Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-25 01:09:09 (8127): Detected: vboxwrapper 26206
2025-02-25 01:09:09 (8127): Detected: BOINC client v8.1.0
2025-02-25 01:09:09 (8127): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-02-25 01:09:09 (8127): Successfully copied 'init_data.xml' to the shared directory.
2025-02-25 01:09:09 (8127): Create VM. (boinc_312f7950ad62d925, slot#2)
2025-02-25 01:09:10 (8127): Setting Memory Size for VM. (4200MB)
2025-02-25 01:09:10 (8127): Setting CPU Count for VM. (2)
2025-02-25 01:09:10 (8127): Setting Chipset Options for VM.
2025-02-25 01:09:10 (8127): Setting Graphics Controller Options for VM.
2025-02-25 01:09:10 (8127): Setting Boot Options for VM.
2025-02-25 01:09:10 (8127): Setting Network Configuration for NAT.
2025-02-25 01:09:10 (8127): Enabling VM Network Access.
2025-02-25 01:09:11 (8127): Disabling USB Support for VM.
2025-02-25 01:09:11 (8127): Disabling COM Port Support for VM.
2025-02-25 01:09:11 (8127): Disabling LPT Port Support for VM.
2025-02-25 01:09:11 (8127): Disabling Audio Support for VM.
2025-02-25 01:09:11 (8127): Disabling Clipboard Support for VM.
2025-02-25 01:09:11 (8127): Disabling Drag and Drop Support for VM.
2025-02-25 01:09:11 (8127): Adding storage controller(s) to VM.
2025-02-25 01:09:12 (8127): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-25 01:09:14 (8127): Adding VirtualBox Guest Additions to VM.
2025-02-25 01:09:14 (8127): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-25 01:09:14 (8127): forwarding host port 46293 to guest port 80
2025-02-25 01:09:14 (8127): Enabling remote desktop for VM.
2025-02-25 01:09:14 (8127): Required extension pack not installed, remote desktop not enabled.
2025-02-25 01:09:14 (8127): Enabling shared directory for VM.
2025-02-25 01:09:14 (8127): Starting VM using VBoxManage interface. (boinc_312f7950ad62d925, slot#2)
2025-02-25 01:09:16 (8127): Successfully started VM. (PID = '8663')
2025-02-25 01:09:16 (8127): Reporting VM Process ID to BOINC.
2025-02-25 01:09:16 (8127): Guest Log: BIOS: VirtualBox 7.1.4
2025-02-25 01:09:16 (8127): Guest Log: CPUID EDX: 0x178bfbff
2025-02-25 01:09:16 (8127): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-25 01:09:16 (8127): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-25 01:09:16 (8127): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-25 01:09:16 (8127): Detected: Web Application Enabled (http://localhost:46293)
2025-02-25 01:09:16 (8127): Preference change detected
2025-02-25 01:09:16 (8127): Setting CPU throttle for VM. (100%)
2025-02-25 01:09:16 (8127): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-25 01:09:18 (8127): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-25 01:09:18 (8127): Guest Log: BIOS: Booting from Hard Disk...
2025-02-25 01:09:21 (8127): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-25 01:09:21 (8127): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-25 01:09:21 (8127): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-25 01:09:30 (8127): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-25 01:09:30 (8127): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-25 01:10:05 (8127): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-25 01:10:05 (8127): Guest Log: 00:00:00.000195 main     Log opened 2025-02-25T06:10:04.465570000Z
2025-02-25 01:10:05 (8127): Guest Log: 00:00:00.000317 main     OS Product: Linux
2025-02-25 01:10:05 (8127): Guest Log: 00:00:00.000337 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-25 01:10:05 (8127): Guest Log: 00:00:00.000349 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-25 01:10:05 (8127): Guest Log: 00:00:00.000361 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-25 01:10:05 (8127): Guest Log: 00:00:00.000362 main     Process ID: 1292
2025-02-25 01:10:05 (8127): Guest Log: 00:00:00.000362 main     Package type: LINUX_64BITS_GENERIC
2025-02-25 01:10:05 (8127): Guest Log: 00:00:00.001507 main     5.2.32 r132073 started. Verbose level = 0
2025-02-25 01:10:08 (8127): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-25 01:10:08 (8127): Guest Log: [INFO] Mounting shared directory
2025-02-25 01:10:08 (8127): Guest Log: [INFO] Checking for init_data.xml
2025-02-25 01:10:31 (8127): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-25 01:10:31 (8127): Guest Log: [INFO] Detected branch: prod
2025-02-25 01:10:32 (8127): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-25 01:10:32 (8127): Guest Log: Copying input files
2025-02-25 01:10:33 (8127): Guest Log: Copied input files into RunAtlas.
2025-02-25 01:10:33 (8127): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-25 01:10:33 (8127): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-25 01:10:33 (8127): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-25 01:10:33 (8127): Guest Log: Further information can be found at the LHC@home message board.
2025-02-25 01:10:48 (8127): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-25 01:10:48 (8127): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-25 01:10:48 (8127): Guest Log: 2.6.3.0 1578 0 30124 143028 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-25 01:10:53 (8127): Guest Log: copied the webapp to /var/www
2025-02-25 01:10:53 (8127): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-25 01:10:53 (8127): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-25 01:10:54 (8127): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-25 01:10:54 (8127): Guest Log:  *** Starting ATLAS job. (PandaID=6529680274 taskID=43205094) ***
2025-02-25 02:48:16 (8127): Status Report: Elapsed Time: '6000.000000'
2025-02-25 02:48:16 (8127): Status Report: CPU Time: '9794.250000'
2025-02-25 04:27:17 (8127): Status Report: Elapsed Time: '12000.000000'
2025-02-25 04:27:17 (8127): Status Report: CPU Time: '21671.800000'
2025-02-25 06:06:18 (8127): Status Report: Elapsed Time: '18000.000000'
2025-02-25 06:06:18 (8127): Status Report: CPU Time: '33549.790000'
2025-02-25 07:45:18 (8127): Status Report: Elapsed Time: '24000.000000'
2025-02-25 07:45:18 (8127): Status Report: CPU Time: '45427.150000'
2025-02-25 08:38:34 (8127): Guest Log:  *** Job finished ***
2025-02-25 08:38:34 (8127): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-25 08:38:34 (8127): Guest Log: 2025-02-25 13:38:23,445 | INFO     | [payload] control thread has finished
2025-02-25 08:38:34 (8127): Guest Log: 2025-02-25 13:38:23,500 | INFO     | [job] control thread has finished
2025-02-25 08:38:34 (8127): Guest Log: 2025-02-25 13:38:25,474 | INFO     | [data] queue_monitor thread has finished
2025-02-25 08:38:34 (8127): Guest Log: 2025-02-25 13:38:26,720 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140516019746624)>', '<ExcThread(monitor, started 140515735488256)>']
2025-02-25 08:38:34 (8127): Guest Log: 2025-02-25 13:38:27,191 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-25 08:38:34 (8127): Guest Log: 2025-02-25 13:38:27,191 | INFO     | [monitor] control thread has ended
2025-02-25 08:38:34 (8127): Guest Log: 2025-02-25 13:38:31,726 | INFO     | all workflow threads have been joined
2025-02-25 08:38:34 (8127): Guest Log: 2025-02-25 13:38:31,726 | INFO     | end of generic workflow (traces error code: 0)
2025-02-25 08:38:34 (8127): Guest Log: 2025-02-25 13:38:31,726 | INFO     | traces error code: 0
2025-02-25 08:38:34 (8127): Guest Log: 2025-02-25 13:38:31,726 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-25 08:38:34 (8127): Guest Log: 2025-02-25 13:38:31,910 [wrapper] ==== pilot stdout END ====
2025-02-25 08:38:34 (8127): Guest Log: 2025-02-25 13:38:31,915 [wrapper] ==== wrapper stdout RESUME ====
2025-02-25 08:38:34 (8127): Guest Log: 2025-02-25 13:38:31,920 [wrapper] pilotpid: 5891
2025-02-25 08:38:34 (8127): Guest Log: 2025-02-25 13:38:31,925 [wrapper] Pilot exit status: 0
2025-02-25 08:38:34 (8127): Guest Log: 2025-02-25 13:38:32,055 [wrapper] pandaids: 6529680274
2025-02-25 08:38:34 (8127): Guest Log: 2025-02-25 13:38:32,082 [wrapper] cleanup supervisor_pilot  4748 5892
2025-02-25 08:38:34 (8127): Guest Log: 2025-02-25 13:38:32,087 [wrapper] Test setup, not cleaning
2025-02-25 08:38:34 (8127): Guest Log: 2025-02-25 13:38:32,098 [wrapper] apfmon messages muted
2025-02-25 08:38:34 (8127): Guest Log: 2025-02-25 13:38:32,103 [wrapper] ==== wrapper stdout END ====
2025-02-25 08:38:34 (8127): Guest Log: 2025-02-25 13:38:32,108 [wrapper] ==== wrapper stderr END ====
2025-02-25 08:38:34 (8127): Guest Log:  *** Error codes and diagnostics ***
2025-02-25 08:38:34 (8127): Guest Log:     "exeErrorCode": 0,
2025-02-25 08:38:34 (8127): Guest Log:     "exeErrorDiag": "",
2025-02-25 08:38:34 (8127): Guest Log:     "pilotErrorCode": 0,
2025-02-25 08:38:34 (8127): Guest Log:     "pilotErrorDiag": "",
2025-02-25 08:38:34 (8127): Guest Log:  *** Listing of results directory ***
2025-02-25 08:38:34 (8127): Guest Log: total 328428
2025-02-25 08:38:34 (8127): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 25 05:28 pilot3.tar.gz
2025-02-25 08:38:34 (8127): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 25 05:50 runpilot2-wrapper.sh
2025-02-25 08:38:34 (8127): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 25 05:50 queuedata.json
2025-02-25 08:38:34 (8127): Guest Log: -rw-r--r--. 1 atlas atlas      9281 Feb 25 06:10 init_data.xml
2025-02-25 08:38:34 (8127): Guest Log: -rw-r--r--. 1 atlas atlas    503555 Feb 25 06:10 input.tar.gz
2025-02-25 08:38:34 (8127): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Feb 25 06:10 start_atlas.sh
2025-02-25 08:38:34 (8127): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 25 06:10 EVNT.43092757._002028.pool.root.1 -> /data/./ATLAS.root_0
2025-02-25 08:38:34 (8127): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Feb 25 06:10 pandaJob.out
2025-02-25 08:38:34 (8127): Guest Log: -rw-------. 1 atlas atlas       424 Feb 25 06:10 setup.sh.local
2025-02-25 08:38:34 (8127): Guest Log: -rw-------. 1 atlas atlas    988867 Feb 25 06:12 agis_schedconf.cvmfs.json
2025-02-25 08:38:34 (8127): Guest Log: drwx------. 4 atlas atlas      4096 Feb 25 06:12 pilot3
2025-02-25 08:38:34 (8127): Guest Log: -rw-------. 1 atlas atlas 326566723 Feb 25 13:36 HITS.43205094._040468.pool.root.1
2025-02-25 08:38:34 (8127): Guest Log: -rw-------. 1 atlas atlas        95 Feb 25 13:37 pilot_heartbeat.json
2025-02-25 08:38:34 (8127): Guest Log: -rw-------. 1 atlas atlas      1038 Feb 25 13:37 memory_monitor_summary.json
2025-02-25 08:38:34 (8127): Guest Log: -rw-------. 1 atlas atlas   1577983 Feb 25 13:37 agis_ddmendpoints.agis.ALL.json
2025-02-25 08:38:34 (8127): Guest Log: -rw-------. 1 atlas atlas    413113 Feb 25 13:37 log.43205094._040468.job.log.tgz.1
2025-02-25 08:38:34 (8127): Guest Log: -rw-------. 1 atlas atlas      7730 Feb 25 13:38 heartbeat.json
2025-02-25 08:38:34 (8127): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 25 13:38 pilotlog.txt
2025-02-25 08:38:34 (8127): Guest Log: -rw-------. 1 atlas atlas   2589258 Feb 25 13:38 log.43205094._040468.job.log.1
2025-02-25 08:38:34 (8127): Guest Log: -rw-------. 1 atlas atlas       357 Feb 25 13:38 output.list
2025-02-25 08:38:34 (8127): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 25 13:38 runtime_log
2025-02-25 08:38:34 (8127): Guest Log: -rw-------. 1 atlas atlas   3020800 Feb 25 13:38 result.tar.gz
2025-02-25 08:38:35 (8127): Guest Log: -rw-------. 1 atlas atlas       664 Feb 25 13:38 S7jNDmr0266nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmi2vKDmxzFNGn.diag
2025-02-25 08:38:35 (8127): Guest Log: -rw-r--r--. 1 atlas atlas     10944 Feb 25 13:38 runtime_log.err
2025-02-25 08:38:35 (8127): Guest Log: Looking for outputfile HITS.43205094._040468.pool.root.1
2025-02-25 08:38:35 (8127): Guest Log: HITS file was successfully produced
2025-02-25 08:38:35 (8127): Guest Log: -rw-------. 1 atlas atlas 326566723 Feb 25 13:36 /home/atlas/RunAtlas/HITS.43205094._040468.pool.root.1
2025-02-25 08:38:35 (8127): Guest Log: Successfully finished the ATLAS job!
2025-02-25 08:38:35 (8127): Guest Log: Copying the results back to the shared directory!
2025-02-25 08:38:35 (8127): Guest Log:  *** Contents of shared directory: ***
2025-02-25 08:38:35 (8127): Guest Log: total 336556
2025-02-25 08:38:35 (8127): Guest Log: -rw-r--r--. 1 root root 341070485 Feb 25 06:09 ATLAS.root_0
2025-02-25 08:38:35 (8127): Guest Log: -rw-r--r--. 1 root root      9281 Feb 25 06:09 init_data.xml
2025-02-25 08:38:35 (8127): Guest Log: -rw-r--r--. 1 root root    503555 Feb 25 06:09 input.tar.gz
2025-02-25 08:38:35 (8127): Guest Log: -rw-r--r--. 1 root root   3020800 Feb 25 13:38 result.tar.gz
2025-02-25 08:38:35 (8127): Guest Log: -rw-r--r--. 1 root root     17569 Feb 25 06:09 start_atlas.sh
2025-02-25 08:38:35 (8127): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-25 08:38:35 (8127): VM Completion File Detected.
2025-02-25 08:38:35 (8127): Powering off VM.
2025-02-25 08:38:36 (8127): Successfully stopped VM.
2025-02-25 08:38:36 (8127): Deregistering VM. (boinc_312f7950ad62d925, slot#2)
2025-02-25 08:38:36 (8127): Removing network bandwidth throttle group from VM.
2025-02-25 08:38:36 (8127): Removing VM from VirtualBox.
08:38:41 (8127): called boinc_finish(0)

</stderr_txt>
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