Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:42:45 (3448285): wrapper (7.7.26015): starting
06:42:45 (3448285): wrapper: running run_atlas (--nthreads 4)
[2025-02-27 06:42:45] Arguments: --nthreads 4
[2025-02-27 06:42:45] Threads: 4
[2025-02-27 06:42:45] Checking for CVMFS
[2025-02-27 06:42:45] No cvmfs_config command found, will try listing directly
[2025-02-27 06:42:45] CVMFS is ok
[2025-02-27 06:42:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-27 06:42:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-27 06:42:45] Further information can be found at the LHC@home message board.
[2025-02-27 06:42:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-27 06:42:45] Checking for apptainer binary...
[2025-02-27 06:42:45] which: no apptainer in ((null))
[2025-02-27 06:42:45] apptainer is not installed, using version from CVMFS
[2025-02-27 06:42:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-27 06:42:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot68/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-02-27 06:42:46] apptainer works
[2025-02-27 06:42:46] Set ATHENA_PROC_NUMBER=4
[2025-02-27 06:42:46] Set ATHENA_CORE_NUMBER=4
[2025-02-27 06:42:46] Starting ATLAS job with PandaID=6530092130
[2025-02-27 06:42:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot68/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-27 08:53:35]  *** The last 200 lines of the pilot log: ***
[2025-02-27 08:53:35] 2025-02-27 07:53:13,553 | INFO     | sum of square deviations: 650252192.0
[2025-02-27 08:53:35] 2025-02-27 07:53:13,553 | INFO     | sum of deviations: 39129541503.5
[2025-02-27 08:53:35] 2025-02-27 07:53:13,554 | INFO     | mean x: 1740638883.5
[2025-02-27 08:53:35] 2025-02-27 07:53:13,554 | INFO     | mean y: 2224401.6015625
[2025-02-27 08:53:35] 2025-02-27 07:53:13,554 | INFO     | -- intersect: -104742368961.52109
[2025-02-27 08:53:35] 2025-02-27 07:53:13,554 | INFO     | intersect: -104742368961.52109
[2025-02-27 08:53:35] 2025-02-27 07:53:13,554 | INFO     | chi2: 4.566809118133226
[2025-02-27 08:53:35] 2025-02-27 07:53:13,554 | INFO     | model: linear, x: [1740635010.0, 1740635071.0, 1740635132.0, 1740635193.0, 1740635254.0, 1740635315.0, 1740635376.0, 1740635437.0, 1740635498.0, 1740635559.0, 1740
[2025-02-27 08:53:35] 2025-02-27 07:53:13,554 | INFO     | sum of square deviations: 576985702.0
[2025-02-27 08:53:35] 2025-02-27 07:53:13,555 | INFO     | sum of deviations: 45566902705.0
[2025-02-27 08:53:35] 2025-02-27 07:53:13,555 | INFO     | mean x: 1740638731.0
[2025-02-27 08:53:35] 2025-02-27 07:53:13,555 | INFO     | mean y: 2237253.837398374
[2025-02-27 08:53:35] 2025-02-27 07:53:13,555 | INFO     | -- intersect: -137463068082.32785
[2025-02-27 08:53:35] 2025-02-27 07:53:13,555 | INFO     | intersect: -137463068082.32785
[2025-02-27 08:53:35] 2025-02-27 07:53:13,556 | INFO     | chi2: 3.7270566198777795
[2025-02-27 08:53:35] 2025-02-27 07:53:13,556 | INFO     | current chi2=3.7270566198777795 (change=18.388167241785485 %)
[2025-02-27 08:53:35] 2025-02-27 07:53:13,556 | INFO     | right removable region: 122
[2025-02-27 08:53:35] 2025-02-27 07:53:13,556 | INFO     | model: linear, x: [1740635315.0, 1740635376.0, 1740635437.0, 1740635498.0, 1740635559.0, 1740635620.0, 1740635681.0, 1740635742.0, 1740635803.0, 1740635864.0, 1740
[2025-02-27 08:53:35] 2025-02-27 07:53:13,556 | INFO     | sum of square deviations: 576985702.0
[2025-02-27 08:53:35] 2025-02-27 07:53:13,557 | INFO     | sum of deviations: 11890937705.000004
[2025-02-27 08:53:35] 2025-02-27 07:53:13,557 | INFO     | mean x: 1740639036.0
[2025-02-27 08:53:35] 2025-02-27 07:53:13,557 | INFO     | mean y: 2280794.0569105693
[2025-02-27 08:53:35] 2025-02-27 07:53:13,557 | INFO     | -- intersect: -35870064520.95275
[2025-02-27 08:53:35] 2025-02-27 07:53:13,557 | INFO     | intersect: -35870064520.95275
[2025-02-27 08:53:35] 2025-02-27 07:53:13,557 | INFO     | chi2: 2.254402406359291
[2025-02-27 08:53:35] 2025-02-27 07:53:13,558 | INFO     | current chi2=2.254402406359291 (change=50.635063825903394 %)
[2025-02-27 08:53:35] 2025-02-27 07:53:13,558 | INFO     | model: linear, x: [1740635620.0, 1740635681.0, 1740635742.0, 1740635803.0, 1740635864.0, 1740635925.0, 1740635986.0, 1740636047.0, 1740636108.0, 1740636169.0, 1740
[2025-02-27 08:53:35] 2025-02-27 07:53:13,558 | INFO     | sum of square deviations: 509440249.5
[2025-02-27 08:53:35] 2025-02-27 07:53:13,558 | INFO     | sum of deviations: -9316019460.5
[2025-02-27 08:53:35] 2025-02-27 07:53:13,559 | INFO     | mean x: 1740639188.5
[2025-02-27 08:53:35] 2025-02-27 07:53:13,559 | INFO     | mean y: 2328716.0423728814
[2025-02-27 08:53:35] 2025-02-27 07:53:13,559 | INFO     | -- intersect: 31833006739.01026
[2025-02-27 08:53:35] 2025-02-27 07:53:13,559 | INFO     | intersect: 31833006739.01026
[2025-02-27 08:53:35] 2025-02-27 07:53:13,559 | INFO     | chi2: 0.967385251831129
[2025-02-27 08:53:35] 2025-02-27 07:53:13,559 | INFO     | current chi2=0.967385251831129 (change=57.0890605376264 %)
[2025-02-27 08:53:35] 2025-02-27 07:53:13,559 | INFO     | model: linear, x: [1740635925.0, 1740635986.0, 1740636047.0, 1740636108.0, 1740636169.0, 1740636230.0, 1740636291.0, 1740636352.0, 1740636413.0, 1740636474.0, 1740
[2025-02-27 08:53:35] 2025-02-27 07:53:13,559 | INFO     | sum of square deviations: 447383272.0
[2025-02-27 08:53:35] 2025-02-27 07:53:13,560 | INFO     | sum of deviations: -11633581267.0
[2025-02-27 08:53:35] 2025-02-27 07:53:13,560 | INFO     | mean x: 1740639341.0
[2025-02-27 08:53:35] 2025-02-27 07:53:13,560 | INFO     | mean y: 2334204.610619469
[2025-02-27 08:53:35] 2025-02-27 07:53:13,560 | INFO     | -- intersect: 45265245219.44361
[2025-02-27 08:53:35] 2025-02-27 07:53:13,560 | INFO     | intersect: 45265245219.44361
[2025-02-27 08:53:35] 2025-02-27 07:53:13,561 | INFO     | chi2: 0.9041328236378952
[2025-02-27 08:53:35] 2025-02-27 07:53:13,561 | INFO     | current chi2=0.9041328236378952 (change=6.538494159747173 %)
[2025-02-27 08:53:35] 2025-02-27 07:53:13,561 | INFO     | left removable region: 30
[2025-02-27 08:53:35] 2025-02-27 07:53:13,561 | INFO     | model: linear, x: [1740636840.0, 1740636901.0, 1740636962.0, 1740637023.0, 1740637084.0, 1740637145.0, 1740637206.0, 1740637267.0, 1740637328.0, 1740637389.0, 1740
[2025-02-27 08:53:35] 2025-02-27 07:53:13,561 | INFO     | sum of square deviations: 241429643.0
[2025-02-27 08:53:35] 2025-02-27 07:53:13,561 | INFO     | sum of deviations: -732742156.4999998
[2025-02-27 08:53:35] 2025-02-27 07:53:13,562 | INFO     | mean x: 1740639615.5
[2025-02-27 08:53:35] 2025-02-27 07:53:13,562 | INFO     | mean y: 2343223.836956522
[2025-02-27 08:53:35] 2025-02-27 07:53:13,562 | INFO     | -- intersect: 5285207455.843465
[2025-02-27 08:53:35] 2025-02-27 07:53:13,562 | INFO     | intersect: 5285207455.843465
[2025-02-27 08:53:35] 2025-02-27 07:53:13,562 | INFO     | chi2: 0.007838143251071525
[2025-02-27 08:53:35] 2025-02-27 07:53:13,562 | INFO     | -- intersect: 5285207455.843465
[2025-02-27 08:53:35] 2025-02-27 07:53:13,562 | INFO     | current memory leak: -3.04 B/s (using 92 data points, chi2=0.01)
[2025-02-27 08:53:35] 2025-02-27 07:53:13,563 | INFO     | ..............................
[2025-02-27 08:53:35] 2025-02-27 07:53:13,563 | INFO     | . Timing measurements:
[2025-02-27 08:53:35] 2025-02-27 07:53:13,563 | INFO     | . get job = 0 s
[2025-02-27 08:53:35] 2025-02-27 07:53:13,563 | INFO     | . initial setup = 1 s
[2025-02-27 08:53:35] 2025-02-27 07:53:13,563 | INFO     | . payload setup = 8 s
[2025-02-27 08:53:35] 2025-02-27 07:53:13,563 | INFO     | . stage-in = 0 s
[2025-02-27 08:53:35] 2025-02-27 07:53:13,563 | INFO     | . payload execution = 7775 s
[2025-02-27 08:53:35] 2025-02-27 07:53:13,563 | INFO     | . stage-out = 0 s
[2025-02-27 08:53:35] 2025-02-27 07:53:13,563 | INFO     | . log creation = 0 s
[2025-02-27 08:53:35] 2025-02-27 07:53:13,563 | INFO     | ..............................
[2025-02-27 08:53:35] 2025-02-27 07:53:13,657 | INFO     | 
[2025-02-27 08:53:35] 2025-02-27 07:53:13,657 | INFO     | job summary report
[2025-02-27 08:53:35] 2025-02-27 07:53:13,657 | INFO     | --------------------------------------------------
[2025-02-27 08:53:35] 2025-02-27 07:53:13,657 | INFO     | PanDA job id: 6530092130
[2025-02-27 08:53:35] 2025-02-27 07:53:13,657 | INFO     | task id: 43401171
[2025-02-27 08:53:35] 2025-02-27 07:53:13,658 | INFO     | errors: (none)
[2025-02-27 08:53:35] 2025-02-27 07:53:13,658 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-27 08:53:35] 2025-02-27 07:53:13,658 | INFO     | pilot state: finished 
[2025-02-27 08:53:35] 2025-02-27 07:53:13,658 | INFO     | transexitcode: 0
[2025-02-27 08:53:35] 2025-02-27 07:53:13,658 | INFO     | exeerrorcode: 0
[2025-02-27 08:53:35] 2025-02-27 07:53:13,658 | INFO     | exeerrordiag: 
[2025-02-27 08:53:35] 2025-02-27 07:53:13,658 | INFO     | exitcode: 0
[2025-02-27 08:53:35] 2025-02-27 07:53:13,658 | INFO     | exitmsg: OK
[2025-02-27 08:53:35] 2025-02-27 07:53:13,658 | INFO     | cpuconsumptiontime: 27944 s
[2025-02-27 08:53:35] 2025-02-27 07:53:13,658 | INFO     | nevents: 400
[2025-02-27 08:53:35] 2025-02-27 07:53:13,658 | INFO     | neventsw: 0
[2025-02-27 08:53:35] 2025-02-27 07:53:13,659 | INFO     | pid: 3461201
[2025-02-27 08:53:35] 2025-02-27 07:53:13,659 | INFO     | pgrp: 3461201
[2025-02-27 08:53:35] 2025-02-27 07:53:13,659 | INFO     | corecount: 4
[2025-02-27 08:53:35] 2025-02-27 07:53:13,659 | INFO     | event service: False
[2025-02-27 08:53:35] 2025-02-27 07:53:13,659 | INFO     | sizes: {0: 2363651, 1: 2363850, 7: 2364056, 11: 2364084, 7787: 2391512, 7788: 2391511, 7789: 2400658, 7790: 2400714, 7798: 2400884}
[2025-02-27 08:53:35] 2025-02-27 07:53:13,659 | INFO     | --------------------------------------------------
[2025-02-27 08:53:35] 2025-02-27 07:53:13,659 | INFO     | 
[2025-02-27 08:53:35] 2025-02-27 07:53:13,659 | INFO     | executing command: ls -lF /scratch/boinc/var/slot68/slots/0
[2025-02-27 08:53:35] 2025-02-27 07:53:13,686 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-27 08:53:35] 2025-02-27 07:53:13,687 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-27 08:53:35] 2025-02-27 07:53:13,687 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-27 08:53:35] 2025-02-27 07:53:13,687 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-27 08:53:35] 2025-02-27 07:53:13,687 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-27 08:53:35] 2025-02-27 07:53:13,687 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-27 08:53:35] 2025-02-27 07:53:13,687 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-27 08:53:35] 2025-02-27 07:53:13,687 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-27 08:53:35] 2025-02-27 07:53:13,687 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-27 08:53:35] 2025-02-27 07:53:13,688 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-27 08:53:35] 2025-02-27 07:53:13,688 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-27 08:53:35] 2025-02-27 07:53:13,688 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-27 08:53:35] 2025-02-27 07:53:13,688 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-27 08:53:35] 2025-02-27 07:53:13,688 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-27 08:53:35] 2025-02-27 07:53:13,688 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-27 08:53:35] 2025-02-27 07:53:13,688 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-27 08:53:35] 2025-02-27 07:53:13,688 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-27 08:53:35] 2025-02-27 07:53:13,688 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-27 08:53:35] 2025-02-27 07:53:13,689 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-27 08:53:35] 2025-02-27 07:53:13,689 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-27 08:53:35] 2025-02-27 07:53:13,689 | INFO     | job 6530092130 has completed (purged errors)
[2025-02-27 08:53:35] 2025-02-27 07:53:13,689 | INFO     | overall cleanup function is called
[2025-02-27 08:53:35] 2025-02-27 07:53:14,698 | INFO     | --- collectZombieJob: --- 10, [3461201]
[2025-02-27 08:53:35] 2025-02-27 07:53:14,699 | INFO     | zombie collector waiting for pid 3461201
[2025-02-27 08:53:35] 2025-02-27 07:53:14,699 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-27 08:53:35] 2025-02-27 07:53:14,699 | INFO     | collected zombie processes
[2025-02-27 08:53:35] 2025-02-27 07:53:14,699 | INFO     | will attempt to kill all subprocesses of pid=3461201
[2025-02-27 08:53:35] 2025-02-27 07:53:14,744 | INFO     | 7818s have passed since pilot start
[2025-02-27 08:53:35] 2025-02-27 07:53:14,967 | INFO     | process IDs to be killed: [3461201] (in reverse order)
[2025-02-27 08:53:35] 2025-02-27 07:53:15,179 | WARNING  | found no corresponding commands to process id(s)
[2025-02-27 08:53:35] 2025-02-27 07:53:15,180 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-27 08:53:35] 2025-02-27 07:53:15,200 | INFO     | did not find any defunct processes belonging to 3461201
[2025-02-27 08:53:35] 2025-02-27 07:53:15,215 | INFO     | did not find any defunct processes belonging to 3461201
[2025-02-27 08:53:35] 2025-02-27 07:53:15,215 | INFO     | ready for new job
[2025-02-27 08:53:35] 2025-02-27 07:53:15,215 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-27 08:53:35] 2025-02-27 07:53:15,218 | INFO     | **************************************
[2025-02-27 08:53:35] 2025-02-27 07:53:15,220 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-27 08:53:35] 2025-02-27 07:53:15,221 | INFO     | **************************************
[2025-02-27 08:53:35] 2025-02-27 07:53:15,221 | INFO     | 
[2025-02-27 08:53:35] 2025-02-27 07:53:15,229 | INFO     | architecture information:
[2025-02-27 08:53:35] 2025-02-27 07:53:15,230 | INFO     | executing command: cat /etc/os-release
[2025-02-27 08:53:35] 2025-02-27 07:53:15,255 | INFO     | cat /etc/os-release:
[2025-02-27 08:53:35] NAME="CentOS Linux"
[2025-02-27 08:53:35] VERSION="7 (Core)"
[2025-02-27 08:53:35] ID="centos"
[2025-02-27 08:53:35] ID_LIKE="rhel fedora"
[2025-02-27 08:53:35] VERSION_ID="7"
[2025-02-27 08:53:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-27 08:53:35] ANSI_COLOR="0;31"
[2025-02-27 08:53:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-27 08:53:35] HOME_URL="https://www.centos.org/"
[2025-02-27 08:53:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-27 08:53:35] 
[2025-02-27 08:53:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-27 08:53:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-27 08:53:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-27 08:53:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-27 08:53:35] 
[2025-02-27 08:53:35] 2025-02-27 07:53:15,256 | INFO     | **************************************
[2025-02-27 08:53:35] 2025-02-27 07:53:15,759 | INFO     | executing command: df -mP /scratch/boinc/var/slot68/slots/0
[2025-02-27 08:53:35] 2025-02-27 07:53:15,784 | INFO     | sufficient remaining disk space (3357263527936 B)
[2025-02-27 08:53:35] 2025-02-27 07:53:15,784 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-27 08:53:35] 2025-02-27 07:53:15,784 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-27 08:53:35] 2025-02-27 07:53:15,785 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-27 08:53:35] 2025-02-27 07:53:15,785 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-27 08:53:35] 2025-02-27 07:53:15,786 | INFO     | found 0 job(s) in 20 queues
[2025-02-27 08:53:35] 2025-02-27 07:53:15,786 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-27 08:53:35] 2025-02-27 07:53:15,786 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-27 08:53:35] 2025-02-27 07:53:15,892 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-27 08:53:35] 2025-02-27 07:53:15,908 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-27 08:53:35] 2025-02-27 07:53:15,909 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-27 08:53:35] 2025-02-27 07:53:15,909 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-27 08:53:35] 2025-02-27 07:53:15,909 | INFO     | will abort loop
[2025-02-27 08:53:35] 2025-02-27 07:53:16,269 | INFO     | all data control threads have been joined
[2025-02-27 08:53:35] 2025-02-27 07:53:16,273 | INFO     | all job control threads have been joined
[2025-02-27 08:53:35] 2025-02-27 07:53:16,790 | INFO     | [job] retrieve thread has finished
[2025-02-27 08:53:35] 2025-02-27 07:53:16,810 | INFO     | [payload] validate_post thread has finished
[2025-02-27 08:53:35] 2025-02-27 07:53:16,837 | INFO     | [payload] failed_post thread has finished
[2025-02-27 08:53:35] 2025-02-27 07:53:16,856 | INFO     | all payload control threads have been joined
[2025-02-27 08:53:35] 2025-02-27 07:53:16,913 | INFO     | [job] job monitor thread has finished
[2025-02-27 08:53:35] 2025-02-27 07:53:17,168 | INFO     | [job] validate thread has finished
[2025-02-27 08:53:35] 2025-02-27 07:53:17,275 | INFO     | [data] control thread has finished
[2025-02-27 08:53:35] 2025-02-27 07:53:17,278 | INFO     | [job] control thread has finished
[2025-02-27 08:53:35] 2025-02-27 07:53:17,396 | INFO     | [job] create_data_payload thread has finished
[2025-02-27 08:53:35] 2025-02-27 07:53:17,399 | INFO     | [payload] execute_payloads thread has finished
[2025-02-27 08:53:35] 2025-02-27 07:53:17,681 | INFO     | [payload] validate_pre thread has finished
[2025-02-27 08:53:35] 2025-02-27 07:53:17,791 | INFO     | [data] copytool_out thread has finished
[2025-02-27 08:53:35] 2025-02-27 07:53:17,862 | INFO     | [payload] control thread has finished
[2025-02-27 08:53:35] 2025-02-27 07:53:17,930 | INFO     | [data] copytool_in thread has finished
[2025-02-27 08:53:35] 2025-02-27 07:53:18,667 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-27 08:53:35] 2025-02-27 07:53:19,673 | INFO     | [job] queue monitor thread has finished
[2025-02-27 08:53:35] 2025-02-27 07:53:19,898 | INFO     | [data] queue_monitor thread has finished
[2025-02-27 08:53:35] 2025-02-27 07:53:26,757 | INFO     | job.realtimelogging is not enabled
[2025-02-27 08:53:35] 2025-02-27 07:53:27,763 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-27 08:53:35] 2025-02-27 07:53:29,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23085068056384)>', '<ExcThread(monitor, started 23084761315072)>']
[2025-02-27 08:53:35] 2025-02-27 07:53:29,857 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-27 08:53:35] 2025-02-27 07:53:29,857 | INFO     | [monitor] control thread has ended
[2025-02-27 08:53:35] 2025-02-27 07:53:34,609 | INFO     | all workflow threads have been joined
[2025-02-27 08:53:35] 2025-02-27 07:53:34,609 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-27 08:53:35] 2025-02-27 07:53:34,610 | INFO     | traces error code: 0
[2025-02-27 08:53:35] 2025-02-27 07:53:34,610 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-27 08:53:35] 2025-02-27 07:53:34,782 [wrapper] ==== pilot stdout END ====
[2025-02-27 08:53:35] 2025-02-27 07:53:34,786 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-27 08:53:35] 2025-02-27 07:53:34,789 [wrapper] pilotpid: 3452263
[2025-02-27 08:53:35] 2025-02-27 07:53:34,793 [wrapper] Pilot exit status: 0
[2025-02-27 08:53:35] 2025-02-27 07:53:34,807 [wrapper] pandaids: 6530092130
[2025-02-27 08:53:35] 2025-02-27 07:53:34,929 [wrapper] cleanup supervisor_pilot 3911495 3452264
[2025-02-27 08:53:35] 2025-02-27 07:53:34,933 [wrapper] Test setup, not cleaning
[2025-02-27 08:53:35] 2025-02-27 07:53:34,941 [wrapper] apfmon messages muted
[2025-02-27 08:53:35] 2025-02-27 07:53:34,945 [wrapper] ==== wrapper stdout END ====
[2025-02-27 08:53:35] 2025-02-27 07:53:34,948 [wrapper] ==== wrapper stderr END ====
[2025-02-27 08:53:35]  *** Error codes and diagnostics ***
[2025-02-27 08:53:35]     "exeErrorCode": 0,
[2025-02-27 08:53:35]     "exeErrorDiag": "",
[2025-02-27 08:53:35]     "pilotErrorCode": 0,
[2025-02-27 08:53:35]     "pilotErrorDiag": "",
[2025-02-27 08:53:35]  *** Listing of results directory ***
[2025-02-27 08:53:35] total 426068
[2025-02-27 08:53:35] -rw-r--r-- 1 boinc boinc    491065 Feb 25 11:12 pilot3.tar.gz
[2025-02-27 08:53:35] -rw-r--r-- 1 boinc boinc      5118 Feb 25 11:33 queuedata.json
[2025-02-27 08:53:35] -rwx------ 1 boinc boinc     35865 Feb 25 11:35 runpilot2-wrapper.sh
[2025-02-27 08:53:35] -rw-r--r-- 1 boinc boinc       100 Feb 27 06:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-27 08:53:35] -rwxr-xr-x 1 boinc boinc      7986 Feb 27 06:42 run_atlas
[2025-02-27 08:53:35] -rw-r--r-- 1 boinc boinc       105 Feb 27 06:42 job.xml
[2025-02-27 08:53:35] -rw-r--r-- 2 boinc boinc 251442818 Feb 27 06:42 EVNT.43401169._000007.pool.root.1
[2025-02-27 08:53:35] -rw-r--r-- 1 boinc boinc      6675 Feb 27 06:42 init_data.xml
[2025-02-27 08:53:35] -rw-r--r-- 2 boinc boinc     17569 Feb 27 06:42 start_atlas.sh
[2025-02-27 08:53:35] drwxrwx--x 2 boinc boinc      4096 Feb 27 06:42 shared
[2025-02-27 08:53:35] -rw-r--r-- 2 boinc boinc    503557 Feb 27 06:42 input.tar.gz
[2025-02-27 08:53:35] -rw-r--r-- 1 boinc boinc         0 Feb 27 06:42 boinc_lockfile
[2025-02-27 08:53:35] -rw-r--r-- 1 boinc boinc      2540 Feb 27 06:42 pandaJob.out
[2025-02-27 08:53:35] -rw------- 1 boinc boinc       424 Feb 27 06:42 setup.sh.local
[2025-02-27 08:53:35] -rw------- 1 boinc boinc    989845 Feb 27 06:42 agis_schedconf.cvmfs.json
[2025-02-27 08:53:35] -rw------- 1 boinc boinc   1569202 Feb 27 06:42 agis_ddmendpoints.agis.ALL.json
[2025-02-27 08:53:35] drwx------ 4 boinc boinc      4096 Feb 27 06:42 pilot3
[2025-02-27 08:53:35] -rw------- 1 boinc boinc        95 Feb 27 08:52 pilot_heartbeat.json
[2025-02-27 08:53:35] -rw------- 1 boinc boinc 178959427 Feb 27 08:52 HITS.43401171._000156.pool.root.1
[2025-02-27 08:53:35] -rw-r--r-- 1 boinc boinc       529 Feb 27 08:52 boinc_task_state.xml
[2025-02-27 08:53:35] -rw------- 1 boinc boinc      1022 Feb 27 08:52 memory_monitor_summary.json
[2025-02-27 08:53:35] -rw------- 1 boinc boinc    267900 Feb 27 08:53 log.43401171._000156.job.log.tgz.1
[2025-02-27 08:53:35] -rw-r--r-- 1 boinc boinc      8192 Feb 27 08:53 boinc_mmap_file
[2025-02-27 08:53:35] -rw-r--r-- 1 boinc boinc        27 Feb 27 08:53 wrapper_checkpoint.txt
[2025-02-27 08:53:35] -rw------- 1 boinc boinc      7684 Feb 27 08:53 heartbeat.json
[2025-02-27 08:53:35] -rw------- 1 boinc boinc      4607 Feb 27 08:53 pilotlog.txt
[2025-02-27 08:53:35] -rw------- 1 boinc boinc    781908 Feb 27 08:53 log.43401171._000156.job.log.1
[2025-02-27 08:53:35] -rw------- 1 boinc boinc       357 Feb 27 08:53 output.list
[2025-02-27 08:53:35] -rw-r--r-- 1 boinc boinc       620 Feb 27 08:53 runtime_log
[2025-02-27 08:53:35] -rw------- 1 boinc boinc   1064960 Feb 27 08:53 result.tar.gz
[2025-02-27 08:53:35] -rw-r--r-- 1 boinc boinc     11423 Feb 27 08:53 runtime_log.err
[2025-02-27 08:53:35] -rw------- 1 boinc boinc       661 Feb 27 08:53 mZtNDm6S766nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmL9vKDmSg3vKm.diag
[2025-02-27 08:53:35] -rw-r--r-- 1 boinc boinc     21231 Feb 27 08:53 stderr.txt
[2025-02-27 08:53:35] HITS file was successfully produced:
[2025-02-27 08:53:35] -rw------- 1 boinc boinc 178959427 Feb 27 08:52 shared/HITS.pool.root.1
[2025-02-27 08:53:35]  *** Contents of shared directory: ***
[2025-02-27 08:53:35] total 421880
[2025-02-27 08:53:35] -rw-r--r-- 2 boinc boinc 251442818 Feb 27 06:42 ATLAS.root_0
[2025-02-27 08:53:35] -rw-r--r-- 2 boinc boinc     17569 Feb 27 06:42 start_atlas.sh
[2025-02-27 08:53:35] -rw-r--r-- 2 boinc boinc    503557 Feb 27 06:42 input.tar.gz
[2025-02-27 08:53:35] -rw------- 1 boinc boinc 178959427 Feb 27 08:52 HITS.pool.root.1
[2025-02-27 08:53:35] -rw------- 1 boinc boinc   1064960 Feb 27 08:53 result.tar.gz
08:53:36 (3448285): run_atlas exited; CPU time 27830.439369
08:53:36 (3448285): called boinc_finish(0)

</stderr_txt>
]]>

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