Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:23:02 (353786): wrapper (7.7.26015): starting
19:23:02 (353786): wrapper: running run_atlas (--nthreads 4)
[2025-02-26 19:23:02] Arguments: --nthreads 4
[2025-02-26 19:23:02] Threads: 4
[2025-02-26 19:23:02] Checking for CVMFS
[2025-02-26 19:23:02] No cvmfs_config command found, will try listing directly
[2025-02-26 19:23:02] CVMFS is ok
[2025-02-26 19:23:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-26 19:23:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-26 19:23:02] Further information can be found at the LHC@home message board.
[2025-02-26 19:23:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 19:23:02] Checking for apptainer binary...
[2025-02-26 19:23:02] which: no apptainer in ((null))
[2025-02-26 19:23:02] apptainer is not installed, using version from CVMFS
[2025-02-26 19:23:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 19:23:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot72/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-02-26 19:23:02] apptainer works
[2025-02-26 19:23:02] Set ATHENA_PROC_NUMBER=4
[2025-02-26 19:23:02] Set ATHENA_CORE_NUMBER=4
[2025-02-26 19:23:02] Starting ATLAS job with PandaID=6524111564
[2025-02-26 19:23:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot72/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-27 01:03:57]  *** The last 200 lines of the pilot log: ***
[2025-02-27 01:03:57] 2025-02-27 00:03:38,581 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-27 01:03:57] 2025-02-27 00:03:38,581 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-27 01:03:57] 2025-02-27 00:03:38,588 | INFO     | fitting pss+swap vs Time
[2025-02-27 01:03:57] 2025-02-27 00:03:38,588 | INFO     | model: linear, x: [1740594228.0, 1740594289.0, 1740594350.0, 1740594411.0, 1740594472.0, 1740594533.0, 1740594594.0, 1740594655.0, 1740594716.0, 1740594777.0, 1740
[2025-02-27 01:03:57] 2025-02-27 00:03:38,589 | INFO     | sum of square deviations: 11657595320.0
[2025-02-27 01:03:57] 2025-02-27 00:03:38,592 | INFO     | sum of deviations: 169342650402.99997
[2025-02-27 01:03:57] 2025-02-27 00:03:38,592 | INFO     | mean x: 1740604415.0
[2025-02-27 01:03:57] 2025-02-27 00:03:38,592 | INFO     | mean y: 2321519.8656716417
[2025-02-27 01:03:57] 2025-02-27 00:03:38,592 | INFO     | -- intersect: -25282358283.143932
[2025-02-27 01:03:57] 2025-02-27 00:03:38,592 | INFO     | intersect: -25282358283.143932
[2025-02-27 01:03:57] 2025-02-27 00:03:38,592 | INFO     | chi2: 5.1875488810370385
[2025-02-27 01:03:57] 2025-02-27 00:03:38,593 | INFO     | model: linear, x: [1740594228.0, 1740594289.0, 1740594350.0, 1740594411.0, 1740594472.0, 1740594533.0, 1740594594.0, 1740594655.0, 1740594716.0, 1740594777.0, 1740
[2025-02-27 01:03:57] 2025-02-27 00:03:38,593 | INFO     | sum of square deviations: 11143362422.5
[2025-02-27 01:03:57] 2025-02-27 00:03:38,596 | INFO     | sum of deviations: 187875333988.0
[2025-02-27 01:03:57] 2025-02-27 00:03:38,596 | INFO     | mean x: 1740604262.5
[2025-02-27 01:03:57] 2025-02-27 00:03:38,596 | INFO     | mean y: 2326938.6484848484
[2025-02-27 01:03:57] 2025-02-27 00:03:38,596 | INFO     | -- intersect: -29343986567.033775
[2025-02-27 01:03:57] 2025-02-27 00:03:38,596 | INFO     | intersect: -29343986567.033775
[2025-02-27 01:03:57] 2025-02-27 00:03:38,597 | INFO     | chi2: 4.403163777063
[2025-02-27 01:03:57] 2025-02-27 00:03:38,597 | INFO     | current chi2=4.403163777063 (change=15.120534224580314 %)
[2025-02-27 01:03:57] 2025-02-27 00:03:38,597 | INFO     | right removable region: 329
[2025-02-27 01:03:57] 2025-02-27 00:03:38,598 | INFO     | model: linear, x: [1740594533.0, 1740594594.0, 1740594655.0, 1740594716.0, 1740594777.0, 1740594838.0, 1740594899.0, 1740594960.0, 1740595021.0, 1740595082.0, 1740
[2025-02-27 01:03:57] 2025-02-27 00:03:38,599 | INFO     | sum of square deviations: 11143362422.5
[2025-02-27 01:03:57] 2025-02-27 00:03:38,602 | INFO     | sum of deviations: 86638665786.5
[2025-02-27 01:03:57] 2025-02-27 00:03:38,602 | INFO     | mean x: 1740604567.5
[2025-02-27 01:03:57] 2025-02-27 00:03:38,603 | INFO     | mean y: 2346006.8575757574
[2025-02-27 01:03:57] 2025-02-27 00:03:38,603 | INFO     | -- intersect: -13530701889.493196
[2025-02-27 01:03:57] 2025-02-27 00:03:38,603 | INFO     | intersect: -13530701889.493196
[2025-02-27 01:03:57] 2025-02-27 00:03:38,603 | INFO     | chi2: 2.5406293299631857
[2025-02-27 01:03:57] 2025-02-27 00:03:38,603 | INFO     | current chi2=2.5406293299631857 (change=51.02447440542882 %)
[2025-02-27 01:03:57] 2025-02-27 00:03:38,604 | INFO     | model: linear, x: [1740594838.0, 1740594899.0, 1740594960.0, 1740595021.0, 1740595082.0, 1740595143.0, 1740595204.0, 1740595265.0, 1740595326.0, 1740595387.0, 1740
[2025-02-27 01:03:57] 2025-02-27 00:03:38,604 | INFO     | sum of square deviations: 10644478650.0
[2025-02-27 01:03:57] 2025-02-27 00:03:38,607 | INFO     | sum of deviations: 19695917472.999977
[2025-02-27 01:03:57] 2025-02-27 00:03:38,607 | INFO     | mean x: 1740604720.0
[2025-02-27 01:03:57] 2025-02-27 00:03:38,607 | INFO     | mean y: 2366470.6123076924
[2025-02-27 01:03:57] 2025-02-27 00:03:38,607 | INFO     | -- intersect: -3218346167.8816624
[2025-02-27 01:03:57] 2025-02-27 00:03:38,607 | INFO     | intersect: -3218346167.8816624
[2025-02-27 01:03:57] 2025-02-27 00:03:38,608 | INFO     | chi2: 0.9437979518677235
[2025-02-27 01:03:57] 2025-02-27 00:03:38,608 | INFO     | current chi2=0.9437979518677235 (change=62.851804443216466 %)
[2025-02-27 01:03:57] 2025-02-27 00:03:38,608 | INFO     | model: linear, x: [1740595143.0, 1740595204.0, 1740595265.0, 1740595326.0, 1740595387.0, 1740595448.0, 1740595509.0, 1740595570.0, 1740595631.0, 1740595692.0, 1740
[2025-02-27 01:03:57] 2025-02-27 00:03:38,608 | INFO     | sum of square deviations: 10160711440.0
[2025-02-27 01:03:57] 2025-02-27 00:03:38,611 | INFO     | sum of deviations: 2384476915.500004
[2025-02-27 01:03:57] 2025-02-27 00:03:38,611 | INFO     | mean x: 1740604872.5
[2025-02-27 01:03:57] 2025-02-27 00:03:38,611 | INFO     | mean y: 2371906.771875
[2025-02-27 01:03:57] 2025-02-27 00:03:38,611 | INFO     | -- intersect: -406106590.2302087
[2025-02-27 01:03:57] 2025-02-27 00:03:38,611 | INFO     | intersect: -406106590.2302087
[2025-02-27 01:03:57] 2025-02-27 00:03:38,612 | INFO     | chi2: 0.817927067127096
[2025-02-27 01:03:57] 2025-02-27 00:03:38,612 | INFO     | current chi2=0.817927067127096 (change=13.33663465697675 %)
[2025-02-27 01:03:57] 2025-02-27 00:03:38,612 | INFO     | left removable region: 30
[2025-02-27 01:03:57] 2025-02-27 00:03:38,612 | INFO     | model: linear, x: [1740596058.0, 1740596119.0, 1740596180.0, 1740596241.0, 1740596302.0, 1740596363.0, 1740596424.0, 1740596485.0, 1740596546.0, 1740596607.0, 1740
[2025-02-27 01:03:57] 2025-02-27 00:03:38,613 | INFO     | sum of square deviations: 8288713550.0
[2025-02-27 01:03:57] 2025-02-27 00:03:38,615 | INFO     | sum of deviations: 14896150834.000004
[2025-02-27 01:03:57] 2025-02-27 00:03:38,615 | INFO     | mean x: 1740605147.0
[2025-02-27 01:03:57] 2025-02-27 00:03:38,615 | INFO     | mean y: 2380942.217391304
[2025-02-27 01:03:57] 2025-02-27 00:03:38,615 | INFO     | -- intersect: -3125766345.7473073
[2025-02-27 01:03:57] 2025-02-27 00:03:38,616 | INFO     | intersect: -3125766345.7473073
[2025-02-27 01:03:57] 2025-02-27 00:03:38,616 | INFO     | chi2: 0.0010288642921724965
[2025-02-27 01:03:57] 2025-02-27 00:03:38,616 | INFO     | -- intersect: -3125766345.7473073
[2025-02-27 01:03:57] 2025-02-27 00:03:38,616 | INFO     | current memory leak: 1.80 B/s (using 299 data points, chi2=0.00)
[2025-02-27 01:03:57] 2025-02-27 00:03:38,617 | INFO     | ..............................
[2025-02-27 01:03:57] 2025-02-27 00:03:38,617 | INFO     | . Timing measurements:
[2025-02-27 01:03:57] 2025-02-27 00:03:38,617 | INFO     | . get job = 0 s
[2025-02-27 01:03:57] 2025-02-27 00:03:38,617 | INFO     | . initial setup = 1 s
[2025-02-27 01:03:57] 2025-02-27 00:03:38,618 | INFO     | . payload setup = 8 s
[2025-02-27 01:03:57] 2025-02-27 00:03:38,618 | INFO     | . stage-in = 0 s
[2025-02-27 01:03:57] 2025-02-27 00:03:38,618 | INFO     | . payload execution = 20382 s
[2025-02-27 01:03:57] 2025-02-27 00:03:38,618 | INFO     | . stage-out = 1 s
[2025-02-27 01:03:57] 2025-02-27 00:03:38,618 | INFO     | . log creation = 0 s
[2025-02-27 01:03:57] 2025-02-27 00:03:38,618 | INFO     | ..............................
[2025-02-27 01:03:57] 2025-02-27 00:03:38,733 | INFO     | 
[2025-02-27 01:03:57] 2025-02-27 00:03:38,734 | INFO     | job summary report
[2025-02-27 01:03:57] 2025-02-27 00:03:38,734 | INFO     | --------------------------------------------------
[2025-02-27 01:03:57] 2025-02-27 00:03:38,734 | INFO     | PanDA job id: 6524111564
[2025-02-27 01:03:57] 2025-02-27 00:03:38,734 | INFO     | task id: 43205094
[2025-02-27 01:03:57] 2025-02-27 00:03:38,734 | INFO     | errors: (none)
[2025-02-27 01:03:57] 2025-02-27 00:03:38,734 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-27 01:03:57] 2025-02-27 00:03:38,734 | INFO     | pilot state: finished 
[2025-02-27 01:03:57] 2025-02-27 00:03:38,734 | INFO     | transexitcode: 0
[2025-02-27 01:03:57] 2025-02-27 00:03:38,734 | INFO     | exeerrorcode: 0
[2025-02-27 01:03:57] 2025-02-27 00:03:38,735 | INFO     | exeerrordiag: 
[2025-02-27 01:03:57] 2025-02-27 00:03:38,735 | INFO     | exitcode: 0
[2025-02-27 01:03:57] 2025-02-27 00:03:38,735 | INFO     | exitmsg: OK
[2025-02-27 01:03:57] 2025-02-27 00:03:38,735 | INFO     | cpuconsumptiontime: 77708 s
[2025-02-27 01:03:57] 2025-02-27 00:03:38,735 | INFO     | nevents: 400
[2025-02-27 01:03:57] 2025-02-27 00:03:38,735 | INFO     | neventsw: 0
[2025-02-27 01:03:57] 2025-02-27 00:03:38,735 | INFO     | pid: 365718
[2025-02-27 01:03:57] 2025-02-27 00:03:38,735 | INFO     | pgrp: 365718
[2025-02-27 01:03:57] 2025-02-27 00:03:38,735 | INFO     | corecount: 4
[2025-02-27 01:03:57] 2025-02-27 00:03:38,735 | INFO     | event service: False
[2025-02-27 01:03:57] 2025-02-27 00:03:38,735 | INFO     | sizes: {0: 2363665, 1: 2363807, 7: 2364013, 11: 2364041, 20394: 2396970, 20397: 2405933, 20400: 2406117, 20406: 2406287}
[2025-02-27 01:03:57] 2025-02-27 00:03:38,736 | INFO     | --------------------------------------------------
[2025-02-27 01:03:57] 2025-02-27 00:03:38,736 | INFO     | 
[2025-02-27 01:03:57] 2025-02-27 00:03:38,736 | INFO     | executing command: ls -lF /scratch/boinc/var/slot72/slots/0
[2025-02-27 01:03:57] 2025-02-27 00:03:38,765 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-27 01:03:57] 2025-02-27 00:03:38,766 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-27 01:03:57] 2025-02-27 00:03:38,766 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-27 01:03:57] 2025-02-27 00:03:38,766 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-27 01:03:57] 2025-02-27 00:03:38,766 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-27 01:03:57] 2025-02-27 00:03:38,766 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-27 01:03:57] 2025-02-27 00:03:38,766 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-27 01:03:57] 2025-02-27 00:03:38,766 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-27 01:03:57] 2025-02-27 00:03:38,766 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-27 01:03:57] 2025-02-27 00:03:38,766 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-27 01:03:57] 2025-02-27 00:03:38,767 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-27 01:03:57] 2025-02-27 00:03:38,767 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-27 01:03:57] 2025-02-27 00:03:38,767 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-27 01:03:57] 2025-02-27 00:03:38,767 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-27 01:03:57] 2025-02-27 00:03:38,767 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-27 01:03:57] 2025-02-27 00:03:38,767 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-27 01:03:57] 2025-02-27 00:03:38,767 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-27 01:03:57] 2025-02-27 00:03:38,767 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-27 01:03:57] 2025-02-27 00:03:38,767 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-27 01:03:57] 2025-02-27 00:03:38,767 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-27 01:03:57] 2025-02-27 00:03:38,768 | INFO     | job 6524111564 has completed (purged errors)
[2025-02-27 01:03:57] 2025-02-27 00:03:38,768 | INFO     | overall cleanup function is called
[2025-02-27 01:03:57] 2025-02-27 00:03:39,776 | INFO     | --- collectZombieJob: --- 10, [365718]
[2025-02-27 01:03:57] 2025-02-27 00:03:39,777 | INFO     | zombie collector waiting for pid 365718
[2025-02-27 01:03:57] 2025-02-27 00:03:39,777 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-27 01:03:57] 2025-02-27 00:03:39,777 | INFO     | collected zombie processes
[2025-02-27 01:03:57] 2025-02-27 00:03:39,777 | INFO     | will attempt to kill all subprocesses of pid=365718
[2025-02-27 01:03:57] 2025-02-27 00:03:40,075 | INFO     | process IDs to be killed: [365718] (in reverse order)
[2025-02-27 01:03:57] 2025-02-27 00:03:40,344 | WARNING  | found no corresponding commands to process id(s)
[2025-02-27 01:03:57] 2025-02-27 00:03:40,345 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-27 01:03:57] 2025-02-27 00:03:40,368 | INFO     | did not find any defunct processes belonging to 365718
[2025-02-27 01:03:57] 2025-02-27 00:03:40,386 | INFO     | did not find any defunct processes belonging to 365718
[2025-02-27 01:03:57] 2025-02-27 00:03:40,387 | INFO     | ready for new job
[2025-02-27 01:03:57] 2025-02-27 00:03:40,387 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-27 01:03:57] 2025-02-27 00:03:40,390 | INFO     | **************************************
[2025-02-27 01:03:57] 2025-02-27 00:03:40,390 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-27 01:03:57] 2025-02-27 00:03:40,390 | INFO     | **************************************
[2025-02-27 01:03:57] 2025-02-27 00:03:40,390 | INFO     | 
[2025-02-27 01:03:57] 2025-02-27 00:03:40,399 | INFO     | architecture information:
[2025-02-27 01:03:57] 2025-02-27 00:03:40,399 | INFO     | executing command: cat /etc/os-release
[2025-02-27 01:03:57] 2025-02-27 00:03:40,422 | INFO     | cat /etc/os-release:
[2025-02-27 01:03:57] NAME="CentOS Linux"
[2025-02-27 01:03:57] VERSION="7 (Core)"
[2025-02-27 01:03:57] ID="centos"
[2025-02-27 01:03:57] ID_LIKE="rhel fedora"
[2025-02-27 01:03:57] VERSION_ID="7"
[2025-02-27 01:03:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-27 01:03:57] ANSI_COLOR="0;31"
[2025-02-27 01:03:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-27 01:03:57] HOME_URL="https://www.centos.org/"
[2025-02-27 01:03:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-27 01:03:57] 
[2025-02-27 01:03:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-27 01:03:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-27 01:03:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-27 01:03:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-27 01:03:57] 
[2025-02-27 01:03:57] 2025-02-27 00:03:40,422 | INFO     | **************************************
[2025-02-27 01:03:57] 2025-02-27 00:03:40,925 | INFO     | executing command: df -mP /scratch/boinc/var/slot72/slots/0
[2025-02-27 01:03:57] 2025-02-27 00:03:40,950 | INFO     | sufficient remaining disk space (3340804030464 B)
[2025-02-27 01:03:57] 2025-02-27 00:03:40,951 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-27 01:03:57] 2025-02-27 00:03:40,951 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-27 01:03:57] 2025-02-27 00:03:40,951 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-27 01:03:57] 2025-02-27 00:03:40,952 | INFO     | aborting loop
[2025-02-27 01:03:57] 2025-02-27 00:03:41,047 | INFO     | all data control threads have been joined
[2025-02-27 01:03:57] 2025-02-27 00:03:41,048 | INFO     | all payload control threads have been joined
[2025-02-27 01:03:57] 2025-02-27 00:03:41,656 | INFO     | all job control threads have been joined
[2025-02-27 01:03:57] 2025-02-27 00:03:41,703 | INFO     | found 0 job(s) in 20 queues
[2025-02-27 01:03:57] 2025-02-27 00:03:41,703 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-27 01:03:57] 2025-02-27 00:03:41,704 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-27 01:03:57] 2025-02-27 00:03:41,956 | INFO     | [job] retrieve thread has finished
[2025-02-27 01:03:57] 2025-02-27 00:03:41,957 | INFO     | [job] job monitor thread has finished
[2025-02-27 01:03:57] 2025-02-27 00:03:42,024 | INFO     | [data] copytool_in thread has finished
[2025-02-27 01:03:57] 2025-02-27 00:03:42,051 | INFO     | [data] control thread has finished
[2025-02-27 01:03:57] 2025-02-27 00:03:42,054 | INFO     | [payload] control thread has finished
[2025-02-27 01:03:57] 2025-02-27 00:03:42,148 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-27 01:03:57] 2025-02-27 00:03:42,186 | INFO     | [job] validate thread has finished
[2025-02-27 01:03:57] 2025-02-27 00:03:42,394 | INFO     | [payload] validate_post thread has finished
[2025-02-27 01:03:57] 2025-02-27 00:03:42,466 | INFO     | [payload] execute_payloads thread has finished
[2025-02-27 01:03:57] 2025-02-27 00:03:42,627 | INFO     | [job] create_data_payload thread has finished
[2025-02-27 01:03:57] 2025-02-27 00:03:42,661 | INFO     | [job] control thread has finished
[2025-02-27 01:03:57] 2025-02-27 00:03:42,874 | INFO     | [payload] validate_pre thread has finished
[2025-02-27 01:03:57] 2025-02-27 00:03:42,952 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-27 01:03:57] 2025-02-27 00:03:43,066 | INFO     | [payload] failed_post thread has finished
[2025-02-27 01:03:57] 2025-02-27 00:03:43,744 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-27 01:03:57] 2025-02-27 00:03:44,153 | INFO     | [data] copytool_out thread has finished
[2025-02-27 01:03:57] 2025-02-27 00:03:44,750 | INFO     | [job] queue monitor thread has finished
[2025-02-27 01:03:57] 2025-02-27 00:03:46,959 | INFO     | [data] queue_monitor thread has finished
[2025-02-27 01:03:57] 2025-02-27 00:03:51,039 | INFO     | job.realtimelogging is not enabled
[2025-02-27 01:03:57] 2025-02-27 00:03:52,045 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-27 01:03:57] 2025-02-27 00:03:52,142 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23179684042560)>', '<ExcThread(monitor, started 23179451926272)>']
[2025-02-27 01:03:57] 2025-02-27 00:03:52,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-27 01:03:57] 2025-02-27 00:03:52,756 | INFO     | [monitor] control thread has ended
[2025-02-27 01:03:57] 2025-02-27 00:03:57,167 | INFO     | all workflow threads have been joined
[2025-02-27 01:03:57] 2025-02-27 00:03:57,168 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-27 01:03:57] 2025-02-27 00:03:57,168 | INFO     | traces error code: 0
[2025-02-27 01:03:57] 2025-02-27 00:03:57,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-27 01:03:57] 2025-02-27 00:03:57,312 [wrapper] ==== pilot stdout END ====
[2025-02-27 01:03:57] 2025-02-27 00:03:57,316 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-27 01:03:57] 2025-02-27 00:03:57,320 [wrapper] pilotpid: 358247
[2025-02-27 01:03:57] 2025-02-27 00:03:57,323 [wrapper] Pilot exit status: 0
[2025-02-27 01:03:57] 2025-02-27 00:03:57,338 [wrapper] pandaids: 6524111564
[2025-02-27 01:03:57] 2025-02-27 00:03:57,480 [wrapper] cleanup supervisor_pilot 1896595 358248
[2025-02-27 01:03:57] 2025-02-27 00:03:57,484 [wrapper] Test setup, not cleaning
[2025-02-27 01:03:57] 2025-02-27 00:03:57,490 [wrapper] apfmon messages muted
[2025-02-27 01:03:57] 2025-02-27 00:03:57,493 [wrapper] ==== wrapper stdout END ====
[2025-02-27 01:03:57] 2025-02-27 00:03:57,496 [wrapper] ==== wrapper stderr END ====
[2025-02-27 01:03:57]  *** Error codes and diagnostics ***
[2025-02-27 01:03:57]     "exeErrorCode": 0,
[2025-02-27 01:03:57]     "exeErrorDiag": "",
[2025-02-27 01:03:57]     "pilotErrorCode": 0,
[2025-02-27 01:03:57]     "pilotErrorDiag": "",
[2025-02-27 01:03:57]  *** Listing of results directory ***
[2025-02-27 01:03:57] total 669268
[2025-02-27 01:03:57] -rw-r--r-- 1 boinc boinc    491065 Feb 23 09:47 pilot3.tar.gz
[2025-02-27 01:03:57] -rw-r--r-- 1 boinc boinc      5118 Feb 23 10:08 queuedata.json
[2025-02-27 01:03:57] -rwx------ 1 boinc boinc     35865 Feb 23 10:09 runpilot2-wrapper.sh
[2025-02-27 01:03:57] -rw-r--r-- 1 boinc boinc       100 Feb 26 19:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-27 01:03:57] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 19:22 run_atlas
[2025-02-27 01:03:57] -rw-r--r-- 1 boinc boinc       105 Feb 26 19:22 job.xml
[2025-02-27 01:03:57] -rw-r--r-- 2 boinc boinc 341984880 Feb 26 19:23 EVNT.43092757._002007.pool.root.1
[2025-02-27 01:03:57] -rw-r--r-- 1 boinc boinc      6677 Feb 26 19:23 init_data.xml
[2025-02-27 01:03:57] -rw-r--r-- 2 boinc boinc     17569 Feb 26 19:23 start_atlas.sh
[2025-02-27 01:03:57] drwxrwx--x 2 boinc boinc      4096 Feb 26 19:23 shared
[2025-02-27 01:03:57] -rw-r--r-- 2 boinc boinc    503556 Feb 26 19:23 input.tar.gz
[2025-02-27 01:03:57] -rw-r--r-- 1 boinc boinc         0 Feb 26 19:23 boinc_lockfile
[2025-02-27 01:03:57] -rw-r--r-- 1 boinc boinc      2547 Feb 26 19:23 pandaJob.out
[2025-02-27 01:03:57] -rw------- 1 boinc boinc       424 Feb 26 19:23 setup.sh.local
[2025-02-27 01:03:57] -rw------- 1 boinc boinc    990575 Feb 26 19:23 agis_schedconf.cvmfs.json
[2025-02-27 01:03:57] drwx------ 4 boinc boinc      4096 Feb 26 19:23 pilot3
[2025-02-27 01:03:57] -rw------- 1 boinc boinc 334079504 Feb 27 01:02 HITS.43205094._038849.pool.root.1
[2025-02-27 01:03:57] -rw-r--r-- 1 boinc boinc       531 Feb 27 01:03 boinc_task_state.xml
[2025-02-27 01:03:57] -rw------- 1 boinc boinc        95 Feb 27 01:03 pilot_heartbeat.json
[2025-02-27 01:03:57] -rw------- 1 boinc boinc      1023 Feb 27 01:03 memory_monitor_summary.json
[2025-02-27 01:03:57] -rw------- 1 boinc boinc   1569202 Feb 27 01:03 agis_ddmendpoints.agis.ALL.json
[2025-02-27 01:03:57] -rw------- 1 boinc boinc    422272 Feb 27 01:03 log.43205094._038849.job.log.tgz.1
[2025-02-27 01:03:57] -rw-r--r-- 1 boinc boinc      8192 Feb 27 01:03 boinc_mmap_file
[2025-02-27 01:03:57] -rw-r--r-- 1 boinc boinc        28 Feb 27 01:03 wrapper_checkpoint.txt
[2025-02-27 01:03:57] -rw------- 1 boinc boinc      7695 Feb 27 01:03 heartbeat.json
[2025-02-27 01:03:57] -rw------- 1 boinc boinc      4298 Feb 27 01:03 pilotlog.txt
[2025-02-27 01:03:57] -rw------- 1 boinc boinc   2308313 Feb 27 01:03 log.43205094._038849.job.log.1
[2025-02-27 01:03:57] -rw------- 1 boinc boinc       357 Feb 27 01:03 output.list
[2025-02-27 01:03:57] -rw-r--r-- 1 boinc boinc       620 Feb 27 01:03 runtime_log
[2025-02-27 01:03:57] -rw------- 1 boinc boinc   2754560 Feb 27 01:03 result.tar.gz
[2025-02-27 01:03:57] -rw-r--r-- 1 boinc boinc     11424 Feb 27 01:03 runtime_log.err
[2025-02-27 01:03:57] -rw------- 1 boinc boinc       666 Feb 27 01:03 GVXNDmhAN66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmrIvKDmuDuzCn.diag
[2025-02-27 01:03:57] -rw-r--r-- 1 boinc boinc     21280 Feb 27 01:03 stderr.txt
[2025-02-27 01:03:57] HITS file was successfully produced:
[2025-02-27 01:03:57] -rw------- 1 boinc boinc 334079504 Feb 27 01:02 shared/HITS.pool.root.1
[2025-02-27 01:03:57]  *** Contents of shared directory: ***
[2025-02-27 01:03:57] total 663436
[2025-02-27 01:03:57] -rw-r--r-- 2 boinc boinc 341984880 Feb 26 19:23 ATLAS.root_0
[2025-02-27 01:03:57] -rw-r--r-- 2 boinc boinc     17569 Feb 26 19:23 start_atlas.sh
[2025-02-27 01:03:57] -rw-r--r-- 2 boinc boinc    503556 Feb 26 19:23 input.tar.gz
[2025-02-27 01:03:57] -rw------- 1 boinc boinc 334079504 Feb 27 01:02 HITS.pool.root.1
[2025-02-27 01:03:57] -rw------- 1 boinc boinc   2754560 Feb 27 01:03 result.tar.gz
01:03:58 (353786): run_atlas exited; CPU time 77434.979216
01:03:58 (353786): called boinc_finish(0)

</stderr_txt>
]]>

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