Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:56:22 (2609418): wrapper (7.7.26015): starting
14:56:22 (2609418): wrapper: running run_atlas (--nthreads 4)
[2025-02-26 14:56:22] Arguments: --nthreads 4
[2025-02-26 14:56:22] Threads: 4
[2025-02-26 14:56:22] Checking for CVMFS
[2025-02-26 14:56:22] No cvmfs_config command found, will try listing directly
[2025-02-26 14:56:22] CVMFS is ok
[2025-02-26 14:56:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-26 14:56:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-26 14:56:22] Further information can be found at the LHC@home message board.
[2025-02-26 14:56:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 14:56:22] Checking for apptainer binary...
[2025-02-26 14:56:22] which: no apptainer in ((null))
[2025-02-26 14:56:22] apptainer is not installed, using version from CVMFS
[2025-02-26 14:56:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 14:56:23] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-02-26 14:56:23] apptainer works
[2025-02-26 14:56:23] Set ATHENA_PROC_NUMBER=4
[2025-02-26 14:56:23] Set ATHENA_CORE_NUMBER=4
[2025-02-26 14:56:23] Starting ATLAS job with PandaID=6523955555
[2025-02-26 14:56:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 21:09:11]  *** The last 200 lines of the pilot log: ***
[2025-02-26 21:09:11] 2025-02-26 20:08:50,310 | INFO     | fitting pss+swap vs Time
[2025-02-26 21:09:11] 2025-02-26 20:08:50,311 | INFO     | model: linear, x: [1740578229.0, 1740578290.0, 1740578351.0, 1740578412.0, 1740578473.0, 1740578534.0, 1740578595.0, 1740578656.0, 1740578717.0, 1740578778.0, 1740
[2025-02-26 21:09:11] 2025-02-26 20:08:50,311 | INFO     | sum of square deviations: 15202619927.5
[2025-02-26 21:09:11] 2025-02-26 20:08:50,314 | INFO     | sum of deviations: 183165446945.0
[2025-02-26 21:09:11] 2025-02-26 20:08:50,315 | INFO     | mean x: 1740589361.5
[2025-02-26 21:09:11] 2025-02-26 20:08:50,315 | INFO     | mean y: 2319150.8469945355
[2025-02-26 21:09:11] 2025-02-26 20:08:50,315 | INFO     | -- intersect: -20968791741.043034
[2025-02-26 21:09:11] 2025-02-26 20:08:50,315 | INFO     | intersect: -20968791741.043034
[2025-02-26 21:09:11] 2025-02-26 20:08:50,315 | INFO     | chi2: 4.802694435957449
[2025-02-26 21:09:11] 2025-02-26 20:08:50,316 | INFO     | model: linear, x: [1740578229.0, 1740578290.0, 1740578351.0, 1740578412.0, 1740578473.0, 1740578534.0, 1740578595.0, 1740578656.0, 1740578717.0, 1740578778.0, 1740
[2025-02-26 21:09:11] 2025-02-26 20:08:50,316 | INFO     | sum of square deviations: 14588031660.0
[2025-02-26 21:09:11] 2025-02-26 20:08:50,320 | INFO     | sum of deviations: 203252602009.0
[2025-02-26 21:09:11] 2025-02-26 20:08:50,320 | INFO     | mean x: 1740589209.0
[2025-02-26 21:09:11] 2025-02-26 20:08:50,320 | INFO     | mean y: 2324070.731301939
[2025-02-26 21:09:11] 2025-02-26 20:08:50,320 | INFO     | -- intersect: -24249013875.572357
[2025-02-26 21:09:11] 2025-02-26 20:08:50,320 | INFO     | intersect: -24249013875.572357
[2025-02-26 21:09:11] 2025-02-26 20:08:50,321 | INFO     | chi2: 4.01985314509014
[2025-02-26 21:09:11] 2025-02-26 20:08:50,321 | INFO     | current chi2=4.01985314509014 (change=16.300043679777513 %)
[2025-02-26 21:09:11] 2025-02-26 20:08:50,321 | INFO     | right removable region: 360
[2025-02-26 21:09:11] 2025-02-26 20:08:50,321 | INFO     | model: linear, x: [1740578534.0, 1740578595.0, 1740578656.0, 1740578717.0, 1740578778.0, 1740578839.0, 1740578900.0, 1740578961.0, 1740579022.0, 1740579083.0, 1740
[2025-02-26 21:09:11] 2025-02-26 20:08:50,321 | INFO     | sum of square deviations: 14588031660.0
[2025-02-26 21:09:11] 2025-02-26 20:08:50,325 | INFO     | sum of deviations: 96363152471.0
[2025-02-26 21:09:11] 2025-02-26 20:08:50,325 | INFO     | mean x: 1740589514.0
[2025-02-26 21:09:11] 2025-02-26 20:08:50,325 | INFO     | mean y: 2340653.645429363
[2025-02-26 21:09:11] 2025-02-26 20:08:50,325 | INFO     | -- intersect: -11495351196.510986
[2025-02-26 21:09:11] 2025-02-26 20:08:50,325 | INFO     | intersect: -11495351196.510986
[2025-02-26 21:09:11] 2025-02-26 20:08:50,326 | INFO     | chi2: 2.349742444208385
[2025-02-26 21:09:11] 2025-02-26 20:08:50,326 | INFO     | current chi2=2.349742444208385 (change=51.07449629491265 %)
[2025-02-26 21:09:11] 2025-02-26 20:08:50,326 | INFO     | model: linear, x: [1740578839.0, 1740578900.0, 1740578961.0, 1740579022.0, 1740579083.0, 1740579144.0, 1740579205.0, 1740579266.0, 1740579327.0, 1740579388.0, 1740
[2025-02-26 21:09:11] 2025-02-26 20:08:50,329 | INFO     | sum of square deviations: 13990234405.0
[2025-02-26 21:09:11] 2025-02-26 20:08:50,332 | INFO     | sum of deviations: 26756269997.000004
[2025-02-26 21:09:11] 2025-02-26 20:08:50,332 | INFO     | mean x: 1740589666.5
[2025-02-26 21:09:11] 2025-02-26 20:08:50,332 | INFO     | mean y: 2358410.938202247
[2025-02-26 21:09:11] 2025-02-26 20:08:50,332 | INFO     | -- intersect: -3326512694.625107
[2025-02-26 21:09:11] 2025-02-26 20:08:50,333 | INFO     | intersect: -3326512694.625107
[2025-02-26 21:09:11] 2025-02-26 20:08:50,333 | INFO     | chi2: 0.9112404073129176
[2025-02-26 21:09:11] 2025-02-26 20:08:50,333 | INFO     | current chi2=0.9112404073129176 (change=61.21956218823339 %)
[2025-02-26 21:09:11] 2025-02-26 20:08:50,333 | INFO     | model: linear, x: [1740579144.0, 1740579205.0, 1740579266.0, 1740579327.0, 1740579388.0, 1740579449.0, 1740579510.0, 1740579571.0, 1740579632.0, 1740579693.0, 1740
[2025-02-26 21:09:11] 2025-02-26 20:08:50,334 | INFO     | sum of square deviations: 13408995600.0
[2025-02-26 21:09:11] 2025-02-26 20:08:50,337 | INFO     | sum of deviations: 11157271246.000156
[2025-02-26 21:09:11] 2025-02-26 20:08:50,337 | INFO     | mean x: 1740589819.0
[2025-02-26 21:09:11] 2025-02-26 20:08:50,337 | INFO     | mean y: 2362485.9458689457
[2025-02-26 21:09:11] 2025-02-26 20:08:50,337 | INFO     | -- intersect: -1445936351.48602
[2025-02-26 21:09:11] 2025-02-26 20:08:50,337 | INFO     | intersect: -1445936351.48602
[2025-02-26 21:09:11] 2025-02-26 20:08:50,338 | INFO     | chi2: 0.819273627321356
[2025-02-26 21:09:11] 2025-02-26 20:08:50,338 | INFO     | current chi2=0.819273627321356 (change=10.092482648212988 %)
[2025-02-26 21:09:11] 2025-02-26 20:08:50,338 | INFO     | left removable region: 30
[2025-02-26 21:09:11] 2025-02-26 20:08:50,338 | INFO     | model: linear, x: [1740580059.0, 1740580120.0, 1740580181.0, 1740580242.0, 1740580303.0, 1740580364.0, 1740580425.0, 1740580486.0, 1740580547.0, 1740580608.0, 1740
[2025-02-26 21:09:11] 2025-02-26 20:08:50,339 | INFO     | sum of square deviations: 11143362422.5
[2025-02-26 21:09:11] 2025-02-26 20:08:50,342 | INFO     | sum of deviations: 21370502283.000004
[2025-02-26 21:09:11] 2025-02-26 20:08:50,342 | INFO     | mean x: 1740590093.5
[2025-02-26 21:09:11] 2025-02-26 20:08:50,342 | INFO     | mean y: 2371358.703030303
[2025-02-26 21:09:11] 2025-02-26 20:08:50,342 | INFO     | -- intersect: -3335695120.387917
[2025-02-26 21:09:11] 2025-02-26 20:08:50,342 | INFO     | intersect: -3335695120.387917
[2025-02-26 21:09:11] 2025-02-26 20:08:50,342 | INFO     | chi2: 0.0024044663336216564
[2025-02-26 21:09:11] 2025-02-26 20:08:50,343 | INFO     | -- intersect: -3335695120.387917
[2025-02-26 21:09:11] 2025-02-26 20:08:50,343 | INFO     | current memory leak: 1.92 B/s (using 330 data points, chi2=0.00)
[2025-02-26 21:09:11] 2025-02-26 20:08:50,343 | INFO     | ..............................
[2025-02-26 21:09:11] 2025-02-26 20:08:50,343 | INFO     | . Timing measurements:
[2025-02-26 21:09:11] 2025-02-26 20:08:50,343 | INFO     | . get job = 0 s
[2025-02-26 21:09:11] 2025-02-26 20:08:50,344 | INFO     | . initial setup = 1 s
[2025-02-26 21:09:11] 2025-02-26 20:08:50,344 | INFO     | . payload setup = 8 s
[2025-02-26 21:09:11] 2025-02-26 20:08:50,344 | INFO     | . stage-in = 0 s
[2025-02-26 21:09:11] 2025-02-26 20:08:50,344 | INFO     | . payload execution = 22293 s
[2025-02-26 21:09:11] 2025-02-26 20:08:50,344 | INFO     | . stage-out = 1 s
[2025-02-26 21:09:11] 2025-02-26 20:08:50,344 | INFO     | . log creation = 0 s
[2025-02-26 21:09:11] 2025-02-26 20:08:50,344 | INFO     | ..............................
[2025-02-26 21:09:11] 2025-02-26 20:08:50,443 | INFO     | 
[2025-02-26 21:09:11] 2025-02-26 20:08:50,443 | INFO     | job summary report
[2025-02-26 21:09:11] 2025-02-26 20:08:50,443 | INFO     | --------------------------------------------------
[2025-02-26 21:09:11] 2025-02-26 20:08:50,443 | INFO     | PanDA job id: 6523955555
[2025-02-26 21:09:11] 2025-02-26 20:08:50,444 | INFO     | task id: 43078919
[2025-02-26 21:09:11] 2025-02-26 20:08:50,444 | INFO     | errors: (none)
[2025-02-26 21:09:11] 2025-02-26 20:08:50,444 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 21:09:11] 2025-02-26 20:08:50,444 | INFO     | pilot state: finished 
[2025-02-26 21:09:11] 2025-02-26 20:08:50,444 | INFO     | transexitcode: 0
[2025-02-26 21:09:11] 2025-02-26 20:08:50,444 | INFO     | exeerrorcode: 0
[2025-02-26 21:09:11] 2025-02-26 20:08:50,444 | INFO     | exeerrordiag: 
[2025-02-26 21:09:11] 2025-02-26 20:08:50,444 | INFO     | exitcode: 0
[2025-02-26 21:09:11] 2025-02-26 20:08:50,444 | INFO     | exitmsg: OK
[2025-02-26 21:09:11] 2025-02-26 20:08:50,444 | INFO     | cpuconsumptiontime: 84187 s
[2025-02-26 21:09:11] 2025-02-26 20:08:50,444 | INFO     | nevents: 400
[2025-02-26 21:09:11] 2025-02-26 20:08:50,444 | INFO     | neventsw: 0
[2025-02-26 21:09:11] 2025-02-26 20:08:50,445 | INFO     | pid: 2620840
[2025-02-26 21:09:11] 2025-02-26 20:08:50,445 | INFO     | pgrp: 2620840
[2025-02-26 21:09:11] 2025-02-26 20:08:50,445 | INFO     | corecount: 4
[2025-02-26 21:09:11] 2025-02-26 20:08:50,445 | INFO     | event service: False
[2025-02-26 21:09:11] 2025-02-26 20:08:50,445 | INFO     | sizes: {0: 2363781, 7: 2363987, 11: 2364015, 22305: 2397575, 22307: 2406538, 22310: 2406594, 22317: 2406892}
[2025-02-26 21:09:11] 2025-02-26 20:08:50,445 | INFO     | --------------------------------------------------
[2025-02-26 21:09:11] 2025-02-26 20:08:50,445 | INFO     | 
[2025-02-26 21:09:11] 2025-02-26 20:08:50,445 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-02-26 21:09:11] 2025-02-26 20:08:50,475 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 21:09:11] 2025-02-26 20:08:50,476 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 21:09:11] 2025-02-26 20:08:50,476 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 21:09:11] 2025-02-26 20:08:50,476 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 21:09:11] 2025-02-26 20:08:50,476 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 21:09:11] 2025-02-26 20:08:50,476 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 21:09:11] 2025-02-26 20:08:50,476 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 21:09:11] 2025-02-26 20:08:50,476 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 21:09:11] 2025-02-26 20:08:50,477 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 21:09:11] 2025-02-26 20:08:50,477 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 21:09:11] 2025-02-26 20:08:50,477 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 21:09:11] 2025-02-26 20:08:50,477 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 21:09:11] 2025-02-26 20:08:50,477 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 21:09:11] 2025-02-26 20:08:50,477 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 21:09:11] 2025-02-26 20:08:50,477 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 21:09:11] 2025-02-26 20:08:50,477 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 21:09:11] 2025-02-26 20:08:50,477 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 21:09:11] 2025-02-26 20:08:50,477 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 21:09:11] 2025-02-26 20:08:50,478 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 21:09:11] 2025-02-26 20:08:50,478 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 21:09:11] 2025-02-26 20:08:50,478 | INFO     | job 6523955555 has completed (purged errors)
[2025-02-26 21:09:11] 2025-02-26 20:08:50,478 | INFO     | overall cleanup function is called
[2025-02-26 21:09:11] 2025-02-26 20:08:51,488 | INFO     | --- collectZombieJob: --- 10, [2620840]
[2025-02-26 21:09:11] 2025-02-26 20:08:51,488 | INFO     | zombie collector waiting for pid 2620840
[2025-02-26 21:09:11] 2025-02-26 20:08:51,489 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 21:09:11] 2025-02-26 20:08:51,489 | INFO     | collected zombie processes
[2025-02-26 21:09:11] 2025-02-26 20:08:51,489 | INFO     | will attempt to kill all subprocesses of pid=2620840
[2025-02-26 21:09:11] 2025-02-26 20:08:51,798 | INFO     | process IDs to be killed: [2620840] (in reverse order)
[2025-02-26 21:09:11] 2025-02-26 20:08:52,048 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 21:09:11] 2025-02-26 20:08:52,049 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 21:09:11] 2025-02-26 20:08:52,071 | INFO     | did not find any defunct processes belonging to 2620840
[2025-02-26 21:09:11] 2025-02-26 20:08:52,089 | INFO     | did not find any defunct processes belonging to 2620840
[2025-02-26 21:09:11] 2025-02-26 20:08:52,090 | INFO     | ready for new job
[2025-02-26 21:09:11] 2025-02-26 20:08:52,090 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 21:09:11] 2025-02-26 20:08:52,093 | INFO     | **************************************
[2025-02-26 21:09:11] 2025-02-26 20:08:52,093 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 21:09:11] 2025-02-26 20:08:52,093 | INFO     | **************************************
[2025-02-26 21:09:11] 2025-02-26 20:08:52,093 | INFO     | 
[2025-02-26 21:09:11] 2025-02-26 20:08:52,102 | INFO     | architecture information:
[2025-02-26 21:09:11] 2025-02-26 20:08:52,102 | INFO     | executing command: cat /etc/os-release
[2025-02-26 21:09:11] 2025-02-26 20:08:52,129 | INFO     | cat /etc/os-release:
[2025-02-26 21:09:11] NAME="CentOS Linux"
[2025-02-26 21:09:11] VERSION="7 (Core)"
[2025-02-26 21:09:11] ID="centos"
[2025-02-26 21:09:11] ID_LIKE="rhel fedora"
[2025-02-26 21:09:11] VERSION_ID="7"
[2025-02-26 21:09:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 21:09:11] ANSI_COLOR="0;31"
[2025-02-26 21:09:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 21:09:11] HOME_URL="https://www.centos.org/"
[2025-02-26 21:09:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 21:09:11] 
[2025-02-26 21:09:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 21:09:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 21:09:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 21:09:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 21:09:11] 
[2025-02-26 21:09:11] 2025-02-26 20:08:52,129 | INFO     | **************************************
[2025-02-26 21:09:11] 2025-02-26 20:08:52,632 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-02-26 21:09:11] 2025-02-26 20:08:52,655 | INFO     | sufficient remaining disk space (3335723679744 B)
[2025-02-26 21:09:11] 2025-02-26 20:08:52,656 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 21:09:11] 2025-02-26 20:08:52,656 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 21:09:11] 2025-02-26 20:08:52,741 | INFO     | all payload control threads have been joined
[2025-02-26 21:09:11] 2025-02-26 20:08:52,904 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 21:09:11] 2025-02-26 20:08:52,904 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 21:09:11] 2025-02-26 20:08:52,904 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 21:09:11] 2025-02-26 20:08:53,108 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-26 21:09:11] 2025-02-26 20:08:53,109 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-26 21:09:11] 2025-02-26 20:08:53,109 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 21:09:11] 2025-02-26 20:08:53,109 | INFO     | will abort loop
[2025-02-26 21:09:11] 2025-02-26 20:08:53,177 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 21:09:11] 2025-02-26 20:08:53,412 | INFO     | all data control threads have been joined
[2025-02-26 21:09:11] 2025-02-26 20:08:53,539 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 21:09:11] 2025-02-26 20:08:53,614 | INFO     | all job control threads have been joined
[2025-02-26 21:09:11] 2025-02-26 20:08:53,660 | INFO     | [job] retrieve thread has finished
[2025-02-26 21:09:11] 2025-02-26 20:08:53,695 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 21:09:11] 2025-02-26 20:08:53,744 | INFO     | [payload] control thread has finished
[2025-02-26 21:09:11] 2025-02-26 20:08:54,114 | INFO     | [job] job monitor thread has finished
[2025-02-26 21:09:11] 2025-02-26 20:08:54,118 | INFO     | [data] copytool_in thread has finished
[2025-02-26 21:09:11] 2025-02-26 20:08:54,171 | INFO     | [payload] validate_post thread has finished
[2025-02-26 21:09:11] 2025-02-26 20:08:54,312 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 21:09:11] 2025-02-26 20:08:54,418 | INFO     | [data] control thread has finished
[2025-02-26 21:09:11] 2025-02-26 20:08:54,534 | INFO     | [job] validate thread has finished
[2025-02-26 21:09:11] 2025-02-26 20:08:54,620 | INFO     | [job] control thread has finished
[2025-02-26 21:09:11] 2025-02-26 20:08:54,675 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 21:09:11] 2025-02-26 20:08:54,969 | INFO     | [payload] failed_post thread has finished
[2025-02-26 21:09:11] 2025-02-26 20:08:55,182 | INFO     | [data] copytool_out thread has finished
[2025-02-26 21:09:11] 2025-02-26 20:08:55,454 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 21:09:11] 2025-02-26 20:08:56,458 | INFO     | [job] queue monitor thread has finished
[2025-02-26 21:09:11] 2025-02-26 20:08:57,545 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 21:09:11] 2025-02-26 20:09:02,916 | INFO     | job.realtimelogging is not enabled
[2025-02-26 21:09:11] 2025-02-26 20:09:03,921 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 21:09:11] 2025-02-26 20:09:05,491 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22649871341376)>', '<ExcThread(monitor, started 22649566635776)>']
[2025-02-26 21:09:11] 2025-02-26 20:09:05,963 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 21:09:11] 2025-02-26 20:09:05,964 | INFO     | [monitor] control thread has ended
[2025-02-26 21:09:11] 2025-02-26 20:09:10,517 | INFO     | all workflow threads have been joined
[2025-02-26 21:09:11] 2025-02-26 20:09:10,517 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 21:09:11] 2025-02-26 20:09:10,518 | INFO     | traces error code: 0
[2025-02-26 21:09:11] 2025-02-26 20:09:10,518 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 21:09:11] 2025-02-26 20:09:10,706 [wrapper] ==== pilot stdout END ====
[2025-02-26 21:09:11] 2025-02-26 20:09:10,710 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 21:09:11] 2025-02-26 20:09:10,714 [wrapper] pilotpid: 2613386
[2025-02-26 21:09:11] 2025-02-26 20:09:10,718 [wrapper] Pilot exit status: 0
[2025-02-26 21:09:11] 2025-02-26 20:09:10,733 [wrapper] pandaids: 6523955555
[2025-02-26 21:09:11] 2025-02-26 20:09:10,872 [wrapper] cleanup supervisor_pilot  157762 2613387
[2025-02-26 21:09:11] 2025-02-26 20:09:10,877 [wrapper] Test setup, not cleaning
[2025-02-26 21:09:11] 2025-02-26 20:09:10,885 [wrapper] apfmon messages muted
[2025-02-26 21:09:11] 2025-02-26 20:09:10,894 [wrapper] ==== wrapper stdout END ====
[2025-02-26 21:09:11] 2025-02-26 20:09:10,897 [wrapper] ==== wrapper stderr END ====
[2025-02-26 21:09:11]  *** Error codes and diagnostics ***
[2025-02-26 21:09:11]     "exeErrorCode": 0,
[2025-02-26 21:09:11]     "exeErrorDiag": "",
[2025-02-26 21:09:11]     "pilotErrorCode": 0,
[2025-02-26 21:09:11]     "pilotErrorDiag": "",
[2025-02-26 21:09:11]  *** Listing of results directory ***
[2025-02-26 21:09:11] total 661736
[2025-02-26 21:09:11] -rw-r--r-- 1 boinc boinc    491065 Feb 23 07:58 pilot3.tar.gz
[2025-02-26 21:09:11] -rw-r--r-- 1 boinc boinc      5118 Feb 23 08:13 queuedata.json
[2025-02-26 21:09:11] -rwx------ 1 boinc boinc     35865 Feb 23 08:15 runpilot2-wrapper.sh
[2025-02-26 21:09:11] -rw-r--r-- 1 boinc boinc       100 Feb 26 14:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 21:09:11] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 14:56 run_atlas
[2025-02-26 21:09:11] -rw-r--r-- 1 boinc boinc       105 Feb 26 14:56 job.xml
[2025-02-26 21:09:11] -rw-r--r-- 2 boinc boinc 344499172 Feb 26 14:56 EVNT.43078917._002179.pool.root.1
[2025-02-26 21:09:11] -rw-r--r-- 1 boinc boinc      6677 Feb 26 14:56 init_data.xml
[2025-02-26 21:09:11] -rw-r--r-- 2 boinc boinc     17569 Feb 26 14:56 start_atlas.sh
[2025-02-26 21:09:11] drwxrwx--x 2 boinc boinc      4096 Feb 26 14:56 shared
[2025-02-26 21:09:11] -rw-r--r-- 2 boinc boinc    503556 Feb 26 14:56 input.tar.gz
[2025-02-26 21:09:11] -rw-r--r-- 1 boinc boinc         0 Feb 26 14:56 boinc_lockfile
[2025-02-26 21:09:11] -rw-r--r-- 1 boinc boinc      2546 Feb 26 14:56 pandaJob.out
[2025-02-26 21:09:11] -rw------- 1 boinc boinc       424 Feb 26 14:56 setup.sh.local
[2025-02-26 21:09:11] -rw------- 1 boinc boinc    990212 Feb 26 14:56 agis_schedconf.cvmfs.json
[2025-02-26 21:09:11] drwx------ 4 boinc boinc      4096 Feb 26 14:56 pilot3
[2025-02-26 21:09:11] -rw------- 1 boinc boinc 323193204 Feb 26 21:07 HITS.43078919._090704.pool.root.1
[2025-02-26 21:09:11] -rw-r--r-- 1 boinc boinc       532 Feb 26 21:08 boinc_task_state.xml
[2025-02-26 21:09:11] -rw------- 1 boinc boinc      1024 Feb 26 21:08 memory_monitor_summary.json
[2025-02-26 21:09:11] -rw------- 1 boinc boinc   1569202 Feb 26 21:08 agis_ddmendpoints.agis.ALL.json
[2025-02-26 21:09:11] -rw------- 1 boinc boinc    465465 Feb 26 21:08 log.43078919._090704.job.log.tgz.1
[2025-02-26 21:09:11] -rw------- 1 boinc boinc      7700 Feb 26 21:08 heartbeat.json
[2025-02-26 21:09:11] -rw------- 1 boinc boinc        95 Feb 26 21:08 pilot_heartbeat.json
[2025-02-26 21:09:11] -rw-r--r-- 1 boinc boinc      8192 Feb 26 21:09 boinc_mmap_file
[2025-02-26 21:09:11] -rw------- 1 boinc boinc      4484 Feb 26 21:09 pilotlog.txt
[2025-02-26 21:09:11] -rw------- 1 boinc boinc   2600616 Feb 26 21:09 log.43078919._090704.job.log.1
[2025-02-26 21:09:11] -rw------- 1 boinc boinc       357 Feb 26 21:09 output.list
[2025-02-26 21:09:11] -rw-r--r-- 1 boinc boinc        28 Feb 26 21:09 wrapper_checkpoint.txt
[2025-02-26 21:09:11] -rw-r--r-- 1 boinc boinc       620 Feb 26 21:09 runtime_log
[2025-02-26 21:09:11] -rw------- 1 boinc boinc   3082240 Feb 26 21:09 result.tar.gz
[2025-02-26 21:09:11] -rw-r--r-- 1 boinc boinc     11424 Feb 26 21:09 runtime_log.err
[2025-02-26 21:09:11] -rw------- 1 boinc boinc       666 Feb 26 21:09 h3FLDmvNL66n9Rq4apOajLDm4fhM0noT9bVoFjIUDmlmeKDmHGxuIm.diag
[2025-02-26 21:09:11] -rw-r--r-- 1 boinc boinc     21301 Feb 26 21:09 stderr.txt
[2025-02-26 21:09:11] HITS file was successfully produced:
[2025-02-26 21:09:11] -rw------- 1 boinc boinc 323193204 Feb 26 21:07 shared/HITS.pool.root.1
[2025-02-26 21:09:11]  *** Contents of shared directory: ***
[2025-02-26 21:09:11] total 655580
[2025-02-26 21:09:11] -rw-r--r-- 2 boinc boinc 344499172 Feb 26 14:56 ATLAS.root_0
[2025-02-26 21:09:11] -rw-r--r-- 2 boinc boinc     17569 Feb 26 14:56 start_atlas.sh
[2025-02-26 21:09:11] -rw-r--r-- 2 boinc boinc    503556 Feb 26 14:56 input.tar.gz
[2025-02-26 21:09:11] -rw------- 1 boinc boinc 323193204 Feb 26 21:07 HITS.pool.root.1
[2025-02-26 21:09:11] -rw------- 1 boinc boinc   3082240 Feb 26 21:09 result.tar.gz
21:09:13 (2609418): run_atlas exited; CPU time 83859.950580
21:09:13 (2609418): called boinc_finish(0)

</stderr_txt>
]]>

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