25 08:53:09] 2025-02-25 13:52:54,063 | INFO     | all payload control threads have been joined
[2025-02-25 08:53:09] 2025-02-25 13:52:54,095 | INFO     | all job control threads have been joined
[2025-02-25 08:53:09] 2025-02-25 13:52:54,126 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 08:53:09] 2025-02-25 13:52:54,179 | INFO     | [data] control thread has finished
[2025-02-25 08:53:09] 2025-02-25 13:52:54,450 | INFO     | [data] copytool_in thread has finished
[2025-02-25 08:53:09] 2025-02-25 13:52:54,554 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 08:53:09] 2025-02-25 13:52:54,578 | INFO     | [payload] failed_post thread has finished
[2025-02-25 08:53:09] 2025-02-25 13:52:54,645 | INFO     | [data] copytool_out thread has finished
[2025-02-25 08:53:09] 2025-02-25 13:52:55,060 | INFO     | [job] validate thread has finished
[2025-02-25 08:53:09] 2025-02-25 13:52:55,068 | INFO     | [payload] control thread has finished
[2025-02-25 08:53:09] 2025-02-25 13:52:55,101 | INFO     | [job] control thread has finished
[2025-02-25 08:53:09] 2025-02-25 13:52:57,422 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 08:53:09] 2025-02-25 13:53:02,670 | INFO     | job.realtimelogging is not enabled
[2025-02-25 08:53:09] 2025-02-25 13:53:03,676 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 08:53:09] 2025-02-25 13:53:04,497 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139730629482304)>', '<ExcThread(monitor, started 139729303496448)>']
[2025-02-25 08:53:09] 2025-02-25 13:53:04,859 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 08:53:09] 2025-02-25 13:53:04,860 | INFO     | [monitor] control thread has ended
[2025-02-25 08:53:09] 2025-02-25 13:53:09,500 | INFO     | all workflow threads have been joined
[2025-02-25 08:53:09] 2025-02-25 13:53:09,500 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 08:53:09] 2025-02-25 13:53:09,501 | INFO     | traces error code: 0
[2025-02-25 08:53:09] 2025-02-25 13:53:09,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 08:53:09] 2025-02-25 13:53:09,591 [wrapper] ==== pilot stdout END ====
[2025-02-25 08:53:09] 2025-02-25 13:53:09,594 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 08:53:09] 2025-02-25 13:53:09,598 [wrapper] pilotpid: 14616
[2025-02-25 08:53:09] 2025-02-25 13:53:09,602 [wrapper] Pilot exit status: 0
[2025-02-25 08:53:09] 2025-02-25 13:53:09,617 [wrapper] pandaids: 6530221963
[2025-02-25 08:53:09] 2025-02-25 13:53:09,653 [wrapper] cleanup supervisor_pilot  1322 14617
[2025-02-25 08:53:09] 2025-02-25 13:53:09,657 [wrapper] Test setup, not cleaning
[2025-02-25 08:53:09] 2025-02-25 13:53:09,664 [wrapper] apfmon messages muted
[2025-02-25 08:53:09] 2025-02-25 13:53:09,668 [wrapper] ==== wrapper stdout END ====
[2025-02-25 08:53:09] 2025-02-25 13:53:09,672 [wrapper] ==== wrapper stderr END ====
[2025-02-25 08:53:09]  *** Error codes and diagnostics ***
[2025-02-25 08:53:09]     "exeErrorCode": 0,
[2025-02-25 08:53:09]     "exeErrorDiag": "",
[2025-02-25 08:53:09]     "pilotErrorCode": 0,
[2025-02-25 08:53:09]     "pilotErrorDiag": "",
[2025-02-25 08:53:09]  *** Listing of results directory ***
[2025-02-25 08:53:09] total 436952
[2025-02-25 08:53:09] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 07:15 pilot3.tar.gz
[2025-02-25 08:53:09] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 07:18 queuedata.json
[2025-02-25 08:53:09] -rwx------ 1 boincer umatlas     35865 Feb 25 07:18 runpilot2-wrapper.sh
[2025-02-25 08:53:09] -rw-r--r-- 1 boincer umatlas       100 Feb 25 07:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 08:53:09] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 07:29 run_atlas
[2025-02-25 08:53:09] -rw-r--r-- 1 boincer umatlas       105 Feb 25 07:29 job.xml
[2025-02-25 08:53:09] -rw-r--r-- 2 boincer umatlas 255126242 Feb 25 07:29 EVNT.43401135._000018.pool.root.1
[2025-02-25 08:53:09] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 07:29 start_atlas.sh
[2025-02-25 08:53:09] drwxrwx--x 2 boincer umatlas      4096 Feb 25 07:29 shared
[2025-02-25 08:53:09] -rw-r--r-- 2 boincer umatlas    503553 Feb 25 07:29 input.tar.gz
[2025-02-25 08:53:09] -rw-r--r-- 1 boincer umatlas         0 Feb 25 07:29 boinc_lockfile
[2025-02-25 08:53:09] -rw-r--r-- 1 boincer umatlas      2556 Feb 25 07:29 pandaJob.out
[2025-02-25 08:53:09] -rw------- 1 boincer umatlas       424 Feb 25 07:29 setup.sh.local
[2025-02-25 08:53:09] -rw------- 1 boincer umatlas    989534 Feb 25 07:29 agis_schedconf.cvmfs.json
[2025-02-25 08:53:09] -rw------- 1 boincer umatlas   1582519 Feb 25 07:29 agis_ddmendpoints.agis.ALL.json
[2025-02-25 08:53:09] drwx------ 4 boincer umatlas      4096 Feb 25 07:29 pilot3
[2025-02-25 08:53:09] -rw-r--r-- 1 boincer umatlas      5869 Feb 25 08:45 init_data.xml
[2025-02-25 08:53:09] -rw------- 1 boincer umatlas 186844602 Feb 25 08:52 HITS.43401137._000340.pool.root.1
[2025-02-25 08:53:09] -rw-r--r-- 1 boincer umatlas       529 Feb 25 08:52 boinc_task_state.xml
[2025-02-25 08:53:09] -rw------- 1 boincer umatlas      1044 Feb 25 08:52 memory_monitor_summary.json
[2025-02-25 08:53:09] -rw------- 1 boincer umatlas    367527 Feb 25 08:52 log.43401137._000340.job.log.tgz.1
[2025-02-25 08:53:09] -rw------- 1 boincer umatlas        95 Feb 25 08:52 pilot_heartbeat.json
[2025-02-25 08:53:09] -rw------- 1 boincer umatlas      7759 Feb 25 08:52 heartbeat.json
[2025-02-25 08:53:09] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 08:52 boinc_mmap_file
[2025-02-25 08:53:09] -rw-r--r-- 1 boincer umatlas        27 Feb 25 08:52 wrapper_checkpoint.txt
[2025-02-25 08:53:09] -rw------- 1 boincer umatlas      4287 Feb 25 08:53 pilotlog.txt
[2025-02-25 08:53:09] -rw------- 1 boincer umatlas    465353 Feb 25 08:53 log.43401137._000340.job.log.1
[2025-02-25 08:53:09] -rw------- 1 boincer umatlas       357 Feb 25 08:53 output.list
[2025-02-25 08:53:09] -rw-r--r-- 1 boincer umatlas       620 Feb 25 08:53 runtime_log
[2025-02-25 08:53:09] -rw------- 1 boincer umatlas    849920 Feb 25 08:53 result.tar.gz
[2025-02-25 08:53:09] -rw------- 1 boincer umatlas       658 Feb 25 08:53 uo1NDmV4866n9Rq4apOajLDm4fhM0noT9bVoFjIUDmjXfKDmydXdUn.diag
[2025-02-25 08:53:09] -rw-r--r-- 1 boincer umatlas     11015 Feb 25 08:53 runtime_log.err
[2025-02-25 08:53:09] -rw-r--r-- 1 boincer umatlas     21586 Feb 25 08:53 stderr.txt
[2025-02-25 08:53:09] HITS file was successfully produced:
[2025-02-25 08:53:09] -rw------- 1 boincer umatlas 186844602 Feb 25 08:52 shared/HITS.pool.root.1
[2025-02-25 08:53:09]  *** Contents of shared directory: ***
[2025-02-25 08:53:09] total 432964
[2025-02-25 08:53:09] -rw-r--r-- 2 boincer umatlas 255126242 Feb 25 07:29 ATLAS.root_0
[2025-02-25 08:53:09] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 07:29 start_atlas.sh
[2025-02-25 08:53:09] -rw-r--r-- 2 boincer umatlas    503553 Feb 25 07:29 input.tar.gz
[2025-02-25 08:53:09] -rw------- 1 boincer umatlas 186844602 Feb 25 08:52 HITS.pool.root.1
[2025-02-25 08:53:09] -rw------- 1 boincer umatlas    849920 Feb 25 08:53 result.tar.gz
08:53:11 (11021): run_atlas exited; CPU time 46664.814927
08:53:11 (11021): called boinc_finish(0)

</stderr_txt>
]]>

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