Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:42:50 (14337): wrapper (7.7.26015): starting
06:42:50 (14337): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 06:42:50] Arguments: --nthreads 12
[2025-02-25 06:42:50] Threads: 12
[2025-02-25 06:42:50] Checking for CVMFS
[2025-02-25 06:42:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 06:42:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 06:42:50] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 06:42:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 06:42:50] 2.11.2.0 25961 308673 151224 143037 0 57 19773679 20275200 1 130560 0 24183028 99.986 7607194 41815 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 06:42:50] CVMFS is ok
[2025-02-25 06:42:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 06:42:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 06:42:50] Further information can be found at the LHC@home message board.
[2025-02-25 06:42:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 06:42:50] Checking for apptainer binary...
[2025-02-25 06:42:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 06:42:50] Running /usr/bin/apptainer --version
[2025-02-25 06:42:50] apptainer version 1.3.2-1.el7
[2025-02-25 06:42:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 06:42:52] c-205-5.aglt2.org
[2025-02-25 06:42:52] apptainer works
[2025-02-25 06:42:52] Set ATHENA_PROC_NUMBER=12
[2025-02-25 06:42:52] Set ATHENA_CORE_NUMBER=12
[2025-02-25 06:42:52] Starting ATLAS job with PandaID=6530163328
[2025-02-25 06:42:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 08:07:06]  *** The last 200 lines of the pilot log: ***
[2025-02-25 08:07:06]  filetype=log
[2025-02-25 08:07:06]  guid=cddd4db7-85e8-4ec1-84ad-25fcbb7275d7
[2025-02-25 08:07:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-25 08:07:06]  is_altstaged=None
[2025-02-25 08:07:06]  is_tar=False
[2025-02-25 08:07:06]  lfn=log.43401121._001233.job.log.tgz.1
[2025-02-25 08:07:06]  mtime=0
[2025-02-25 08:07:06]  protocol_id=None
[2025-02-25 08:07:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 08:07:06]  replicas=None
[2025-02-25 08:07:06]  scope=mc23_13p6TeV
[2025-02-25 08:07:06]  status=None
[2025-02-25 08:07:06]  status_code=0
[2025-02-25 08:07:06]  storage_token=
[2025-02-25 08:07:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530163328/log.43401121._001233.job.log.tgz.1
[2025-02-25 08:07:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/ee/log.43401121._001233.job.log.tgz.1
[2025-02-25 08:07:06]  workdir=None
[2025-02-25 08:07:06] ]
[2025-02-25 08:07:06] 2025-02-25 13:06:46,337 | INFO     | transferring file log.43401121._001233.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530163328/log.43401121._001233.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 08:07:06] 2025-02-25 13:06:46,338 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530163328/log.43401121._001233.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401121._001233.job
[2025-02-25 08:07:06] 2025-02-25 13:06:46,358 | INFO     | adding to output.list: log.43401121._001233.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/ee/log.43401121._001233.job.log.tg
[2025-02-25 08:07:06] 2025-02-25 13:06:46,358 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 08:07:06] 2025-02-25 13:06:46,358 | INFO     | summary of transferred files:
[2025-02-25 08:07:06] 2025-02-25 13:06:46,359 | INFO     |  -- lfn=log.43401121._001233.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 08:07:06] 2025-02-25 13:06:46,359 | INFO     | stage-out finished correctly
[2025-02-25 08:07:06] 2025-02-25 13:06:46,443 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 08:07:06] 2025-02-25 13:06:47,852 | INFO     | job 6530163328 has state=finished
[2025-02-25 08:07:06] 2025-02-25 13:06:47,852 | INFO     | preparing for final server update for job 6530163328 in state='finished'
[2025-02-25 08:07:06] 2025-02-25 13:06:47,852 | INFO     | this job has now completed (state=finished)
[2025-02-25 08:07:06] 2025-02-25 13:06:47,853 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 08:07:06] 2025-02-25 13:06:47,853 | INFO     | log transfer has been attempted: DONE
[2025-02-25 08:07:06] 2025-02-25 13:06:47,853 | INFO     | job 6530163328 has finished - writing final server update
[2025-02-25 08:07:06] 2025-02-25 13:06:47,853 | INFO     | total number of processed events: 400 (read)
[2025-02-25 08:07:06] 2025-02-25 13:06:47,855 | INFO     | executing command: lscpu
[2025-02-25 08:07:06] 2025-02-25 13:06:47,887 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 08:07:06] 2025-02-25 13:06:47,901 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 08:07:06] 2025-02-25 13:06:52,863 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 08:07:06] 2025-02-25 13:06:52,864 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530163328/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 08:07:06] 2025-02-25 13:06:52,869 | INFO     | extracted standard info from prmon json
[2025-02-25 08:07:06] 2025-02-25 13:06:52,870 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 08:07:06] 2025-02-25 13:06:52,870 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 08:07:06] 2025-02-25 13:06:52,871 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 08:07:06] 2025-02-25 13:06:52,871 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 08:07:06] 2025-02-25 13:06:52,873 | INFO     | fitting pss+swap vs Time
[2025-02-25 08:07:06] 2025-02-25 13:06:52,873 | INFO     | model: linear, x: [1740484120.0, 1740484181.0, 1740484242.0, 1740484303.0, 1740484364.0, 1740484425.0, 1740484486.0, 1740484547.0, 1740484608.0, 1740484669.0, 1740
[2025-02-25 08:07:06] 2025-02-25 13:06:52,874 | INFO     | sum of square deviations: 130793150.0
[2025-02-25 08:07:06] 2025-02-25 13:06:52,874 | INFO     | sum of deviations: 22414741092.0
[2025-02-25 08:07:06] 2025-02-25 13:06:52,874 | INFO     | mean x: 1740486377.0
[2025-02-25 08:07:06] 2025-02-25 13:06:52,874 | INFO     | mean y: 2566987.12
[2025-02-25 08:07:06] 2025-02-25 13:06:52,874 | INFO     | -- intersect: -298274150980.20557
[2025-02-25 08:07:06] 2025-02-25 13:06:52,875 | INFO     | intersect: -298274150980.20557
[2025-02-25 08:07:06] 2025-02-25 13:06:52,875 | INFO     | chi2: 1.9240553607089623
[2025-02-25 08:07:06] 2025-02-25 13:06:52,875 | INFO     | -- intersect: -298274150980.20557
[2025-02-25 08:07:06] 2025-02-25 13:06:52,875 | INFO     | current memory leak: 171.38 B/s (using 75 data points, chi2=1.92)
[2025-02-25 08:07:06] 2025-02-25 13:06:52,876 | INFO     | ..............................
[2025-02-25 08:07:06] 2025-02-25 13:06:52,876 | INFO     | . Timing measurements:
[2025-02-25 08:07:06] 2025-02-25 13:06:52,876 | INFO     | . get job = 0 s
[2025-02-25 08:07:06] 2025-02-25 13:06:52,876 | INFO     | . initial setup = 2 s
[2025-02-25 08:07:06] 2025-02-25 13:06:52,876 | INFO     | . payload setup = 7 s
[2025-02-25 08:07:06] 2025-02-25 13:06:52,876 | INFO     | . stage-in = 0 s
[2025-02-25 08:07:06] 2025-02-25 13:06:52,876 | INFO     | . payload execution = 4991 s
[2025-02-25 08:07:06] 2025-02-25 13:06:52,876 | INFO     | . stage-out = 0 s
[2025-02-25 08:07:06] 2025-02-25 13:06:52,877 | INFO     | . log creation = 0 s
[2025-02-25 08:07:06] 2025-02-25 13:06:52,877 | INFO     | ..............................
[2025-02-25 08:07:06] 2025-02-25 13:06:52,962 | WARNING  | process 24363 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 08:07:06] 2025-02-25 13:06:52,962 | INFO     | 
[2025-02-25 08:07:06] 2025-02-25 13:06:52,962 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530163328/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 08:07:06] 2025-02-25 13:06:52,962 | INFO     | job summary report
[2025-02-25 08:07:06] 2025-02-25 13:06:52,963 | INFO     | --------------------------------------------------
[2025-02-25 08:07:06] 2025-02-25 13:06:52,966 | INFO     | PanDA job id: 6530163328
[2025-02-25 08:07:06] 2025-02-25 13:06:52,966 | INFO     | task id: 43401121
[2025-02-25 08:07:06] 2025-02-25 13:06:52,967 | INFO     | errors: (none)
[2025-02-25 08:07:06] 2025-02-25 13:06:52,967 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 08:07:06] 2025-02-25 13:06:52,967 | INFO     | pilot state: finished 
[2025-02-25 08:07:06] 2025-02-25 13:06:52,967 | INFO     | transexitcode: 0
[2025-02-25 08:07:06] 2025-02-25 13:06:52,967 | INFO     | exeerrorcode: 0
[2025-02-25 08:07:06] 2025-02-25 13:06:52,967 | INFO     | exeerrordiag: 
[2025-02-25 08:07:06] 2025-02-25 13:06:52,968 | INFO     | exitcode: 0
[2025-02-25 08:07:06] 2025-02-25 13:06:52,968 | INFO     | exitmsg: OK
[2025-02-25 08:07:06] 2025-02-25 13:06:52,968 | INFO     | cpuconsumptiontime: 47438 s
[2025-02-25 08:07:06] 2025-02-25 13:06:52,968 | INFO     | nevents: 400
[2025-02-25 08:07:06] 2025-02-25 13:06:52,968 | INFO     | neventsw: 0
[2025-02-25 08:07:06] 2025-02-25 13:06:52,968 | INFO     | pid: 24363
[2025-02-25 08:07:06] 2025-02-25 13:06:52,969 | INFO     | pgrp: 24363
[2025-02-25 08:07:06] 2025-02-25 13:06:52,969 | INFO     | corecount: 12
[2025-02-25 08:07:06] 2025-02-25 13:06:52,969 | INFO     | event service: False
[2025-02-25 08:07:06] 2025-02-25 13:06:52,969 | INFO     | sizes: {0: 2383364, 5: 2383570, 11: 2383626, 5003: 2409736, 5005: 2418733, 5011: 2418847}
[2025-02-25 08:07:06] 2025-02-25 13:06:52,969 | INFO     | --------------------------------------------------
[2025-02-25 08:07:06] 2025-02-25 13:06:52,969 | INFO     | 
[2025-02-25 08:07:06] 2025-02-25 13:06:52,970 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 08:07:06] 2025-02-25 13:06:52,993 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 08:07:06] 2025-02-25 13:06:52,993 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 08:07:06] 2025-02-25 13:06:52,993 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 08:07:06] 2025-02-25 13:06:52,993 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 08:07:06] 2025-02-25 13:06:52,993 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 08:07:06] 2025-02-25 13:06:52,994 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 08:07:06] 2025-02-25 13:06:52,994 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 08:07:06] 2025-02-25 13:06:52,994 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 08:07:06] 2025-02-25 13:06:52,994 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 08:07:06] 2025-02-25 13:06:52,994 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 08:07:06] 2025-02-25 13:06:52,994 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 08:07:06] 2025-02-25 13:06:52,995 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 08:07:06] 2025-02-25 13:06:52,995 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 08:07:06] 2025-02-25 13:06:52,995 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 08:07:06] 2025-02-25 13:06:52,995 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 08:07:06] 2025-02-25 13:06:52,995 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 08:07:06] 2025-02-25 13:06:52,995 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 08:07:06] 2025-02-25 13:06:52,996 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 08:07:06] 2025-02-25 13:06:52,996 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 08:07:06] 2025-02-25 13:06:52,996 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 08:07:06] 2025-02-25 13:06:52,996 | INFO     | job 6530163328 has completed (purged errors)
[2025-02-25 08:07:06] 2025-02-25 13:06:52,996 | INFO     | overall cleanup function is called
[2025-02-25 08:07:06] 2025-02-25 13:06:53,027 | INFO     | number of running child processes to parent process 24363: 1
[2025-02-25 08:07:06] 2025-02-25 13:06:53,028 | INFO     | maximum number of monitored processes: 6
[2025-02-25 08:07:06] 2025-02-25 13:06:53,028 | INFO     | aborting job monitoring since job object (job id=6530163328) has expired
[2025-02-25 08:07:06] 2025-02-25 13:06:54,004 | INFO     | --- collectZombieJob: --- 10, [24363]
[2025-02-25 08:07:06] 2025-02-25 13:06:54,005 | INFO     | zombie collector waiting for pid 24363
[2025-02-25 08:07:06] 2025-02-25 13:06:54,005 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 08:07:06] 2025-02-25 13:06:54,005 | INFO     | collected zombie processes
[2025-02-25 08:07:06] 2025-02-25 13:06:54,005 | INFO     | will attempt to kill all subprocesses of pid=24363
[2025-02-25 08:07:06] 2025-02-25 13:06:54,069 | INFO     | process IDs to be killed: [24363] (in reverse order)
[2025-02-25 08:07:06] 2025-02-25 13:06:54,120 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 08:07:06] 2025-02-25 13:06:54,120 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 08:07:06] 2025-02-25 13:06:54,124 | INFO     | did not find any defunct processes belonging to 24363
[2025-02-25 08:07:06] 2025-02-25 13:06:54,127 | INFO     | did not find any defunct processes belonging to 24363
[2025-02-25 08:07:06] 2025-02-25 13:06:54,128 | INFO     | ready for new job
[2025-02-25 08:07:06] 2025-02-25 13:06:54,128 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 08:07:06] 2025-02-25 13:06:54,129 | INFO     | **************************************
[2025-02-25 08:07:06] 2025-02-25 13:06:54,130 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 08:07:06] 2025-02-25 13:06:54,130 | INFO     | **************************************
[2025-02-25 08:07:06] 2025-02-25 13:06:54,130 | INFO     | 
[2025-02-25 08:07:06] 2025-02-25 13:06:54,130 | INFO     | architecture information:
[2025-02-25 08:07:06] 2025-02-25 13:06:54,131 | INFO     | executing command: cat /etc/os-release
[2025-02-25 08:07:06] 2025-02-25 13:06:54,145 | INFO     | cat /etc/os-release:
[2025-02-25 08:07:06] NAME="CentOS Linux"
[2025-02-25 08:07:06] VERSION="7 (Core)"
[2025-02-25 08:07:06] ID="centos"
[2025-02-25 08:07:06] ID_LIKE="rhel fedora"
[2025-02-25 08:07:06] VERSION_ID="7"
[2025-02-25 08:07:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 08:07:06] ANSI_COLOR="0;31"
[2025-02-25 08:07:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 08:07:06] HOME_URL="https://www.centos.org/"
[2025-02-25 08:07:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 08:07:06] 
[2025-02-25 08:07:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 08:07:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 08:07:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 08:07:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 08:07:06] 
[2025-02-25 08:07:06] 2025-02-25 13:06:54,145 | INFO     | **************************************
[2025-02-25 08:07:06] 2025-02-25 13:06:54,648 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 08:07:06] 2025-02-25 13:06:54,664 | INFO     | sufficient remaining disk space (29375856640 B)
[2025-02-25 08:07:06] 2025-02-25 13:06:54,664 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 08:07:06] 2025-02-25 13:06:54,665 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 08:07:06] 2025-02-25 13:06:54,665 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 08:07:06] 2025-02-25 13:06:54,665 | INFO     | aborting loop
[2025-02-25 08:07:06] 2025-02-25 13:06:54,665 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 08:07:06] 2025-02-25 13:06:54,666 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 08:07:06] 2025-02-25 13:06:54,666 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 08:07:06] 2025-02-25 13:06:54,666 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 08:07:06] 2025-02-25 13:06:54,667 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 08:07:06] 2025-02-25 13:06:54,667 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 08:07:06] 2025-02-25 13:06:54,918 | INFO     | all payload control threads have been joined
[2025-02-25 08:07:06] 2025-02-25 13:06:55,326 | INFO     | all data control threads have been joined
[2025-02-25 08:07:06] 2025-02-25 13:06:55,670 | INFO     | [job] job monitor thread has finished
[2025-02-25 08:07:06] 2025-02-25 13:06:55,670 | INFO     | [job] retrieve thread has finished
[2025-02-25 08:07:06] 2025-02-25 13:06:55,672 | INFO     | [job] queue monitor thread has finished
[2025-02-25 08:07:06] 2025-02-25 13:06:55,744 | INFO     | all job control threads have been joined
[2025-02-25 08:07:06] 2025-02-25 13:06:55,850 | INFO     | [data] copytool_in thread has finished
[2025-02-25 08:07:06] 2025-02-25 13:06:55,924 | INFO     | [payload] control thread has finished
[2025-02-25 08:07:06] 2025-02-25 13:06:55,988 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 08:07:06] 2025-02-25 13:06:56,014 | INFO     | [payload] failed_post thread has finished
[2025-02-25 08:07:06] 2025-02-25 13:06:56,332 | INFO     | [data] control thread has finished
[2025-02-25 08:07:06] 2025-02-25 13:06:56,569 | INFO     | [job] validate thread has finished
[2025-02-25 08:07:06] 2025-02-25 13:06:56,670 | INFO     | [data] copytool_out thread has finished
[2025-02-25 08:07:06] 2025-02-25 13:06:56,749 | INFO     | [job] control thread has finished
[2025-02-25 08:07:06] 2025-02-25 13:06:56,763 | INFO     | [payload] validate_post thread has finished
[2025-02-25 08:07:06] 2025-02-25 13:06:56,798 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 08:07:06] 2025-02-25 13:06:56,806 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 08:07:06] 2025-02-25 13:06:56,853 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 08:07:06] 2025-02-25 13:06:57,031 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 08:07:06] 2025-02-25 13:07:01,037 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 08:07:06] 2025-02-25 13:07:01,303 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139706529552192)>', '<ExcThread(monitor, started 139705203021568)>']
[2025-02-25 08:07:06] 2025-02-25 13:07:01,703 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 08:07:06] 2025-02-25 13:07:01,703 | INFO     | [monitor] control thread has ended
[2025-02-25 08:07:06] 2025-02-25 13:07:06,328 | INFO     | all workflow threads have been joined
[2025-02-25 08:07:06] 2025-02-25 13:07:06,427 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 08:07:06] 2025-02-25 13:07:06,427 | INFO     | traces error code: 0
[2025-02-25 08:07:06] 2025-02-25 13:07:06,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 08:07:06] 2025-02-25 13:07:06,516 [wrapper] ==== pilot stdout END ====
[2025-02-25 08:07:06] 2025-02-25 13:07:06,520 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 08:07:06] 2025-02-25 13:07:06,525 [wrapper] pilotpid: 17996
[2025-02-25 08:07:06] 2025-02-25 13:07:06,528 [wrapper] Pilot exit status: 0
[2025-02-25 08:07:06] 2025-02-25 13:07:06,543 [wrapper] pandaids: 6530163328
[2025-02-25 08:07:06] 2025-02-25 13:07:06,579 [wrapper] cleanup supervisor_pilot  6993 17997
[2025-02-25 08:07:06] 2025-02-25 13:07:06,583 [wrapper] Test setup, not cleaning
[2025-02-25 08:07:06] 2025-02-25 13:07:06,590 [wrapper] apfmon messages muted
[2025-02-25 08:07:06] 2025-02-25 13:07:06,594 [wrapper] ==== wrapper stdout END ====
[2025-02-25 08:07:06] 2025-02-25 13:07:06,598 [wrapper] ==== wrapper stderr END ====
[2025-02-25 08:07:06]  *** Error codes and diagnostics ***
[2025-02-25 08:07:06]     "exeErrorCode": 0,
[2025-02-25 08:07:06]     "exeErrorDiag": "",
[2025-02-25 08:07:06]     "pilotErrorCode": 0,
[2025-02-25 08:07:06]     "pilotErrorDiag": "",
[2025-02-25 08:07:06]  *** Listing of results directory ***
[2025-02-25 08:07:06] total 424252
[2025-02-25 08:07:06] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 06:17 pilot3.tar.gz
[2025-02-25 08:07:06] -rwx------ 1 boincer umatlas     35865 Feb 25 06:42 runpilot2-wrapper.sh
[2025-02-25 08:07:06] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 06:42 queuedata.json
[2025-02-25 08:07:06] -rw-r--r-- 1 boincer umatlas       100 Feb 25 06:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 08:07:06] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 06:42 run_atlas
[2025-02-25 08:07:06] -rw-r--r-- 1 boincer umatlas       105 Feb 25 06:42 job.xml
[2025-02-25 08:07:06] -rw-r--r-- 2 boincer umatlas 247159395 Feb 25 06:42 EVNT.43401119._000052.pool.root.1
[2025-02-25 08:07:06] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 06:42 start_atlas.sh
[2025-02-25 08:07:06] drwxrwx--x 2 boincer umatlas      4096 Feb 25 06:42 shared
[2025-02-25 08:07:06] -rw-r--r-- 2 boincer umatlas    503546 Feb 25 06:42 input.tar.gz
[2025-02-25 08:07:06] -rw-r--r-- 1 boincer umatlas         0 Feb 25 06:42 boinc_lockfile
[2025-02-25 08:07:06] -rw-r--r-- 1 boincer umatlas      2549 Feb 25 06:42 pandaJob.out
[2025-02-25 08:07:06] -rw------- 1 boincer umatlas       424 Feb 25 06:42 setup.sh.local
[2025-02-25 08:07:06] -rw------- 1 boincer umatlas    989526 Feb 25 06:43 agis_schedconf.cvmfs.json
[2025-02-25 08:07:06] -rw------- 1 boincer umatlas   1582519 Feb 25 06:43 agis_ddmendpoints.agis.ALL.json
[2025-02-25 08:07:06] drwx------ 4 boincer umatlas      4096 Feb 25 06:43 pilot3
[2025-02-25 08:07:06] -rw-r--r-- 1 boincer umatlas      5866 Feb 25 08:01 init_data.xml
[2025-02-25 08:07:06] -rw------- 1 boincer umatlas        95 Feb 25 08:06 pilot_heartbeat.json
[2025-02-25 08:07:06] -rw------- 1 boincer umatlas 181810793 Feb 25 08:06 HITS.43401121._001233.pool.root.1
[2025-02-25 08:07:06] -rw-r--r-- 1 boincer umatlas       529 Feb 25 08:06 boinc_task_state.xml
[2025-02-25 08:07:06] -rw------- 1 boincer umatlas      1043 Feb 25 08:06 memory_monitor_summary.json
[2025-02-25 08:07:06] -rw------- 1 boincer umatlas    360142 Feb 25 08:06 log.43401121._001233.job.log.tgz.1
[2025-02-25 08:07:06] -rw------- 1 boincer umatlas      7756 Feb 25 08:06 heartbeat.json
[2025-02-25 08:07:06] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 08:07 boinc_mmap_file
[2025-02-25 08:07:06] -rw-r--r-- 1 boincer umatlas        27 Feb 25 08:07 wrapper_checkpoint.txt
[2025-02-25 08:07:06] -rw------- 1 boincer umatlas      4338 Feb 25 08:07 pilotlog.txt
[2025-02-25 08:07:06] -rw------- 1 boincer umatlas    470272 Feb 25 08:07 log.43401121._001233.job.log.1
[2025-02-25 08:07:06] -rw------- 1 boincer umatlas       357 Feb 25 08:07 output.list
[2025-02-25 08:07:06] -rw-r--r-- 1 boincer umatlas       620 Feb 25 08:07 runtime_log
[2025-02-25 08:07:06] -rw------- 1 boincer umatlas    849920 Feb 25 08:07 result.tar.gz
[2025-02-25 08:07:06] -rw-r--r-- 1 boincer umatlas     11010 Feb 25 08:07 runtime_log.err
[2025-02-25 08:07:06] -rw------- 1 boincer umatlas       657 Feb 25 08:07 AORLDmFV866nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmaGwKDmdsom5n.diag
[2025-02-25 08:07:06] -rw-r--r-- 1 boincer umatlas     21344 Feb 25 08:07 stderr.txt
[2025-02-25 08:07:06] HITS file was successfully produced:
[2025-02-25 08:07:06] -rw------- 1 boincer umatlas 181810793 Feb 25 08:06 shared/HITS.pool.root.1
[2025-02-25 08:07:06]  *** Contents of shared directory: ***
[2025-02-25 08:07:06] total 420268
[2025-02-25 08:07:06] -rw-r--r-- 2 boincer umatlas 247159395 Feb 25 06:42 ATLAS.root_0
[2025-02-25 08:07:06] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 06:42 start_atlas.sh
[2025-02-25 08:07:06] -rw-r--r-- 2 boincer umatlas    503546 Feb 25 06:42 input.tar.gz
[2025-02-25 08:07:06] -rw------- 1 boincer umatlas 181810793 Feb 25 08:06 HITS.pool.root.1
[2025-02-25 08:07:06] -rw------- 1 boincer umatlas    849920 Feb 25 08:07 result.tar.gz
08:07:08 (14337): run_atlas exited; CPU time 47372.132462
08:07:08 (14337): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN