Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:11:16 (3308): wrapper (7.7.26015): starting
07:11:16 (3308): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 07:11:16] Arguments: --nthreads 12
[2025-02-25 07:11:16] Threads: 12
[2025-02-25 07:11:16] Checking for CVMFS
[2025-02-25 07:11:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 07:11:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 07:11:16] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 07:11:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 07:11:16] 2.11.2.0 13814 323042 146596 143038 2 55 16394957 20275201 1 130560 0 23686318 99.943 8360232 40585 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 07:11:16] CVMFS is ok
[2025-02-25 07:11:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 07:11:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 07:11:16] Further information can be found at the LHC@home message board.
[2025-02-25 07:11:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 07:11:16] Checking for apptainer binary...
[2025-02-25 07:11:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 07:11:16] Running /usr/bin/apptainer --version
[2025-02-25 07:11:16] apptainer version 1.3.2-1.el7
[2025-02-25 07:11:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 07:11:18] c-205-7.aglt2.org
[2025-02-25 07:11:18] apptainer works
[2025-02-25 07:11:18] Set ATHENA_PROC_NUMBER=12
[2025-02-25 07:11:18] Set ATHENA_CORE_NUMBER=12
[2025-02-25 07:11:18] Starting ATLAS job with PandaID=6530163241
[2025-02-25 07:11:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 08:35:33]  *** The last 200 lines of the pilot log: ***
[2025-02-25 08:35:33]  guid=06f5e9e1-e8e5-43f4-817f-dbbff6c98852
[2025-02-25 08:35:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-25 08:35:33]  is_altstaged=None
[2025-02-25 08:35:33]  is_tar=False
[2025-02-25 08:35:33]  lfn=log.43401121._001146.job.log.tgz.1
[2025-02-25 08:35:33]  mtime=0
[2025-02-25 08:35:33]  protocol_id=None
[2025-02-25 08:35:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 08:35:33]  replicas=None
[2025-02-25 08:35:33]  scope=mc23_13p6TeV
[2025-02-25 08:35:33]  status=None
[2025-02-25 08:35:33]  status_code=0
[2025-02-25 08:35:33]  storage_token=
[2025-02-25 08:35:33]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530163241/log.43401121._001146.job.log.tgz.1
[2025-02-25 08:35:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/aa/log.43401121._001146.job.log.tgz.1
[2025-02-25 08:35:33]  workdir=None
[2025-02-25 08:35:33] ]
[2025-02-25 08:35:33] 2025-02-25 13:35:06,902 | INFO     | transferring file log.43401121._001146.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530163241/log.43401121._001146.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 08:35:33] 2025-02-25 13:35:06,902 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530163241/log.43401121._001146.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401121._001146.job
[2025-02-25 08:35:33] 2025-02-25 13:35:06,924 | INFO     | adding to output.list: log.43401121._001146.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/aa/log.43401121._001146.job.log.tg
[2025-02-25 08:35:33] 2025-02-25 13:35:06,925 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 08:35:33] 2025-02-25 13:35:06,925 | INFO     | summary of transferred files:
[2025-02-25 08:35:33] 2025-02-25 13:35:06,925 | INFO     |  -- lfn=log.43401121._001146.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 08:35:33] 2025-02-25 13:35:06,926 | INFO     | stage-out finished correctly
[2025-02-25 08:35:33] 2025-02-25 13:35:07,012 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 08:35:33] 2025-02-25 13:35:07,733 | INFO     | monitor loop #368: job 0:6530163241 is in state 'finished'
[2025-02-25 08:35:33] 2025-02-25 13:35:07,733 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 08:35:33] 2025-02-25 13:35:09,395 | INFO     | job 6530163241 has state=finished
[2025-02-25 08:35:33] 2025-02-25 13:35:09,395 | INFO     | preparing for final server update for job 6530163241 in state='finished'
[2025-02-25 08:35:33] 2025-02-25 13:35:09,396 | INFO     | this job has now completed (state=finished)
[2025-02-25 08:35:33] 2025-02-25 13:35:09,396 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 08:35:33] 2025-02-25 13:35:09,396 | INFO     | log transfer has been attempted: DONE
[2025-02-25 08:35:33] 2025-02-25 13:35:09,396 | INFO     | job 6530163241 has finished - writing final server update
[2025-02-25 08:35:33] 2025-02-25 13:35:09,397 | INFO     | total number of processed events: 400 (read)
[2025-02-25 08:35:33] 2025-02-25 13:35:09,398 | INFO     | executing command: lscpu
[2025-02-25 08:35:33] 2025-02-25 13:35:09,424 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 08:35:33] 2025-02-25 13:35:09,438 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 08:35:33] 2025-02-25 13:35:10,236 | INFO     | monitor loop #369: job 0:6530163241 is in state 'finished'
[2025-02-25 08:35:33] 2025-02-25 13:35:10,243 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 08:35:33] 2025-02-25 13:35:12,746 | INFO     | monitor loop #370: job 0:6530163241 is in state 'finished'
[2025-02-25 08:35:33] 2025-02-25 13:35:12,746 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 08:35:33] 2025-02-25 13:35:14,514 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 08:35:33] 2025-02-25 13:35:14,514 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530163241/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 08:35:33] 2025-02-25 13:35:14,515 | INFO     | extracted standard info from prmon json
[2025-02-25 08:35:33] 2025-02-25 13:35:14,515 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 08:35:33] 2025-02-25 13:35:14,516 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 08:35:33] 2025-02-25 13:35:14,516 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 08:35:33] 2025-02-25 13:35:14,516 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 08:35:33] 2025-02-25 13:35:14,518 | INFO     | fitting pss+swap vs Time
[2025-02-25 08:35:33] 2025-02-25 13:35:14,518 | INFO     | model: linear, x: [1740485825.0, 1740485886.0, 1740485947.0, 1740486008.0, 1740486069.0, 1740486130.0, 1740486191.0, 1740486252.0, 1740486313.0, 1740486374.0, 1740
[2025-02-25 08:35:33] 2025-02-25 13:35:14,518 | INFO     | sum of square deviations: 130793150.0
[2025-02-25 08:35:33] 2025-02-25 13:35:14,519 | INFO     | sum of deviations: 29011056490.000004
[2025-02-25 08:35:33] 2025-02-25 13:35:14,519 | INFO     | mean x: 1740488082.0
[2025-02-25 08:35:33] 2025-02-25 13:35:14,519 | INFO     | mean y: 2572160.013333333
[2025-02-25 08:35:33] 2025-02-25 13:35:14,519 | INFO     | -- intersect: -386052798989.5749
[2025-02-25 08:35:33] 2025-02-25 13:35:14,519 | INFO     | intersect: -386052798989.5749
[2025-02-25 08:35:33] 2025-02-25 13:35:14,519 | INFO     | chi2: 2.691326308713044
[2025-02-25 08:35:33] 2025-02-25 13:35:14,520 | INFO     | -- intersect: -386052798989.5749
[2025-02-25 08:35:33] 2025-02-25 13:35:14,520 | INFO     | current memory leak: 221.81 B/s (using 75 data points, chi2=2.69)
[2025-02-25 08:35:33] 2025-02-25 13:35:14,520 | INFO     | ..............................
[2025-02-25 08:35:33] 2025-02-25 13:35:14,520 | INFO     | . Timing measurements:
[2025-02-25 08:35:33] 2025-02-25 13:35:14,520 | INFO     | . get job = 0 s
[2025-02-25 08:35:33] 2025-02-25 13:35:14,520 | INFO     | . initial setup = 2 s
[2025-02-25 08:35:33] 2025-02-25 13:35:14,520 | INFO     | . payload setup = 7 s
[2025-02-25 08:35:33] 2025-02-25 13:35:14,521 | INFO     | . stage-in = 0 s
[2025-02-25 08:35:33] 2025-02-25 13:35:14,521 | INFO     | . payload execution = 4987 s
[2025-02-25 08:35:33] 2025-02-25 13:35:14,521 | INFO     | . stage-out = 0 s
[2025-02-25 08:35:33] 2025-02-25 13:35:14,521 | INFO     | . log creation = 0 s
[2025-02-25 08:35:33] 2025-02-25 13:35:14,521 | INFO     | ..............................
[2025-02-25 08:35:33] 2025-02-25 13:35:14,603 | INFO     | 
[2025-02-25 08:35:33] 2025-02-25 13:35:14,604 | INFO     | job summary report
[2025-02-25 08:35:33] 2025-02-25 13:35:14,604 | INFO     | --------------------------------------------------
[2025-02-25 08:35:33] 2025-02-25 13:35:14,604 | INFO     | PanDA job id: 6530163241
[2025-02-25 08:35:33] 2025-02-25 13:35:14,604 | INFO     | task id: 43401121
[2025-02-25 08:35:33] 2025-02-25 13:35:14,604 | INFO     | errors: (none)
[2025-02-25 08:35:33] 2025-02-25 13:35:14,605 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 08:35:33] 2025-02-25 13:35:14,605 | INFO     | pilot state: finished 
[2025-02-25 08:35:33] 2025-02-25 13:35:14,605 | INFO     | transexitcode: 0
[2025-02-25 08:35:33] 2025-02-25 13:35:14,605 | INFO     | exeerrorcode: 0
[2025-02-25 08:35:33] 2025-02-25 13:35:14,605 | INFO     | exeerrordiag: 
[2025-02-25 08:35:33] 2025-02-25 13:35:14,605 | INFO     | exitcode: 0
[2025-02-25 08:35:33] 2025-02-25 13:35:14,606 | INFO     | exitmsg: OK
[2025-02-25 08:35:33] 2025-02-25 13:35:14,606 | INFO     | cpuconsumptiontime: 47251 s
[2025-02-25 08:35:33] 2025-02-25 13:35:14,606 | INFO     | nevents: 400
[2025-02-25 08:35:33] 2025-02-25 13:35:14,606 | INFO     | neventsw: 0
[2025-02-25 08:35:33] 2025-02-25 13:35:14,606 | INFO     | pid: 14253
[2025-02-25 08:35:33] 2025-02-25 13:35:14,606 | INFO     | pgrp: 14253
[2025-02-25 08:35:33] 2025-02-25 13:35:14,606 | INFO     | corecount: 12
[2025-02-25 08:35:33] 2025-02-25 13:35:14,606 | INFO     | event service: False
[2025-02-25 08:35:33] 2025-02-25 13:35:14,606 | INFO     | sizes: {0: 2383354, 1: 2383382, 6: 2383588, 11: 2383616, 4999: 2409698, 5000: 2418823, 5008: 2418937}
[2025-02-25 08:35:33] 2025-02-25 13:35:14,606 | INFO     | --------------------------------------------------
[2025-02-25 08:35:33] 2025-02-25 13:35:14,607 | INFO     | 
[2025-02-25 08:35:33] 2025-02-25 13:35:14,607 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 08:35:33] 2025-02-25 13:35:14,632 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 08:35:33] 2025-02-25 13:35:14,632 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 08:35:33] 2025-02-25 13:35:14,633 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 08:35:33] 2025-02-25 13:35:14,633 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 08:35:33] 2025-02-25 13:35:14,633 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 08:35:33] 2025-02-25 13:35:14,633 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 08:35:33] 2025-02-25 13:35:14,633 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 08:35:33] 2025-02-25 13:35:14,633 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 08:35:33] 2025-02-25 13:35:14,633 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 08:35:33] 2025-02-25 13:35:14,634 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 08:35:33] 2025-02-25 13:35:14,634 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 08:35:33] 2025-02-25 13:35:14,634 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 08:35:33] 2025-02-25 13:35:14,634 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 08:35:33] 2025-02-25 13:35:14,634 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 08:35:33] 2025-02-25 13:35:14,634 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 08:35:33] 2025-02-25 13:35:14,634 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 08:35:33] 2025-02-25 13:35:14,635 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 08:35:33] 2025-02-25 13:35:14,635 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 08:35:33] 2025-02-25 13:35:14,635 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 08:35:33] 2025-02-25 13:35:14,635 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 08:35:33] 2025-02-25 13:35:14,635 | INFO     | job 6530163241 has completed (purged errors)
[2025-02-25 08:35:33] 2025-02-25 13:35:14,635 | INFO     | overall cleanup function is called
[2025-02-25 08:35:33] 2025-02-25 13:35:15,643 | INFO     | --- collectZombieJob: --- 10, [14253]
[2025-02-25 08:35:33] 2025-02-25 13:35:15,644 | INFO     | zombie collector waiting for pid 14253
[2025-02-25 08:35:33] 2025-02-25 13:35:15,644 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 08:35:33] 2025-02-25 13:35:15,644 | INFO     | collected zombie processes
[2025-02-25 08:35:33] 2025-02-25 13:35:15,644 | INFO     | will attempt to kill all subprocesses of pid=14253
[2025-02-25 08:35:33] 2025-02-25 13:35:15,710 | INFO     | process IDs to be killed: [14253] (in reverse order)
[2025-02-25 08:35:33] 2025-02-25 13:35:15,756 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 08:35:33] 2025-02-25 13:35:15,756 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 08:35:33] 2025-02-25 13:35:15,759 | INFO     | did not find any defunct processes belonging to 14253
[2025-02-25 08:35:33] 2025-02-25 13:35:15,762 | INFO     | did not find any defunct processes belonging to 14253
[2025-02-25 08:35:33] 2025-02-25 13:35:15,763 | INFO     | ready for new job
[2025-02-25 08:35:33] 2025-02-25 13:35:15,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 08:35:33] 2025-02-25 13:35:15,764 | INFO     | **************************************
[2025-02-25 08:35:33] 2025-02-25 13:35:15,764 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 08:35:33] 2025-02-25 13:35:15,764 | INFO     | **************************************
[2025-02-25 08:35:33] 2025-02-25 13:35:15,765 | INFO     | 
[2025-02-25 08:35:33] 2025-02-25 13:35:15,765 | INFO     | architecture information:
[2025-02-25 08:35:33] 2025-02-25 13:35:15,766 | INFO     | executing command: cat /etc/os-release
[2025-02-25 08:35:33] 2025-02-25 13:35:15,780 | INFO     | cat /etc/os-release:
[2025-02-25 08:35:33] NAME="CentOS Linux"
[2025-02-25 08:35:33] VERSION="7 (Core)"
[2025-02-25 08:35:33] ID="centos"
[2025-02-25 08:35:33] ID_LIKE="rhel fedora"
[2025-02-25 08:35:33] VERSION_ID="7"
[2025-02-25 08:35:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 08:35:33] ANSI_COLOR="0;31"
[2025-02-25 08:35:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 08:35:33] HOME_URL="https://www.centos.org/"
[2025-02-25 08:35:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 08:35:33] 
[2025-02-25 08:35:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 08:35:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 08:35:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 08:35:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 08:35:33] 
[2025-02-25 08:35:33] 2025-02-25 13:35:15,781 | INFO     | **************************************
[2025-02-25 08:35:33] 2025-02-25 13:35:16,284 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 08:35:33] 2025-02-25 13:35:16,302 | INFO     | sufficient remaining disk space (29353836544 B)
[2025-02-25 08:35:33] 2025-02-25 13:35:16,302 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 08:35:33] 2025-02-25 13:35:16,302 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 08:35:33] 2025-02-25 13:35:16,303 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 08:35:33] 2025-02-25 13:35:16,303 | INFO     | aborting loop
[2025-02-25 08:35:33] 2025-02-25 13:35:16,303 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 08:35:33] 2025-02-25 13:35:16,636 | INFO     | all data control threads have been joined
[2025-02-25 08:35:33] 2025-02-25 13:35:16,779 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 08:35:33] 2025-02-25 13:35:16,779 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 08:35:33] 2025-02-25 13:35:16,779 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 08:35:33] 2025-02-25 13:35:16,891 | INFO     | all job control threads have been joined
[2025-02-25 08:35:33] 2025-02-25 13:35:17,304 | INFO     | [job] job monitor thread has finished
[2025-02-25 08:35:33] 2025-02-25 13:35:17,308 | INFO     | [job] retrieve thread has finished
[2025-02-25 08:35:33] 2025-02-25 13:35:17,309 | INFO     | [job] queue monitor thread has finished
[2025-02-25 08:35:33] 2025-02-25 13:35:17,538 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 08:35:33] 2025-02-25 13:35:17,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 08:35:33] 2025-02-25 13:35:17,642 | INFO     | [data] control thread has finished
[2025-02-25 08:35:33] 2025-02-25 13:35:17,643 | INFO     | [job] validate thread has finished
[2025-02-25 08:35:33] 2025-02-25 13:35:17,752 | INFO     | all payload control threads have been joined
[2025-02-25 08:35:33] 2025-02-25 13:35:17,852 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 08:35:33] 2025-02-25 13:35:17,896 | INFO     | [job] control thread has finished
[2025-02-25 08:35:33] 2025-02-25 13:35:17,964 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 08:35:33] 2025-02-25 13:35:18,064 | INFO     | [payload] validate_post thread has finished
[2025-02-25 08:35:33] 2025-02-25 13:35:18,239 | INFO     | [payload] failed_post thread has finished
[2025-02-25 08:35:33] 2025-02-25 13:35:18,417 | INFO     | [data] copytool_in thread has finished
[2025-02-25 08:35:33] 2025-02-25 13:35:18,760 | INFO     | [payload] control thread has finished
[2025-02-25 08:35:33] 2025-02-25 13:35:18,790 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 08:35:33] 2025-02-25 13:35:19,544 | INFO     | [data] copytool_out thread has finished
[2025-02-25 08:35:33] 2025-02-25 13:35:21,609 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 08:35:33] 2025-02-25 13:35:26,355 | INFO     | job.realtimelogging is not enabled
[2025-02-25 08:35:33] 2025-02-25 13:35:27,360 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 08:35:33] 2025-02-25 13:35:28,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140206210127680)>', '<ExcThread(monitor, started 140205096949504)>']
[2025-02-25 08:35:33] 2025-02-25 13:35:28,826 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 08:35:33] 2025-02-25 13:35:28,826 | INFO     | [monitor] control thread has ended
[2025-02-25 08:35:33] 2025-02-25 13:35:33,496 | INFO     | all workflow threads have been joined
[2025-02-25 08:35:33] 2025-02-25 13:35:33,496 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 08:35:33] 2025-02-25 13:35:33,496 | INFO     | traces error code: 0
[2025-02-25 08:35:33] 2025-02-25 13:35:33,497 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 08:35:33] 2025-02-25 13:35:33,588 [wrapper] ==== pilot stdout END ====
[2025-02-25 08:35:33] 2025-02-25 13:35:33,592 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 08:35:33] 2025-02-25 13:35:33,595 [wrapper] pilotpid: 7554
[2025-02-25 08:35:33] 2025-02-25 13:35:33,599 [wrapper] Pilot exit status: 0
[2025-02-25 08:35:33] 2025-02-25 13:35:33,613 [wrapper] pandaids: 6530163241
[2025-02-25 08:35:33] 2025-02-25 13:35:33,654 [wrapper] cleanup supervisor_pilot  4485 7555
[2025-02-25 08:35:33] 2025-02-25 13:35:33,658 [wrapper] Test setup, not cleaning
[2025-02-25 08:35:33] 2025-02-25 13:35:33,665 [wrapper] apfmon messages muted
[2025-02-25 08:35:33] 2025-02-25 13:35:33,669 [wrapper] ==== wrapper stdout END ====
[2025-02-25 08:35:33] 2025-02-25 13:35:33,673 [wrapper] ==== wrapper stderr END ====
[2025-02-25 08:35:33]  *** Error codes and diagnostics ***
[2025-02-25 08:35:33]     "exeErrorCode": 0,
[2025-02-25 08:35:33]     "exeErrorDiag": "",
[2025-02-25 08:35:33]     "pilotErrorCode": 0,
[2025-02-25 08:35:33]     "pilotErrorDiag": "",
[2025-02-25 08:35:33]  *** Listing of results directory ***
[2025-02-25 08:35:33] total 436208
[2025-02-25 08:35:33] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 06:17 pilot3.tar.gz
[2025-02-25 08:35:33] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 06:42 queuedata.json
[2025-02-25 08:35:33] -rwx------ 1 boincer umatlas     35865 Feb 25 06:43 runpilot2-wrapper.sh
[2025-02-25 08:35:33] -rw-r--r-- 1 boincer umatlas       100 Feb 25 07:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 08:35:33] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 07:11 run_atlas
[2025-02-25 08:35:33] -rw-r--r-- 1 boincer umatlas       105 Feb 25 07:11 job.xml
[2025-02-25 08:35:33] -rw-r--r-- 2 boincer umatlas 253080876 Feb 25 07:11 EVNT.43401119._000050.pool.root.1
[2025-02-25 08:35:33] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 07:11 start_atlas.sh
[2025-02-25 08:35:33] drwxrwx--x 2 boincer umatlas      4096 Feb 25 07:11 shared
[2025-02-25 08:35:33] -rw-r--r-- 2 boincer umatlas    503550 Feb 25 07:11 input.tar.gz
[2025-02-25 08:35:33] -rw-r--r-- 1 boincer umatlas         0 Feb 25 07:11 boinc_lockfile
[2025-02-25 08:35:33] -rw-r--r-- 1 boincer umatlas      2539 Feb 25 07:11 pandaJob.out
[2025-02-25 08:35:33] -rw------- 1 boincer umatlas       424 Feb 25 07:11 setup.sh.local
[2025-02-25 08:35:33] -rw------- 1 boincer umatlas    989526 Feb 25 07:11 agis_schedconf.cvmfs.json
[2025-02-25 08:35:33] -rw------- 1 boincer umatlas   1582519 Feb 25 07:11 agis_ddmendpoints.agis.ALL.json
[2025-02-25 08:35:33] drwx------ 4 boincer umatlas      4096 Feb 25 07:11 pilot3
[2025-02-25 08:35:33] -rw-r--r-- 1 boincer umatlas      5868 Feb 25 08:31 init_data.xml
[2025-02-25 08:35:33] -rw------- 1 boincer umatlas        95 Feb 25 08:34 pilot_heartbeat.json
[2025-02-25 08:35:33] -rw------- 1 boincer umatlas 188108015 Feb 25 08:34 HITS.43401121._001146.pool.root.1
[2025-02-25 08:35:33] -rw-r--r-- 1 boincer umatlas       529 Feb 25 08:34 boinc_task_state.xml
[2025-02-25 08:35:33] -rw------- 1 boincer umatlas      1044 Feb 25 08:35 memory_monitor_summary.json
[2025-02-25 08:35:33] -rw------- 1 boincer umatlas    376705 Feb 25 08:35 log.43401121._001146.job.log.tgz.1
[2025-02-25 08:35:33] -rw------- 1 boincer umatlas      7757 Feb 25 08:35 heartbeat.json
[2025-02-25 08:35:33] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 08:35 boinc_mmap_file
[2025-02-25 08:35:33] -rw-r--r-- 1 boincer umatlas        27 Feb 25 08:35 wrapper_checkpoint.txt
[2025-02-25 08:35:33] -rw------- 1 boincer umatlas      4287 Feb 25 08:35 pilotlog.txt
[2025-02-25 08:35:33] -rw------- 1 boincer umatlas    468382 Feb 25 08:35 log.43401121._001146.job.log.1
[2025-02-25 08:35:33] -rw------- 1 boincer umatlas       357 Feb 25 08:35 output.list
[2025-02-25 08:35:33] -rw-r--r-- 1 boincer umatlas       620 Feb 25 08:35 runtime_log
[2025-02-25 08:35:33] -rw------- 1 boincer umatlas    860160 Feb 25 08:35 result.tar.gz
[2025-02-25 08:35:33] -rw------- 1 boincer umatlas       657 Feb 25 08:35 vEhKDmEW866nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmNHwKDmjao5Qm.diag
[2025-02-25 08:35:33] -rw-r--r-- 1 boincer umatlas     11010 Feb 25 08:35 runtime_log.err
[2025-02-25 08:35:33] -rw-r--r-- 1 boincer umatlas     21396 Feb 25 08:35 stderr.txt
[2025-02-25 08:35:33] HITS file was successfully produced:
[2025-02-25 08:35:33] -rw------- 1 boincer umatlas 188108015 Feb 25 08:34 shared/HITS.pool.root.1
[2025-02-25 08:35:33]  *** Contents of shared directory: ***
[2025-02-25 08:35:33] total 432208
[2025-02-25 08:35:33] -rw-r--r-- 2 boincer umatlas 253080876 Feb 25 07:11 ATLAS.root_0
[2025-02-25 08:35:33] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 07:11 start_atlas.sh
[2025-02-25 08:35:33] -rw-r--r-- 2 boincer umatlas    503550 Feb 25 07:11 input.tar.gz
[2025-02-25 08:35:33] -rw------- 1 boincer umatlas 188108015 Feb 25 08:34 HITS.pool.root.1
[2025-02-25 08:35:33] -rw------- 1 boincer umatlas    860160 Feb 25 08:35 result.tar.gz
08:35:35 (3308): run_atlas exited; CPU time 47186.264665
08:35:35 (3308): called boinc_finish(0)

</stderr_txt>
]]>

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