Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:04:50 (1915990): wrapper (7.7.26015): starting
11:04:50 (1915990): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 11:04:50] Arguments: --nthreads 12
[2025-02-25 11:04:50] Threads: 12
[2025-02-25 11:04:50] Checking for CVMFS
[2025-02-25 11:04:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 11:04:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 11:04:50] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 11:04:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 11:04:51] 2.11.5.0 1229880 32256 224772 143048 0 701 42798258 45568001 11054 130560 0 172154587 99.673 178841976 25742 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-02-25 11:04:51] CVMFS is ok
[2025-02-25 11:04:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 11:04:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 11:04:51] Further information can be found at the LHC@home message board.
[2025-02-25 11:04:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 11:04:51] Checking for apptainer binary...
[2025-02-25 11:04:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 11:04:51] Running /usr/bin/apptainer --version
[2025-02-25 11:04:51] apptainer version 1.3.5-1.el9
[2025-02-25 11:04:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 11:04:52] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0087.triumf.lcg
[2025-02-25 11:04:52] apptainer works
[2025-02-25 11:04:52] Set ATHENA_PROC_NUMBER=12
[2025-02-25 11:04:52] Set ATHENA_CORE_NUMBER=12
[2025-02-25 11:04:52] Starting ATLAS job with PandaID=6530221905
[2025-02-25 11:04:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 12:35:53]  *** The last 200 lines of the pilot log: ***
[2025-02-25 12:35:53]  mtime=0
[2025-02-25 12:35:53]  protocol_id=None
[2025-02-25 12:35:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 12:35:53]  replicas=None
[2025-02-25 12:35:53]  scope=mc23_13p6TeV
[2025-02-25 12:35:53]  status=None
[2025-02-25 12:35:53]  status_code=0
[2025-02-25 12:35:53]  storage_token=
[2025-02-25 12:35:53]  surl=/home/boinc/slots/0/PanDA_Pilot-6530221905/log.43401137._000282.job.log.tgz.1
[2025-02-25 12:35:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/ab/log.43401137._000282.job.log.tgz.1
[2025-02-25 12:35:53]  workdir=None
[2025-02-25 12:35:53] ]
[2025-02-25 12:35:53] 2025-02-25 20:35:23,602 | INFO     | transferring file log.43401137._000282.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6530221905/log.43401137._000282.job.log.tgz.1 to /home/boinc/slots/0/log.
[2025-02-25 12:35:53] 2025-02-25 20:35:23,602 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6530221905/log.43401137._000282.job.log.tgz.1 /home/boinc/slots/0/log.43401137._000282.job.log.t
[2025-02-25 12:35:53] 2025-02-25 20:35:23,615 | INFO     | adding to output.list: log.43401137._000282.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/ab/log.43401137._000282.job.log.tg
[2025-02-25 12:35:53] 2025-02-25 20:35:23,616 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 12:35:53] 2025-02-25 20:35:23,616 | INFO     | summary of transferred files:
[2025-02-25 12:35:53] 2025-02-25 20:35:23,616 | INFO     |  -- lfn=log.43401137._000282.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 12:35:53] 2025-02-25 20:35:23,616 | INFO     | stage-out finished correctly
[2025-02-25 12:35:53] 2025-02-25 20:35:25,285 | INFO     | monitor loop #399: job 0:6530221905 is in state 'finished'
[2025-02-25 12:35:53] 2025-02-25 20:35:25,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 12:35:53] 2025-02-25 20:35:25,606 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 12:35:53] 2025-02-25 20:35:25,899 | INFO     | job 6530221905 has state=finished
[2025-02-25 12:35:53] 2025-02-25 20:35:25,899 | INFO     | preparing for final server update for job 6530221905 in state='finished'
[2025-02-25 12:35:53] 2025-02-25 20:35:25,900 | INFO     | this job has now completed (state=finished)
[2025-02-25 12:35:53] 2025-02-25 20:35:25,900 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 12:35:53] 2025-02-25 20:35:25,900 | INFO     | log transfer has been attempted: DONE
[2025-02-25 12:35:53] 2025-02-25 20:35:25,900 | INFO     | job 6530221905 has finished - writing final server update
[2025-02-25 12:35:53] 2025-02-25 20:35:25,900 | INFO     | total number of processed events: 400 (read)
[2025-02-25 12:35:53] 2025-02-25 20:35:25,949 | INFO     | executing command: lscpu
[2025-02-25 12:35:53] 2025-02-25 20:35:26,029 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2025-02-25 12:35:53] 2025-02-25 20:35:26,089 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 12:35:53] 2025-02-25 20:35:27,096 | INFO     | 5412s have passed since pilot start
[2025-02-25 12:35:53] 2025-02-25 20:35:27,790 | INFO     | monitor loop #400: job 0:6530221905 is in state 'finished'
[2025-02-25 12:35:53] 2025-02-25 20:35:27,791 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 12:35:53] 2025-02-25 20:35:30,295 | INFO     | monitor loop #401: job 0:6530221905 is in state 'finished'
[2025-02-25 12:35:53] 2025-02-25 20:35:30,295 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 12:35:53] 2025-02-25 20:35:32,804 | INFO     | monitor loop #402: job 0:6530221905 is in state 'finished'
[2025-02-25 12:35:53] 2025-02-25 20:35:32,804 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 12:35:53] 2025-02-25 20:35:33,107 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-25 12:35:53] 2025-02-25 20:35:33,108 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6530221905/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 12:35:53] 2025-02-25 20:35:33,109 | INFO     | extracted standard info from prmon json
[2025-02-25 12:35:53] 2025-02-25 20:35:33,109 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 12:35:53] 2025-02-25 20:35:33,109 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 12:35:53] 2025-02-25 20:35:33,118 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 12:35:53] 2025-02-25 20:35:33,119 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 12:35:53] 2025-02-25 20:35:33,120 | INFO     | fitting pss+swap vs Time
[2025-02-25 12:35:53] 2025-02-25 20:35:33,120 | INFO     | model: linear, x: [1740510697.0, 1740510758.0, 1740510819.0, 1740510880.0, 1740510941.0, 1740511002.0, 1740511063.0, 1740511124.0, 1740511185.0, 1740511246.0, 1740
[2025-02-25 12:35:53] 2025-02-25 20:35:33,120 | INFO     | sum of square deviations: 164771133.2098765
[2025-02-25 12:35:53] 2025-02-25 20:35:33,120 | INFO     | sum of deviations: 30925149223.246914
[2025-02-25 12:35:53] 2025-02-25 20:35:33,121 | INFO     | mean x: 1740513137.0987654
[2025-02-25 12:35:53] 2025-02-25 20:35:33,121 | INFO     | mean y: 2672421.4691358022
[2025-02-25 12:35:53] 2025-02-25 20:35:33,121 | INFO     | -- intersect: -326666371125.3806
[2025-02-25 12:35:53] 2025-02-25 20:35:33,121 | INFO     | intersect: -326666371125.3806
[2025-02-25 12:35:53] 2025-02-25 20:35:33,121 | INFO     | chi2: 2.1304290585877226
[2025-02-25 12:35:53] 2025-02-25 20:35:33,121 | INFO     | -- intersect: -326666371125.3806
[2025-02-25 12:35:53] 2025-02-25 20:35:33,121 | INFO     | current memory leak: 187.69 B/s (using 81 data points, chi2=2.13)
[2025-02-25 12:35:53] 2025-02-25 20:35:33,121 | INFO     | ..............................
[2025-02-25 12:35:53] 2025-02-25 20:35:33,121 | INFO     | . Timing measurements:
[2025-02-25 12:35:53] 2025-02-25 20:35:33,121 | INFO     | . get job = 0 s
[2025-02-25 12:35:53] 2025-02-25 20:35:33,121 | INFO     | . initial setup = 5 s
[2025-02-25 12:35:53] 2025-02-25 20:35:33,121 | INFO     | . payload setup = 19 s
[2025-02-25 12:35:53] 2025-02-25 20:35:33,121 | INFO     | . stage-in = 0 s
[2025-02-25 12:35:53] 2025-02-25 20:35:33,122 | INFO     | . payload execution = 5342 s
[2025-02-25 12:35:53] 2025-02-25 20:35:33,122 | INFO     | . stage-out = 0 s
[2025-02-25 12:35:53] 2025-02-25 20:35:33,122 | INFO     | . log creation = 0 s
[2025-02-25 12:35:53] 2025-02-25 20:35:33,122 | INFO     | ..............................
[2025-02-25 12:35:53] 2025-02-25 20:35:33,605 | INFO     | 
[2025-02-25 12:35:53] 2025-02-25 20:35:33,606 | INFO     | job summary report
[2025-02-25 12:35:53] 2025-02-25 20:35:33,606 | INFO     | --------------------------------------------------
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | PanDA job id: 6530221905
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | task id: 43401137
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | errors: (none)
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | pilot state: finished 
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | transexitcode: 0
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | exeerrorcode: 0
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | exeerrordiag: 
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | exitcode: 0
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | exitmsg: OK
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | cpuconsumptiontime: 25933 s
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | nevents: 400
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | neventsw: 0
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | pid: 1937562
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | pgrp: 1937562
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | corecount: 12
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | event service: False
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | sizes: {0: 2376953, 11: 2376953, 14: 2377187, 22: 2377215, 5365: 2403510, 5366: 2403509, 5367: 2412628, 5369: 2412684, 5376: 2412854}
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | --------------------------------------------------
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | 
[2025-02-25 12:35:53] 2025-02-25 20:35:33,607 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-02-25 12:35:53] 2025-02-25 20:35:33,670 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 12:35:53] 2025-02-25 20:35:33,670 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 12:35:53] 2025-02-25 20:35:33,670 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 12:35:53] 2025-02-25 20:35:33,670 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 12:35:53] 2025-02-25 20:35:33,670 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 12:35:53] 2025-02-25 20:35:33,670 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 12:35:53] 2025-02-25 20:35:33,670 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 12:35:53] 2025-02-25 20:35:33,670 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 12:35:53] 2025-02-25 20:35:33,670 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 12:35:53] 2025-02-25 20:35:33,670 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 12:35:53] 2025-02-25 20:35:33,670 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 12:35:53] 2025-02-25 20:35:33,670 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 12:35:53] 2025-02-25 20:35:33,671 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 12:35:53] 2025-02-25 20:35:33,671 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 12:35:53] 2025-02-25 20:35:33,671 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 12:35:53] 2025-02-25 20:35:33,671 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 12:35:53] 2025-02-25 20:35:33,671 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 12:35:53] 2025-02-25 20:35:33,671 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 12:35:53] 2025-02-25 20:35:33,671 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 12:35:53] 2025-02-25 20:35:33,671 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 12:35:53] 2025-02-25 20:35:33,671 | INFO     | job 6530221905 has completed (purged errors)
[2025-02-25 12:35:53] 2025-02-25 20:35:33,671 | INFO     | overall cleanup function is called
[2025-02-25 12:35:53] 2025-02-25 20:35:34,457 | INFO     | PID=1920715 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-25 12:35:53] 2025-02-25 20:35:34,458 | INFO     | .. there are 28 such processes running
[2025-02-25 12:35:53] 2025-02-25 20:35:34,693 | INFO     | --- collectZombieJob: --- 10, [1937562]
[2025-02-25 12:35:53] 2025-02-25 20:35:34,694 | INFO     | zombie collector waiting for pid 1937562
[2025-02-25 12:35:53] 2025-02-25 20:35:34,695 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 12:35:53] 2025-02-25 20:35:34,695 | INFO     | collected zombie processes
[2025-02-25 12:35:53] 2025-02-25 20:35:34,695 | INFO     | will attempt to kill all subprocesses of pid=1937562
[2025-02-25 12:35:53] 2025-02-25 20:35:34,793 | INFO     | process IDs to be killed: [1937562] (in reverse order)
[2025-02-25 12:35:53] 2025-02-25 20:35:34,864 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 12:35:53] 2025-02-25 20:35:34,864 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 12:35:53] 2025-02-25 20:35:34,885 | INFO     | did not find any defunct processes belonging to 1937562
[2025-02-25 12:35:53] 2025-02-25 20:35:34,930 | INFO     | did not find any defunct processes belonging to 1937562
[2025-02-25 12:35:53] 2025-02-25 20:35:34,930 | INFO     | ready for new job
[2025-02-25 12:35:53] 2025-02-25 20:35:34,930 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 12:35:53] 2025-02-25 20:35:34,932 | INFO     | **************************************
[2025-02-25 12:35:53] 2025-02-25 20:35:34,932 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 12:35:53] 2025-02-25 20:35:34,932 | INFO     | **************************************
[2025-02-25 12:35:53] 2025-02-25 20:35:34,932 | INFO     | 
[2025-02-25 12:35:53] 2025-02-25 20:35:34,936 | INFO     | architecture information:
[2025-02-25 12:35:53] 2025-02-25 20:35:34,936 | INFO     | executing command: cat /etc/os-release
[2025-02-25 12:35:53] 2025-02-25 20:35:34,949 | INFO     | cat /etc/os-release:
[2025-02-25 12:35:53] NAME="CentOS Linux"
[2025-02-25 12:35:53] VERSION="7 (Core)"
[2025-02-25 12:35:53] ID="centos"
[2025-02-25 12:35:53] ID_LIKE="rhel fedora"
[2025-02-25 12:35:53] VERSION_ID="7"
[2025-02-25 12:35:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 12:35:53] ANSI_COLOR="0;31"
[2025-02-25 12:35:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 12:35:53] HOME_URL="https://www.centos.org/"
[2025-02-25 12:35:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 12:35:53] 
[2025-02-25 12:35:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 12:35:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 12:35:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 12:35:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 12:35:53] 
[2025-02-25 12:35:53] 2025-02-25 20:35:34,949 | INFO     | **************************************
[2025-02-25 12:35:53] 2025-02-25 20:35:35,452 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-02-25 12:35:53] 2025-02-25 20:35:35,466 | INFO     | sufficient remaining disk space (1870748712960 B)
[2025-02-25 12:35:53] 2025-02-25 20:35:35,466 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 12:35:53] 2025-02-25 20:35:35,466 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 12:35:53] 2025-02-25 20:35:35,569 | INFO     | all data control threads have been joined
[2025-02-25 12:35:53] 2025-02-25 20:35:35,914 | INFO     | all payload control threads have been joined
[2025-02-25 12:35:53] 2025-02-25 20:35:36,314 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 12:35:53] 2025-02-25 20:35:36,314 | INFO     | aborting loop
[2025-02-25 12:35:53] 2025-02-25 20:35:36,436 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 12:35:53] 2025-02-25 20:35:36,474 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 12:35:53] 2025-02-25 20:35:36,475 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 12:35:53] 2025-02-25 20:35:36,475 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 12:35:53] 2025-02-25 20:35:36,477 | INFO     | [job] retrieve thread has finished
[2025-02-25 12:35:53] 2025-02-25 20:35:36,575 | INFO     | [data] control thread has finished
[2025-02-25 12:35:53] 2025-02-25 20:35:36,590 | INFO     | [payload] validate_post thread has finished
[2025-02-25 12:35:53] 2025-02-25 20:35:36,726 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 12:35:53] 2025-02-25 20:35:36,894 | INFO     | all job control threads have been joined
[2025-02-25 12:35:53] 2025-02-25 20:35:36,920 | INFO     | [payload] control thread has finished
[2025-02-25 12:35:53] 2025-02-25 20:35:37,125 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 12:35:53] 2025-02-25 20:35:37,320 | INFO     | [job] job monitor thread has finished
[2025-02-25 12:35:53] 2025-02-25 20:35:37,657 | INFO     | [payload] failed_post thread has finished
[2025-02-25 12:35:53] 2025-02-25 20:35:37,750 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 12:35:53] 2025-02-25 20:35:37,767 | INFO     | [job] validate thread has finished
[2025-02-25 12:35:53] 2025-02-25 20:35:37,771 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 12:35:53] 2025-02-25 20:35:37,775 | INFO     | [data] copytool_in thread has finished
[2025-02-25 12:35:53] 2025-02-25 20:35:37,900 | INFO     | [job] control thread has finished
[2025-02-25 12:35:53] 2025-02-25 20:35:38,203 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 12:35:53] 2025-02-25 20:35:38,733 | INFO     | [data] copytool_out thread has finished
[2025-02-25 12:35:53] 2025-02-25 20:35:39,209 | INFO     | [job] queue monitor thread has finished
[2025-02-25 12:35:53] 2025-02-25 20:35:40,445 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 12:35:53] 2025-02-25 20:35:45,552 | INFO     | job.realtimelogging is not enabled
[2025-02-25 12:35:53] 2025-02-25 20:35:46,558 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 12:35:53] 2025-02-25 20:35:47,755 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140439753926464)>', '<ExcThread(monitor, started 140439340422912)>']
[2025-02-25 12:35:53] 2025-02-25 20:35:48,547 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 12:35:53] 2025-02-25 20:35:48,547 | INFO     | [monitor] control thread has ended
[2025-02-25 12:35:53] 2025-02-25 20:35:52,781 | INFO     | all workflow threads have been joined
[2025-02-25 12:35:53] 2025-02-25 20:35:52,781 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 12:35:53] 2025-02-25 20:35:52,782 | INFO     | traces error code: 0
[2025-02-25 12:35:53] 2025-02-25 20:35:52,782 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 12:35:53] 2025-02-25 20:35:53,076 [wrapper] ==== pilot stdout END ====
[2025-02-25 12:35:53] 2025-02-25 20:35:53,102 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 12:35:53] 2025-02-25 20:35:53,137 [wrapper] pilotpid: 1920715
[2025-02-25 12:35:53] 2025-02-25 20:35:53,149 [wrapper] Pilot exit status: 0
[2025-02-25 12:35:53] 2025-02-25 20:35:53,159 [wrapper] pandaids: 6530221905
[2025-02-25 12:35:53] 2025-02-25 20:35:53,213 [wrapper] cleanup supervisor_pilot 2242285 1920716
[2025-02-25 12:35:53] 2025-02-25 20:35:53,216 [wrapper] Test setup, not cleaning
[2025-02-25 12:35:53] 2025-02-25 20:35:53,220 [wrapper] apfmon messages muted
[2025-02-25 12:35:53] 2025-02-25 20:35:53,221 [wrapper] ==== wrapper stdout END ====
[2025-02-25 12:35:53] 2025-02-25 20:35:53,223 [wrapper] ==== wrapper stderr END ====
[2025-02-25 12:35:53]  *** Error codes and diagnostics ***
[2025-02-25 12:35:53]     "exeErrorCode": 0,
[2025-02-25 12:35:53]     "exeErrorDiag": "",
[2025-02-25 12:35:53]     "pilotErrorCode": 0,
[2025-02-25 12:35:53]     "pilotErrorDiag": "",
[2025-02-25 12:35:53]  *** Listing of results directory ***
[2025-02-25 12:35:53] total 434264
[2025-02-25 12:35:53] -rw-r--r--. 1 boinc boinc    491065 Feb 25 04:15 pilot3.tar.gz
[2025-02-25 12:35:53] -rw-r--r--. 1 boinc boinc      5118 Feb 25 04:18 queuedata.json
[2025-02-25 12:35:53] -rwx------. 1 boinc boinc     35865 Feb 25 04:18 runpilot2-wrapper.sh
[2025-02-25 12:35:53] -rw-r--r--. 1 boinc boinc       100 Feb 25 11:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 12:35:53] -rwxr-xr-x. 1 boinc boinc      7986 Feb 25 11:04 run_atlas
[2025-02-25 12:35:53] -rw-r--r--. 1 boinc boinc       105 Feb 25 11:04 job.xml
[2025-02-25 12:35:53] -rw-r--r--. 1 boinc boinc      6605 Feb 25 11:04 init_data.xml
[2025-02-25 12:35:53] -rw-r--r--. 2 boinc boinc 252492299 Feb 25 11:04 EVNT.43401135._000016.pool.root.1
[2025-02-25 12:35:53] -rw-r--r--. 2 boinc boinc    503552 Feb 25 11:04 input.tar.gz
[2025-02-25 12:35:53] drwxrwx--x. 2 boinc boinc      4096 Feb 25 11:04 shared
[2025-02-25 12:35:53] -rw-r--r--. 2 boinc boinc     17569 Feb 25 11:04 start_atlas.sh
[2025-02-25 12:35:53] -rw-r--r--. 1 boinc boinc         0 Feb 25 11:04 boinc_lockfile
[2025-02-25 12:35:53] -rw-r--r--. 1 boinc boinc      2556 Feb 25 11:04 pandaJob.out
[2025-02-25 12:35:53] -rw-------. 1 boinc boinc       424 Feb 25 11:04 setup.sh.local
[2025-02-25 12:35:53] -rw-------. 1 boinc boinc    988266 Feb 25 11:05 agis_schedconf.cvmfs.json
[2025-02-25 12:35:53] -rw-------. 1 boinc boinc   1577983 Feb 25 11:05 agis_ddmendpoints.agis.ALL.json
[2025-02-25 12:35:53] drwx------. 4 boinc boinc      4096 Feb 25 11:05 pilot3
[2025-02-25 12:35:53] -rw-------. 1 boinc boinc 186645003 Feb 25 12:34 HITS.43401137._000282.pool.root.1
[2025-02-25 12:35:53] -rw-r--r--. 1 boinc boinc       529 Feb 25 12:34 boinc_task_state.xml
[2025-02-25 12:35:53] -rw-------. 1 boinc boinc      1039 Feb 25 12:35 memory_monitor_summary.json
[2025-02-25 12:35:53] -rw-------. 1 boinc boinc    361195 Feb 25 12:35 log.43401137._000282.job.log.tgz.1
[2025-02-25 12:35:53] -rw-------. 1 boinc boinc      7737 Feb 25 12:35 heartbeat.json
[2025-02-25 12:35:53] -rw-------. 1 boinc boinc        95 Feb 25 12:35 pilot_heartbeat.json
[2025-02-25 12:35:53] -rw-r--r--. 1 boinc boinc      8192 Feb 25 12:35 boinc_mmap_file
[2025-02-25 12:35:53] -rw-r--r--. 1 boinc boinc        27 Feb 25 12:35 wrapper_checkpoint.txt
[2025-02-25 12:35:53] -rw-------. 1 boinc boinc      4286 Feb 25 12:35 pilotlog.txt
[2025-02-25 12:35:53] -rw-------. 1 boinc boinc    513583 Feb 25 12:35 log.43401137._000282.job.log.1
[2025-02-25 12:35:53] -rw-------. 1 boinc boinc       357 Feb 25 12:35 output.list
[2025-02-25 12:35:53] -rw-r--r--. 1 boinc boinc       620 Feb 25 12:35 runtime_log
[2025-02-25 12:35:53] -rw-------. 1 boinc boinc    890880 Feb 25 12:35 result.tar.gz
[2025-02-25 12:35:53] -rw-r--r--. 1 boinc boinc     11144 Feb 25 12:35 runtime_log.err
[2025-02-25 12:35:53] -rw-------. 1 boinc boinc       659 Feb 25 12:35 m0nMDmV4866n9Rq4apOajLDm4fhM0noT9bVoFjIUDmpWfKDm1h7vMo.diag
[2025-02-25 12:35:53] -rw-r--r--. 1 boinc boinc     22026 Feb 25 12:35 stderr.txt
[2025-02-25 12:35:53] HITS file was successfully produced:
[2025-02-25 12:35:53] -rw-------. 1 boinc boinc 186645003 Feb 25 12:34 shared/HITS.pool.root.1
[2025-02-25 12:35:53]  *** Contents of shared directory: ***
[2025-02-25 12:35:53] total 430236
[2025-02-25 12:35:53] -rw-r--r--. 2 boinc boinc 252492299 Feb 25 11:04 ATLAS.root_0
[2025-02-25 12:35:53] -rw-r--r--. 2 boinc boinc    503552 Feb 25 11:04 input.tar.gz
[2025-02-25 12:35:53] -rw-r--r--. 2 boinc boinc     17569 Feb 25 11:04 start_atlas.sh
[2025-02-25 12:35:53] -rw-------. 1 boinc boinc 186645003 Feb 25 12:34 HITS.pool.root.1
[2025-02-25 12:35:53] -rw-------. 1 boinc boinc    890880 Feb 25 12:35 result.tar.gz
12:35:54 (1915990): run_atlas exited; CPU time 25909.922450
12:35:54 (1915990): called boinc_finish(0)

</stderr_txt>
]]>

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