Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:15:09 (3897): wrapper (7.7.26015): starting
10:15:09 (3897): wrapper: running run_atlas (--nthreads 12)
[2025-02-23 10:15:09] Arguments: --nthreads 12
[2025-02-23 10:15:09] Threads: 12
[2025-02-23 10:15:09] Checking for CVMFS
[2025-02-23 10:15:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-23 10:15:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-23 10:15:09] Running cvmfs_config stat atlas.cern.ch
[2025-02-23 10:15:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-23 10:15:10] 2.11.2.0 2080 169696 93856 142979 0 197 14285192 18432001 4669 130560 0 23455744 99.233 46395222 37851 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-23 10:15:10] CVMFS is ok
[2025-02-23 10:15:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 10:15:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 10:15:10] Further information can be found at the LHC@home message board.
[2025-02-23 10:15:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 10:15:10] Checking for apptainer binary...
[2025-02-23 10:15:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-23 10:15:10] Running /usr/bin/apptainer --version
[2025-02-23 10:15:11] apptainer version 1.3.2-1.el7
[2025-02-23 10:15:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 10:15:18] c-206-5.aglt2.org
[2025-02-23 10:15:18] apptainer works
[2025-02-23 10:15:18] Set ATHENA_PROC_NUMBER=12
[2025-02-23 10:15:18] Set ATHENA_CORE_NUMBER=12
[2025-02-23 10:15:18] Starting ATLAS job with PandaID=6524179625
[2025-02-23 10:15:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-23 23:08:38]  *** The last 200 lines of the pilot log: ***
[2025-02-23 23:08:38] 2025-02-24 04:08:12,632 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-23 23:08:38] 2025-02-24 04:08:12,633 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-23 23:08:38] 2025-02-24 04:08:12,633 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-23 23:08:38] 2025-02-24 04:08:12,883 | INFO     | fitting pss+swap vs Time
[2025-02-23 23:08:38] 2025-02-24 04:08:12,899 | INFO     | model: linear, x: [1740323828.0, 1740323889.0, 1740323950.0, 1740324011.0, 1740324072.0, 1740324133.0, 1740324194.0, 1740324255.0, 1740324316.0, 1740324377.0, 1740
[2025-02-23 23:08:38] 2025-02-24 04:08:12,899 | INFO     | sum of square deviations: 134519100749.08296
[2025-02-23 23:08:38] 2025-02-24 04:08:13,152 | INFO     | sum of deviations: 539709347384.7256
[2025-02-23 23:08:38] 2025-02-24 04:08:13,152 | INFO     | mean x: 1740346886.4464993
[2025-02-23 23:08:38] 2025-02-24 04:08:13,152 | INFO     | mean y: 2706879.104359313
[2025-02-23 23:08:38] 2025-02-24 04:08:13,153 | INFO     | -- intersect: -6979806957.790156
[2025-02-23 23:08:38] 2025-02-24 04:08:13,153 | INFO     | intersect: -6979806957.790156
[2025-02-23 23:08:38] 2025-02-24 04:08:13,154 | INFO     | chi2: 10.196562420226678
[2025-02-23 23:08:38] 2025-02-24 04:08:13,155 | INFO     | model: linear, x: [1740323828.0, 1740323889.0, 1740323950.0, 1740324011.0, 1740324072.0, 1740324133.0, 1740324194.0, 1740324255.0, 1740324316.0, 1740324377.0, 1740
[2025-02-23 23:08:38] 2025-02-24 04:08:13,156 | INFO     | sum of square deviations: 131871331270.97787
[2025-02-23 23:08:38] 2025-02-24 04:08:13,175 | INFO     | sum of deviations: 826787440946.1011
[2025-02-23 23:08:38] 2025-02-24 04:08:13,175 | INFO     | mean x: 1740346733.9481382
[2025-02-23 23:08:38] 2025-02-24 04:08:13,175 | INFO     | mean y: 2723414.6436170214
[2025-02-23 23:08:38] 2025-02-24 04:08:13,175 | INFO     | -- intersect: -10908646089.643456
[2025-02-23 23:08:38] 2025-02-24 04:08:13,176 | INFO     | intersect: -10908646089.643456
[2025-02-23 23:08:38] 2025-02-24 04:08:13,177 | INFO     | chi2: 5.954947362625082
[2025-02-23 23:08:38] 2025-02-24 04:08:13,177 | INFO     | current chi2=5.954947362625082 (change=41.5984807702212 %)
[2025-02-23 23:08:38] 2025-02-24 04:08:13,178 | INFO     | model: linear, x: [1740323828.0, 1740323889.0, 1740323950.0, 1740324011.0, 1740324072.0, 1740324133.0, 1740324194.0, 1740324255.0, 1740324316.0, 1740324377.0, 1740
[2025-02-23 23:08:38] 2025-02-24 04:08:13,178 | INFO     | sum of square deviations: 129258447446.66136
[2025-02-23 23:08:38] 2025-02-24 04:08:13,527 | INFO     | sum of deviations: 819042495871.7515
[2025-02-23 23:08:38] 2025-02-24 04:08:13,528 | INFO     | mean x: 1740346581.4471219
[2025-02-23 23:08:38] 2025-02-24 04:08:13,549 | INFO     | mean y: 2722962.7911646585
[2025-02-23 23:08:38] 2025-02-24 04:08:13,549 | INFO     | -- intersect: -11024933920.821964
[2025-02-23 23:08:38] 2025-02-24 04:08:13,550 | INFO     | intersect: -11024933920.821964
[2025-02-23 23:08:38] 2025-02-24 04:08:13,571 | INFO     | chi2: 5.954761365912708
[2025-02-23 23:08:38] 2025-02-24 04:08:13,571 | INFO     | current chi2=5.954761365912708 (change=0.0031233980931794246 %)
[2025-02-23 23:08:38] 2025-02-24 04:08:13,572 | INFO     | right removable region: 746
[2025-02-23 23:08:38] 2025-02-24 04:08:13,611 | INFO     | model: linear, x: [1740324133.0, 1740324194.0, 1740324255.0, 1740324316.0, 1740324377.0, 1740324438.0, 1740324499.0, 1740324560.0, 1740324621.0, 1740324682.0, 1740
[2025-02-23 23:08:38] 2025-02-24 04:08:13,612 | INFO     | sum of square deviations: 131871171268.07974
[2025-02-23 23:08:38] 2025-02-24 04:08:13,840 | INFO     | sum of deviations: 307519774345.90607
[2025-02-23 23:08:38] 2025-02-24 04:08:13,840 | INFO     | mean x: 1740347038.9494681
[2025-02-23 23:08:38] 2025-02-24 04:08:13,841 | INFO     | mean y: 2720242.392287234
[2025-02-23 23:08:38] 2025-02-24 04:08:13,841 | INFO     | -- intersect: -4055718941.5088015
[2025-02-23 23:08:38] 2025-02-24 04:08:13,841 | INFO     | intersect: -4055718941.5088015
[2025-02-23 23:08:38] 2025-02-24 04:08:13,842 | INFO     | chi2: 7.2930692728314135
[2025-02-23 23:08:38] 2025-02-24 04:08:13,843 | INFO     | current chi2=7.2930692728314135 (change=28.475215741686384 %)
[2025-02-23 23:08:38] 2025-02-24 04:08:13,843 | INFO     | model: linear, x: [1740324438.0, 1740324499.0, 1740324560.0, 1740324621.0, 1740324682.0, 1740324743.0, 1740324804.0, 1740324865.0, 1740324926.0, 1740324987.0, 1740
[2025-02-23 23:08:38] 2025-02-24 04:08:13,844 | INFO     | sum of square deviations: 129258219187.0645
[2025-02-23 23:08:38] 2025-02-24 04:08:14,123 | INFO     | sum of deviations: 135896980573.45636
[2025-02-23 23:08:38] 2025-02-24 04:08:14,124 | INFO     | mean x: 1740347191.4524765
[2025-02-23 23:08:38] 2025-02-24 04:08:14,124 | INFO     | mean y: 2730257.9424364124
[2025-02-23 23:08:38] 2025-02-24 04:08:14,124 | INFO     | -- intersect: -1827001962.9974837
[2025-02-23 23:08:38] 2025-02-24 04:08:14,124 | INFO     | intersect: -1827001962.9974837
[2025-02-23 23:08:38] 2025-02-24 04:08:14,125 | INFO     | chi2: 5.808521503040663
[2025-02-23 23:08:38] 2025-02-24 04:08:14,126 | INFO     | current chi2=5.808521503040663 (change=20.355596721411633 %)
[2025-02-23 23:08:38] 2025-02-24 04:08:14,126 | INFO     | left removable region: 20
[2025-02-23 23:08:38] 2025-02-24 04:08:14,127 | INFO     | model: linear, x: [1740325048.0, 1740325109.0, 1740325170.0, 1740325231.0, 1740325292.0, 1740325353.0, 1740325414.0, 1740325475.0, 1740325536.0, 1740325597.0, 1740
[2025-02-23 23:08:38] 2025-02-24 04:08:14,128 | INFO     | sum of square deviations: 118660799315.84169
[2025-02-23 23:08:38] 2025-02-24 04:08:14,149 | INFO     | sum of deviations: 223550762912.59927
[2025-02-23 23:08:38] 2025-02-24 04:08:14,150 | INFO     | mean x: 1740347160.960055
[2025-02-23 23:08:38] 2025-02-24 04:08:14,150 | INFO     | mean y: 2758589.020661157
[2025-02-23 23:08:38] 2025-02-24 04:08:14,150 | INFO     | -- intersect: -3275964778.835972
[2025-02-23 23:08:38] 2025-02-24 04:08:14,150 | INFO     | intersect: -3275964778.835972
[2025-02-23 23:08:38] 2025-02-24 04:08:14,152 | INFO     | chi2: 0.2913464453285314
[2025-02-23 23:08:38] 2025-02-24 04:08:14,152 | INFO     | -- intersect: -3275964778.835972
[2025-02-23 23:08:38] 2025-02-24 04:08:14,152 | INFO     | current memory leak: 1.88 B/s (using 726 data points, chi2=0.29)
[2025-02-23 23:08:38] 2025-02-24 04:08:14,153 | INFO     | ..............................
[2025-02-23 23:08:38] 2025-02-24 04:08:14,153 | INFO     | . Timing measurements:
[2025-02-23 23:08:38] 2025-02-24 04:08:14,154 | INFO     | . get job = 0 s
[2025-02-23 23:08:38] 2025-02-24 04:08:14,154 | INFO     | . initial setup = 3 s
[2025-02-23 23:08:38] 2025-02-24 04:08:14,154 | INFO     | . payload setup = 22 s
[2025-02-23 23:08:38] 2025-02-24 04:08:14,154 | INFO     | . stage-in = 0 s
[2025-02-23 23:08:38] 2025-02-24 04:08:14,154 | INFO     | . payload execution = 46195 s
[2025-02-23 23:08:38] 2025-02-24 04:08:14,154 | INFO     | . stage-out = 25 s
[2025-02-23 23:08:38] 2025-02-24 04:08:14,155 | INFO     | . log creation = 2 s
[2025-02-23 23:08:38] 2025-02-24 04:08:14,155 | INFO     | ..............................
[2025-02-23 23:08:38] 2025-02-24 04:08:14,373 | INFO     | 
[2025-02-23 23:08:38] 2025-02-24 04:08:14,373 | INFO     | job summary report
[2025-02-23 23:08:38] 2025-02-24 04:08:14,373 | INFO     | --------------------------------------------------
[2025-02-23 23:08:38] 2025-02-24 04:08:14,374 | INFO     | PanDA job id: 6524179625
[2025-02-23 23:08:38] 2025-02-24 04:08:14,374 | INFO     | task id: 43078919
[2025-02-23 23:08:38] 2025-02-24 04:08:14,374 | INFO     | errors: (none)
[2025-02-23 23:08:38] 2025-02-24 04:08:14,374 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-23 23:08:38] 2025-02-24 04:08:14,375 | INFO     | pilot state: finished 
[2025-02-23 23:08:38] 2025-02-24 04:08:14,375 | INFO     | transexitcode: 0
[2025-02-23 23:08:38] 2025-02-24 04:08:14,375 | INFO     | exeerrorcode: 0
[2025-02-23 23:08:38] 2025-02-24 04:08:14,375 | INFO     | exeerrordiag: 
[2025-02-23 23:08:38] 2025-02-24 04:08:14,375 | INFO     | exitcode: 0
[2025-02-23 23:08:38] 2025-02-24 04:08:14,376 | INFO     | exitmsg: OK
[2025-02-23 23:08:38] 2025-02-24 04:08:14,376 | INFO     | cpuconsumptiontime: 196543 s
[2025-02-23 23:08:38] 2025-02-24 04:08:14,376 | INFO     | nevents: 400
[2025-02-23 23:08:38] 2025-02-24 04:08:14,376 | INFO     | neventsw: 0
[2025-02-23 23:08:38] 2025-02-24 04:08:14,376 | INFO     | pid: 15429
[2025-02-23 23:08:38] 2025-02-24 04:08:14,376 | INFO     | pgrp: 15429
[2025-02-23 23:08:38] 2025-02-24 04:08:14,377 | INFO     | corecount: 12
[2025-02-23 23:08:38] 2025-02-24 04:08:14,377 | INFO     | event service: False
[2025-02-23 23:08:38] 2025-02-24 04:08:14,377 | INFO     | sizes: {0: 2382534, 1: 2383390, 2: 2383390, 12: 2383624, 13: 2383652, 24: 2383708, 46224: 2428161, 46225: 2428160, 46252: 2437157, 46253: 2437213, 46310: 2437383}
[2025-02-23 23:08:38] 2025-02-24 04:08:14,377 | INFO     | --------------------------------------------------
[2025-02-23 23:08:38] 2025-02-24 04:08:14,377 | INFO     | 
[2025-02-23 23:08:38] 2025-02-24 04:08:14,378 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-23 23:08:38] 2025-02-24 04:08:14,407 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-23 23:08:38] 2025-02-24 04:08:14,407 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-23 23:08:38] 2025-02-24 04:08:14,407 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-23 23:08:38] 2025-02-24 04:08:14,408 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-23 23:08:38] 2025-02-24 04:08:14,408 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-23 23:08:38] 2025-02-24 04:08:14,408 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-23 23:08:38] 2025-02-24 04:08:14,408 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-23 23:08:38] 2025-02-24 04:08:14,408 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-23 23:08:38] 2025-02-24 04:08:14,408 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-23 23:08:38] 2025-02-24 04:08:14,409 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-23 23:08:38] 2025-02-24 04:08:14,409 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-23 23:08:38] 2025-02-24 04:08:14,409 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-23 23:08:38] 2025-02-24 04:08:14,409 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-23 23:08:38] 2025-02-24 04:08:14,410 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-23 23:08:38] 2025-02-24 04:08:14,410 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-23 23:08:38] 2025-02-24 04:08:14,410 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-23 23:08:38] 2025-02-24 04:08:14,410 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-23 23:08:38] 2025-02-24 04:08:14,410 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-23 23:08:38] 2025-02-24 04:08:14,410 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-23 23:08:38] 2025-02-24 04:08:14,411 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-23 23:08:38] 2025-02-24 04:08:14,411 | INFO     | job 6524179625 has completed (purged errors)
[2025-02-23 23:08:38] 2025-02-24 04:08:14,411 | INFO     | overall cleanup function is called
[2025-02-23 23:08:38] 2025-02-24 04:08:15,420 | INFO     | --- collectZombieJob: --- 10, [15429]
[2025-02-23 23:08:38] 2025-02-24 04:08:15,420 | INFO     | zombie collector waiting for pid 15429
[2025-02-23 23:08:38] 2025-02-24 04:08:15,420 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-23 23:08:38] 2025-02-24 04:08:15,421 | INFO     | collected zombie processes
[2025-02-23 23:08:38] 2025-02-24 04:08:15,421 | INFO     | will attempt to kill all subprocesses of pid=15429
[2025-02-23 23:08:38] 2025-02-24 04:08:16,512 | INFO     | process IDs to be killed: [15429] (in reverse order)
[2025-02-23 23:08:38] 2025-02-24 04:08:17,558 | WARNING  | found no corresponding commands to process id(s)
[2025-02-23 23:08:38] 2025-02-24 04:08:17,559 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-23 23:08:38] 2025-02-24 04:08:17,714 | INFO     | did not find any defunct processes belonging to 15429
[2025-02-23 23:08:38] 2025-02-24 04:08:17,841 | INFO     | did not find any defunct processes belonging to 15429
[2025-02-23 23:08:38] 2025-02-24 04:08:17,854 | INFO     | ready for new job
[2025-02-23 23:08:38] 2025-02-24 04:08:17,854 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-23 23:08:38] 2025-02-24 04:08:17,929 | INFO     | **************************************
[2025-02-23 23:08:38] 2025-02-24 04:08:17,929 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-23 23:08:38] 2025-02-24 04:08:17,930 | INFO     | **************************************
[2025-02-23 23:08:38] 2025-02-24 04:08:17,944 | INFO     | 
[2025-02-23 23:08:38] 2025-02-24 04:08:17,972 | INFO     | architecture information:
[2025-02-23 23:08:38] 2025-02-24 04:08:17,990 | INFO     | executing command: cat /etc/os-release
[2025-02-23 23:08:38] 2025-02-24 04:08:18,338 | INFO     | cat /etc/os-release:
[2025-02-23 23:08:38] NAME="CentOS Linux"
[2025-02-23 23:08:38] VERSION="7 (Core)"
[2025-02-23 23:08:38] ID="centos"
[2025-02-23 23:08:38] ID_LIKE="rhel fedora"
[2025-02-23 23:08:38] VERSION_ID="7"
[2025-02-23 23:08:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-23 23:08:38] ANSI_COLOR="0;31"
[2025-02-23 23:08:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-23 23:08:38] HOME_URL="https://www.centos.org/"
[2025-02-23 23:08:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-23 23:08:38] 
[2025-02-23 23:08:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-23 23:08:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-23 23:08:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-23 23:08:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-23 23:08:38] 
[2025-02-23 23:08:38] 2025-02-24 04:08:18,338 | INFO     | **************************************
[2025-02-23 23:08:38] 2025-02-24 04:08:18,840 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-23 23:08:38] 2025-02-24 04:08:19,194 | INFO     | sufficient remaining disk space (28845277184 B)
[2025-02-23 23:08:38] 2025-02-24 04:08:19,195 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-23 23:08:38] 2025-02-24 04:08:19,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-23 23:08:38] 2025-02-24 04:08:19,196 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-23 23:08:38] 2025-02-24 04:08:19,196 | INFO     | aborting loop
[2025-02-23 23:08:38] 2025-02-24 04:08:19,390 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-23 23:08:38] 2025-02-24 04:08:19,840 | INFO     | found 0 job(s) in 20 queues
[2025-02-23 23:08:38] 2025-02-24 04:08:19,840 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-23 23:08:38] 2025-02-24 04:08:19,840 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-23 23:08:38] 2025-02-24 04:08:20,099 | INFO     | all data control threads have been joined
[2025-02-23 23:08:38] 2025-02-24 04:08:20,129 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-23 23:08:38] 2025-02-24 04:08:20,200 | INFO     | [job] retrieve thread has finished
[2025-02-23 23:08:38] 2025-02-24 04:08:20,217 | INFO     | [job] job monitor thread has finished
[2025-02-23 23:08:38] 2025-02-24 04:08:20,266 | INFO     | [job] create_data_payload thread has finished
[2025-02-23 23:08:38] 2025-02-24 04:08:20,339 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-23 23:08:38] 2025-02-24 04:08:20,386 | INFO     | [job] validate thread has finished
[2025-02-23 23:08:38] 2025-02-24 04:08:20,405 | INFO     | [payload] validate_pre thread has finished
[2025-02-23 23:08:38] 2025-02-24 04:08:20,424 | INFO     | [job] queue monitor thread has finished
[2025-02-23 23:08:38] 2025-02-24 04:08:20,440 | INFO     | [payload] execute_payloads thread has finished
[2025-02-23 23:08:38] 2025-02-24 04:08:20,455 | INFO     | all payload control threads have been joined
[2025-02-23 23:08:38] 2025-02-24 04:08:20,556 | INFO     | all job control threads have been joined
[2025-02-23 23:08:38] 2025-02-24 04:08:20,940 | INFO     | [data] copytool_in thread has finished
[2025-02-23 23:08:38] 2025-02-24 04:08:21,105 | INFO     | [data] control thread has finished
[2025-02-23 23:08:38] 2025-02-24 04:08:21,460 | INFO     | [payload] control thread has finished
[2025-02-23 23:08:38] 2025-02-24 04:08:21,544 | INFO     | [payload] validate_post thread has finished
[2025-02-23 23:08:38] 2025-02-24 04:08:21,559 | INFO     | [payload] failed_post thread has finished
[2025-02-23 23:08:38] 2025-02-24 04:08:21,564 | INFO     | [job] control thread has finished
[2025-02-23 23:08:38] 2025-02-24 04:08:22,136 | INFO     | [data] copytool_out thread has finished
[2025-02-23 23:08:38] 2025-02-24 04:08:22,220 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-23 23:08:38] 2025-02-24 04:08:26,234 | INFO     | [data] queue_monitor thread has finished
[2025-02-23 23:08:38] 2025-02-24 04:08:26,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140516084741952)>', '<ExcThread(monitor, started 140515223795456)>']
[2025-02-23 23:08:38] 2025-02-24 04:08:26,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-23 23:08:38] 2025-02-24 04:08:26,886 | INFO     | [monitor] control thread has ended
[2025-02-23 23:08:38] 2025-02-24 04:08:31,310 | INFO     | all workflow threads have been joined
[2025-02-23 23:08:38] 2025-02-24 04:08:31,317 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-23 23:08:38] 2025-02-24 04:08:31,354 | INFO     | traces error code: 0
[2025-02-23 23:08:38] 2025-02-24 04:08:31,354 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-23 23:08:38] 2025-02-24 04:08:33,504 [wrapper] ==== pilot stdout END ====
[2025-02-23 23:08:38] 2025-02-24 04:08:33,580 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-23 23:08:38] 2025-02-24 04:08:33,664 [wrapper] pilotpid: 8005
[2025-02-23 23:08:38] 2025-02-24 04:08:33,740 [wrapper] Pilot exit status: 0
[2025-02-23 23:08:38] 2025-02-24 04:08:33,996 [wrapper] pandaids: 6524179625
[2025-02-23 23:08:38] 2025-02-24 04:08:34,430 [wrapper] cleanup supervisor_pilot 31909 8006
[2025-02-23 23:08:38] 2025-02-24 04:08:34,544 [wrapper] Test setup, not cleaning
[2025-02-23 23:08:38] 2025-02-24 04:08:34,694 [wrapper] apfmon messages muted
[2025-02-23 23:08:38] 2025-02-24 04:08:34,764 [wrapper] ==== wrapper stdout END ====
[2025-02-23 23:08:38] 2025-02-24 04:08:34,845 [wrapper] ==== wrapper stderr END ====
[2025-02-23 23:08:38]  *** Error codes and diagnostics ***
[2025-02-23 23:08:38]     "exeErrorCode": 0,
[2025-02-23 23:08:38]     "exeErrorDiag": "",
[2025-02-23 23:08:38]     "pilotErrorCode": 0,
[2025-02-23 23:08:38]     "pilotErrorDiag": "",
[2025-02-23 23:08:38]  *** Listing of results directory ***
[2025-02-23 23:08:38] total 670772
[2025-02-23 23:08:38] -rw-r--r-- 1 boincer umatlas    491065 Feb 23 04:19 pilot3.tar.gz
[2025-02-23 23:08:38] -rw-r--r-- 1 boincer umatlas      5118 Feb 23 04:46 queuedata.json
[2025-02-23 23:08:38] -rwx------ 1 boincer umatlas     35865 Feb 23 04:49 runpilot2-wrapper.sh
[2025-02-23 23:08:38] -rw-r--r-- 1 boincer umatlas       100 Feb 23 10:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-23 23:08:38] -rwxr-xr-x 1 boincer umatlas      7986 Feb 23 10:15 run_atlas
[2025-02-23 23:08:38] -rw-r--r-- 1 boincer umatlas       105 Feb 23 10:15 job.xml
[2025-02-23 23:08:38] -rw-r--r-- 2 boincer umatlas 342455801 Feb 23 10:15 EVNT.43078917._001859.pool.root.1
[2025-02-23 23:08:38] -rw-r--r-- 2 boincer umatlas     17569 Feb 23 10:15 start_atlas.sh
[2025-02-23 23:08:38] drwxrwx--x 2 boincer umatlas      4096 Feb 23 10:15 shared
[2025-02-23 23:08:38] -rw-r--r-- 2 boincer umatlas    503559 Feb 23 10:15 input.tar.gz
[2025-02-23 23:08:38] -rw-r--r-- 1 boincer umatlas         0 Feb 23 10:15 boinc_lockfile
[2025-02-23 23:08:38] -rw-r--r-- 1 boincer umatlas      2547 Feb 23 10:15 pandaJob.out
[2025-02-23 23:08:38] -rw------- 1 boincer umatlas       467 Feb 23 10:15 setup.sh.local
[2025-02-23 23:08:38] -rw------- 1 boincer umatlas    987744 Feb 23 10:15 agis_schedconf.cvmfs.json
[2025-02-23 23:08:38] drwx------ 4 boincer umatlas      4096 Feb 23 10:15 pilot3
[2025-02-23 23:08:38] -rw------- 1 boincer umatlas 327522768 Feb 23 22:59 HITS.43078919._090922.pool.root.1
[2025-02-23 23:08:38] -rw-r--r-- 1 boincer umatlas       533 Feb 23 23:01 boinc_task_state.xml
[2025-02-23 23:08:38] -rw-r--r-- 1 boincer umatlas      5952 Feb 23 23:03 init_data.xml
[2025-02-23 23:08:38] -rw------- 1 boincer umatlas      1069 Feb 23 23:06 memory_monitor_summary.json
[2025-02-23 23:08:38] -rw------- 1 boincer umatlas   1582569 Feb 23 23:07 agis_ddmendpoints.agis.ALL.json
[2025-02-23 23:08:38] -rw------- 1 boincer umatlas    865458 Feb 23 23:07 log.43078919._090922.job.log.tgz.1
[2025-02-23 23:08:38] -rw------- 1 boincer umatlas        95 Feb 23 23:07 pilot_heartbeat.json
[2025-02-23 23:08:38] -rw------- 1 boincer umatlas      7806 Feb 23 23:08 heartbeat.json
[2025-02-23 23:08:38] -rw-r--r-- 1 boincer umatlas      8192 Feb 23 23:08 boinc_mmap_file
[2025-02-23 23:08:38] -rw-r--r-- 1 boincer umatlas        29 Feb 23 23:08 wrapper_checkpoint.txt
[2025-02-23 23:08:38] -rw------- 1 boincer umatlas      4215 Feb 23 23:08 pilotlog.txt
[2025-02-23 23:08:38] -rw------- 1 boincer umatlas   5675153 Feb 23 23:08 log.43078919._090922.job.log.1
[2025-02-23 23:08:38] -rw------- 1 boincer umatlas       357 Feb 23 23:08 output.list
[2025-02-23 23:08:38] -rw-r--r-- 1 boincer umatlas       620 Feb 23 23:08 runtime_log
[2025-02-23 23:08:38] -rw------- 1 boincer umatlas   6563840 Feb 23 23:08 result.tar.gz
[2025-02-23 23:08:38] -rw-r--r-- 1 boincer umatlas     11416 Feb 23 23:08 runtime_log.err
[2025-02-23 23:08:38] -rw------- 1 boincer umatlas       665 Feb 23 23:08 2SLODmnmN66n9Rq4apOajLDm4fhM0noT9bVoFjIUDm4qeKDmpMfmMo.diag
[2025-02-23 23:08:38] -rw-r--r-- 1 boincer umatlas     21615 Feb 23 23:08 stderr.txt
[2025-02-23 23:08:49] HITS file was successfully produced:
[2025-02-23 23:08:49] -rw------- 1 boincer umatlas 327522768 Feb 23 22:59 shared/HITS.pool.root.1
[2025-02-23 23:08:49]  *** Contents of shared directory: ***
[2025-02-23 23:08:49] total 661208
[2025-02-23 23:08:49] -rw-r--r-- 2 boincer umatlas 342455801 Feb 23 10:15 ATLAS.root_0
[2025-02-23 23:08:49] -rw-r--r-- 2 boincer umatlas     17569 Feb 23 10:15 start_atlas.sh
[2025-02-23 23:08:49] -rw-r--r-- 2 boincer umatlas    503559 Feb 23 10:15 input.tar.gz
[2025-02-23 23:08:49] -rw------- 1 boincer umatlas 327522768 Feb 23 22:59 HITS.pool.root.1
[2025-02-23 23:08:49] -rw------- 1 boincer umatlas   6563840 Feb 23 23:08 result.tar.gz
23:08:50 (3897): run_atlas exited; CPU time 196233.972097
23:08:50 (3897): called boinc_finish(0)

</stderr_txt>
]]>

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