Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-23 23:53:47 (71688): Detected: vboxwrapper 26206
2025-02-23 23:53:47 (71688): Detected: BOINC client v8.0.2
2025-02-23 23:53:49 (71688): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2025-02-23 23:53:49 (71688): Successfully copied 'init_data.xml' to the shared directory.
2025-02-23 23:53:49 (71688): Create VM. (boinc_54dc259cfd646b25, slot#2)
2025-02-23 23:53:50 (71688): Setting Memory Size for VM. (8000MB)
2025-02-23 23:53:50 (71688): Setting CPU Count for VM. (5)
2025-02-23 23:53:51 (71688): Setting Chipset Options for VM.
2025-02-23 23:53:51 (71688): Setting Graphics Controller Options for VM.
2025-02-23 23:53:51 (71688): Setting Boot Options for VM.
2025-02-23 23:53:51 (71688): Setting Network Configuration for NAT.
2025-02-23 23:53:52 (71688): Enabling VM Network Access.
2025-02-23 23:53:52 (71688): Disabling USB Support for VM.
2025-02-23 23:53:52 (71688): Disabling COM Port Support for VM.
2025-02-23 23:53:52 (71688): Disabling LPT Port Support for VM.
2025-02-23 23:53:53 (71688): Disabling Audio Support for VM.
2025-02-23 23:53:53 (71688): Disabling Clipboard Support for VM.
2025-02-23 23:53:53 (71688): Disabling Drag and Drop Support for VM.
2025-02-23 23:53:54 (71688): Adding storage controller(s) to VM.
2025-02-23 23:53:54 (71688): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-23 23:53:57 (71688): Adding VirtualBox Guest Additions to VM.
2025-02-23 23:53:57 (71688): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-23 23:53:58 (71688): forwarding host port 59833 to guest port 80
2025-02-23 23:53:58 (71688): Enabling remote desktop for VM.
2025-02-23 23:53:58 (71688): Enabling shared directory for VM.
2025-02-23 23:53:59 (71688): Starting VM using VBoxManage interface. (boinc_54dc259cfd646b25, slot#2)
2025-02-23 23:54:07 (71688): Successfully started VM. (PID = '71916')
2025-02-23 23:54:07 (71688): Reporting VM Process ID to BOINC.
2025-02-23 23:54:07 (71688): Guest Log: BIOS: VirtualBox 7.0.14
2025-02-23 23:54:07 (71688): Guest Log: CPUID EDX: 0x178bfbff
2025-02-23 23:54:07 (71688): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-23 23:54:07 (71688): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-23 23:54:07 (71688): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-23 23:54:07 (71688): Detected: Web Application Enabled (http://localhost:59833)
2025-02-23 23:54:07 (71688): Detected: Remote Desktop Enabled (localhost:59835)
2025-02-23 23:54:07 (71688): Preference change detected
2025-02-23 23:54:07 (71688): Setting CPU throttle for VM. (100%)
2025-02-23 23:54:07 (71688): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-23 23:54:09 (71688): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-23 23:54:09 (71688): Guest Log: BIOS: Booting from Hard Disk...
2025-02-23 23:54:12 (71688): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-23 23:54:12 (71688): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-23 23:54:12 (71688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-23 23:54:22 (71688): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-23 23:54:22 (71688): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-23 23:55:03 (71688): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-23 23:55:03 (71688): Guest Log: 00:00:00.000124 main     Log opened 2025-02-23T23:55:01.862410000Z
2025-02-23 23:55:03 (71688): Guest Log: 00:00:00.000259 main     OS Product: Linux
2025-02-23 23:55:03 (71688): Guest Log: 00:00:00.000299 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-23 23:55:03 (71688): Guest Log: 00:00:00.000322 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-23 23:55:03 (71688): Guest Log: 00:00:00.000350 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-23 23:55:03 (71688): Guest Log: 00:00:00.000351 main     Process ID: 1431
2025-02-23 23:55:03 (71688): Guest Log: 00:00:00.000351 main     Package type: LINUX_64BITS_GENERIC
2025-02-23 23:55:03 (71688): Guest Log: 00:00:00.001091 main     5.2.32 r132073 started. Verbose level = 0
2025-02-23 23:55:04 (71688): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-23 23:55:04 (71688): Guest Log: [INFO] Mounting shared directory
2025-02-23 23:55:04 (71688): Guest Log: [INFO] Checking for init_data.xml
2025-02-23 23:55:13 (71688): Guest Log: 00:00:10.003560 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 339 117 000ns (GuestNow=1 740 383 713 204 462 000 ns GuestLast=1 740 354 901 865 345 000 ns fSetTimeLastLoop=true )
2025-02-23 23:55:31 (71688): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-23 23:55:31 (71688): Guest Log: [INFO] Detected branch: prod
2025-02-23 23:55:31 (71688): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-23 23:55:31 (71688): Guest Log: Copying input files
2025-02-23 23:55:33 (71688): Guest Log: Copied input files into RunAtlas.
2025-02-23 23:55:33 (71688): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-23 23:55:33 (71688): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-23 23:55:33 (71688): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-23 23:55:33 (71688): Guest Log: Further information can be found at the LHC@home message board.
2025-02-23 23:55:43 (71688): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-23 23:55:43 (71688): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-23 23:55:43 (71688): Guest Log: 2.6.3.0 1726 0 30148 143003 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-23 23:55:47 (71688): Guest Log: copied the webapp to /var/www
2025-02-23 23:55:47 (71688): Guest Log: ATHENA_PROC_NUMBER=5
2025-02-23 23:55:47 (71688): Guest Log: ATHENA_CORE_NUMBER=5
2025-02-23 23:55:48 (71688): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-23 23:55:48 (71688): Guest Log:  *** Starting ATLAS job. (PandaID=6526600131 taskID=43205094) ***
2025-02-24 01:35:54 (71688): Status Report: Elapsed Time: '6000.000000'
2025-02-24 01:35:54 (71688): Status Report: CPU Time: '20909.828125'
2025-02-24 03:18:51 (71688): Status Report: Elapsed Time: '12000.980560'
2025-02-24 03:18:51 (71688): Status Report: CPU Time: '51452.546875'
2025-02-24 03:41:10 (71688): Guest Log:  *** Job finished ***
2025-02-24 03:41:10 (71688): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-24 03:41:10 (71688): Guest Log: 2025-02-24 11:40:59,605 | INFO     | [payload] failed_post thread has finished
2025-02-24 03:41:10 (71688): Guest Log: 2025-02-24 11:40:59,791 | INFO     | [payload] run_realtimelog thread has finished
2025-02-24 03:41:10 (71688): Guest Log: 2025-02-24 11:41:01,950 | INFO     | [data] queue_monitor thread has finished
2025-02-24 03:41:10 (71688): Guest Log: 2025-02-24 11:41:02,522 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140075239003968)>', '<ExcThread(monitor, started 140074402420480)>']
2025-02-24 03:41:10 (71688): Guest Log: 2025-02-24 11:41:03,373 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-24 03:41:10 (71688): Guest Log: 2025-02-24 11:41:03,373 | INFO     | [monitor] control thread has ended
2025-02-24 03:41:10 (71688): Guest Log: 2025-02-24 11:41:07,528 | INFO     | all workflow threads have been joined
2025-02-24 03:41:10 (71688): Guest Log: 2025-02-24 11:41:07,528 | INFO     | end of generic workflow (traces error code: 0)
2025-02-24 03:41:10 (71688): Guest Log: 2025-02-24 11:41:07,528 | INFO     | traces error code: 0
2025-02-24 03:41:10 (71688): Guest Log: 2025-02-24 11:41:07,528 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-24 03:41:10 (71688): Guest Log: 2025-02-24 11:41:07,626 [wrapper] ==== pilot stdout END ====
2025-02-24 03:41:10 (71688): Guest Log: 2025-02-24 11:41:07,630 [wrapper] ==== wrapper stdout RESUME ====
2025-02-24 03:41:10 (71688): Guest Log: 2025-02-24 11:41:07,634 [wrapper] pilotpid: 6121
2025-02-24 03:41:10 (71688): Guest Log: 2025-02-24 11:41:07,637 [wrapper] Pilot exit status: 0
2025-02-24 03:41:10 (71688): Guest Log: 2025-02-24 11:41:08,708 [wrapper] pandaids: 6526600131
2025-02-24 03:41:10 (71688): Guest Log: 2025-02-24 11:41:08,742 [wrapper] cleanup supervisor_pilot 15373 6122
2025-02-24 03:41:10 (71688): Guest Log: 2025-02-24 11:41:08,749 [wrapper] Test setup, not cleaning
2025-02-24 03:41:10 (71688): Guest Log: 2025-02-24 11:41:08,759 [wrapper] apfmon messages muted
2025-02-24 03:41:10 (71688): Guest Log: 2025-02-24 11:41:08,763 [wrapper] ==== wrapper stdout END ====
2025-02-24 03:41:10 (71688): Guest Log: 2025-02-24 11:41:08,768 [wrapper] ==== wrapper stderr END ====
2025-02-24 03:41:10 (71688): Guest Log:  *** Error codes and diagnostics ***
2025-02-24 03:41:10 (71688): Guest Log:     "exeErrorCode": 0,
2025-02-24 03:41:10 (71688): Guest Log:     "exeErrorDiag": "",
2025-02-24 03:41:10 (71688): Guest Log:     "pilotErrorCode": 0,
2025-02-24 03:41:10 (71688): Guest Log:     "pilotErrorDiag": "",
2025-02-24 03:41:10 (71688): Guest Log:  *** Listing of results directory ***
2025-02-24 03:41:10 (71688): Guest Log: total 325320
2025-02-24 03:41:10 (71688): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 23 16:08 pilot3.tar.gz
2025-02-24 03:41:10 (71688): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 23 16:13 runpilot2-wrapper.sh
2025-02-24 03:41:10 (71688): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 23 16:13 queuedata.json
2025-02-24 03:41:10 (71688): Guest Log: -rwxr-xr-x. 1 atlas atlas      9394 Feb 24 07:55 init_data.xml
2025-02-24 03:41:10 (71688): Guest Log: -rwxr-xr-x. 1 atlas atlas    503556 Feb 24 07:55 input.tar.gz
2025-02-24 03:41:10 (71688): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 24 07:55 start_atlas.sh
2025-02-24 03:41:10 (71688): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 24 07:55 EVNT.43092757._001589.pool.root.1 -> /data/./ATLAS.root_0
2025-02-24 03:41:10 (71688): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Feb 24 07:55 pandaJob.out
2025-02-24 03:41:10 (71688): Guest Log: -rw-------. 1 atlas atlas       424 Feb 24 07:57 setup.sh.local
2025-02-24 03:41:10 (71688): Guest Log: -rw-------. 1 atlas atlas    987720 Feb 24 08:01 agis_schedconf.cvmfs.json
2025-02-24 03:41:10 (71688): Guest Log: drwx------. 4 atlas atlas      4096 Feb 24 08:01 pilot3
2025-02-24 03:41:10 (71688): Guest Log: -rw-------. 1 atlas atlas 326395352 Feb 24 11:40 HITS.43205094._039779.pool.root.1
2025-02-24 03:41:10 (71688): Guest Log: -rw-------. 1 atlas atlas      1039 Feb 24 11:40 memory_monitor_summary.json
2025-02-24 03:41:10 (71688): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 24 11:40 agis_ddmendpoints.agis.ALL.json
2025-02-24 03:41:10 (71688): Guest Log: -rw-------. 1 atlas atlas    342135 Feb 24 11:40 log.43205094._039779.job.log.tgz.1
2025-02-24 03:41:10 (71688): Guest Log: -rw-------. 1 atlas atlas      7766 Feb 24 11:40 heartbeat.json
2025-02-24 03:41:10 (71688): Guest Log: -rw-------. 1 atlas atlas        95 Feb 24 11:40 pilot_heartbeat.json
2025-02-24 03:41:10 (71688): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 24 11:41 pilotlog.txt
2025-02-24 03:41:10 (71688): Guest Log: -rw-------. 1 atlas atlas   1157951 Feb 24 11:41 log.43205094._039779.job.log.1
2025-02-24 03:41:10 (71688): Guest Log: -rw-------. 1 atlas atlas       357 Feb 24 11:41 output.list
2025-02-24 03:41:10 (71688): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 24 11:41 runtime_log
2025-02-24 03:41:10 (71688): Guest Log: -rw-------. 1 atlas atlas   1515520 Feb 24 11:41 result.tar.gz
2025-02-24 03:41:10 (71688): Guest Log: -rw-r--r--. 1 atlas atlas     10945 Feb 24 11:41 runtime_log.err
2025-02-24 03:41:10 (71688): Guest Log: -rw-------. 1 atlas atlas       659 Feb 24 11:41 bflLDmamT66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmgivKDmx0jysm.diag
2025-02-24 03:41:10 (71688): Guest Log: Looking for outputfile HITS.43205094._039779.pool.root.1
2025-02-24 03:41:10 (71688): Guest Log: HITS file was successfully produced
2025-02-24 03:41:10 (71688): Guest Log: -rw-------. 1 atlas atlas 326395352 Feb 24 11:40 /home/atlas/RunAtlas/HITS.43205094._039779.pool.root.1
2025-02-24 03:41:11 (71688): Guest Log: Successfully finished the ATLAS job!
2025-02-24 03:41:11 (71688): Guest Log: Copying the results back to the shared directory!
2025-02-24 03:41:11 (71688): Guest Log:  *** Contents of shared directory: ***
2025-02-24 03:41:11 (71688): Guest Log: total 659096
2025-02-24 03:41:11 (71688): Guest Log: -rwxrwxrwx. 1 root root 346462834 Feb 24 07:53 ATLAS.root_0
2025-02-24 03:41:11 (71688): Guest Log: -rwxrwxrwx. 1 root root 326395352 Feb 24 11:41 HITS.pool.root.1
2025-02-24 03:41:11 (71688): Guest Log: -rwxrwxrwx. 1 root root      9394 Feb 24 07:53 init_data.xml
2025-02-24 03:41:11 (71688): Guest Log: -rwxrwxrwx. 1 root root    503556 Feb 24 02:05 input.tar.gz
2025-02-24 03:41:11 (71688): Guest Log: -rwxrwxrwx. 1 root root   1515520 Feb 24 11:41 result.tar.gz
2025-02-24 03:41:11 (71688): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 24 02:05 start_atlas.sh
2025-02-24 03:41:11 (71688): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-24 03:41:11 (71688): VM Completion File Detected.
2025-02-24 03:41:11 (71688): Powering off VM.
2025-02-24 03:41:13 (71688): Successfully stopped VM.
2025-02-24 03:41:13 (71688): Deregistering VM. (boinc_54dc259cfd646b25, slot#2)
2025-02-24 03:41:13 (71688): Removing network bandwidth throttle group from VM.
2025-02-24 03:41:13 (71688): Removing VM from VirtualBox.
03:41:19 (71688): called boinc_finish(0)

</stderr_txt>
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