Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:20:00 (31661): wrapper (7.7.26015): starting
05:20:00 (31661): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 05:20:00] Arguments: --nthreads 12
[2025-02-25 05:20:00] Threads: 12
[2025-02-25 05:20:00] Checking for CVMFS
[2025-02-25 05:20:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 05:20:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 05:20:00] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 05:20:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 05:20:00] 2.11.2.0 32467 301208 149056 143035 2 1 18766092 20275201 1 130560 0 23374827 99.985 7508347 43734 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 05:20:00] CVMFS is ok
[2025-02-25 05:20:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 05:20:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 05:20:00] Further information can be found at the LHC@home message board.
[2025-02-25 05:20:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 05:20:00] Checking for apptainer binary...
[2025-02-25 05:20:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 05:20:00] Running /usr/bin/apptainer --version
[2025-02-25 05:20:00] apptainer version 1.3.2-1.el7
[2025-02-25 05:20:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 05:20:02] c-205-12.aglt2.org
[2025-02-25 05:20:02] apptainer works
[2025-02-25 05:20:02] Set ATHENA_PROC_NUMBER=12
[2025-02-25 05:20:02] Set ATHENA_CORE_NUMBER=12
[2025-02-25 05:20:02] Starting ATLAS job with PandaID=6530067137
[2025-02-25 05:20:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 06:41:49]  *** The last 200 lines of the pilot log: ***
[2025-02-25 06:41:49]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-25 06:41:49]  is_altstaged=None
[2025-02-25 06:41:49]  is_tar=False
[2025-02-25 06:41:49]  lfn=log.43401137._000119.job.log.tgz.1
[2025-02-25 06:41:49]  mtime=0
[2025-02-25 06:41:49]  protocol_id=None
[2025-02-25 06:41:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 06:41:49]  replicas=None
[2025-02-25 06:41:49]  scope=mc23_13p6TeV
[2025-02-25 06:41:49]  status=None
[2025-02-25 06:41:49]  status_code=0
[2025-02-25 06:41:49]  storage_token=
[2025-02-25 06:41:49]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530067137/log.43401137._000119.job.log.tgz.1
[2025-02-25 06:41:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/ba/log.43401137._000119.job.log.tgz.1
[2025-02-25 06:41:49]  workdir=None
[2025-02-25 06:41:49] ]
[2025-02-25 06:41:49] 2025-02-25 11:41:23,387 | INFO     | transferring file log.43401137._000119.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530067137/log.43401137._000119.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 06:41:49] 2025-02-25 11:41:23,387 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530067137/log.43401137._000119.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401137._000119.job
[2025-02-25 06:41:49] 2025-02-25 11:41:23,411 | INFO     | adding to output.list: log.43401137._000119.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/ba/log.43401137._000119.job.log.tg
[2025-02-25 06:41:49] 2025-02-25 11:41:23,411 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 06:41:49] 2025-02-25 11:41:23,412 | INFO     | summary of transferred files:
[2025-02-25 06:41:49] 2025-02-25 11:41:23,412 | INFO     |  -- lfn=log.43401137._000119.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 06:41:49] 2025-02-25 11:41:23,412 | INFO     | stage-out finished correctly
[2025-02-25 06:41:49] 2025-02-25 11:41:24,295 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 06:41:49] 2025-02-25 11:41:24,375 | INFO     | job 6530067137 has state=finished
[2025-02-25 06:41:49] 2025-02-25 11:41:24,376 | INFO     | preparing for final server update for job 6530067137 in state='finished'
[2025-02-25 06:41:49] 2025-02-25 11:41:24,444 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-02-25 06:41:49] 2025-02-25 11:41:24,444 | INFO     | this job has now completed (state=finished)
[2025-02-25 06:41:49] 2025-02-25 11:41:24,444 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 06:41:49] 2025-02-25 11:41:24,444 | INFO     | log transfer has been attempted: DONE
[2025-02-25 06:41:49] 2025-02-25 11:41:24,445 | INFO     | job 6530067137 has finished - writing final server update
[2025-02-25 06:41:49] 2025-02-25 11:41:24,445 | INFO     | total number of processed events: 400 (read)
[2025-02-25 06:41:49] 2025-02-25 11:41:24,447 | INFO     | executing command: lscpu
[2025-02-25 06:41:49] 2025-02-25 11:41:24,473 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 06:41:49] 2025-02-25 11:41:24,488 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 06:41:49] 2025-02-25 11:41:30,280 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 06:41:49] 2025-02-25 11:41:30,281 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530067137/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 06:41:49] 2025-02-25 11:41:30,286 | INFO     | extracted standard info from prmon json
[2025-02-25 06:41:49] 2025-02-25 11:41:30,287 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 06:41:49] 2025-02-25 11:41:30,287 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 06:41:49] 2025-02-25 11:41:30,288 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 06:41:49] 2025-02-25 11:41:30,288 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 06:41:49] 2025-02-25 11:41:30,291 | INFO     | fitting pss+swap vs Time
[2025-02-25 06:41:49] 2025-02-25 11:41:30,291 | INFO     | model: linear, x: [1740479152.0, 1740479213.0, 1740479274.0, 1740479335.0, 1740479396.0, 1740479457.0, 1740479518.0, 1740479579.0, 1740479640.0, 1740479701.0, 1740
[2025-02-25 06:41:49] 2025-02-25 11:41:30,291 | INFO     | sum of square deviations: 120605052.0
[2025-02-25 06:41:49] 2025-02-25 11:41:30,292 | INFO     | sum of deviations: 17544850439.000008
[2025-02-25 06:41:49] 2025-02-25 11:41:30,292 | INFO     | mean x: 1740481348.0
[2025-02-25 06:41:49] 2025-02-25 11:41:30,292 | INFO     | mean y: 2679236.2328767125
[2025-02-25 06:41:49] 2025-02-25 11:41:30,292 | INFO     | -- intersect: -253191398757.52414
[2025-02-25 06:41:49] 2025-02-25 11:41:30,292 | INFO     | intersect: -253191398757.52414
[2025-02-25 06:41:49] 2025-02-25 11:41:30,293 | INFO     | chi2: 2.457674429905
[2025-02-25 06:41:49] 2025-02-25 11:41:30,293 | INFO     | -- intersect: -253191398757.52414
[2025-02-25 06:41:49] 2025-02-25 11:41:30,293 | INFO     | current memory leak: 145.47 B/s (using 73 data points, chi2=2.46)
[2025-02-25 06:41:49] 2025-02-25 11:41:30,293 | INFO     | ..............................
[2025-02-25 06:41:49] 2025-02-25 11:41:30,293 | INFO     | . Timing measurements:
[2025-02-25 06:41:49] 2025-02-25 11:41:30,294 | INFO     | . get job = 0 s
[2025-02-25 06:41:49] 2025-02-25 11:41:30,294 | INFO     | . initial setup = 2 s
[2025-02-25 06:41:49] 2025-02-25 11:41:30,294 | INFO     | . payload setup = 7 s
[2025-02-25 06:41:49] 2025-02-25 11:41:30,294 | INFO     | . stage-in = 0 s
[2025-02-25 06:41:49] 2025-02-25 11:41:30,294 | INFO     | . payload execution = 4837 s
[2025-02-25 06:41:49] 2025-02-25 11:41:30,294 | INFO     | . stage-out = 0 s
[2025-02-25 06:41:49] 2025-02-25 11:41:30,294 | INFO     | . log creation = 0 s
[2025-02-25 06:41:49] 2025-02-25 11:41:30,294 | INFO     | ..............................
[2025-02-25 06:41:49] 2025-02-25 11:41:30,355 | WARNING  | process 11409 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 06:41:49] 2025-02-25 11:41:30,367 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530067137/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 06:41:49] 2025-02-25 11:41:30,382 | INFO     | 
[2025-02-25 06:41:49] 2025-02-25 11:41:30,382 | INFO     | job summary report
[2025-02-25 06:41:49] 2025-02-25 11:41:30,382 | INFO     | --------------------------------------------------
[2025-02-25 06:41:49] 2025-02-25 11:41:30,383 | INFO     | PanDA job id: 6530067137
[2025-02-25 06:41:49] 2025-02-25 11:41:30,384 | INFO     | task id: 43401137
[2025-02-25 06:41:49] 2025-02-25 11:41:30,384 | INFO     | errors: (none)
[2025-02-25 06:41:49] 2025-02-25 11:41:30,387 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 06:41:49] 2025-02-25 11:41:30,388 | INFO     | pilot state: finished 
[2025-02-25 06:41:49] 2025-02-25 11:41:30,388 | INFO     | transexitcode: 0
[2025-02-25 06:41:49] 2025-02-25 11:41:30,388 | INFO     | exeerrorcode: 0
[2025-02-25 06:41:49] 2025-02-25 11:41:30,388 | INFO     | exeerrordiag: 
[2025-02-25 06:41:49] 2025-02-25 11:41:30,388 | INFO     | exitcode: 0
[2025-02-25 06:41:49] 2025-02-25 11:41:30,389 | INFO     | exitmsg: OK
[2025-02-25 06:41:49] 2025-02-25 11:41:30,389 | INFO     | cpuconsumptiontime: 46491 s
[2025-02-25 06:41:49] 2025-02-25 11:41:30,389 | INFO     | nevents: 400
[2025-02-25 06:41:49] 2025-02-25 11:41:30,389 | INFO     | neventsw: 0
[2025-02-25 06:41:49] 2025-02-25 11:41:30,389 | INFO     | pid: 11409
[2025-02-25 06:41:49] 2025-02-25 11:41:30,389 | INFO     | pgrp: 11409
[2025-02-25 06:41:49] 2025-02-25 11:41:30,390 | INFO     | corecount: 12
[2025-02-25 06:41:49] 2025-02-25 11:41:30,390 | INFO     | event service: False
[2025-02-25 06:41:49] 2025-02-25 11:41:30,390 | INFO     | sizes: {0: 2383367, 5: 2383573, 11: 2383629, 4848: 2409681, 4850: 2418678, 4856: 2418792}
[2025-02-25 06:41:49] 2025-02-25 11:41:30,390 | INFO     | --------------------------------------------------
[2025-02-25 06:41:49] 2025-02-25 11:41:30,390 | INFO     | 
[2025-02-25 06:41:49] 2025-02-25 11:41:30,390 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 06:41:49] 2025-02-25 11:41:30,414 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 06:41:49] 2025-02-25 11:41:30,414 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 06:41:49] 2025-02-25 11:41:30,414 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 06:41:49] 2025-02-25 11:41:30,414 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 06:41:49] 2025-02-25 11:41:30,414 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 06:41:49] 2025-02-25 11:41:30,415 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 06:41:49] 2025-02-25 11:41:30,415 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 06:41:49] 2025-02-25 11:41:30,415 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 06:41:49] 2025-02-25 11:41:30,415 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 06:41:49] 2025-02-25 11:41:30,415 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 06:41:49] 2025-02-25 11:41:30,415 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 06:41:49] 2025-02-25 11:41:30,415 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 06:41:49] 2025-02-25 11:41:30,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 06:41:49] 2025-02-25 11:41:30,416 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 06:41:49] 2025-02-25 11:41:30,416 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 06:41:49] 2025-02-25 11:41:30,416 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 06:41:49] 2025-02-25 11:41:30,416 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 06:41:49] 2025-02-25 11:41:30,416 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 06:41:49] 2025-02-25 11:41:30,416 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 06:41:49] 2025-02-25 11:41:30,417 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 06:41:49] 2025-02-25 11:41:30,417 | INFO     | job 6530067137 has completed (purged errors)
[2025-02-25 06:41:49] 2025-02-25 11:41:30,417 | INFO     | overall cleanup function is called
[2025-02-25 06:41:49] 2025-02-25 11:41:30,447 | INFO     | number of running child processes to parent process 11409: 1
[2025-02-25 06:41:49] 2025-02-25 11:41:30,448 | INFO     | maximum number of monitored processes: 6
[2025-02-25 06:41:49] 2025-02-25 11:41:30,448 | INFO     | aborting job monitoring since job object (job id=6530067137) has expired
[2025-02-25 06:41:49] 2025-02-25 11:41:31,425 | INFO     | --- collectZombieJob: --- 10, [11409]
[2025-02-25 06:41:49] 2025-02-25 11:41:31,425 | INFO     | zombie collector waiting for pid 11409
[2025-02-25 06:41:49] 2025-02-25 11:41:31,425 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 06:41:49] 2025-02-25 11:41:31,426 | INFO     | collected zombie processes
[2025-02-25 06:41:49] 2025-02-25 11:41:31,426 | INFO     | will attempt to kill all subprocesses of pid=11409
[2025-02-25 06:41:49] 2025-02-25 11:41:31,491 | INFO     | process IDs to be killed: [11409] (in reverse order)
[2025-02-25 06:41:49] 2025-02-25 11:41:31,539 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 06:41:49] 2025-02-25 11:41:31,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 06:41:49] 2025-02-25 11:41:31,542 | INFO     | did not find any defunct processes belonging to 11409
[2025-02-25 06:41:49] 2025-02-25 11:41:31,545 | INFO     | did not find any defunct processes belonging to 11409
[2025-02-25 06:41:49] 2025-02-25 11:41:31,545 | INFO     | ready for new job
[2025-02-25 06:41:49] 2025-02-25 11:41:31,545 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 06:41:49] 2025-02-25 11:41:31,546 | INFO     | **************************************
[2025-02-25 06:41:49] 2025-02-25 11:41:31,546 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 06:41:49] 2025-02-25 11:41:31,546 | INFO     | **************************************
[2025-02-25 06:41:49] 2025-02-25 11:41:31,546 | INFO     | 
[2025-02-25 06:41:49] 2025-02-25 11:41:31,547 | INFO     | architecture information:
[2025-02-25 06:41:49] 2025-02-25 11:41:31,547 | INFO     | executing command: cat /etc/os-release
[2025-02-25 06:41:49] 2025-02-25 11:41:31,562 | INFO     | cat /etc/os-release:
[2025-02-25 06:41:49] NAME="CentOS Linux"
[2025-02-25 06:41:49] VERSION="7 (Core)"
[2025-02-25 06:41:49] ID="centos"
[2025-02-25 06:41:49] ID_LIKE="rhel fedora"
[2025-02-25 06:41:49] VERSION_ID="7"
[2025-02-25 06:41:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 06:41:49] ANSI_COLOR="0;31"
[2025-02-25 06:41:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 06:41:49] HOME_URL="https://www.centos.org/"
[2025-02-25 06:41:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 06:41:49] 
[2025-02-25 06:41:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 06:41:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 06:41:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 06:41:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 06:41:49] 
[2025-02-25 06:41:49] 2025-02-25 11:41:31,562 | INFO     | **************************************
[2025-02-25 06:41:49] 2025-02-25 11:41:32,065 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 06:41:49] 2025-02-25 11:41:32,082 | INFO     | sufficient remaining disk space (29369565184 B)
[2025-02-25 06:41:49] 2025-02-25 11:41:32,082 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 06:41:49] 2025-02-25 11:41:32,082 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 06:41:49] 2025-02-25 11:41:32,082 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 06:41:49] 2025-02-25 11:41:32,083 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 06:41:49] 2025-02-25 11:41:32,083 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 06:41:49] 2025-02-25 11:41:32,083 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 06:41:49] 2025-02-25 11:41:32,084 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 06:41:49] 2025-02-25 11:41:32,084 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 06:41:49] 2025-02-25 11:41:32,084 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 06:41:49] 2025-02-25 11:41:32,085 | INFO     | aborting loop
[2025-02-25 06:41:49] 2025-02-25 11:41:33,073 | INFO     | all data control threads have been joined
[2025-02-25 06:41:49] 2025-02-25 11:41:33,088 | INFO     | [job] retrieve thread has finished
[2025-02-25 06:41:49] 2025-02-25 11:41:33,090 | INFO     | [job] queue monitor thread has finished
[2025-02-25 06:41:49] 2025-02-25 11:41:33,090 | INFO     | [job] job monitor thread has finished
[2025-02-25 06:41:49] 2025-02-25 11:41:33,450 | INFO     | all job control threads have been joined
[2025-02-25 06:41:49] 2025-02-25 11:41:33,460 | INFO     | all payload control threads have been joined
[2025-02-25 06:41:49] 2025-02-25 11:41:33,689 | INFO     | [job] validate thread has finished
[2025-02-25 06:41:49] 2025-02-25 11:41:33,764 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 06:41:49] 2025-02-25 11:41:33,899 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 06:41:49] 2025-02-25 11:41:33,902 | INFO     | [payload] failed_post thread has finished
[2025-02-25 06:41:49] 2025-02-25 11:41:33,937 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 06:41:49] 2025-02-25 11:41:34,079 | INFO     | [data] control thread has finished
[2025-02-25 06:41:49] 2025-02-25 11:41:34,088 | INFO     | [data] copytool_out thread has finished
[2025-02-25 06:41:49] 2025-02-25 11:41:34,455 | INFO     | [job] control thread has finished
[2025-02-25 06:41:49] 2025-02-25 11:41:34,465 | INFO     | [payload] control thread has finished
[2025-02-25 06:41:49] 2025-02-25 11:41:34,524 | INFO     | [data] copytool_in thread has finished
[2025-02-25 06:41:49] 2025-02-25 11:41:34,579 | INFO     | [payload] validate_post thread has finished
[2025-02-25 06:41:49] 2025-02-25 11:41:34,886 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 06:41:49] 2025-02-25 11:41:38,892 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 06:41:49] 2025-02-25 11:41:42,887 | INFO     | job.realtimelogging is not enabled
[2025-02-25 06:41:49] 2025-02-25 11:41:43,888 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 06:41:49] 2025-02-25 11:41:44,635 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139787711432512)>', '<ExcThread(monitor, started 139787126159104)>']
[2025-02-25 06:41:49] 2025-02-25 11:41:45,148 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 06:41:49] 2025-02-25 11:41:45,148 | INFO     | [monitor] control thread has ended
[2025-02-25 06:41:49] 2025-02-25 11:41:49,660 | INFO     | all workflow threads have been joined
[2025-02-25 06:41:49] 2025-02-25 11:41:49,661 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 06:41:49] 2025-02-25 11:41:49,661 | INFO     | traces error code: 0
[2025-02-25 06:41:49] 2025-02-25 11:41:49,661 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 06:41:49] 2025-02-25 11:41:49,749 [wrapper] ==== pilot stdout END ====
[2025-02-25 06:41:49] 2025-02-25 11:41:49,753 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 06:41:49] 2025-02-25 11:41:49,757 [wrapper] pilotpid: 4289
[2025-02-25 06:41:49] 2025-02-25 11:41:49,760 [wrapper] Pilot exit status: 0
[2025-02-25 06:41:49] 2025-02-25 11:41:49,777 [wrapper] pandaids: 6530067137
[2025-02-25 06:41:49] 2025-02-25 11:41:49,814 [wrapper] cleanup supervisor_pilot   350 4290
[2025-02-25 06:41:49] 2025-02-25 11:41:49,818 [wrapper] Test setup, not cleaning
[2025-02-25 06:41:49] 2025-02-25 11:41:49,825 [wrapper] apfmon messages muted
[2025-02-25 06:41:49] 2025-02-25 11:41:49,829 [wrapper] ==== wrapper stdout END ====
[2025-02-25 06:41:49] 2025-02-25 11:41:49,833 [wrapper] ==== wrapper stderr END ====
[2025-02-25 06:41:49]  *** Error codes and diagnostics ***
[2025-02-25 06:41:49]     "exeErrorCode": 0,
[2025-02-25 06:41:49]     "exeErrorDiag": "",
[2025-02-25 06:41:49]     "pilotErrorCode": 0,
[2025-02-25 06:41:49]     "pilotErrorDiag": "",
[2025-02-25 06:41:49]  *** Listing of results directory ***
[2025-02-25 06:41:49] total 426112
[2025-02-25 06:41:49] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 05:12 pilot3.tar.gz
[2025-02-25 06:41:49] -rwx------ 1 boincer umatlas     35865 Feb 25 05:18 runpilot2-wrapper.sh
[2025-02-25 06:41:49] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 05:18 queuedata.json
[2025-02-25 06:41:49] -rw-r--r-- 1 boincer umatlas       100 Feb 25 05:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 06:41:49] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 05:19 run_atlas
[2025-02-25 06:41:49] -rw-r--r-- 1 boincer umatlas       105 Feb 25 05:19 job.xml
[2025-02-25 06:41:49] -rw-r--r-- 2 boincer umatlas 250191116 Feb 25 05:20 EVNT.43401135._000005.pool.root.1
[2025-02-25 06:41:49] -rw-r--r-- 2 boincer umatlas    503548 Feb 25 05:20 input.tar.gz
[2025-02-25 06:41:49] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 05:20 start_atlas.sh
[2025-02-25 06:41:49] drwxrwx--x 2 boincer umatlas      4096 Feb 25 05:20 shared
[2025-02-25 06:41:49] -rw-r--r-- 1 boincer umatlas         0 Feb 25 05:20 boinc_lockfile
[2025-02-25 06:41:49] -rw-r--r-- 1 boincer umatlas      2555 Feb 25 05:20 pandaJob.out
[2025-02-25 06:41:49] -rw------- 1 boincer umatlas       424 Feb 25 05:20 setup.sh.local
[2025-02-25 06:41:49] -rw------- 1 boincer umatlas    988817 Feb 25 05:20 agis_schedconf.cvmfs.json
[2025-02-25 06:41:49] -rw------- 1 boincer umatlas   1582519 Feb 25 05:20 agis_ddmendpoints.agis.ALL.json
[2025-02-25 06:41:49] drwx------ 4 boincer umatlas      4096 Feb 25 05:20 pilot3
[2025-02-25 06:41:49] -rw-r--r-- 1 boincer umatlas      5869 Feb 25 06:37 init_data.xml
[2025-02-25 06:41:49] -rw------- 1 boincer umatlas 180683907 Feb 25 06:40 HITS.43401137._000119.pool.root.1
[2025-02-25 06:41:49] -rw------- 1 boincer umatlas        95 Feb 25 06:41 pilot_heartbeat.json
[2025-02-25 06:41:49] -rw------- 1 boincer umatlas      1057 Feb 25 06:41 memory_monitor_summary.json
[2025-02-25 06:41:49] -rw-r--r-- 1 boincer umatlas       529 Feb 25 06:41 boinc_task_state.xml
[2025-02-25 06:41:49] -rw------- 1 boincer umatlas    371965 Feb 25 06:41 log.43401137._000119.job.log.tgz.1
[2025-02-25 06:41:49] -rw------- 1 boincer umatlas      7771 Feb 25 06:41 heartbeat.json
[2025-02-25 06:41:49] -rw------- 1 boincer umatlas      4410 Feb 25 06:41 pilotlog.txt
[2025-02-25 06:41:49] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 06:41 boinc_mmap_file
[2025-02-25 06:41:49] -rw-r--r-- 1 boincer umatlas        27 Feb 25 06:41 wrapper_checkpoint.txt
[2025-02-25 06:41:49] -rw------- 1 boincer umatlas    457485 Feb 25 06:41 log.43401137._000119.job.log.1
[2025-02-25 06:41:49] -rw------- 1 boincer umatlas       357 Feb 25 06:41 output.list
[2025-02-25 06:41:49] -rw-r--r-- 1 boincer umatlas       620 Feb 25 06:41 runtime_log
[2025-02-25 06:41:49] -rw------- 1 boincer umatlas    849920 Feb 25 06:41 result.tar.gz
[2025-02-25 06:41:49] -rw------- 1 boincer umatlas       658 Feb 25 06:41 vgGMDmIC766n9Rq4apOajLDm4fhM0noT9bVoFjIUDmcJfKDms07bQn.diag
[2025-02-25 06:41:49] -rw-r--r-- 1 boincer umatlas     11015 Feb 25 06:41 runtime_log.err
[2025-02-25 06:41:49] -rw-r--r-- 1 boincer umatlas     21465 Feb 25 06:41 stderr.txt
[2025-02-25 06:41:49] HITS file was successfully produced:
[2025-02-25 06:41:49] -rw------- 1 boincer umatlas 180683907 Feb 25 06:40 shared/HITS.pool.root.1
[2025-02-25 06:41:49]  *** Contents of shared directory: ***
[2025-02-25 06:41:49] total 422128
[2025-02-25 06:41:49] -rw-r--r-- 2 boincer umatlas 250191116 Feb 25 05:20 ATLAS.root_0
[2025-02-25 06:41:49] -rw-r--r-- 2 boincer umatlas    503548 Feb 25 05:20 input.tar.gz
[2025-02-25 06:41:49] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 05:20 start_atlas.sh
[2025-02-25 06:41:49] -rw------- 1 boincer umatlas 180683907 Feb 25 06:40 HITS.pool.root.1
[2025-02-25 06:41:49] -rw------- 1 boincer umatlas    849920 Feb 25 06:41 result.tar.gz
06:41:51 (31661): run_atlas exited; CPU time 46433.678921
06:41:51 (31661): called boinc_finish(0)

</stderr_txt>
]]>

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