Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:52:41 (3943866): wrapper (7.7.26015): starting
08:52:41 (3943866): wrapper: running run_atlas (--nthreads 4)
[2025-02-27 08:52:41] Arguments: --nthreads 4
[2025-02-27 08:52:41] Threads: 4
[2025-02-27 08:52:41] Checking for CVMFS
[2025-02-27 08:52:41] No cvmfs_config command found, will try listing directly
[2025-02-27 08:52:41] CVMFS is ok
[2025-02-27 08:52:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-27 08:52:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-27 08:52:41] Further information can be found at the LHC@home message board.
[2025-02-27 08:52:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-27 08:52:41] Checking for apptainer binary...
[2025-02-27 08:52:41] which: no apptainer in ((null))
[2025-02-27 08:52:41] apptainer is not installed, using version from CVMFS
[2025-02-27 08:52:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-27 08:52:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-02-27 08:52:41] apptainer works
[2025-02-27 08:52:41] Set ATHENA_PROC_NUMBER=4
[2025-02-27 08:52:41] Set ATHENA_CORE_NUMBER=4
[2025-02-27 08:52:41] Starting ATLAS job with PandaID=6524371865
[2025-02-27 08:52:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-27 12:56:20]  *** The last 200 lines of the pilot log: ***
[2025-02-27 12:56:20] 2025-02-27 11:56:00,565 | INFO     | intersect: -50857401370.505035
[2025-02-27 12:56:20] 2025-02-27 11:56:00,565 | INFO     | chi2: 3.997393190034417
[2025-02-27 12:56:20] 2025-02-27 11:56:00,565 | INFO     | current chi2=3.997393190034417 (change=15.80525545351324 %)
[2025-02-27 12:56:20] 2025-02-27 11:56:00,565 | INFO     | right removable region: 233
[2025-02-27 12:56:20] 2025-02-27 11:56:00,566 | INFO     | model: linear, x: [1740643109.0, 1740643170.0, 1740643231.0, 1740643292.0, 1740643353.0, 1740643414.0, 1740643475.0, 1740643536.0, 1740643597.0, 1740643658.0, 1740
[2025-02-27 12:56:20] 2025-02-27 11:56:00,566 | INFO     | sum of square deviations: 3972995422.5
[2025-02-27 12:56:20] 2025-02-27 11:56:00,567 | INFO     | sum of deviations: 48788628715.50001
[2025-02-27 12:56:20] 2025-02-27 11:56:00,567 | INFO     | mean x: 1740650215.5
[2025-02-27 12:56:20] 2025-02-27 11:56:00,567 | INFO     | mean y: 2331693.517094017
[2025-02-27 12:56:20] 2025-02-27 11:56:00,568 | INFO     | -- intersect: -21372960260.41784
[2025-02-27 12:56:20] 2025-02-27 11:56:00,568 | INFO     | intersect: -21372960260.41784
[2025-02-27 12:56:20] 2025-02-27 11:56:00,568 | INFO     | chi2: 2.34170683126908
[2025-02-27 12:56:20] 2025-02-27 11:56:00,568 | INFO     | current chi2=2.34170683126908 (change=50.678004617362724 %)
[2025-02-27 12:56:20] 2025-02-27 11:56:00,568 | INFO     | model: linear, x: [1740643414.0, 1740643475.0, 1740643536.0, 1740643597.0, 1740643658.0, 1740643719.0, 1740643780.0, 1740643841.0, 1740643902.0, 1740643963.0, 1740
[2025-02-27 12:56:20] 2025-02-27 11:56:00,568 | INFO     | sum of square deviations: 3723716330.0
[2025-02-27 12:56:20] 2025-02-27 11:56:00,570 | INFO     | sum of deviations: 3169299042.000002
[2025-02-27 12:56:20] 2025-02-27 11:56:00,570 | INFO     | mean x: 1740650368.0
[2025-02-27 12:56:20] 2025-02-27 11:56:00,570 | INFO     | mean y: 2359605.9737991267
[2025-02-27 12:56:20] 2025-02-27 11:56:00,570 | INFO     | -- intersect: -1479128524.396043
[2025-02-27 12:56:20] 2025-02-27 11:56:00,570 | INFO     | intersect: -1479128524.396043
[2025-02-27 12:56:20] 2025-02-27 11:56:00,570 | INFO     | chi2: 0.8419066539903997
[2025-02-27 12:56:20] 2025-02-27 11:56:00,570 | INFO     | current chi2=0.8419066539903997 (change=64.04730759852927 %)
[2025-02-27 12:56:20] 2025-02-27 11:56:00,571 | INFO     | model: linear, x: [1740643719.0, 1740643780.0, 1740643841.0, 1740643902.0, 1740643963.0, 1740644024.0, 1740644085.0, 1740644146.0, 1740644207.0, 1740644268.0, 1740
[2025-02-27 12:56:20] 2025-02-27 11:56:00,573 | INFO     | sum of square deviations: 3485088600.0
[2025-02-27 12:56:20] 2025-02-27 11:56:00,574 | INFO     | sum of deviations: -4609399303.000002
[2025-02-27 12:56:20] 2025-02-27 11:56:00,574 | INFO     | mean x: 1740650520.5
[2025-02-27 12:56:20] 2025-02-27 11:56:00,575 | INFO     | mean y: 2364542.0535714286
[2025-02-27 12:56:20] 2025-02-27 11:56:00,575 | INFO     | -- intersect: 2304559469.3100233
[2025-02-27 12:56:20] 2025-02-27 11:56:00,575 | INFO     | intersect: 2304559469.3100233
[2025-02-27 12:56:20] 2025-02-27 11:56:00,575 | INFO     | chi2: 0.782617390532902
[2025-02-27 12:56:20] 2025-02-27 11:56:00,575 | INFO     | current chi2=0.782617390532902 (change=7.042260941457497 %)
[2025-02-27 12:56:20] 2025-02-27 11:56:00,575 | INFO     | left removable region: 30
[2025-02-27 12:56:20] 2025-02-27 11:56:00,575 | INFO     | model: linear, x: [1740644634.0, 1740644695.0, 1740644756.0, 1740644817.0, 1740644878.0, 1740644939.0, 1740645000.0, 1740645061.0, 1740645122.0, 1740645183.0, 1740
[2025-02-27 12:56:20] 2025-02-27 11:56:00,576 | INFO     | sum of square deviations: 2593916542.0
[2025-02-27 12:56:20] 2025-02-27 11:56:00,577 | INFO     | sum of deviations: 5994648059.0
[2025-02-27 12:56:20] 2025-02-27 11:56:00,577 | INFO     | mean x: 1740650795.0
[2025-02-27 12:56:20] 2025-02-27 11:56:00,577 | INFO     | mean y: 2375620.906403941
[2025-02-27 12:56:20] 2025-02-27 11:56:00,577 | INFO     | -- intersect: -4020340122.1367874
[2025-02-27 12:56:20] 2025-02-27 11:56:00,577 | INFO     | intersect: -4020340122.1367874
[2025-02-27 12:56:20] 2025-02-27 11:56:00,577 | INFO     | chi2: 0.0005782817471620843
[2025-02-27 12:56:20] 2025-02-27 11:56:00,577 | INFO     | -- intersect: -4020340122.1367874
[2025-02-27 12:56:20] 2025-02-27 11:56:00,578 | INFO     | current memory leak: 2.31 B/s (using 203 data points, chi2=0.00)
[2025-02-27 12:56:20] 2025-02-27 11:56:00,578 | INFO     | ..............................
[2025-02-27 12:56:20] 2025-02-27 11:56:00,579 | INFO     | . Timing measurements:
[2025-02-27 12:56:20] 2025-02-27 11:56:00,579 | INFO     | . get job = 0 s
[2025-02-27 12:56:20] 2025-02-27 11:56:00,579 | INFO     | . initial setup = 1 s
[2025-02-27 12:56:20] 2025-02-27 11:56:00,579 | INFO     | . payload setup = 7 s
[2025-02-27 12:56:20] 2025-02-27 11:56:00,579 | INFO     | . stage-in = 0 s
[2025-02-27 12:56:20] 2025-02-27 11:56:00,579 | INFO     | . payload execution = 14550 s
[2025-02-27 12:56:20] 2025-02-27 11:56:00,579 | INFO     | . stage-out = 1 s
[2025-02-27 12:56:20] 2025-02-27 11:56:00,579 | INFO     | . log creation = 0 s
[2025-02-27 12:56:20] 2025-02-27 11:56:00,579 | INFO     | ..............................
[2025-02-27 12:56:20] 2025-02-27 11:56:00,774 | WARNING  | process 3958136 can no longer be monitored (due to stat problems) - aborting
[2025-02-27 12:56:20] 2025-02-27 11:56:00,774 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6524371865/memory_monitor_summary.json (trf name=prmon)
[2025-02-27 12:56:20] 2025-02-27 11:56:00,775 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6524371865/memory_monitor_summary.json (trf name=prmon)
[2025-02-27 12:56:20] 2025-02-27 11:56:00,777 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2360724 B
[2025-02-27 12:56:20] 2025-02-27 11:56:00,777 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16285 B
[2025-02-27 12:56:20] 2025-02-27 11:56:00,777 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-02-27 12:56:20] 2025-02-27 11:56:00,798 | INFO     | sufficient remaining disk space (3366258212864 B)
[2025-02-27 12:56:20] 2025-02-27 11:56:00,799 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-02-27 12:56:20] 2025-02-27 11:56:00,801 | INFO     | size of work directory /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6524371865: 2721310 B (within 2537553920 B limit)
[2025-02-27 12:56:20] 2025-02-27 11:56:00,801 | INFO     | pfn file=/scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6524371865/HITS.43078919._091091.pool.root.1 does not exist (skip from workdir size calculation)
[2025-02-27 12:56:20] 2025-02-27 11:56:00,801 | INFO     | total size of present files: 0 B (workdir size: 2721310 B)
[2025-02-27 12:56:20] 2025-02-27 11:56:00,801 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6524371865/HITS.43078919._091091.pool.root.1 since it does not exist
[2025-02-27 12:56:20] 2025-02-27 11:56:00,824 | INFO     | 
[2025-02-27 12:56:20] 2025-02-27 11:56:00,824 | INFO     | job summary report
[2025-02-27 12:56:20] 2025-02-27 11:56:00,825 | INFO     | --------------------------------------------------
[2025-02-27 12:56:20] 2025-02-27 11:56:00,825 | INFO     | PanDA job id: 6524371865
[2025-02-27 12:56:20] 2025-02-27 11:56:00,825 | INFO     | task id: 43078919
[2025-02-27 12:56:20] 2025-02-27 11:56:00,825 | INFO     | errors: (none)
[2025-02-27 12:56:20] 2025-02-27 11:56:00,825 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-27 12:56:20] 2025-02-27 11:56:00,825 | INFO     | pilot state: finished 
[2025-02-27 12:56:20] 2025-02-27 11:56:00,825 | INFO     | transexitcode: 0
[2025-02-27 12:56:20] 2025-02-27 11:56:00,825 | INFO     | exeerrorcode: 0
[2025-02-27 12:56:20] 2025-02-27 11:56:00,825 | INFO     | exeerrordiag: 
[2025-02-27 12:56:20] 2025-02-27 11:56:00,825 | INFO     | exitcode: 0
[2025-02-27 12:56:20] 2025-02-27 11:56:00,826 | INFO     | exitmsg: OK
[2025-02-27 12:56:20] 2025-02-27 11:56:00,826 | INFO     | cpuconsumptiontime: 54743 s
[2025-02-27 12:56:20] 2025-02-27 11:56:00,826 | INFO     | nevents: 400
[2025-02-27 12:56:20] 2025-02-27 11:56:00,826 | INFO     | neventsw: 0
[2025-02-27 12:56:20] 2025-02-27 11:56:00,826 | INFO     | pid: 3958136
[2025-02-27 12:56:20] 2025-02-27 11:56:00,826 | INFO     | pgrp: 3958136
[2025-02-27 12:56:20] 2025-02-27 11:56:00,826 | INFO     | corecount: 4
[2025-02-27 12:56:20] 2025-02-27 11:56:00,826 | INFO     | event service: False
[2025-02-27 12:56:20] 2025-02-27 11:56:00,826 | INFO     | sizes: {0: 2363783, 5: 2363989, 11: 2364045, 14562: 2394653, 14563: 2403616, 14564: 2403672, 14571: 2403970}
[2025-02-27 12:56:20] 2025-02-27 11:56:00,826 | INFO     | --------------------------------------------------
[2025-02-27 12:56:20] 2025-02-27 11:56:00,827 | INFO     | 
[2025-02-27 12:56:20] 2025-02-27 11:56:00,827 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-02-27 12:56:20] 2025-02-27 11:56:00,859 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-27 12:56:20] 2025-02-27 11:56:00,859 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-27 12:56:20] 2025-02-27 11:56:00,859 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-27 12:56:20] 2025-02-27 11:56:00,860 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-27 12:56:20] 2025-02-27 11:56:00,860 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-27 12:56:20] 2025-02-27 11:56:00,860 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-27 12:56:20] 2025-02-27 11:56:00,860 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-27 12:56:20] 2025-02-27 11:56:00,860 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-27 12:56:20] 2025-02-27 11:56:00,860 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-27 12:56:20] 2025-02-27 11:56:00,860 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-27 12:56:20] 2025-02-27 11:56:00,860 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-27 12:56:20] 2025-02-27 11:56:00,860 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-27 12:56:20] 2025-02-27 11:56:00,861 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-27 12:56:20] 2025-02-27 11:56:00,861 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-27 12:56:20] 2025-02-27 11:56:00,861 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-27 12:56:20] 2025-02-27 11:56:00,861 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-27 12:56:20] 2025-02-27 11:56:00,861 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-27 12:56:20] 2025-02-27 11:56:00,861 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-27 12:56:20] 2025-02-27 11:56:00,861 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-27 12:56:20] 2025-02-27 11:56:00,861 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-27 12:56:20] 2025-02-27 11:56:00,861 | INFO     | job 6524371865 has completed (purged errors)
[2025-02-27 12:56:20] 2025-02-27 11:56:00,862 | INFO     | overall cleanup function is called
[2025-02-27 12:56:20] 2025-02-27 11:56:01,053 | INFO     | number of running child processes to parent process 3958136: 1
[2025-02-27 12:56:20] 2025-02-27 11:56:01,053 | INFO     | maximum number of monitored processes: 6
[2025-02-27 12:56:20] 2025-02-27 11:56:01,054 | INFO     | aborting job monitoring since job object (job id=6524371865) has expired
[2025-02-27 12:56:20] 2025-02-27 11:56:01,066 | INFO     | PID=3947835 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-02-27 12:56:20] 2025-02-27 11:56:01,066 | INFO     | .. there are 19 such processes running
[2025-02-27 12:56:20] 2025-02-27 11:56:01,872 | INFO     | --- collectZombieJob: --- 10, [3958136]
[2025-02-27 12:56:20] 2025-02-27 11:56:01,873 | INFO     | zombie collector waiting for pid 3958136
[2025-02-27 12:56:20] 2025-02-27 11:56:01,873 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-27 12:56:20] 2025-02-27 11:56:01,873 | INFO     | collected zombie processes
[2025-02-27 12:56:20] 2025-02-27 11:56:01,873 | INFO     | will attempt to kill all subprocesses of pid=3958136
[2025-02-27 12:56:20] 2025-02-27 11:56:02,119 | INFO     | process IDs to be killed: [3958136] (in reverse order)
[2025-02-27 12:56:20] 2025-02-27 11:56:02,332 | WARNING  | found no corresponding commands to process id(s)
[2025-02-27 12:56:20] 2025-02-27 11:56:02,333 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-27 12:56:20] 2025-02-27 11:56:02,353 | INFO     | did not find any defunct processes belonging to 3958136
[2025-02-27 12:56:20] 2025-02-27 11:56:02,368 | INFO     | did not find any defunct processes belonging to 3958136
[2025-02-27 12:56:20] 2025-02-27 11:56:02,369 | INFO     | ready for new job
[2025-02-27 12:56:20] 2025-02-27 11:56:02,369 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-27 12:56:20] 2025-02-27 11:56:02,371 | INFO     | **************************************
[2025-02-27 12:56:20] 2025-02-27 11:56:02,371 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-27 12:56:20] 2025-02-27 11:56:02,371 | INFO     | **************************************
[2025-02-27 12:56:20] 2025-02-27 11:56:02,371 | INFO     | 
[2025-02-27 12:56:20] 2025-02-27 11:56:02,379 | INFO     | architecture information:
[2025-02-27 12:56:20] 2025-02-27 11:56:02,380 | INFO     | executing command: cat /etc/os-release
[2025-02-27 12:56:20] 2025-02-27 11:56:02,404 | INFO     | cat /etc/os-release:
[2025-02-27 12:56:20] NAME="CentOS Linux"
[2025-02-27 12:56:20] VERSION="7 (Core)"
[2025-02-27 12:56:20] ID="centos"
[2025-02-27 12:56:20] ID_LIKE="rhel fedora"
[2025-02-27 12:56:20] VERSION_ID="7"
[2025-02-27 12:56:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-27 12:56:20] ANSI_COLOR="0;31"
[2025-02-27 12:56:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-27 12:56:20] HOME_URL="https://www.centos.org/"
[2025-02-27 12:56:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-27 12:56:20] 
[2025-02-27 12:56:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-27 12:56:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-27 12:56:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-27 12:56:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-27 12:56:20] 
[2025-02-27 12:56:20] 2025-02-27 11:56:02,404 | INFO     | **************************************
[2025-02-27 12:56:20] 2025-02-27 11:56:02,907 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-02-27 12:56:20] 2025-02-27 11:56:02,928 | INFO     | sufficient remaining disk space (3366262407168 B)
[2025-02-27 12:56:20] 2025-02-27 11:56:02,929 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-27 12:56:20] 2025-02-27 11:56:02,929 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-27 12:56:20] 2025-02-27 11:56:02,929 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-27 12:56:20] 2025-02-27 11:56:02,930 | INFO     | aborting loop
[2025-02-27 12:56:20] 2025-02-27 11:56:03,049 | INFO     | all job control threads have been joined
[2025-02-27 12:56:20] 2025-02-27 11:56:03,072 | INFO     | found 0 job(s) in 20 queues
[2025-02-27 12:56:20] 2025-02-27 11:56:03,073 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-27 12:56:20] 2025-02-27 11:56:03,073 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-27 12:56:20] 2025-02-27 11:56:03,277 | INFO     | all data control threads have been joined
[2025-02-27 12:56:20] 2025-02-27 11:56:03,291 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-27 12:56:20] 2025-02-27 11:56:03,459 | INFO     | all payload control threads have been joined
[2025-02-27 12:56:20] 2025-02-27 11:56:03,622 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-27 12:56:20] 2025-02-27 11:56:03,935 | INFO     | [job] retrieve thread has finished
[2025-02-27 12:56:20] 2025-02-27 11:56:03,935 | INFO     | [job] job monitor thread has finished
[2025-02-27 12:56:20] 2025-02-27 11:56:04,055 | INFO     | [job] control thread has finished
[2025-02-27 12:56:20] 2025-02-27 11:56:04,163 | INFO     | [payload] execute_payloads thread has finished
[2025-02-27 12:56:20] 2025-02-27 11:56:04,173 | INFO     | [job] validate thread has finished
[2025-02-27 12:56:20] 2025-02-27 11:56:04,278 | INFO     | [data] control thread has finished
[2025-02-27 12:56:20] 2025-02-27 11:56:04,465 | INFO     | [payload] control thread has finished
[2025-02-27 12:56:20] 2025-02-27 11:56:04,707 | INFO     | [payload] validate_pre thread has finished
[2025-02-27 12:56:20] 2025-02-27 11:56:04,714 | INFO     | [data] copytool_in thread has finished
[2025-02-27 12:56:20] 2025-02-27 11:56:04,796 | INFO     | [job] create_data_payload thread has finished
[2025-02-27 12:56:20] 2025-02-27 11:56:05,056 | INFO     | [payload] validate_post thread has finished
[2025-02-27 12:56:20] 2025-02-27 11:56:05,297 | INFO     | [data] copytool_out thread has finished
[2025-02-27 12:56:20] 2025-02-27 11:56:05,340 | INFO     | [payload] failed_post thread has finished
[2025-02-27 12:56:20] 2025-02-27 11:56:05,680 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-27 12:56:20] 2025-02-27 11:56:06,684 | INFO     | [job] queue monitor thread has finished
[2025-02-27 12:56:20] 2025-02-27 11:56:07,628 | INFO     | [data] queue_monitor thread has finished
[2025-02-27 12:56:20] 2025-02-27 11:56:13,818 | INFO     | job.realtimelogging is not enabled
[2025-02-27 12:56:20] 2025-02-27 11:56:14,820 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-27 12:56:20] 2025-02-27 11:56:15,133 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23142472161088)>', '<ExcThread(monitor, started 23142233757440)>']
[2025-02-27 12:56:20] 2025-02-27 11:56:16,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-27 12:56:20] 2025-02-27 11:56:16,132 | INFO     | [monitor] control thread has ended
[2025-02-27 12:56:20] 2025-02-27 11:56:20,154 | INFO     | all workflow threads have been joined
[2025-02-27 12:56:20] 2025-02-27 11:56:20,155 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-27 12:56:20] 2025-02-27 11:56:20,155 | INFO     | traces error code: 0
[2025-02-27 12:56:20] 2025-02-27 11:56:20,155 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-27 12:56:20] 2025-02-27 11:56:20,321 [wrapper] ==== pilot stdout END ====
[2025-02-27 12:56:20] 2025-02-27 11:56:20,327 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-27 12:56:20] 2025-02-27 11:56:20,330 [wrapper] pilotpid: 3947835
[2025-02-27 12:56:20] 2025-02-27 11:56:20,334 [wrapper] Pilot exit status: 0
[2025-02-27 12:56:20] 2025-02-27 11:56:20,348 [wrapper] pandaids: 6524371865
[2025-02-27 12:56:20] 2025-02-27 11:56:20,469 [wrapper] cleanup supervisor_pilot  785915 3947836
[2025-02-27 12:56:20] 2025-02-27 11:56:20,473 [wrapper] Test setup, not cleaning
[2025-02-27 12:56:20] 2025-02-27 11:56:20,481 [wrapper] apfmon messages muted
[2025-02-27 12:56:20] 2025-02-27 11:56:20,485 [wrapper] ==== wrapper stdout END ====
[2025-02-27 12:56:20] 2025-02-27 11:56:20,489 [wrapper] ==== wrapper stderr END ====
[2025-02-27 12:56:20]  *** Error codes and diagnostics ***
[2025-02-27 12:56:20]     "exeErrorCode": 0,
[2025-02-27 12:56:20]     "exeErrorDiag": "",
[2025-02-27 12:56:20]     "pilotErrorCode": 0,
[2025-02-27 12:56:20]     "pilotErrorDiag": "",
[2025-02-27 12:56:20]  *** Listing of results directory ***
[2025-02-27 12:56:20] total 667456
[2025-02-27 12:56:20] -rw-r--r-- 1 boinc boinc    491065 Feb 23 11:53 pilot3.tar.gz
[2025-02-27 12:56:20] -rw-r--r-- 1 boinc boinc      5118 Feb 23 12:05 queuedata.json
[2025-02-27 12:56:20] -rwx------ 1 boinc boinc     35865 Feb 23 12:05 runpilot2-wrapper.sh
[2025-02-27 12:56:20] -rw-r--r-- 1 boinc boinc       100 Feb 27 08:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-27 12:56:20] -rwxr-xr-x 1 boinc boinc      7986 Feb 27 08:52 run_atlas
[2025-02-27 12:56:20] -rw-r--r-- 1 boinc boinc       105 Feb 27 08:52 job.xml
[2025-02-27 12:56:20] -rw-r--r-- 2 boinc boinc 344540773 Feb 27 08:52 EVNT.43078917._002182.pool.root.1
[2025-02-27 12:56:20] -rw-r--r-- 1 boinc boinc      6677 Feb 27 08:52 init_data.xml
[2025-02-27 12:56:20] -rw-r--r-- 2 boinc boinc     17569 Feb 27 08:52 start_atlas.sh
[2025-02-27 12:56:20] drwxrwx--x 2 boinc boinc      4096 Feb 27 08:52 shared
[2025-02-27 12:56:20] -rw-r--r-- 2 boinc boinc    503558 Feb 27 08:52 input.tar.gz
[2025-02-27 12:56:20] -rw-r--r-- 1 boinc boinc         0 Feb 27 08:52 boinc_lockfile
[2025-02-27 12:56:20] -rw-r--r-- 1 boinc boinc      2548 Feb 27 08:52 pandaJob.out
[2025-02-27 12:56:20] -rw------- 1 boinc boinc       424 Feb 27 08:52 setup.sh.local
[2025-02-27 12:56:20] -rw------- 1 boinc boinc    989117 Feb 27 08:52 agis_schedconf.cvmfs.json
[2025-02-27 12:56:20] drwx------ 4 boinc boinc      4096 Feb 27 08:52 pilot3
[2025-02-27 12:56:20] -rw------- 1 boinc boinc 331373039 Feb 27 12:55 HITS.43078919._091091.pool.root.1
[2025-02-27 12:56:20] -rw------- 1 boinc boinc        95 Feb 27 12:55 pilot_heartbeat.json
[2025-02-27 12:56:20] -rw-r--r-- 1 boinc boinc       531 Feb 27 12:55 boinc_task_state.xml
[2025-02-27 12:56:20] -rw------- 1 boinc boinc      1023 Feb 27 12:55 memory_monitor_summary.json
[2025-02-27 12:56:20] -rw------- 1 boinc boinc   1569202 Feb 27 12:55 agis_ddmendpoints.agis.ALL.json
[2025-02-27 12:56:20] -rw------- 1 boinc boinc    351459 Feb 27 12:55 log.43078919._091091.job.log.tgz.1
[2025-02-27 12:56:20] -rw------- 1 boinc boinc      7691 Feb 27 12:56 heartbeat.json
[2025-02-27 12:56:20] -rw-r--r-- 1 boinc boinc      8192 Feb 27 12:56 boinc_mmap_file
[2025-02-27 12:56:20] -rw-r--r-- 1 boinc boinc        28 Feb 27 12:56 wrapper_checkpoint.txt
[2025-02-27 12:56:20] -rw------- 1 boinc boinc      4298 Feb 27 12:56 pilotlog.txt
[2025-02-27 12:56:20] -rw------- 1 boinc boinc   1531617 Feb 27 12:56 log.43078919._091091.job.log.1
[2025-02-27 12:56:20] -rw------- 1 boinc boinc       357 Feb 27 12:56 output.list
[2025-02-27 12:56:20] -rw-r--r-- 1 boinc boinc       620 Feb 27 12:56 runtime_log
[2025-02-27 12:56:20] -rw------- 1 boinc boinc   1904640 Feb 27 12:56 result.tar.gz
[2025-02-27 12:56:20] -rw-r--r-- 1 boinc boinc     11424 Feb 27 12:56 runtime_log.err
[2025-02-27 12:56:20] -rw------- 1 boinc boinc       664 Feb 27 12:56 F6RMDm2yO66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm6PvKDm5gMLRm.diag
[2025-02-27 12:56:20] -rw-r--r-- 1 boinc boinc     21998 Feb 27 12:56 stderr.txt
[2025-02-27 12:56:20] HITS file was successfully produced:
[2025-02-27 12:56:20] -rw------- 1 boinc boinc 331373039 Feb 27 12:55 shared/HITS.pool.root.1
[2025-02-27 12:56:20]  *** Contents of shared directory: ***
[2025-02-27 12:56:20] total 662456
[2025-02-27 12:56:20] -rw-r--r-- 2 boinc boinc 344540773 Feb 27 08:52 ATLAS.root_0
[2025-02-27 12:56:20] -rw-r--r-- 2 boinc boinc     17569 Feb 27 08:52 start_atlas.sh
[2025-02-27 12:56:20] -rw-r--r-- 2 boinc boinc    503558 Feb 27 08:52 input.tar.gz
[2025-02-27 12:56:20] -rw------- 1 boinc boinc 331373039 Feb 27 12:55 HITS.pool.root.1
[2025-02-27 12:56:20] -rw------- 1 boinc boinc   1904640 Feb 27 12:56 result.tar.gz
12:56:21 (3943866): run_atlas exited; CPU time 54618.204810
12:56:21 (3943866): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN