Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-23 09:04:03 (31082): Detected: vboxwrapper 26206
2025-02-23 09:04:03 (31082): Detected: BOINC client v8.1.0
2025-02-23 09:04:03 (31082): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-02-23 09:04:03 (31082): Successfully copied 'init_data.xml' to the shared directory.
2025-02-23 09:04:03 (31082): Create VM. (boinc_2f8ee62fa7e74d7e, slot#6)
2025-02-23 09:04:03 (31082): Setting Memory Size for VM. (4200MB)
2025-02-23 09:04:03 (31082): Setting CPU Count for VM. (2)
2025-02-23 09:04:03 (31082): Setting Chipset Options for VM.
2025-02-23 09:04:03 (31082): Setting Graphics Controller Options for VM.
2025-02-23 09:04:03 (31082): Setting Boot Options for VM.
2025-02-23 09:04:04 (31082): Setting Network Configuration for NAT.
2025-02-23 09:04:04 (31082): Enabling VM Network Access.
2025-02-23 09:04:04 (31082): Disabling USB Support for VM.
2025-02-23 09:04:04 (31082): Disabling COM Port Support for VM.
2025-02-23 09:04:04 (31082): Disabling LPT Port Support for VM.
2025-02-23 09:04:04 (31082): Disabling Audio Support for VM.
2025-02-23 09:04:04 (31082): Disabling Clipboard Support for VM.
2025-02-23 09:04:04 (31082): Disabling Drag and Drop Support for VM.
2025-02-23 09:04:04 (31082): Adding storage controller(s) to VM.
2025-02-23 09:04:04 (31082): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-23 09:04:06 (31082): Adding VirtualBox Guest Additions to VM.
2025-02-23 09:04:07 (31082): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-23 09:04:07 (31082): forwarding host port 54019 to guest port 80
2025-02-23 09:04:07 (31082): Enabling remote desktop for VM.
2025-02-23 09:04:07 (31082): Required extension pack not installed, remote desktop not enabled.
2025-02-23 09:04:07 (31082): Enabling shared directory for VM.
2025-02-23 09:04:07 (31082): Starting VM using VBoxManage interface. (boinc_2f8ee62fa7e74d7e, slot#6)
2025-02-23 09:04:08 (31082): Successfully started VM. (PID = '31612')
2025-02-23 09:04:08 (31082): Reporting VM Process ID to BOINC.
2025-02-23 09:04:08 (31082): Guest Log: BIOS: VirtualBox 7.1.4
2025-02-23 09:04:08 (31082): Guest Log: CPUID EDX: 0x178bfbff
2025-02-23 09:04:08 (31082): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-23 09:04:08 (31082): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-23 09:04:08 (31082): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-23 09:04:08 (31082): Detected: Web Application Enabled (http://localhost:54019)
2025-02-23 09:04:08 (31082): Preference change detected
2025-02-23 09:04:08 (31082): Setting CPU throttle for VM. (100%)
2025-02-23 09:04:08 (31082): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-23 09:04:10 (31082): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-23 09:04:10 (31082): Guest Log: BIOS: Booting from Hard Disk...
2025-02-23 09:04:13 (31082): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-23 09:04:13 (31082): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-23 09:04:13 (31082): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-23 09:04:23 (31082): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-23 09:04:23 (31082): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-23 09:04:51 (31082): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-23 09:04:51 (31082): Guest Log: 00:00:00.000226 main     Log opened 2025-02-23T14:04:49.024976000Z
2025-02-23 09:04:51 (31082): Guest Log: 00:00:00.000396 main     OS Product: Linux
2025-02-23 09:04:51 (31082): Guest Log: 00:00:00.000422 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-23 09:04:51 (31082): Guest Log: 00:00:00.000437 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-23 09:04:51 (31082): Guest Log: 00:00:00.000451 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-23 09:04:51 (31082): Guest Log: 00:00:00.000452 main     Process ID: 1266
2025-02-23 09:04:51 (31082): Guest Log: 00:00:00.000452 main     Package type: LINUX_64BITS_GENERIC
2025-02-23 09:04:51 (31082): Guest Log: 00:00:00.001820 main     5.2.32 r132073 started. Verbose level = 0
2025-02-23 09:04:51 (31082): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-23 09:04:51 (31082): Guest Log: [INFO] Mounting shared directory
2025-02-23 09:04:51 (31082): Guest Log: [INFO] Checking for init_data.xml
2025-02-23 09:05:13 (31082): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-23 09:05:13 (31082): Guest Log: [INFO] Detected branch: prod
2025-02-23 09:05:14 (31082): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-23 09:05:14 (31082): Guest Log: Copying input files
2025-02-23 09:05:15 (31082): Guest Log: Copied input files into RunAtlas.
2025-02-23 09:05:15 (31082): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-23 09:05:15 (31082): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-23 09:05:15 (31082): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-23 09:05:15 (31082): Guest Log: Further information can be found at the LHC@home message board.
2025-02-23 09:05:33 (31082): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-23 09:05:33 (31082): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-23 09:05:33 (31082): Guest Log: 2.6.3.0 1563 0 30124 142977 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-23 09:05:39 (31082): Guest Log: copied the webapp to /var/www
2025-02-23 09:05:39 (31082): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-23 09:05:39 (31082): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-23 09:05:40 (31082): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-23 09:05:40 (31082): Guest Log:  *** Starting ATLAS job. (PandaID=6523477323 taskID=43078919) ***
2025-02-23 10:43:09 (31082): Status Report: Elapsed Time: '6000.000000'
2025-02-23 10:43:09 (31082): Status Report: CPU Time: '9925.120000'
2025-02-23 12:22:11 (31082): Status Report: Elapsed Time: '12000.000000'
2025-02-23 12:22:11 (31082): Status Report: CPU Time: '21804.920000'
2025-02-23 14:01:12 (31082): Status Report: Elapsed Time: '18000.000000'
2025-02-23 14:01:12 (31082): Status Report: CPU Time: '33684.630000'
2025-02-23 15:40:13 (31082): Status Report: Elapsed Time: '24000.000000'
2025-02-23 15:40:13 (31082): Status Report: CPU Time: '45563.050000'
2025-02-23 16:44:31 (31082): Guest Log:  *** Job finished ***
2025-02-23 16:44:31 (31082): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-23 16:44:31 (31082): Guest Log: 2025-02-23 21:44:19,938 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-02-23 16:44:31 (31082): Guest Log: 2025-02-23 21:44:19,975 | INFO     | [data] copytool_out thread has finished
2025-02-23 16:44:31 (31082): Guest Log: 2025-02-23 21:44:23,941 | INFO     | [data] queue_monitor thread has finished
2025-02-23 16:44:31 (31082): Guest Log: 2025-02-23 21:44:24,839 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140514257835840)>', '<ExcThread(monitor, started 140513562826496)>']
2025-02-23 16:44:31 (31082): Guest Log: 2025-02-23 21:44:25,071 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-23 16:44:31 (31082): Guest Log: 2025-02-23 21:44:25,071 | INFO     | [monitor] control thread has ended
2025-02-23 16:44:31 (31082): Guest Log: 2025-02-23 21:44:29,846 | INFO     | all workflow threads have been joined
2025-02-23 16:44:31 (31082): Guest Log: 2025-02-23 21:44:29,846 | INFO     | end of generic workflow (traces error code: 0)
2025-02-23 16:44:31 (31082): Guest Log: 2025-02-23 21:44:29,846 | INFO     | traces error code: 0
2025-02-23 16:44:31 (31082): Guest Log: 2025-02-23 21:44:29,846 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-23 16:44:31 (31082): Guest Log: 2025-02-23 21:44:30,032 [wrapper] ==== pilot stdout END ====
2025-02-23 16:44:31 (31082): Guest Log: 2025-02-23 21:44:30,037 [wrapper] ==== wrapper stdout RESUME ====
2025-02-23 16:44:31 (31082): Guest Log: 2025-02-23 21:44:30,042 [wrapper] pilotpid: 5865
2025-02-23 16:44:31 (31082): Guest Log: 2025-02-23 21:44:30,048 [wrapper] Pilot exit status: 0
2025-02-23 16:44:31 (31082): Guest Log: 2025-02-23 21:44:30,148 [wrapper] pandaids: 6523477323
2025-02-23 16:44:31 (31082): Guest Log: 2025-02-23 21:44:30,178 [wrapper] cleanup supervisor_pilot  4802 5866
2025-02-23 16:44:31 (31082): Guest Log: 2025-02-23 21:44:30,184 [wrapper] Test setup, not cleaning
2025-02-23 16:44:31 (31082): Guest Log: 2025-02-23 21:44:30,197 [wrapper] apfmon messages muted
2025-02-23 16:44:31 (31082): Guest Log: 2025-02-23 21:44:30,203 [wrapper] ==== wrapper stdout END ====
2025-02-23 16:44:31 (31082): Guest Log: 2025-02-23 21:44:30,209 [wrapper] ==== wrapper stderr END ====
2025-02-23 16:44:31 (31082): Guest Log:  *** Error codes and diagnostics ***
2025-02-23 16:44:31 (31082): Guest Log:     "exeErrorCode": 0,
2025-02-23 16:44:31 (31082): Guest Log:     "exeErrorDiag": "",
2025-02-23 16:44:31 (31082): Guest Log:     "pilotErrorCode": 0,
2025-02-23 16:44:31 (31082): Guest Log:     "pilotErrorDiag": "",
2025-02-23 16:44:31 (31082): Guest Log:  *** Listing of results directory ***
2025-02-23 16:44:31 (31082): Guest Log: total 331752
2025-02-23 16:44:31 (31082): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 22 23:51 pilot3.tar.gz
2025-02-23 16:44:31 (31082): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 23 00:18 queuedata.json
2025-02-23 16:44:31 (31082): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 23 00:18 runpilot2-wrapper.sh
2025-02-23 16:44:31 (31082): Guest Log: -rw-r--r--. 1 atlas atlas      9280 Feb 23 14:05 init_data.xml
2025-02-23 16:44:31 (31082): Guest Log: -rw-r--r--. 1 atlas atlas    503556 Feb 23 14:05 input.tar.gz
2025-02-23 16:44:31 (31082): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Feb 23 14:05 start_atlas.sh
2025-02-23 16:44:31 (31082): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 23 14:05 EVNT.43078917._002592.pool.root.1 -> /data/./ATLAS.root_0
2025-02-23 16:44:31 (31082): Guest Log: -rw-r--r--. 1 atlas atlas      2546 Feb 23 14:05 pandaJob.out
2025-02-23 16:44:31 (31082): Guest Log: -rw-------. 1 atlas atlas       424 Feb 23 14:05 setup.sh.local
2025-02-23 16:44:31 (31082): Guest Log: -rw-------. 1 atlas atlas    987736 Feb 23 14:07 agis_schedconf.cvmfs.json
2025-02-23 16:44:31 (31082): Guest Log: drwx------. 4 atlas atlas      4096 Feb 23 14:07 pilot3
2025-02-23 16:44:31 (31082): Guest Log: -rw-------. 1 atlas atlas 329932577 Feb 23 21:42 HITS.43078919._089884.pool.root.1
2025-02-23 16:44:31 (31082): Guest Log: -rw-------. 1 atlas atlas      1037 Feb 23 21:43 memory_monitor_summary.json
2025-02-23 16:44:31 (31082): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 23 21:43 agis_ddmendpoints.agis.ALL.json
2025-02-23 16:44:31 (31082): Guest Log: -rw-------. 1 atlas atlas    424933 Feb 23 21:43 log.43078919._089884.job.log.tgz.1
2025-02-23 16:44:31 (31082): Guest Log: -rw-------. 1 atlas atlas        95 Feb 23 21:44 pilot_heartbeat.json
2025-02-23 16:44:31 (31082): Guest Log: -rw-------. 1 atlas atlas      7730 Feb 23 21:44 heartbeat.json
2025-02-23 16:44:31 (31082): Guest Log: -rw-------. 1 atlas atlas      4584 Feb 23 21:44 pilotlog.txt
2025-02-23 16:44:31 (31082): Guest Log: -rw-------. 1 atlas atlas   2595626 Feb 23 21:44 log.43078919._089884.job.log.1
2025-02-23 16:44:31 (31082): Guest Log: -rw-------. 1 atlas atlas       357 Feb 23 21:44 output.list
2025-02-23 16:44:31 (31082): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 23 21:44 runtime_log
2025-02-23 16:44:31 (31082): Guest Log: -rw-------. 1 atlas atlas   3041280 Feb 23 21:44 result.tar.gz
2025-02-23 16:44:31 (31082): Guest Log: -rw-------. 1 atlas atlas       664 Feb 23 21:44 Ye1LDmysE66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmOmuKDmgWHd5n.diag
2025-02-23 16:44:31 (31082): Guest Log: -rw-r--r--. 1 atlas atlas     10944 Feb 23 21:44 runtime_log.err
2025-02-23 16:44:31 (31082): Guest Log: Looking for outputfile HITS.43078919._089884.pool.root.1
2025-02-23 16:44:31 (31082): Guest Log: HITS file was successfully produced
2025-02-23 16:44:31 (31082): Guest Log: -rw-------. 1 atlas atlas 329932577 Feb 23 21:42 /home/atlas/RunAtlas/HITS.43078919._089884.pool.root.1
2025-02-23 16:44:31 (31082): Guest Log: Successfully finished the ATLAS job!
2025-02-23 16:44:31 (31082): Guest Log: Copying the results back to the shared directory!
2025-02-23 16:44:31 (31082): Guest Log:  *** Contents of shared directory: ***
2025-02-23 16:44:31 (31082): Guest Log: total 339656
2025-02-23 16:44:31 (31082): Guest Log: -rw-r--r--. 1 root root 344221945 Feb 23 14:04 ATLAS.root_0
2025-02-23 16:44:31 (31082): Guest Log: -rw-r--r--. 1 root root      9280 Feb 23 14:04 init_data.xml
2025-02-23 16:44:31 (31082): Guest Log: -rw-r--r--. 1 root root    503556 Feb 23 14:04 input.tar.gz
2025-02-23 16:44:31 (31082): Guest Log: -rw-r--r--. 1 root root   3041280 Feb 23 21:44 result.tar.gz
2025-02-23 16:44:31 (31082): Guest Log: -rw-r--r--. 1 root root     17569 Feb 23 14:04 start_atlas.sh
2025-02-23 16:44:31 (31082): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-23 16:44:31 (31082): VM Completion File Detected.
2025-02-23 16:44:31 (31082): Powering off VM.
2025-02-23 16:44:31 (31082): Successfully stopped VM.
2025-02-23 16:44:31 (31082): Deregistering VM. (boinc_2f8ee62fa7e74d7e, slot#6)
2025-02-23 16:44:31 (31082): Removing network bandwidth throttle group from VM.
2025-02-23 16:44:32 (31082): Removing VM from VirtualBox.
16:44:37 (31082): called boinc_finish(0)

</stderr_txt>
]]>

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