Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:25:16 (5022): wrapper (7.7.26015): starting
20:25:16 (5022): wrapper: running run_atlas (--nthreads 12)
[2025-02-24 20:25:16] Arguments: --nthreads 12
[2025-02-24 20:25:16] Threads: 12
[2025-02-24 20:25:16] Checking for CVMFS
[2025-02-24 20:25:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-24 20:25:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-24 20:25:19] Running cvmfs_config stat atlas.cern.ch
[2025-02-24 20:25:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-24 20:25:26] 2.11.2.0 2080 171746 101740 143022 2 98 17345783 18432000 4782 130560 0 24792492 99.210 52511073 39039 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-24 20:25:26] CVMFS is ok
[2025-02-24 20:25:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-24 20:25:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-24 20:25:26] Further information can be found at the LHC@home message board.
[2025-02-24 20:25:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-24 20:25:26] Checking for apptainer binary...
[2025-02-24 20:25:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-24 20:25:26] Running /usr/bin/apptainer --version
[2025-02-24 20:25:28] apptainer version 1.3.2-1.el7
[2025-02-24 20:25:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-24 20:26:00] c-206-5.aglt2.org
[2025-02-24 20:26:00] apptainer works
[2025-02-24 20:26:01] Set ATHENA_PROC_NUMBER=12
[2025-02-24 20:26:01] Set ATHENA_CORE_NUMBER=12
[2025-02-24 20:26:01] Starting ATLAS job with PandaID=6529419690
[2025-02-24 20:26:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 08:51:08]  *** The last 200 lines of the pilot log: ***
[2025-02-25 08:51:08] 2025-02-25 13:50:53,068 | INFO     | chi2: 9.387369448687195
[2025-02-25 08:51:08] 2025-02-25 13:50:53,069 | INFO     | current chi2=9.387369448687195 (change=32.54001896358288 %)
[2025-02-25 08:51:08] 2025-02-25 13:50:53,070 | INFO     | model: linear, x: [1740447921.0, 1740447982.0, 1740448043.0, 1740448105.0, 1740448165.0, 1740448226.0, 1740448288.0, 1740448350.0, 1740448409.0, 1740448470.0, 1740
[2025-02-25 08:51:08] 2025-02-25 13:50:53,070 | INFO     | sum of square deviations: 112861041738.4161
[2025-02-25 08:51:08] 2025-02-25 13:50:53,093 | INFO     | sum of deviations: 951676506782.2096
[2025-02-25 08:51:08] 2025-02-25 13:50:53,094 | INFO     | mean x: 1740469668.4243698
[2025-02-25 08:51:08] 2025-02-25 13:50:53,094 | INFO     | mean y: 2691479.0224089636
[2025-02-25 08:51:08] 2025-02-25 13:50:53,094 | INFO     | -- intersect: -14673445376.470522
[2025-02-25 08:51:08] 2025-02-25 13:50:53,094 | INFO     | intersect: -14673445376.470522
[2025-02-25 08:51:08] 2025-02-25 13:50:53,095 | INFO     | chi2: 6.739837518993292
[2025-02-25 08:51:08] 2025-02-25 13:50:53,095 | INFO     | current chi2=6.739837518993292 (change=28.203129153121324 %)
[2025-02-25 08:51:08] 2025-02-25 13:50:53,096 | INFO     | model: linear, x: [1740448226.0, 1740448288.0, 1740448350.0, 1740448409.0, 1740448470.0, 1740448532.0, 1740448592.0, 1740448653.0, 1740448715.0, 1740448777.0, 1740
[2025-02-25 08:51:08] 2025-02-25 13:50:53,096 | INFO     | sum of square deviations: 110506262974.4736
[2025-02-25 08:51:08] 2025-02-25 13:50:53,106 | INFO     | sum of deviations: 775249204580.9515
[2025-02-25 08:51:08] 2025-02-25 13:50:53,107 | INFO     | mean x: 1740469820.9294782
[2025-02-25 08:51:08] 2025-02-25 13:50:53,107 | INFO     | mean y: 2702903.5190409026
[2025-02-25 08:51:08] 2025-02-25 13:50:53,107 | INFO     | -- intersect: -12207445263.23609
[2025-02-25 08:51:08] 2025-02-25 13:50:53,107 | INFO     | intersect: -12207445263.23609
[2025-02-25 08:51:08] 2025-02-25 13:50:53,108 | INFO     | chi2: 4.99928916074431
[2025-02-25 08:51:08] 2025-02-25 13:50:53,108 | INFO     | current chi2=4.99928916074431 (change=25.824782175297333 %)
[2025-02-25 08:51:08] 2025-02-25 13:50:53,109 | INFO     | model: linear, x: [1740448532.0, 1740448592.0, 1740448653.0, 1740448715.0, 1740448777.0, 1740448836.0, 1740448897.0, 1740448958.0, 1740449019.0, 1740449080.0, 1740
[2025-02-25 08:51:08] 2025-02-25 13:50:53,109 | INFO     | sum of square deviations: 108184548314.72722
[2025-02-25 08:51:08] 2025-02-25 13:50:53,119 | INFO     | sum of deviations: 609113518341.728
[2025-02-25 08:51:08] 2025-02-25 13:50:53,119 | INFO     | mean x: 1740469973.4318182
[2025-02-25 08:51:08] 2025-02-25 13:50:53,119 | INFO     | mean y: 2713816.6193181816
[2025-02-25 08:51:08] 2025-02-25 13:50:53,119 | INFO     | -- intersect: -9796687351.106136
[2025-02-25 08:51:08] 2025-02-25 13:50:53,119 | INFO     | intersect: -9796687351.106136
[2025-02-25 08:51:08] 2025-02-25 13:50:53,120 | INFO     | chi2: 3.471697679299159
[2025-02-25 08:51:08] 2025-02-25 13:50:53,120 | INFO     | current chi2=3.471697679299159 (change=30.556173734461854 %)
[2025-02-25 08:51:08] 2025-02-25 13:50:53,121 | INFO     | model: linear, x: [1740448836.0, 1740448897.0, 1740448958.0, 1740449019.0, 1740449080.0, 1740449141.0, 1740449203.0, 1740449263.0, 1740449327.0, 1740449385.0, 1740
[2025-02-25 08:51:08] 2025-02-25 13:50:53,121 | INFO     | sum of square deviations: 105895620911.83994
[2025-02-25 08:51:08] 2025-02-25 13:50:53,131 | INFO     | sum of deviations: 480284752684.12537
[2025-02-25 08:51:08] 2025-02-25 13:50:53,131 | INFO     | mean x: 1740470125.9327612
[2025-02-25 08:51:08] 2025-02-25 13:50:53,131 | INFO     | mean y: 2722391.9814020027
[2025-02-25 08:51:08] 2025-02-25 13:50:53,131 | INFO     | -- intersect: -7891100381.706706
[2025-02-25 08:51:08] 2025-02-25 13:50:53,132 | INFO     | intersect: -7891100381.706706
[2025-02-25 08:51:08] 2025-02-25 13:50:53,132 | INFO     | chi2: 2.5246418609512573
[2025-02-25 08:51:08] 2025-02-25 13:50:53,133 | INFO     | current chi2=2.5246418609512573 (change=27.279328611905125 %)
[2025-02-25 08:51:08] 2025-02-25 13:50:53,133 | INFO     | model: linear, x: [1740449141.0, 1740449203.0, 1740449263.0, 1740449327.0, 1740449385.0, 1740449446.0, 1740449509.0, 1740449569.0, 1740449630.0, 1740449692.0, 1740
[2025-02-25 08:51:08] 2025-02-25 13:50:53,134 | INFO     | sum of square deviations: 103639035554.958
[2025-02-25 08:51:08] 2025-02-25 13:50:53,143 | INFO     | sum of deviations: 405017916058.85095
[2025-02-25 08:51:08] 2025-02-25 13:50:53,143 | INFO     | mean x: 1740470278.4394813
[2025-02-25 08:51:08] 2025-02-25 13:50:53,143 | INFO     | mean y: 2727476.698847262
[2025-02-25 08:51:08] 2025-02-25 13:50:53,144 | INFO     | -- intersect: -6798972687.349081
[2025-02-25 08:51:08] 2025-02-25 13:50:53,144 | INFO     | intersect: -6798972687.349081
[2025-02-25 08:51:08] 2025-02-25 13:50:53,144 | INFO     | chi2: 2.2496132583048847
[2025-02-25 08:51:08] 2025-02-25 13:50:53,145 | INFO     | current chi2=2.2496132583048847 (change=10.893767028910187 %)
[2025-02-25 08:51:08] 2025-02-25 13:50:53,145 | INFO     | left removable region: 60
[2025-02-25 08:51:08] 2025-02-25 13:50:53,145 | INFO     | model: linear, x: [1740450971.0, 1740451035.0, 1740451094.0, 1740451157.0, 1740451216.0, 1740451278.0, 1740451338.0, 1740451399.0, 1740451469.0, 1740451520.0, 1740
[2025-02-25 08:51:08] 2025-02-25 13:50:53,146 | INFO     | sum of square deviations: 88332138066.30658
[2025-02-25 08:51:08] 2025-02-25 13:50:53,155 | INFO     | sum of deviations: 266249782064.37415
[2025-02-25 08:51:08] 2025-02-25 13:50:53,155 | INFO     | mean x: 1740471010.4422493
[2025-02-25 08:51:08] 2025-02-25 13:50:53,155 | INFO     | mean y: 2751184.7203647415
[2025-02-25 08:51:08] 2025-02-25 13:50:53,155 | INFO     | -- intersect: -5243357846.080615
[2025-02-25 08:51:08] 2025-02-25 13:50:53,155 | INFO     | intersect: -5243357846.080615
[2025-02-25 08:51:08] 2025-02-25 13:50:53,156 | INFO     | chi2: 0.035081572244742044
[2025-02-25 08:51:08] 2025-02-25 13:50:53,156 | INFO     | -- intersect: -5243357846.080615
[2025-02-25 08:51:08] 2025-02-25 13:50:53,156 | INFO     | current memory leak: 3.01 B/s (using 658 data points, chi2=0.04)
[2025-02-25 08:51:08] 2025-02-25 13:50:53,157 | INFO     | ..............................
[2025-02-25 08:51:08] 2025-02-25 13:50:53,157 | INFO     | . Timing measurements:
[2025-02-25 08:51:08] 2025-02-25 13:50:53,157 | INFO     | . get job = 0 s
[2025-02-25 08:51:08] 2025-02-25 13:50:53,157 | INFO     | . initial setup = 18 s
[2025-02-25 08:51:08] 2025-02-25 13:50:53,157 | INFO     | . payload setup = 117 s
[2025-02-25 08:51:08] 2025-02-25 13:50:53,157 | INFO     | . stage-in = 0 s
[2025-02-25 08:51:08] 2025-02-25 13:50:53,158 | INFO     | . payload execution = 44235 s
[2025-02-25 08:51:08] 2025-02-25 13:50:53,158 | INFO     | . stage-out = 8 s
[2025-02-25 08:51:08] 2025-02-25 13:50:53,158 | INFO     | . log creation = 0 s
[2025-02-25 08:51:08] 2025-02-25 13:50:53,158 | INFO     | ..............................
[2025-02-25 08:51:08] 2025-02-25 13:50:53,295 | INFO     | 
[2025-02-25 08:51:08] 2025-02-25 13:50:53,354 | INFO     | job summary report
[2025-02-25 08:51:08] 2025-02-25 13:50:53,354 | INFO     | --------------------------------------------------
[2025-02-25 08:51:08] 2025-02-25 13:50:53,354 | INFO     | PanDA job id: 6529419690
[2025-02-25 08:51:08] 2025-02-25 13:50:53,354 | INFO     | task id: 43078919
[2025-02-25 08:51:08] 2025-02-25 13:50:53,354 | INFO     | errors: (none)
[2025-02-25 08:51:08] 2025-02-25 13:50:53,355 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 08:51:08] 2025-02-25 13:50:53,355 | INFO     | pilot state: finished 
[2025-02-25 08:51:08] 2025-02-25 13:50:53,355 | INFO     | transexitcode: 0
[2025-02-25 08:51:08] 2025-02-25 13:50:53,355 | INFO     | exeerrorcode: 0
[2025-02-25 08:51:08] 2025-02-25 13:50:53,355 | INFO     | exeerrordiag: 
[2025-02-25 08:51:08] 2025-02-25 13:50:53,355 | INFO     | exitcode: 0
[2025-02-25 08:51:08] 2025-02-25 13:50:53,355 | INFO     | exitmsg: OK
[2025-02-25 08:51:08] 2025-02-25 13:50:53,355 | INFO     | cpuconsumptiontime: 163100 s
[2025-02-25 08:51:08] 2025-02-25 13:50:53,355 | INFO     | nevents: 400
[2025-02-25 08:51:08] 2025-02-25 13:50:53,355 | INFO     | neventsw: 0
[2025-02-25 08:51:08] 2025-02-25 13:50:53,356 | INFO     | pid: 28773
[2025-02-25 08:51:08] 2025-02-25 13:50:53,356 | INFO     | pgrp: 28773
[2025-02-25 08:51:08] 2025-02-25 13:50:53,356 | INFO     | corecount: 12
[2025-02-25 08:51:08] 2025-02-25 13:50:53,356 | INFO     | event service: False
[2025-02-25 08:51:08] 2025-02-25 13:50:53,356 | INFO     | sizes: {0: 2382511, 3: 2383112, 4: 2383196, 5: 2383252, 6: 2383451, 18: 2383451, 29: 2383607, 40: 2383635, 51: 2383663, 62: 2383691, 71: 2383925, 74: 2384233, 4435
[2025-02-25 08:51:08] 2025-02-25 13:50:53,356 | INFO     | --------------------------------------------------
[2025-02-25 08:51:08] 2025-02-25 13:50:53,356 | INFO     | 
[2025-02-25 08:51:08] 2025-02-25 13:50:53,356 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 08:51:08] 2025-02-25 13:50:53,401 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 08:51:08] 2025-02-25 13:50:53,401 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 08:51:08] 2025-02-25 13:50:53,401 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 08:51:08] 2025-02-25 13:50:53,401 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 08:51:08] 2025-02-25 13:50:53,402 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 08:51:08] 2025-02-25 13:50:53,402 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 08:51:08] 2025-02-25 13:50:53,402 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 08:51:08] 2025-02-25 13:50:53,402 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 08:51:08] 2025-02-25 13:50:53,402 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 08:51:08] 2025-02-25 13:50:53,402 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 08:51:08] 2025-02-25 13:50:53,402 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 08:51:08] 2025-02-25 13:50:53,402 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 08:51:08] 2025-02-25 13:50:53,403 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 08:51:08] 2025-02-25 13:50:53,403 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 08:51:08] 2025-02-25 13:50:53,403 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 08:51:08] 2025-02-25 13:50:53,403 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 08:51:08] 2025-02-25 13:50:53,403 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 08:51:08] 2025-02-25 13:50:53,403 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 08:51:08] 2025-02-25 13:50:53,403 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 08:51:08] 2025-02-25 13:50:53,403 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 08:51:08] 2025-02-25 13:50:53,403 | INFO     | job 6529419690 has completed (purged errors)
[2025-02-25 08:51:08] 2025-02-25 13:50:53,404 | INFO     | overall cleanup function is called
[2025-02-25 08:51:08] 2025-02-25 13:50:54,409 | INFO     | --- collectZombieJob: --- 10, [28773]
[2025-02-25 08:51:08] 2025-02-25 13:50:54,409 | INFO     | zombie collector waiting for pid 28773
[2025-02-25 08:51:08] 2025-02-25 13:50:54,409 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 08:51:08] 2025-02-25 13:50:54,409 | INFO     | collected zombie processes
[2025-02-25 08:51:08] 2025-02-25 13:50:54,409 | INFO     | will attempt to kill all subprocesses of pid=28773
[2025-02-25 08:51:08] 2025-02-25 13:50:54,635 | INFO     | process IDs to be killed: [28773] (in reverse order)
[2025-02-25 08:51:08] 2025-02-25 13:50:54,718 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 08:51:08] 2025-02-25 13:50:54,719 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 08:51:08] 2025-02-25 13:50:54,724 | INFO     | did not find any defunct processes belonging to 28773
[2025-02-25 08:51:08] 2025-02-25 13:50:54,731 | INFO     | did not find any defunct processes belonging to 28773
[2025-02-25 08:51:08] 2025-02-25 13:50:54,732 | INFO     | ready for new job
[2025-02-25 08:51:08] 2025-02-25 13:50:54,732 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 08:51:08] 2025-02-25 13:50:54,753 | INFO     | **************************************
[2025-02-25 08:51:08] 2025-02-25 13:50:54,754 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 08:51:08] 2025-02-25 13:50:54,754 | INFO     | **************************************
[2025-02-25 08:51:08] 2025-02-25 13:50:54,754 | INFO     | 
[2025-02-25 08:51:08] 2025-02-25 13:50:54,755 | INFO     | architecture information:
[2025-02-25 08:51:08] 2025-02-25 13:50:54,756 | INFO     | executing command: cat /etc/os-release
[2025-02-25 08:51:08] 2025-02-25 13:50:54,781 | INFO     | cat /etc/os-release:
[2025-02-25 08:51:08] NAME="CentOS Linux"
[2025-02-25 08:51:08] VERSION="7 (Core)"
[2025-02-25 08:51:08] ID="centos"
[2025-02-25 08:51:08] ID_LIKE="rhel fedora"
[2025-02-25 08:51:08] VERSION_ID="7"
[2025-02-25 08:51:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 08:51:08] ANSI_COLOR="0;31"
[2025-02-25 08:51:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 08:51:08] HOME_URL="https://www.centos.org/"
[2025-02-25 08:51:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 08:51:08] 
[2025-02-25 08:51:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 08:51:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 08:51:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 08:51:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 08:51:08] 
[2025-02-25 08:51:08] 2025-02-25 13:50:54,781 | INFO     | **************************************
[2025-02-25 08:51:08] 2025-02-25 13:50:55,285 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 08:51:08] 2025-02-25 13:50:55,304 | INFO     | sufficient remaining disk space (28848422912 B)
[2025-02-25 08:51:08] 2025-02-25 13:50:55,305 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 08:51:08] 2025-02-25 13:50:55,305 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 08:51:08] 2025-02-25 13:50:55,306 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 08:51:08] 2025-02-25 13:50:55,439 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-25 08:51:08] 2025-02-25 13:50:55,439 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-25 08:51:08] 2025-02-25 13:50:55,439 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 08:51:08] 2025-02-25 13:50:55,440 | INFO     | will abort loop
[2025-02-25 08:51:08] 2025-02-25 13:50:55,537 | INFO     | all job control threads have been joined
[2025-02-25 08:51:08] 2025-02-25 13:50:56,106 | INFO     | all data control threads have been joined
[2025-02-25 08:51:08] 2025-02-25 13:50:56,163 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 08:51:08] 2025-02-25 13:50:56,163 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 08:51:08] 2025-02-25 13:50:56,163 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 08:51:08] 2025-02-25 13:50:56,311 | INFO     | [job] retrieve thread has finished
[2025-02-25 08:51:08] 2025-02-25 13:50:56,312 | INFO     | all payload control threads have been joined
[2025-02-25 08:51:08] 2025-02-25 13:50:56,440 | INFO     | [job] job monitor thread has finished
[2025-02-25 08:51:08] 2025-02-25 13:50:56,542 | INFO     | [job] control thread has finished
[2025-02-25 08:51:08] 2025-02-25 13:50:56,853 | INFO     | [payload] validate_post thread has finished
[2025-02-25 08:51:08] 2025-02-25 13:50:56,853 | INFO     | [payload] failed_post thread has finished
[2025-02-25 08:51:08] 2025-02-25 13:50:56,915 | INFO     | [data] copytool_in thread has finished
[2025-02-25 08:51:08] 2025-02-25 13:50:57,002 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 08:51:08] 2025-02-25 13:50:57,111 | INFO     | [data] control thread has finished
[2025-02-25 08:51:08] 2025-02-25 13:50:57,312 | INFO     | [data] copytool_out thread has finished
[2025-02-25 08:51:08] 2025-02-25 13:50:57,317 | INFO     | [payload] control thread has finished
[2025-02-25 08:51:08] 2025-02-25 13:50:57,431 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 08:51:08] 2025-02-25 13:50:57,436 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 08:51:08] 2025-02-25 13:50:57,445 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 08:51:08] 2025-02-25 13:50:57,449 | INFO     | [job] validate thread has finished
[2025-02-25 08:51:08] 2025-02-25 13:50:57,455 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 08:51:08] 2025-02-25 13:50:58,307 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 08:51:08] 2025-02-25 13:50:59,308 | INFO     | [job] queue monitor thread has finished
[2025-02-25 08:51:08] 2025-02-25 13:51:01,007 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 08:51:08] 2025-02-25 13:51:01,590 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140040920827712)>', '<ExcThread(monitor, started 140039866533632)>']
[2025-02-25 08:51:08] 2025-02-25 13:51:02,192 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 08:51:08] 2025-02-25 13:51:02,192 | INFO     | [monitor] control thread has ended
[2025-02-25 08:51:08] 2025-02-25 13:51:06,620 | INFO     | all workflow threads have been joined
[2025-02-25 08:51:08] 2025-02-25 13:51:06,621 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 08:51:08] 2025-02-25 13:51:06,632 | INFO     | traces error code: 0
[2025-02-25 08:51:08] 2025-02-25 13:51:06,632 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 08:51:08] 2025-02-25 13:51:07,353 [wrapper] ==== pilot stdout END ====
[2025-02-25 08:51:08] 2025-02-25 13:51:07,356 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 08:51:08] 2025-02-25 13:51:07,359 [wrapper] pilotpid: 11980
[2025-02-25 08:51:08] 2025-02-25 13:51:07,363 [wrapper] Pilot exit status: 0
[2025-02-25 08:51:08] 2025-02-25 13:51:07,399 [wrapper] pandaids: 6529419690
[2025-02-25 08:51:08] 2025-02-25 13:51:07,451 [wrapper] cleanup supervisor_pilot  4479 11981
[2025-02-25 08:51:08] 2025-02-25 13:51:07,454 [wrapper] Test setup, not cleaning
[2025-02-25 08:51:08] 2025-02-25 13:51:07,462 [wrapper] apfmon messages muted
[2025-02-25 08:51:08] 2025-02-25 13:51:07,466 [wrapper] ==== wrapper stdout END ====
[2025-02-25 08:51:08] 2025-02-25 13:51:07,470 [wrapper] ==== wrapper stderr END ====
[2025-02-25 08:51:08]  *** Error codes and diagnostics ***
[2025-02-25 08:51:08]     "exeErrorCode": 0,
[2025-02-25 08:51:08]     "exeErrorDiag": "",
[2025-02-25 08:51:08]     "pilotErrorCode": 0,
[2025-02-25 08:51:08]     "pilotErrorDiag": "",
[2025-02-25 08:51:08]  *** Listing of results directory ***
[2025-02-25 08:51:08] total 668392
[2025-02-25 08:51:08] -rw-r--r-- 1 boincer umatlas    491065 Feb 24 19:40 pilot3.tar.gz
[2025-02-25 08:51:08] -rwx------ 1 boincer umatlas     35865 Feb 24 20:24 runpilot2-wrapper.sh
[2025-02-25 08:51:08] -rw-r--r-- 1 boincer umatlas      5118 Feb 24 20:24 queuedata.json
[2025-02-25 08:51:08] -rw-r--r-- 1 boincer umatlas       100 Feb 24 20:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 08:51:08] -rwxr-xr-x 1 boincer umatlas      7986 Feb 24 20:25 run_atlas
[2025-02-25 08:51:08] -rw-r--r-- 1 boincer umatlas       105 Feb 24 20:25 job.xml
[2025-02-25 08:51:08] -rw-r--r-- 2 boincer umatlas 341604672 Feb 24 20:25 EVNT.43078917._001692.pool.root.1
[2025-02-25 08:51:08] drwxrwx--x 2 boincer umatlas      4096 Feb 24 20:25 shared
[2025-02-25 08:51:08] -rw-r--r-- 2 boincer umatlas    503560 Feb 24 20:25 input.tar.gz
[2025-02-25 08:51:08] -rw-r--r-- 2 boincer umatlas     17569 Feb 24 20:25 start_atlas.sh
[2025-02-25 08:51:08] -rw-r--r-- 1 boincer umatlas         0 Feb 24 20:25 boinc_lockfile
[2025-02-25 08:51:08] -rw-r--r-- 1 boincer umatlas      2547 Feb 24 20:26 pandaJob.out
[2025-02-25 08:51:08] -rw------- 1 boincer umatlas       467 Feb 24 20:26 setup.sh.local
[2025-02-25 08:51:08] -rw------- 1 boincer umatlas    988867 Feb 24 20:28 agis_schedconf.cvmfs.json
[2025-02-25 08:51:08] drwx------ 4 boincer umatlas      4096 Feb 24 20:28 pilot3
[2025-02-25 08:51:08] -rw------- 1 boincer umatlas 326023740 Feb 25 08:46 HITS.43078919._092623.pool.root.1
[2025-02-25 08:51:08] -rw-r--r-- 1 boincer umatlas      5952 Feb 25 08:47 init_data.xml
[2025-02-25 08:51:08] -rw-r--r-- 1 boincer umatlas       533 Feb 25 08:48 boinc_task_state.xml
[2025-02-25 08:51:08] -rw------- 1 boincer umatlas      1073 Feb 25 08:50 memory_monitor_summary.json
[2025-02-25 08:51:08] -rw------- 1 boincer umatlas   1577983 Feb 25 08:50 agis_ddmendpoints.agis.ALL.json
[2025-02-25 08:51:08] -rw------- 1 boincer umatlas    833003 Feb 25 08:50 log.43078919._092623.job.log.tgz.1
[2025-02-25 08:51:08] -rw------- 1 boincer umatlas        95 Feb 25 08:50 pilot_heartbeat.json
[2025-02-25 08:51:08] -rw------- 1 boincer umatlas      7819 Feb 25 08:50 heartbeat.json
[2025-02-25 08:51:08] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 08:50 boinc_mmap_file
[2025-02-25 08:51:08] -rw-r--r-- 1 boincer umatlas        29 Feb 25 08:50 wrapper_checkpoint.txt
[2025-02-25 08:51:08] -rw------- 1 boincer umatlas      4401 Feb 25 08:51 pilotlog.txt
[2025-02-25 08:51:08] -rw------- 1 boincer umatlas   5667914 Feb 25 08:51 log.43078919._092623.job.log.1
[2025-02-25 08:51:08] -rw------- 1 boincer umatlas       357 Feb 25 08:51 output.list
[2025-02-25 08:51:08] -rw-r--r-- 1 boincer umatlas       620 Feb 25 08:51 runtime_log
[2025-02-25 08:51:08] -rw------- 1 boincer umatlas   6522880 Feb 25 08:51 result.tar.gz
[2025-02-25 08:51:08] -rw-r--r-- 1 boincer umatlas     11416 Feb 25 08:51 runtime_log.err
[2025-02-25 08:51:08] -rw------- 1 boincer umatlas       666 Feb 25 08:51 gLCNDmLry66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmJ2vKDmDBCvXo.diag
[2025-02-25 08:51:08] -rw-r--r-- 1 boincer umatlas     21691 Feb 25 08:51 stderr.txt
[2025-02-25 08:51:08] HITS file was successfully produced:
[2025-02-25 08:51:08] -rw------- 1 boincer umatlas 326023740 Feb 25 08:46 shared/HITS.pool.root.1
[2025-02-25 08:51:08]  *** Contents of shared directory: ***
[2025-02-25 08:51:08] total 658872
[2025-02-25 08:51:08] -rw-r--r-- 2 boincer umatlas 341604672 Feb 24 20:25 ATLAS.root_0
[2025-02-25 08:51:08] -rw-r--r-- 2 boincer umatlas    503560 Feb 24 20:25 input.tar.gz
[2025-02-25 08:51:08] -rw-r--r-- 2 boincer umatlas     17569 Feb 24 20:25 start_atlas.sh
[2025-02-25 08:51:08] -rw------- 1 boincer umatlas 326023740 Feb 25 08:46 HITS.pool.root.1
[2025-02-25 08:51:08] -rw------- 1 boincer umatlas   6522880 Feb 25 08:51 result.tar.gz
08:51:10 (5022): run_atlas exited; CPU time 162804.707206
08:51:10 (5022): called boinc_finish(0)

</stderr_txt>
]]>

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