Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:45:58 (26020): wrapper (7.7.26015): starting
03:45:58 (26020): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 03:45:58] Arguments: --nthreads 12
[2025-02-25 03:45:58] Threads: 12
[2025-02-25 03:45:58] Checking for CVMFS
[2025-02-25 03:45:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 03:45:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 03:45:58] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 03:45:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 03:45:58] 2.11.2.0 24956 293595 152792 143032 1 1 17851824 20275200 1 130560 0 23740649 99.979 7784360 44175 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 03:45:58] CVMFS is ok
[2025-02-25 03:45:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 03:45:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 03:45:58] Further information can be found at the LHC@home message board.
[2025-02-25 03:45:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 03:45:58] Checking for apptainer binary...
[2025-02-25 03:45:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 03:45:58] Running /usr/bin/apptainer --version
[2025-02-25 03:45:58] apptainer version 1.3.2-1.el7
[2025-02-25 03:45:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 03:46:00] c-205-8.aglt2.org
[2025-02-25 03:46:00] apptainer works
[2025-02-25 03:46:00] Set ATHENA_PROC_NUMBER=12
[2025-02-25 03:46:00] Set ATHENA_CORE_NUMBER=12
[2025-02-25 03:46:00] Starting ATLAS job with PandaID=6529925171
[2025-02-25 03:46:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 05:10:06]  *** The last 200 lines of the pilot log: ***
[2025-02-25 05:10:06]  is_tar=False
[2025-02-25 05:10:06]  lfn=log.43401121._000033.job.log.tgz.1
[2025-02-25 05:10:06]  mtime=0
[2025-02-25 05:10:06]  protocol_id=None
[2025-02-25 05:10:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 05:10:06]  replicas=None
[2025-02-25 05:10:06]  scope=mc23_13p6TeV
[2025-02-25 05:10:06]  status=None
[2025-02-25 05:10:06]  status_code=0
[2025-02-25 05:10:06]  storage_token=
[2025-02-25 05:10:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6529925171/log.43401121._000033.job.log.tgz.1
[2025-02-25 05:10:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/64/log.43401121._000033.job.log.tgz.1
[2025-02-25 05:10:06]  workdir=None
[2025-02-25 05:10:06] ]
[2025-02-25 05:10:06] 2025-02-25 10:09:37,287 | INFO     | transferring file log.43401121._000033.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6529925171/log.43401121._000033.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 05:10:06] 2025-02-25 10:09:37,288 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6529925171/log.43401121._000033.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401121._000033.job
[2025-02-25 05:10:06] 2025-02-25 10:09:37,307 | INFO     | monitor loop #367: job 0:6529925171 is in state 'stageout'
[2025-02-25 05:10:06] 2025-02-25 10:09:37,308 | WARNING  | aborting job monitor tasks since payload process 3827 is not running
[2025-02-25 05:10:06] 2025-02-25 10:09:37,309 | INFO     | adding to output.list: log.43401121._000033.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/64/log.43401121._000033.job.log.tg
[2025-02-25 05:10:06] 2025-02-25 10:09:37,310 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 05:10:06] 2025-02-25 10:09:37,310 | INFO     | summary of transferred files:
[2025-02-25 05:10:06] 2025-02-25 10:09:37,310 | INFO     |  -- lfn=log.43401121._000033.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 05:10:06] 2025-02-25 10:09:37,311 | INFO     | stage-out finished correctly
[2025-02-25 05:10:06] 2025-02-25 10:09:39,811 | INFO     | monitor loop #368: job 0:6529925171 is in state 'finished'
[2025-02-25 05:10:06] 2025-02-25 10:09:39,811 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 05:10:06] 2025-02-25 10:09:40,549 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 05:10:06] 2025-02-25 10:09:40,633 | INFO     | job 6529925171 has state=finished
[2025-02-25 05:10:06] 2025-02-25 10:09:40,633 | INFO     | preparing for final server update for job 6529925171 in state='finished'
[2025-02-25 05:10:06] 2025-02-25 10:09:40,634 | INFO     | this job has now completed (state=finished)
[2025-02-25 05:10:06] 2025-02-25 10:09:40,634 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 05:10:06] 2025-02-25 10:09:40,634 | INFO     | log transfer has been attempted: DONE
[2025-02-25 05:10:06] 2025-02-25 10:09:40,634 | INFO     | job 6529925171 has finished - writing final server update
[2025-02-25 05:10:06] 2025-02-25 10:09:40,635 | INFO     | total number of processed events: 400 (read)
[2025-02-25 05:10:06] 2025-02-25 10:09:40,636 | INFO     | executing command: lscpu
[2025-02-25 05:10:06] 2025-02-25 10:09:40,661 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 05:10:06] 2025-02-25 10:09:40,675 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 05:10:06] 2025-02-25 10:09:42,314 | INFO     | monitor loop #369: job 0:6529925171 is in state 'finished'
[2025-02-25 05:10:06] 2025-02-25 10:09:42,315 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 05:10:06] 2025-02-25 10:09:44,818 | INFO     | monitor loop #370: job 0:6529925171 is in state 'finished'
[2025-02-25 05:10:06] 2025-02-25 10:09:44,818 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 05:10:06] 2025-02-25 10:09:45,641 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 05:10:06] 2025-02-25 10:09:45,641 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6529925171/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 05:10:06] 2025-02-25 10:09:45,642 | INFO     | extracted standard info from prmon json
[2025-02-25 05:10:06] 2025-02-25 10:09:45,642 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 05:10:06] 2025-02-25 10:09:45,643 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 05:10:06] 2025-02-25 10:09:45,643 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 05:10:06] 2025-02-25 10:09:45,643 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 05:10:06] 2025-02-25 10:09:45,646 | INFO     | fitting pss+swap vs Time
[2025-02-25 05:10:06] 2025-02-25 10:09:45,646 | INFO     | model: linear, x: [1740473508.0, 1740473569.0, 1740473630.0, 1740473691.0, 1740473752.0, 1740473813.0, 1740473874.0, 1740473935.0, 1740473996.0, 1740474057.0, 1740
[2025-02-25 05:10:06] 2025-02-25 10:09:45,647 | INFO     | sum of square deviations: 130793150.0
[2025-02-25 05:10:06] 2025-02-25 10:09:45,647 | INFO     | sum of deviations: 20263770804.000004
[2025-02-25 05:10:06] 2025-02-25 10:09:45,647 | INFO     | mean x: 1740475765.0
[2025-02-25 05:10:06] 2025-02-25 10:09:45,648 | INFO     | mean y: 2588298.76
[2025-02-25 05:10:06] 2025-02-25 10:09:45,648 | INFO     | -- intersect: -269649163279.0296
[2025-02-25 05:10:06] 2025-02-25 10:09:45,648 | INFO     | intersect: -269649163279.0296
[2025-02-25 05:10:06] 2025-02-25 10:09:45,648 | INFO     | chi2: 2.1810389063658566
[2025-02-25 05:10:06] 2025-02-25 10:09:45,649 | INFO     | -- intersect: -269649163279.0296
[2025-02-25 05:10:06] 2025-02-25 10:09:45,649 | INFO     | current memory leak: 154.93 B/s (using 75 data points, chi2=2.18)
[2025-02-25 05:10:06] 2025-02-25 10:09:45,649 | INFO     | ..............................
[2025-02-25 05:10:06] 2025-02-25 10:09:45,649 | INFO     | . Timing measurements:
[2025-02-25 05:10:06] 2025-02-25 10:09:45,649 | INFO     | . get job = 0 s
[2025-02-25 05:10:06] 2025-02-25 10:09:45,649 | INFO     | . initial setup = 2 s
[2025-02-25 05:10:06] 2025-02-25 10:09:45,650 | INFO     | . payload setup = 7 s
[2025-02-25 05:10:06] 2025-02-25 10:09:45,650 | INFO     | . stage-in = 0 s
[2025-02-25 05:10:06] 2025-02-25 10:09:45,650 | INFO     | . payload execution = 4973 s
[2025-02-25 05:10:06] 2025-02-25 10:09:45,650 | INFO     | . stage-out = 0 s
[2025-02-25 05:10:06] 2025-02-25 10:09:45,650 | INFO     | . log creation = 0 s
[2025-02-25 05:10:06] 2025-02-25 10:09:45,650 | INFO     | ..............................
[2025-02-25 05:10:06] 2025-02-25 10:09:45,847 | INFO     | PID=29736 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-25 05:10:06] 2025-02-25 10:09:45,927 | INFO     | 
[2025-02-25 05:10:06] 2025-02-25 10:09:45,927 | INFO     | job summary report
[2025-02-25 05:10:06] 2025-02-25 10:09:45,927 | INFO     | --------------------------------------------------
[2025-02-25 05:10:06] 2025-02-25 10:09:45,927 | INFO     | PanDA job id: 6529925171
[2025-02-25 05:10:06] 2025-02-25 10:09:45,927 | INFO     | task id: 43401121
[2025-02-25 05:10:06] 2025-02-25 10:09:45,928 | INFO     | errors: (none)
[2025-02-25 05:10:06] 2025-02-25 10:09:45,928 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 05:10:06] 2025-02-25 10:09:45,928 | INFO     | pilot state: finished 
[2025-02-25 05:10:06] 2025-02-25 10:09:45,928 | INFO     | transexitcode: 0
[2025-02-25 05:10:06] 2025-02-25 10:09:45,928 | INFO     | exeerrorcode: 0
[2025-02-25 05:10:06] 2025-02-25 10:09:45,928 | INFO     | exeerrordiag: 
[2025-02-25 05:10:06] 2025-02-25 10:09:45,928 | INFO     | exitcode: 0
[2025-02-25 05:10:06] 2025-02-25 10:09:45,929 | INFO     | exitmsg: OK
[2025-02-25 05:10:06] 2025-02-25 10:09:45,929 | INFO     | cpuconsumptiontime: 47421 s
[2025-02-25 05:10:06] 2025-02-25 10:09:45,929 | INFO     | nevents: 400
[2025-02-25 05:10:06] 2025-02-25 10:09:45,929 | INFO     | neventsw: 0
[2025-02-25 05:10:06] 2025-02-25 10:09:45,929 | INFO     | pid: 3827
[2025-02-25 05:10:06] 2025-02-25 10:09:45,929 | INFO     | pgrp: 3827
[2025-02-25 05:10:06] 2025-02-25 10:09:45,929 | INFO     | corecount: 12
[2025-02-25 05:10:06] 2025-02-25 10:09:45,929 | INFO     | event service: False
[2025-02-25 05:10:06] 2025-02-25 10:09:45,930 | INFO     | sizes: {0: 2383182, 1: 2383381, 5: 2383587, 11: 2383643, 4985: 2409747, 4987: 2418688, 4991: 2418872, 4996: 2419042}
[2025-02-25 05:10:06] 2025-02-25 10:09:45,930 | INFO     | --------------------------------------------------
[2025-02-25 05:10:06] 2025-02-25 10:09:45,930 | INFO     | 
[2025-02-25 05:10:06] 2025-02-25 10:09:45,930 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 05:10:06] 2025-02-25 10:09:45,952 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 05:10:06] 2025-02-25 10:09:45,953 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 05:10:06] 2025-02-25 10:09:45,953 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 05:10:06] 2025-02-25 10:09:45,953 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 05:10:06] 2025-02-25 10:09:45,953 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 05:10:06] 2025-02-25 10:09:45,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 05:10:06] 2025-02-25 10:09:45,954 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 05:10:06] 2025-02-25 10:09:45,954 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 05:10:06] 2025-02-25 10:09:45,954 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 05:10:06] 2025-02-25 10:09:45,954 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 05:10:06] 2025-02-25 10:09:45,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 05:10:06] 2025-02-25 10:09:45,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 05:10:06] 2025-02-25 10:09:45,955 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 05:10:06] 2025-02-25 10:09:45,955 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 05:10:06] 2025-02-25 10:09:45,955 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 05:10:06] 2025-02-25 10:09:45,955 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 05:10:06] 2025-02-25 10:09:45,955 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 05:10:06] 2025-02-25 10:09:45,955 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 05:10:06] 2025-02-25 10:09:45,956 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 05:10:06] 2025-02-25 10:09:45,956 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 05:10:06] 2025-02-25 10:09:45,956 | INFO     | job 6529925171 has completed (purged errors)
[2025-02-25 05:10:06] 2025-02-25 10:09:45,956 | INFO     | overall cleanup function is called
[2025-02-25 05:10:06] 2025-02-25 10:09:46,964 | INFO     | --- collectZombieJob: --- 10, [3827]
[2025-02-25 05:10:06] 2025-02-25 10:09:46,965 | INFO     | zombie collector waiting for pid 3827
[2025-02-25 05:10:06] 2025-02-25 10:09:46,972 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 05:10:06] 2025-02-25 10:09:46,972 | INFO     | collected zombie processes
[2025-02-25 05:10:06] 2025-02-25 10:09:46,972 | INFO     | will attempt to kill all subprocesses of pid=3827
[2025-02-25 05:10:06] 2025-02-25 10:09:47,034 | INFO     | process IDs to be killed: [3827] (in reverse order)
[2025-02-25 05:10:06] 2025-02-25 10:09:47,083 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 05:10:06] 2025-02-25 10:09:47,083 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 05:10:06] 2025-02-25 10:09:47,087 | INFO     | did not find any defunct processes belonging to 3827
[2025-02-25 05:10:06] 2025-02-25 10:09:47,090 | INFO     | did not find any defunct processes belonging to 3827
[2025-02-25 05:10:06] 2025-02-25 10:09:47,090 | INFO     | ready for new job
[2025-02-25 05:10:06] 2025-02-25 10:09:47,090 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 05:10:06] 2025-02-25 10:09:47,091 | INFO     | **************************************
[2025-02-25 05:10:06] 2025-02-25 10:09:47,092 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 05:10:06] 2025-02-25 10:09:47,092 | INFO     | **************************************
[2025-02-25 05:10:06] 2025-02-25 10:09:47,092 | INFO     | 
[2025-02-25 05:10:06] 2025-02-25 10:09:47,092 | INFO     | architecture information:
[2025-02-25 05:10:06] 2025-02-25 10:09:47,093 | INFO     | executing command: cat /etc/os-release
[2025-02-25 05:10:06] 2025-02-25 10:09:47,107 | INFO     | cat /etc/os-release:
[2025-02-25 05:10:06] NAME="CentOS Linux"
[2025-02-25 05:10:06] VERSION="7 (Core)"
[2025-02-25 05:10:06] ID="centos"
[2025-02-25 05:10:06] ID_LIKE="rhel fedora"
[2025-02-25 05:10:06] VERSION_ID="7"
[2025-02-25 05:10:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 05:10:06] ANSI_COLOR="0;31"
[2025-02-25 05:10:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 05:10:06] HOME_URL="https://www.centos.org/"
[2025-02-25 05:10:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 05:10:06] 
[2025-02-25 05:10:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 05:10:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 05:10:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 05:10:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 05:10:06] 
[2025-02-25 05:10:06] 2025-02-25 10:09:47,108 | INFO     | **************************************
[2025-02-25 05:10:06] 2025-02-25 10:09:47,611 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 05:10:06] 2025-02-25 10:09:47,627 | INFO     | sufficient remaining disk space (29366419456 B)
[2025-02-25 05:10:06] 2025-02-25 10:09:47,628 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 05:10:06] 2025-02-25 10:09:47,628 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 05:10:06] 2025-02-25 10:09:47,628 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 05:10:06] 2025-02-25 10:09:47,628 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 05:10:06] 2025-02-25 10:09:47,852 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 05:10:06] 2025-02-25 10:09:47,853 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 05:10:06] 2025-02-25 10:09:47,853 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 05:10:06] 2025-02-25 10:09:47,907 | INFO     | all payload control threads have been joined
[2025-02-25 05:10:06] 2025-02-25 10:09:47,908 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 05:10:06] 2025-02-25 10:09:48,243 | INFO     | all data control threads have been joined
[2025-02-25 05:10:06] 2025-02-25 10:09:48,326 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 05:10:06] 2025-02-25 10:09:48,327 | INFO     | aborting loop
[2025-02-25 05:10:06] 2025-02-25 10:09:48,633 | INFO     | [job] retrieve thread has finished
[2025-02-25 05:10:06] 2025-02-25 10:09:48,634 | INFO     | [job] queue monitor thread has finished
[2025-02-25 05:10:06] 2025-02-25 10:09:48,900 | INFO     | [payload] validate_post thread has finished
[2025-02-25 05:10:06] 2025-02-25 10:09:48,912 | INFO     | [payload] control thread has finished
[2025-02-25 05:10:06] 2025-02-25 10:09:48,970 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 05:10:06] 2025-02-25 10:09:48,978 | INFO     | all job control threads have been joined
[2025-02-25 05:10:06] 2025-02-25 10:09:49,228 | INFO     | [data] copytool_in thread has finished
[2025-02-25 05:10:06] 2025-02-25 10:09:49,248 | INFO     | [data] control thread has finished
[2025-02-25 05:10:06] 2025-02-25 10:09:49,253 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 05:10:06] 2025-02-25 10:09:49,332 | INFO     | [job] job monitor thread has finished
[2025-02-25 05:10:06] 2025-02-25 10:09:49,911 | INFO     | [data] copytool_out thread has finished
[2025-02-25 05:10:06] 2025-02-25 10:09:49,917 | INFO     | [payload] failed_post thread has finished
[2025-02-25 05:10:06] 2025-02-25 10:09:49,944 | INFO     | [job] validate thread has finished
[2025-02-25 05:10:06] 2025-02-25 10:09:49,984 | INFO     | [job] control thread has finished
[2025-02-25 05:10:06] 2025-02-25 10:09:50,097 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 05:10:06] 2025-02-25 10:09:51,634 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 05:10:06] 2025-02-25 10:09:58,502 | INFO     | job.realtimelogging is not enabled
[2025-02-25 05:10:06] 2025-02-25 10:09:59,508 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 05:10:06] 2025-02-25 10:10:01,399 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139852621408064)>', '<ExcThread(monitor, started 139851491952384)>']
[2025-02-25 05:10:06] 2025-02-25 10:10:01,922 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 05:10:06] 2025-02-25 10:10:01,923 | INFO     | [monitor] control thread has ended
[2025-02-25 05:10:06] 2025-02-25 10:10:06,425 | INFO     | all workflow threads have been joined
[2025-02-25 05:10:06] 2025-02-25 10:10:06,427 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 05:10:06] 2025-02-25 10:10:06,429 | INFO     | traces error code: 0
[2025-02-25 05:10:06] 2025-02-25 10:10:06,429 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 05:10:06] 2025-02-25 10:10:06,530 [wrapper] ==== pilot stdout END ====
[2025-02-25 05:10:06] 2025-02-25 10:10:06,533 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 05:10:06] 2025-02-25 10:10:06,537 [wrapper] pilotpid: 29736
[2025-02-25 05:10:06] 2025-02-25 10:10:06,541 [wrapper] Pilot exit status: 0
[2025-02-25 05:10:06] 2025-02-25 10:10:06,557 [wrapper] pandaids: 6529925171
[2025-02-25 05:10:06] 2025-02-25 10:10:06,604 [wrapper] cleanup supervisor_pilot 11020 29737
[2025-02-25 05:10:06] 2025-02-25 10:10:06,608 [wrapper] Test setup, not cleaning
[2025-02-25 05:10:06] 2025-02-25 10:10:06,616 [wrapper] apfmon messages muted
[2025-02-25 05:10:06] 2025-02-25 10:10:06,620 [wrapper] ==== wrapper stdout END ====
[2025-02-25 05:10:06] 2025-02-25 10:10:06,624 [wrapper] ==== wrapper stderr END ====
[2025-02-25 05:10:06]  *** Error codes and diagnostics ***
[2025-02-25 05:10:06]     "exeErrorCode": 0,
[2025-02-25 05:10:06]     "exeErrorDiag": "",
[2025-02-25 05:10:06]     "pilotErrorCode": 0,
[2025-02-25 05:10:06]     "pilotErrorDiag": "",
[2025-02-25 05:10:06]  *** Listing of results directory ***
[2025-02-25 05:10:06] total 429996
[2025-02-25 05:10:06] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 03:44 queuedata.json
[2025-02-25 05:10:06] -rwx------ 1 boincer umatlas     35865 Feb 25 03:45 runpilot2-wrapper.sh
[2025-02-25 05:10:06] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 03:45 pilot3.tar.gz
[2025-02-25 05:10:06] -rw-r--r-- 1 boincer umatlas       100 Feb 25 03:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 05:10:06] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 03:45 run_atlas
[2025-02-25 05:10:06] -rw-r--r-- 1 boincer umatlas       105 Feb 25 03:45 job.xml
[2025-02-25 05:10:06] -rw-r--r-- 2 boincer umatlas 249975517 Feb 25 03:45 EVNT.43401119._000003.pool.root.1
[2025-02-25 05:10:06] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 03:45 start_atlas.sh
[2025-02-25 05:10:06] drwxrwx--x 2 boincer umatlas      4096 Feb 25 03:45 shared
[2025-02-25 05:10:06] -rw-r--r-- 2 boincer umatlas    503544 Feb 25 03:45 input.tar.gz
[2025-02-25 05:10:06] -rw-r--r-- 1 boincer umatlas         0 Feb 25 03:45 boinc_lockfile
[2025-02-25 05:10:06] -rw-r--r-- 1 boincer umatlas      2543 Feb 25 03:46 pandaJob.out
[2025-02-25 05:10:06] -rw------- 1 boincer umatlas       424 Feb 25 03:46 setup.sh.local
[2025-02-25 05:10:06] -rw------- 1 boincer umatlas    988867 Feb 25 03:46 agis_schedconf.cvmfs.json
[2025-02-25 05:10:06] -rw------- 1 boincer umatlas   1582519 Feb 25 03:46 agis_ddmendpoints.agis.ALL.json
[2025-02-25 05:10:06] drwx------ 4 boincer umatlas      4096 Feb 25 03:46 pilot3
[2025-02-25 05:10:06] -rw------- 1 boincer umatlas 184873948 Feb 25 05:09 HITS.43401121._000033.pool.root.1
[2025-02-25 05:10:06] -rw------- 1 boincer umatlas        95 Feb 25 05:09 pilot_heartbeat.json
[2025-02-25 05:10:06] -rw-r--r-- 1 boincer umatlas       529 Feb 25 05:09 boinc_task_state.xml
[2025-02-25 05:10:06] -rw------- 1 boincer umatlas      1044 Feb 25 05:09 memory_monitor_summary.json
[2025-02-25 05:10:06] -rw------- 1 boincer umatlas    359496 Feb 25 05:09 log.43401121._000033.job.log.tgz.1
[2025-02-25 05:10:06] -rw-r--r-- 1 boincer umatlas      5868 Feb 25 05:09 init_data.xml
[2025-02-25 05:10:06] -rw------- 1 boincer umatlas      7754 Feb 25 05:09 heartbeat.json
[2025-02-25 05:10:06] -rw-r--r-- 1 boincer umatlas        27 Feb 25 05:10 wrapper_checkpoint.txt
[2025-02-25 05:10:06] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 05:10 boinc_mmap_file
[2025-02-25 05:10:06] -rw------- 1 boincer umatlas      4287 Feb 25 05:10 pilotlog.txt
[2025-02-25 05:10:06] -rw------- 1 boincer umatlas    467671 Feb 25 05:10 log.43401121._000033.job.log.1
[2025-02-25 05:10:06] -rw------- 1 boincer umatlas       357 Feb 25 05:10 output.list
[2025-02-25 05:10:06] -rw-r--r-- 1 boincer umatlas       620 Feb 25 05:10 runtime_log
[2025-02-25 05:10:06] -rw------- 1 boincer umatlas    849920 Feb 25 05:10 result.tar.gz
[2025-02-25 05:10:06] -rw-r--r-- 1 boincer umatlas     11010 Feb 25 05:10 runtime_log.err
[2025-02-25 05:10:06] -rw------- 1 boincer umatlas       657 Feb 25 05:10 MuQODmDk566n9Rq4apOajLDm4fhM0noT9bVoFjIUDm9EfKDmWgwphm.diag
[2025-02-25 05:10:06] -rw-r--r-- 1 boincer umatlas     21687 Feb 25 05:10 stderr.txt
[2025-02-25 05:10:06] HITS file was successfully produced:
[2025-02-25 05:10:06] -rw------- 1 boincer umatlas 184873948 Feb 25 05:09 shared/HITS.pool.root.1
[2025-02-25 05:10:06]  *** Contents of shared directory: ***
[2025-02-25 05:10:06] total 426012
[2025-02-25 05:10:06] -rw-r--r-- 2 boincer umatlas 249975517 Feb 25 03:45 ATLAS.root_0
[2025-02-25 05:10:06] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 03:45 start_atlas.sh
[2025-02-25 05:10:06] -rw-r--r-- 2 boincer umatlas    503544 Feb 25 03:45 input.tar.gz
[2025-02-25 05:10:06] -rw------- 1 boincer umatlas 184873948 Feb 25 05:09 HITS.pool.root.1
[2025-02-25 05:10:06] -rw------- 1 boincer umatlas    849920 Feb 25 05:10 result.tar.gz
05:10:08 (26020): run_atlas exited; CPU time 47353.629130
05:10:08 (26020): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN