Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:46:21 (727419): wrapper (7.7.26015): starting
03:46:21 (727419): wrapper: running run_atlas (--nthreads 8)
[2025-02-25 03:46:21] Arguments: --nthreads 8
[2025-02-25 03:46:21] Threads: 8
[2025-02-25 03:46:21] Checking for CVMFS
[2025-02-25 03:46:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 03:46:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 03:46:23] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 03:46:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 03:46:24] 2.11.5.0 2738210 7481 446512 143032 3 437 23074844 37641216 30232 130560 0 2574119 99.118 6303175 21877 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 03:46:24] CVMFS is ok
[2025-02-25 03:46:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 03:46:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 03:46:24] Further information can be found at the LHC@home message board.
[2025-02-25 03:46:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 03:46:24] Checking for apptainer binary...
[2025-02-25 03:46:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 03:46:24] Running /usr/bin/apptainer --version
[2025-02-25 03:46:24] apptainer version 1.3.6-1.el9
[2025-02-25 03:46:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 03:46:25] c-1-3.aglt2.org
[2025-02-25 03:46:25] apptainer works
[2025-02-25 03:46:25] Set ATHENA_PROC_NUMBER=8
[2025-02-25 03:46:25] Set ATHENA_CORE_NUMBER=8
[2025-02-25 03:46:25] Starting ATLAS job with PandaID=6529925175
[2025-02-25 03:46:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 11:01:09]  *** The last 200 lines of the pilot log: ***
[2025-02-25 11:01:09] 2025-02-25 16:00:27,767 | INFO     | monitor loop #1393: job 0:6529925175 is in state 'finished'
[2025-02-25 11:01:09] 2025-02-25 16:00:27,836 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 11:01:09] 2025-02-25 16:00:27,835 | INFO     | sum of deviations: 294787224541.4258
[2025-02-25 11:01:09] 2025-02-25 16:00:27,900 | INFO     | mean x: 1740486148.2535884
[2025-02-25 11:01:09] 2025-02-25 16:00:27,900 | INFO     | mean y: 2065643.3827751195
[2025-02-25 11:01:09] 2025-02-25 16:00:27,900 | INFO     | -- intersect: -22653543255.814827
[2025-02-25 11:01:09] 2025-02-25 16:00:27,901 | INFO     | intersect: -22653543255.814827
[2025-02-25 11:01:09] 2025-02-25 16:00:27,901 | INFO     | chi2: 6.5895417137982495
[2025-02-25 11:01:09] 2025-02-25 16:00:27,901 | INFO     | current chi2=6.5895417137982495 (change=16.570777843925416 %)
[2025-02-25 11:01:09] 2025-02-25 16:00:27,901 | INFO     | right removable region: 417
[2025-02-25 11:01:09] 2025-02-25 16:00:27,902 | INFO     | model: linear, x: [1740473734.0, 1740473795.0, 1740473856.0, 1740473917.0, 1740473978.0, 1740474039.0, 1740474100.0, 1740474162.0, 1740474222.0, 1740474283.0, 1740
[2025-02-25 11:01:09] 2025-02-25 16:00:27,902 | INFO     | sum of square deviations: 22646482842.09587
[2025-02-25 11:01:09] 2025-02-25 16:00:27,934 | INFO     | sum of deviations: 154847946308.86133
[2025-02-25 11:01:09] 2025-02-25 16:00:27,935 | INFO     | mean x: 1740486453.2583733
[2025-02-25 11:01:09] 2025-02-25 16:00:27,935 | INFO     | mean y: 2076719.8253588516
[2025-02-25 11:01:09] 2025-02-25 16:00:27,935 | INFO     | -- intersect: -11898700753.861612
[2025-02-25 11:01:09] 2025-02-25 16:00:27,996 | INFO     | intersect: -11898700753.861612
[2025-02-25 11:01:09] 2025-02-25 16:00:27,997 | INFO     | chi2: 4.805355603082149
[2025-02-25 11:01:09] 2025-02-25 16:00:27,997 | INFO     | current chi2=4.805355603082149 (change=39.160096777444444 %)
[2025-02-25 11:01:09] 2025-02-25 16:00:27,998 | INFO     | model: linear, x: [1740474039.0, 1740474100.0, 1740474162.0, 1740474222.0, 1740474283.0, 1740474345.0, 1740474405.0, 1740474466.0, 1740474527.0, 1740474589.0, 1740
[2025-02-25 11:01:09] 2025-02-25 16:00:27,998 | INFO     | sum of square deviations: 21843385051.685295
[2025-02-25 11:01:09] 2025-02-25 16:00:28,031 | INFO     | sum of deviations: 83046074683.84985
[2025-02-25 11:01:09] 2025-02-25 16:00:28,031 | INFO     | mean x: 1740486605.7675545
[2025-02-25 11:01:09] 2025-02-25 16:00:28,031 | INFO     | mean y: 2090349.2276029056
[2025-02-25 11:01:09] 2025-02-25 16:00:28,031 | INFO     | -- intersect: -6615042494.734274
[2025-02-25 11:01:09] 2025-02-25 16:00:28,032 | INFO     | intersect: -6615042494.734274
[2025-02-25 11:01:09] 2025-02-25 16:00:28,032 | INFO     | chi2: 3.315612548987001
[2025-02-25 11:01:09] 2025-02-25 16:00:28,032 | INFO     | current chi2=3.315612548987001 (change=31.001723434153945 %)
[2025-02-25 11:01:09] 2025-02-25 16:00:28,033 | INFO     | model: linear, x: [1740474345.0, 1740474405.0, 1740474466.0, 1740474527.0, 1740474589.0, 1740474650.0, 1740474711.0, 1740474771.0, 1740474832.0, 1740474893.0, 1740
[2025-02-25 11:01:09] 2025-02-25 16:00:28,065 | INFO     | sum of square deviations: 21059522117.254986
[2025-02-25 11:01:09] 2025-02-25 16:00:28,099 | INFO     | sum of deviations: 16441640451.294182
[2025-02-25 11:01:09] 2025-02-25 16:00:28,099 | INFO     | mean x: 1740486758.27451
[2025-02-25 11:01:09] 2025-02-25 16:00:28,100 | INFO     | mean y: 2103302.595588235
[2025-02-25 11:01:09] 2025-02-25 16:00:28,100 | INFO     | -- intersect: -1356733680.0509148
[2025-02-25 11:01:09] 2025-02-25 16:00:28,100 | INFO     | intersect: -1356733680.0509148
[2025-02-25 11:01:09] 2025-02-25 16:00:28,100 | INFO     | chi2: 2.028874921648881
[2025-02-25 11:01:09] 2025-02-25 16:00:28,101 | INFO     | current chi2=2.028874921648881 (change=38.808443638302954 %)
[2025-02-25 11:01:09] 2025-02-25 16:00:28,101 | INFO     | model: linear, x: [1740474650.0, 1740474711.0, 1740474771.0, 1740474832.0, 1740474893.0, 1740474956.0, 1740475016.0, 1740475076.0, 1740475142.0, 1740475201.0, 1740
[2025-02-25 11:01:09] 2025-02-25 16:00:28,101 | INFO     | sum of square deviations: 20294661171.344982
[2025-02-25 11:01:09] 2025-02-25 16:00:28,105 | INFO     | sum of deviations: -22120699048.960297
[2025-02-25 11:01:09] 2025-02-25 16:00:28,105 | INFO     | mean x: 1740486910.7791564
[2025-02-25 11:01:09] 2025-02-25 16:00:28,105 | INFO     | mean y: 2110976.5285359803
[2025-02-25 11:01:09] 2025-02-25 16:00:28,105 | INFO     | -- intersect: 1899200404.4792457
[2025-02-25 11:01:09] 2025-02-25 16:00:28,105 | INFO     | intersect: 1899200404.4792457
[2025-02-25 11:01:09] 2025-02-25 16:00:28,106 | INFO     | chi2: 1.5638598221533173
[2025-02-25 11:01:09] 2025-02-25 16:00:28,106 | INFO     | current chi2=1.5638598221533173 (change=22.919850530640034 %)
[2025-02-25 11:01:09] 2025-02-25 16:00:28,106 | INFO     | left removable region: 40
[2025-02-25 11:01:09] 2025-02-25 16:00:28,107 | INFO     | model: linear, x: [1740475871.0, 1740475930.0, 1740475992.0, 1740476053.0, 1740476116.0, 1740476174.0, 1740476236.0, 1740476296.0, 1740476357.0, 1740476418.0, 1740
[2025-02-25 11:01:09] 2025-02-25 16:00:28,108 | INFO     | sum of square deviations: 16614828812.51455
[2025-02-25 11:01:09] 2025-02-25 16:00:28,111 | INFO     | sum of deviations: 11259721671.56233
[2025-02-25 11:01:09] 2025-02-25 16:00:28,112 | INFO     | mean x: 1740487337.7612731
[2025-02-25 11:01:09] 2025-02-25 16:00:28,112 | INFO     | mean y: 2120855.1618037135
[2025-02-25 11:01:09] 2025-02-25 16:00:28,112 | INFO     | -- intersect: -1177391929.3039238
[2025-02-25 11:01:09] 2025-02-25 16:00:28,112 | INFO     | intersect: -1177391929.3039238
[2025-02-25 11:01:09] 2025-02-25 16:00:28,112 | INFO     | chi2: 0.19246890926562393
[2025-02-25 11:01:09] 2025-02-25 16:00:28,113 | INFO     | -- intersect: -1177391929.3039238
[2025-02-25 11:01:09] 2025-02-25 16:00:28,113 | INFO     | current memory leak: 0.68 B/s (using 377 data points, chi2=0.19)
[2025-02-25 11:01:09] 2025-02-25 16:00:28,114 | INFO     | ..............................
[2025-02-25 11:01:09] 2025-02-25 16:00:28,114 | INFO     | . Timing measurements:
[2025-02-25 11:01:09] 2025-02-25 16:00:28,114 | INFO     | . get job = 0 s
[2025-02-25 11:01:09] 2025-02-25 16:00:28,114 | INFO     | . initial setup = 4 s
[2025-02-25 11:01:09] 2025-02-25 16:00:28,114 | INFO     | . payload setup = 49 s
[2025-02-25 11:01:09] 2025-02-25 16:00:28,114 | INFO     | . stage-in = 0 s
[2025-02-25 11:01:09] 2025-02-25 16:00:28,114 | INFO     | . payload execution = 25779 s
[2025-02-25 11:01:09] 2025-02-25 16:00:28,114 | INFO     | . stage-out = 6 s
[2025-02-25 11:01:09] 2025-02-25 16:00:28,114 | INFO     | . log creation = 2 s
[2025-02-25 11:01:09] 2025-02-25 16:00:28,114 | INFO     | ..............................
[2025-02-25 11:01:09] 2025-02-25 16:00:28,498 | INFO     | 
[2025-02-25 11:01:09] 2025-02-25 16:00:28,499 | INFO     | job summary report
[2025-02-25 11:01:09] 2025-02-25 16:00:28,499 | INFO     | --------------------------------------------------
[2025-02-25 11:01:09] 2025-02-25 16:00:28,499 | INFO     | PanDA job id: 6529925175
[2025-02-25 11:01:09] 2025-02-25 16:00:28,499 | INFO     | task id: 43401121
[2025-02-25 11:01:09] 2025-02-25 16:00:28,499 | INFO     | errors: (none)
[2025-02-25 11:01:09] 2025-02-25 16:00:28,499 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 11:01:09] 2025-02-25 16:00:28,499 | INFO     | pilot state: finished 
[2025-02-25 11:01:09] 2025-02-25 16:00:28,499 | INFO     | transexitcode: 0
[2025-02-25 11:01:09] 2025-02-25 16:00:28,499 | INFO     | exeerrorcode: 0
[2025-02-25 11:01:09] 2025-02-25 16:00:28,499 | INFO     | exeerrordiag: 
[2025-02-25 11:01:09] 2025-02-25 16:00:28,499 | INFO     | exitcode: 0
[2025-02-25 11:01:09] 2025-02-25 16:00:28,500 | INFO     | exitmsg: OK
[2025-02-25 11:01:09] 2025-02-25 16:00:28,500 | INFO     | cpuconsumptiontime: 49175 s
[2025-02-25 11:01:09] 2025-02-25 16:00:28,500 | INFO     | nevents: 400
[2025-02-25 11:01:09] 2025-02-25 16:00:28,500 | INFO     | neventsw: 0
[2025-02-25 11:01:09] 2025-02-25 16:00:28,500 | INFO     | pid: 822605
[2025-02-25 11:01:09] 2025-02-25 16:00:28,500 | INFO     | pgrp: 822605
[2025-02-25 11:01:09] 2025-02-25 16:00:28,500 | INFO     | corecount: 8
[2025-02-25 11:01:09] 2025-02-25 16:00:28,500 | INFO     | event service: False
[2025-02-25 11:01:09] 2025-02-25 16:00:28,504 | INFO     | sizes: {0: 2382525, 1: 2383210, 2: 2383210, 3: 2383409, 4: 2383437, 14: 2383465, 26: 2383621, 37: 2383649, 41: 2383883, 48: 2383911, 25830: 2418852, 25832: 2419131
[2025-02-25 11:01:09] 2025-02-25 16:00:28,504 | INFO     | --------------------------------------------------
[2025-02-25 11:01:09] 2025-02-25 16:00:28,504 | INFO     | 
[2025-02-25 11:01:09] 2025-02-25 16:00:28,505 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-02-25 11:01:09] 2025-02-25 16:00:29,043 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 11:01:09] 2025-02-25 16:00:29,044 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 11:01:09] 2025-02-25 16:00:29,044 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 11:01:09] 2025-02-25 16:00:29,044 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 11:01:09] 2025-02-25 16:00:29,044 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 11:01:09] 2025-02-25 16:00:29,044 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 11:01:09] 2025-02-25 16:00:29,044 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 11:01:09] 2025-02-25 16:00:29,044 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 11:01:09] 2025-02-25 16:00:29,044 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 11:01:09] 2025-02-25 16:00:29,044 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 11:01:09] 2025-02-25 16:00:29,045 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 11:01:09] 2025-02-25 16:00:29,045 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 11:01:09] 2025-02-25 16:00:29,045 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 11:01:09] 2025-02-25 16:00:29,045 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 11:01:09] 2025-02-25 16:00:29,045 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 11:01:09] 2025-02-25 16:00:29,045 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 11:01:09] 2025-02-25 16:00:29,045 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 11:01:09] 2025-02-25 16:00:29,045 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 11:01:09] 2025-02-25 16:00:29,045 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 11:01:09] 2025-02-25 16:00:29,045 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 11:01:09] 2025-02-25 16:00:29,045 | INFO     | job 6529925175 has completed (purged errors)
[2025-02-25 11:01:09] 2025-02-25 16:00:29,046 | INFO     | overall cleanup function is called
[2025-02-25 11:01:09] 2025-02-25 16:00:30,150 | INFO     | --- collectZombieJob: --- 10, [822605]
[2025-02-25 11:01:09] 2025-02-25 16:00:30,150 | INFO     | zombie collector waiting for pid 822605
[2025-02-25 11:01:09] 2025-02-25 16:00:30,150 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 11:01:09] 2025-02-25 16:00:30,150 | INFO     | collected zombie processes
[2025-02-25 11:01:09] 2025-02-25 16:00:30,151 | INFO     | will attempt to kill all subprocesses of pid=822605
[2025-02-25 11:01:09] 2025-02-25 16:00:31,689 | INFO     | PID=754441 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-02-25 11:01:09] 2025-02-25 16:00:31,689 | INFO     | .. there are 77 such processes running
[2025-02-25 11:01:09] 2025-02-25 16:00:34,100 | INFO     | process IDs to be killed: [822605] (in reverse order)
[2025-02-25 11:01:09] 2025-02-25 16:00:35,349 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 11:01:09] 2025-02-25 16:00:35,350 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 11:01:09] 2025-02-25 16:00:35,440 | INFO     | did not find any defunct processes belonging to 822605
[2025-02-25 11:01:09] 2025-02-25 16:00:35,469 | INFO     | did not find any defunct processes belonging to 822605
[2025-02-25 11:01:09] 2025-02-25 16:00:35,470 | INFO     | ready for new job
[2025-02-25 11:01:09] 2025-02-25 16:00:35,470 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 11:01:09] 2025-02-25 16:00:35,473 | INFO     | **************************************
[2025-02-25 11:01:09] 2025-02-25 16:00:35,473 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 11:01:09] 2025-02-25 16:00:35,473 | INFO     | **************************************
[2025-02-25 11:01:09] 2025-02-25 16:00:35,473 | INFO     | 
[2025-02-25 11:01:09] 2025-02-25 16:00:35,478 | INFO     | architecture information:
[2025-02-25 11:01:09] 2025-02-25 16:00:35,490 | INFO     | executing command: cat /etc/os-release
[2025-02-25 11:01:09] 2025-02-25 16:00:35,619 | INFO     | cat /etc/os-release:
[2025-02-25 11:01:09] NAME="CentOS Linux"
[2025-02-25 11:01:09] VERSION="7 (Core)"
[2025-02-25 11:01:09] ID="centos"
[2025-02-25 11:01:09] ID_LIKE="rhel fedora"
[2025-02-25 11:01:09] VERSION_ID="7"
[2025-02-25 11:01:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 11:01:09] ANSI_COLOR="0;31"
[2025-02-25 11:01:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 11:01:09] HOME_URL="https://www.centos.org/"
[2025-02-25 11:01:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 11:01:09] 
[2025-02-25 11:01:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 11:01:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 11:01:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 11:01:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 11:01:09] 
[2025-02-25 11:01:09] 2025-02-25 16:00:35,620 | INFO     | **************************************
[2025-02-25 11:01:09] 2025-02-25 16:00:36,123 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-02-25 11:01:09] 2025-02-25 16:00:36,308 | INFO     | sufficient remaining disk space (61629005824 B)
[2025-02-25 11:01:09] 2025-02-25 16:00:36,313 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 11:01:09] 2025-02-25 16:00:36,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 11:01:09] 2025-02-25 16:00:36,315 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 11:01:09] 2025-02-25 16:00:36,315 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 11:01:09] 2025-02-25 16:00:36,316 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 11:01:09] 2025-02-25 16:00:36,316 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 11:01:09] 2025-02-25 16:00:36,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 11:01:09] 2025-02-25 16:00:36,428 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 11:01:09] 2025-02-25 16:00:36,428 | INFO     | aborting loop
[2025-02-25 11:01:09] 2025-02-25 16:00:36,525 | INFO     | all data control threads have been joined
[2025-02-25 11:01:09] 2025-02-25 16:00:37,165 | INFO     | all job control threads have been joined
[2025-02-25 11:01:09] 2025-02-25 16:00:37,319 | INFO     | [job] retrieve thread has finished
[2025-02-25 11:01:09] 2025-02-25 16:00:37,365 | INFO     | [payload] validate_post thread has finished
[2025-02-25 11:01:09] 2025-02-25 16:00:37,366 | INFO     | all payload control threads have been joined
[2025-02-25 11:01:09] 2025-02-25 16:00:37,435 | INFO     | [job] job monitor thread has finished
[2025-02-25 11:01:09] 2025-02-25 16:00:37,511 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 11:01:09] 2025-02-25 16:00:37,552 | INFO     | [data] control thread has finished
[2025-02-25 11:01:09] 2025-02-25 16:00:37,578 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 11:01:09] 2025-02-25 16:00:37,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 11:01:09] 2025-02-25 16:00:37,973 | INFO     | [payload] failed_post thread has finished
[2025-02-25 11:01:09] 2025-02-25 16:00:38,020 | INFO     | [job] validate thread has finished
[2025-02-25 11:01:09] 2025-02-25 16:00:38,021 | INFO     | [data] copytool_in thread has finished
[2025-02-25 11:01:09] 2025-02-25 16:00:38,021 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 11:01:09] 2025-02-25 16:00:38,105 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 11:01:09] 2025-02-25 16:00:38,106 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 11:01:09] 2025-02-25 16:00:38,171 | INFO     | [job] control thread has finished
[2025-02-25 11:01:09] 2025-02-25 16:00:38,371 | INFO     | [payload] control thread has finished
[2025-02-25 11:01:09] 2025-02-25 16:00:38,584 | INFO     | [job] queue monitor thread has finished
[2025-02-25 11:01:09] 2025-02-25 16:00:39,758 | INFO     | [data] copytool_out thread has finished
[2025-02-25 11:01:09] 2025-02-25 16:00:40,352 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 11:01:09] 2025-02-25 16:00:40,682 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139646177003328)>', '<ExcThread(monitor, started 139645534848768)>']
[2025-02-25 11:01:09] 2025-02-25 16:00:41,381 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 11:01:09] 2025-02-25 16:00:41,381 | INFO     | [monitor] control thread has ended
[2025-02-25 11:01:09] 2025-02-25 16:00:45,708 | INFO     | all workflow threads have been joined
[2025-02-25 11:01:09] 2025-02-25 16:00:45,708 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 11:01:09] 2025-02-25 16:00:45,709 | INFO     | traces error code: 0
[2025-02-25 11:01:09] 2025-02-25 16:00:45,709 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 11:01:09] 2025-02-25 16:00:46,382 [wrapper] ==== pilot stdout END ====
[2025-02-25 11:01:09] 2025-02-25 16:00:46,401 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 11:01:09] 2025-02-25 16:00:46,420 [wrapper] pilotpid: 754441
[2025-02-25 11:01:09] 2025-02-25 16:00:46,441 [wrapper] Pilot exit status: 0
[2025-02-25 11:01:09] 2025-02-25 16:00:46,580 [wrapper] pandaids: 6529925175
[2025-02-25 11:01:09] 2025-02-25 16:00:46,966 [wrapper] cleanup supervisor_pilot 1452392 754442
[2025-02-25 11:01:09] 2025-02-25 16:00:47,011 [wrapper] Test setup, not cleaning
[2025-02-25 11:01:09] 2025-02-25 16:00:47,084 [wrapper] apfmon messages muted
[2025-02-25 11:01:09] 2025-02-25 16:00:47,125 [wrapper] ==== wrapper stdout END ====
[2025-02-25 11:01:09] 2025-02-25 16:00:47,140 [wrapper] ==== wrapper stderr END ====
[2025-02-25 11:01:09]  *** Error codes and diagnostics ***
[2025-02-25 11:01:09]     "exeErrorCode": 0,
[2025-02-25 11:01:09]     "exeErrorDiag": "",
[2025-02-25 11:01:09]     "pilotErrorCode": 0,
[2025-02-25 11:01:09]     "pilotErrorDiag": "",
[2025-02-25 11:01:09]  *** Listing of results directory ***
[2025-02-25 11:01:09] total 432340
[2025-02-25 11:01:09] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 03:44 queuedata.json
[2025-02-25 11:01:09] -rwx------. 1 boincer umatlas     35865 Feb 25 03:45 runpilot2-wrapper.sh
[2025-02-25 11:01:09] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 03:45 pilot3.tar.gz
[2025-02-25 11:01:09] -rw-r--r--. 1 boincer umatlas       100 Feb 25 03:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 11:01:09] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 03:46 run_atlas
[2025-02-25 11:01:09] -rw-r--r--. 1 boincer umatlas       105 Feb 25 03:46 job.xml
[2025-02-25 11:01:09] -rw-r--r--. 2 boincer umatlas 249975517 Feb 25 03:46 EVNT.43401119._000003.pool.root.1
[2025-02-25 11:01:09] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 03:46 start_atlas.sh
[2025-02-25 11:01:09] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 03:46 shared
[2025-02-25 11:01:09] -rw-r--r--. 2 boincer umatlas    503545 Feb 25 03:46 input.tar.gz
[2025-02-25 11:01:09] -rw-r--r--. 1 boincer umatlas         0 Feb 25 03:46 boinc_lockfile
[2025-02-25 11:01:09] -rw-r--r--. 1 boincer umatlas      2543 Feb 25 03:46 pandaJob.out
[2025-02-25 11:01:09] -rw-------. 1 boincer umatlas       467 Feb 25 03:46 setup.sh.local
[2025-02-25 11:01:09] -rw-------. 1 boincer umatlas    988867 Feb 25 03:47 agis_schedconf.cvmfs.json
[2025-02-25 11:01:09] drwx------. 4 boincer umatlas      4096 Feb 25 03:47 pilot3
[2025-02-25 11:01:09] -rw-------. 1 boincer umatlas 183062309 Feb 25 10:58 HITS.43401121._000037.pool.root.1
[2025-02-25 11:01:09] -rw-r--r--. 1 boincer umatlas      6837 Feb 25 10:58 init_data.xml
[2025-02-25 11:01:09] -rw-r--r--. 1 boincer umatlas       530 Feb 25 10:58 boinc_task_state.xml
[2025-02-25 11:01:09] -rw-------. 1 boincer umatlas      1040 Feb 25 10:59 memory_monitor_summary.json
[2025-02-25 11:01:09] -rw-------. 1 boincer umatlas   1577983 Feb 25 10:59 agis_ddmendpoints.agis.ALL.json
[2025-02-25 11:01:09] -rw-------. 1 boincer umatlas    519735 Feb 25 10:59 log.43401121._000037.job.log.tgz.1
[2025-02-25 11:01:09] -rw-------. 1 boincer umatlas      7723 Feb 25 11:00 heartbeat.json
[2025-02-25 11:01:09] -rw-------. 1 boincer umatlas        95 Feb 25 11:00 pilot_heartbeat.json
[2025-02-25 11:01:09] -rw-------. 1 boincer umatlas      4338 Feb 25 11:00 pilotlog.txt
[2025-02-25 11:01:09] -rw-------. 1 boincer umatlas   2419984 Feb 25 11:00 log.43401121._000037.job.log.1
[2025-02-25 11:01:09] -rw-------. 1 boincer umatlas       357 Feb 25 11:00 output.list
[2025-02-25 11:01:09] -rw-r--r--. 1 boincer umatlas       620 Feb 25 11:00 runtime_log
[2025-02-25 11:01:09] -rw-------. 1 boincer umatlas   2959360 Feb 25 11:00 result.tar.gz
[2025-02-25 11:01:09] -rw-r--r--. 1 boincer umatlas     11404 Feb 25 11:00 runtime_log.err
[2025-02-25 11:01:09] -rw-------. 1 boincer umatlas       656 Feb 25 11:00 IcIKDmEk566n9Rq4apOajLDm4fhM0noT9bVoFjIUDmCFfKDmKBrHPo.diag
[2025-02-25 11:01:09] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 11:01 boinc_mmap_file
[2025-02-25 11:01:09] -rw-r--r--. 1 boincer umatlas        28 Feb 25 11:01 wrapper_checkpoint.txt
[2025-02-25 11:01:09] -rw-r--r--. 1 boincer umatlas     21760 Feb 25 11:01 stderr.txt
[2025-02-25 11:01:09] HITS file was successfully produced:
[2025-02-25 11:01:09] -rw-------. 1 boincer umatlas 183062309 Feb 25 10:58 shared/HITS.pool.root.1
[2025-02-25 11:01:09]  *** Contents of shared directory: ***
[2025-02-25 11:01:09] total 426300
[2025-02-25 11:01:09] -rw-r--r--. 2 boincer umatlas 249975517 Feb 25 03:46 ATLAS.root_0
[2025-02-25 11:01:09] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 03:46 start_atlas.sh
[2025-02-25 11:01:09] -rw-r--r--. 2 boincer umatlas    503545 Feb 25 03:46 input.tar.gz
[2025-02-25 11:01:09] -rw-------. 1 boincer umatlas 183062309 Feb 25 10:58 HITS.pool.root.1
[2025-02-25 11:01:09] -rw-------. 1 boincer umatlas   2959360 Feb 25 11:00 result.tar.gz
11:01:11 (727419): run_atlas exited; CPU time 49196.005152
11:01:11 (727419): called boinc_finish(0)

</stderr_txt>
]]>

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