Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:55:22 (3326647): wrapper (7.7.26015): starting
14:55:22 (3326647): wrapper: running run_atlas (--nthreads 4)
[2025-02-26 14:55:22] Arguments: --nthreads 4
[2025-02-26 14:55:22] Threads: 4
[2025-02-26 14:55:22] Checking for CVMFS
[2025-02-26 14:55:22] No cvmfs_config command found, will try listing directly
[2025-02-26 14:55:22] CVMFS is ok
[2025-02-26 14:55:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-26 14:55:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-26 14:55:22] Further information can be found at the LHC@home message board.
[2025-02-26 14:55:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 14:55:22] Checking for apptainer binary...
[2025-02-26 14:55:22] which: no apptainer in ((null))
[2025-02-26 14:55:22] apptainer is not installed, using version from CVMFS
[2025-02-26 14:55:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 14:55:22] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-02-26 14:55:22] apptainer works
[2025-02-26 14:55:22] Set ATHENA_PROC_NUMBER=4
[2025-02-26 14:55:22] Set ATHENA_CORE_NUMBER=4
[2025-02-26 14:55:22] Starting ATLAS job with PandaID=6523787823
[2025-02-26 14:55:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 21:07:50]  *** The last 200 lines of the pilot log: ***
[2025-02-26 21:07:50] 2025-02-26 20:07:28,547 | INFO     | -- intersect: -19149618609.11822
[2025-02-26 21:07:50] 2025-02-26 20:07:28,547 | INFO     | intersect: -19149618609.11822
[2025-02-26 21:07:50] 2025-02-26 20:07:28,547 | INFO     | chi2: 5.040495491300036
[2025-02-26 21:07:50] 2025-02-26 20:07:28,548 | INFO     | model: linear, x: [1740578171.0, 1740578232.0, 1740578293.0, 1740578354.0, 1740578415.0, 1740578476.0, 1740578537.0, 1740578598.0, 1740578659.0, 1740578720.0, 1740
[2025-02-26 21:07:50] 2025-02-26 20:07:28,548 | INFO     | sum of square deviations: 14588031660.0
[2025-02-26 21:07:50] 2025-02-26 20:07:28,551 | INFO     | sum of deviations: 190630340245.0
[2025-02-26 21:07:50] 2025-02-26 20:07:28,551 | INFO     | mean x: 1740589151.0
[2025-02-26 21:07:50] 2025-02-26 20:07:28,552 | INFO     | mean y: 2324227.166204986
[2025-02-26 21:07:50] 2025-02-26 20:07:28,552 | INFO     | -- intersect: -22742972041.397396
[2025-02-26 21:07:50] 2025-02-26 20:07:28,552 | INFO     | intersect: -22742972041.397396
[2025-02-26 21:07:50] 2025-02-26 20:07:28,552 | INFO     | chi2: 4.064056717233432
[2025-02-26 21:07:50] 2025-02-26 20:07:28,552 | INFO     | current chi2=4.064056717233432 (change=19.371880715932612 %)
[2025-02-26 21:07:50] 2025-02-26 20:07:28,552 | INFO     | right removable region: 360
[2025-02-26 21:07:50] 2025-02-26 20:07:28,553 | INFO     | model: linear, x: [1740578476.0, 1740578537.0, 1740578598.0, 1740578659.0, 1740578720.0, 1740578781.0, 1740578842.0, 1740578903.0, 1740578964.0, 1740579025.0, 1740
[2025-02-26 21:07:50] 2025-02-26 20:07:28,555 | INFO     | sum of square deviations: 14588031660.0
[2025-02-26 21:07:50] 2025-02-26 20:07:28,559 | INFO     | sum of deviations: 80022034918.0
[2025-02-26 21:07:50] 2025-02-26 20:07:28,559 | INFO     | mean x: 1740589456.0
[2025-02-26 21:07:50] 2025-02-26 20:07:28,559 | INFO     | mean y: 2340119.6066481993
[2025-02-26 21:07:50] 2025-02-26 20:07:28,559 | INFO     | -- intersect: -9545590229.890182
[2025-02-26 21:07:50] 2025-02-26 20:07:28,559 | INFO     | intersect: -9545590229.890182
[2025-02-26 21:07:50] 2025-02-26 20:07:28,560 | INFO     | chi2: 2.55701884216926
[2025-02-26 21:07:50] 2025-02-26 20:07:28,560 | INFO     | current chi2=2.55701884216926 (change=49.27048647136558 %)
[2025-02-26 21:07:50] 2025-02-26 20:07:28,560 | INFO     | model: linear, x: [1740578781.0, 1740578842.0, 1740578903.0, 1740578964.0, 1740579025.0, 1740579086.0, 1740579147.0, 1740579208.0, 1740579269.0, 1740579330.0, 1740
[2025-02-26 21:07:50] 2025-02-26 20:07:28,561 | INFO     | sum of square deviations: 13990234405.0
[2025-02-26 21:07:50] 2025-02-26 20:07:28,564 | INFO     | sum of deviations: 10427278999.999996
[2025-02-26 21:07:50] 2025-02-26 20:07:28,564 | INFO     | mean x: 1740589608.5
[2025-02-26 21:07:50] 2025-02-26 20:07:28,564 | INFO     | mean y: 2357873.702247191
[2025-02-26 21:07:50] 2025-02-26 20:07:28,564 | INFO     | -- intersect: -1294948014.5996482
[2025-02-26 21:07:50] 2025-02-26 20:07:28,565 | INFO     | intersect: -1294948014.5996482
[2025-02-26 21:07:50] 2025-02-26 20:07:28,565 | INFO     | chi2: 1.1095018143624993
[2025-02-26 21:07:50] 2025-02-26 20:07:28,565 | INFO     | current chi2=1.1095018143624993 (change=56.609556563875465 %)
[2025-02-26 21:07:50] 2025-02-26 20:07:28,565 | INFO     | model: linear, x: [1740579086.0, 1740579147.0, 1740579208.0, 1740579269.0, 1740579330.0, 1740579391.0, 1740579452.0, 1740579513.0, 1740579574.0, 1740579635.0, 1740
[2025-02-26 21:07:50] 2025-02-26 20:07:28,566 | INFO     | sum of square deviations: 13408995600.0
[2025-02-26 21:07:50] 2025-02-26 20:07:28,569 | INFO     | sum of deviations: -4610859520.999996
[2025-02-26 21:07:50] 2025-02-26 20:07:28,569 | INFO     | mean x: 1740589761.0
[2025-02-26 21:07:50] 2025-02-26 20:07:28,569 | INFO     | mean y: 2361801.415954416
[2025-02-26 21:07:50] 2025-02-26 20:07:28,569 | INFO     | -- intersect: 600886486.7146772
[2025-02-26 21:07:50] 2025-02-26 20:07:28,570 | INFO     | intersect: 600886486.7146772
[2025-02-26 21:07:50] 2025-02-26 20:07:28,570 | INFO     | chi2: 1.018347157966491
[2025-02-26 21:07:50] 2025-02-26 20:07:28,570 | INFO     | current chi2=1.018347157966491 (change=8.21581859678024 %)
[2025-02-26 21:07:50] 2025-02-26 20:07:28,570 | INFO     | left removable region: 30
[2025-02-26 21:07:50] 2025-02-26 20:07:28,571 | INFO     | model: linear, x: [1740580001.0, 1740580062.0, 1740580123.0, 1740580184.0, 1740580245.0, 1740580306.0, 1740580367.0, 1740580428.0, 1740580489.0, 1740580550.0, 1740
[2025-02-26 21:07:50] 2025-02-26 20:07:28,573 | INFO     | sum of square deviations: 11143362422.5
[2025-02-26 21:07:50] 2025-02-26 20:07:28,576 | INFO     | sum of deviations: 12757464817.500006
[2025-02-26 21:07:50] 2025-02-26 20:07:28,576 | INFO     | mean x: 1740590035.5
[2025-02-26 21:07:50] 2025-02-26 20:07:28,576 | INFO     | mean y: 2370449.287878788
[2025-02-26 21:07:50] 2025-02-26 20:07:28,576 | INFO     | -- intersect: -1990341920.4315434
[2025-02-26 21:07:50] 2025-02-26 20:07:28,576 | INFO     | intersect: -1990341920.4315434
[2025-02-26 21:07:50] 2025-02-26 20:07:28,577 | INFO     | chi2: 0.0016377271129514388
[2025-02-26 21:07:50] 2025-02-26 20:07:28,577 | INFO     | -- intersect: -1990341920.4315434
[2025-02-26 21:07:50] 2025-02-26 20:07:28,577 | INFO     | current memory leak: 1.14 B/s (using 330 data points, chi2=0.00)
[2025-02-26 21:07:50] 2025-02-26 20:07:28,578 | INFO     | ..............................
[2025-02-26 21:07:50] 2025-02-26 20:07:28,578 | INFO     | . Timing measurements:
[2025-02-26 21:07:50] 2025-02-26 20:07:28,578 | INFO     | . get job = 0 s
[2025-02-26 21:07:50] 2025-02-26 20:07:28,578 | INFO     | . initial setup = 1 s
[2025-02-26 21:07:50] 2025-02-26 20:07:28,578 | INFO     | . payload setup = 8 s
[2025-02-26 21:07:50] 2025-02-26 20:07:28,578 | INFO     | . stage-in = 0 s
[2025-02-26 21:07:50] 2025-02-26 20:07:28,579 | INFO     | . payload execution = 22273 s
[2025-02-26 21:07:50] 2025-02-26 20:07:28,579 | INFO     | . stage-out = 1 s
[2025-02-26 21:07:50] 2025-02-26 20:07:28,579 | INFO     | . log creation = 0 s
[2025-02-26 21:07:50] 2025-02-26 20:07:28,579 | INFO     | ..............................
[2025-02-26 21:07:50] 2025-02-26 20:07:28,845 | WARNING  | process 3338530 can no longer be monitored (due to stat problems) - aborting
[2025-02-26 21:07:50] 2025-02-26 20:07:28,845 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6523787823/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 21:07:50] 2025-02-26 20:07:28,945 | INFO     | 
[2025-02-26 21:07:50] 2025-02-26 20:07:28,945 | INFO     | job summary report
[2025-02-26 21:07:50] 2025-02-26 20:07:28,945 | INFO     | --------------------------------------------------
[2025-02-26 21:07:50] 2025-02-26 20:07:28,945 | INFO     | PanDA job id: 6523787823
[2025-02-26 21:07:50] 2025-02-26 20:07:28,946 | INFO     | task id: 43205094
[2025-02-26 21:07:50] 2025-02-26 20:07:28,946 | INFO     | errors: (none)
[2025-02-26 21:07:50] 2025-02-26 20:07:28,946 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 21:07:50] 2025-02-26 20:07:28,946 | INFO     | pilot state: finished 
[2025-02-26 21:07:50] 2025-02-26 20:07:28,946 | INFO     | transexitcode: 0
[2025-02-26 21:07:50] 2025-02-26 20:07:28,946 | INFO     | exeerrorcode: 0
[2025-02-26 21:07:50] 2025-02-26 20:07:28,946 | INFO     | exeerrordiag: 
[2025-02-26 21:07:50] 2025-02-26 20:07:28,946 | INFO     | exitcode: 0
[2025-02-26 21:07:50] 2025-02-26 20:07:28,946 | INFO     | exitmsg: OK
[2025-02-26 21:07:50] 2025-02-26 20:07:28,946 | INFO     | cpuconsumptiontime: 86355 s
[2025-02-26 21:07:50] 2025-02-26 20:07:28,946 | INFO     | nevents: 400
[2025-02-26 21:07:50] 2025-02-26 20:07:28,947 | INFO     | neventsw: 0
[2025-02-26 21:07:50] 2025-02-26 20:07:28,947 | INFO     | pid: 3338530
[2025-02-26 21:07:50] 2025-02-26 20:07:28,947 | INFO     | pgrp: 3338530
[2025-02-26 21:07:50] 2025-02-26 20:07:28,947 | INFO     | corecount: 4
[2025-02-26 21:07:50] 2025-02-26 20:07:28,947 | INFO     | event service: False
[2025-02-26 21:07:50] 2025-02-26 20:07:28,947 | INFO     | sizes: {0: 2363608, 1: 2363807, 8: 2364013, 11: 2364041, 22286: 2397581, 22287: 2406728, 22294: 2406842}
[2025-02-26 21:07:50] 2025-02-26 20:07:28,947 | INFO     | --------------------------------------------------
[2025-02-26 21:07:50] 2025-02-26 20:07:28,947 | INFO     | 
[2025-02-26 21:07:50] 2025-02-26 20:07:28,947 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-02-26 21:07:50] 2025-02-26 20:07:28,980 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 21:07:50] 2025-02-26 20:07:28,981 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 21:07:50] 2025-02-26 20:07:28,981 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 21:07:50] 2025-02-26 20:07:28,981 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 21:07:50] 2025-02-26 20:07:28,981 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 21:07:50] 2025-02-26 20:07:28,981 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 21:07:50] 2025-02-26 20:07:28,981 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 21:07:50] 2025-02-26 20:07:28,981 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 21:07:50] 2025-02-26 20:07:28,981 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 21:07:50] 2025-02-26 20:07:28,982 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 21:07:50] 2025-02-26 20:07:28,982 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 21:07:50] 2025-02-26 20:07:28,982 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 21:07:50] 2025-02-26 20:07:28,982 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 21:07:50] 2025-02-26 20:07:28,982 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 21:07:50] 2025-02-26 20:07:28,982 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 21:07:50] 2025-02-26 20:07:28,982 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 21:07:50] 2025-02-26 20:07:28,982 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 21:07:50] 2025-02-26 20:07:28,982 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 21:07:50] 2025-02-26 20:07:28,982 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 21:07:50] 2025-02-26 20:07:28,983 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 21:07:50] 2025-02-26 20:07:28,983 | INFO     | job 6523787823 has completed (purged errors)
[2025-02-26 21:07:50] 2025-02-26 20:07:28,983 | INFO     | overall cleanup function is called
[2025-02-26 21:07:50] 2025-02-26 20:07:29,178 | INFO     | number of running child processes to parent process 3338530: 1
[2025-02-26 21:07:50] 2025-02-26 20:07:29,178 | INFO     | maximum number of monitored processes: 6
[2025-02-26 21:07:50] 2025-02-26 20:07:29,179 | INFO     | aborting job monitoring since job object (job id=6523787823) has expired
[2025-02-26 21:07:50] 2025-02-26 20:07:29,993 | INFO     | --- collectZombieJob: --- 10, [3338530]
[2025-02-26 21:07:50] 2025-02-26 20:07:29,993 | INFO     | zombie collector waiting for pid 3338530
[2025-02-26 21:07:50] 2025-02-26 20:07:29,993 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 21:07:50] 2025-02-26 20:07:29,993 | INFO     | collected zombie processes
[2025-02-26 21:07:50] 2025-02-26 20:07:29,993 | INFO     | will attempt to kill all subprocesses of pid=3338530
[2025-02-26 21:07:50] 2025-02-26 20:07:30,318 | INFO     | process IDs to be killed: [3338530] (in reverse order)
[2025-02-26 21:07:50] 2025-02-26 20:07:30,625 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 21:07:50] 2025-02-26 20:07:30,626 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 21:07:50] 2025-02-26 20:07:30,651 | INFO     | did not find any defunct processes belonging to 3338530
[2025-02-26 21:07:50] 2025-02-26 20:07:30,669 | INFO     | did not find any defunct processes belonging to 3338530
[2025-02-26 21:07:50] 2025-02-26 20:07:30,670 | INFO     | ready for new job
[2025-02-26 21:07:50] 2025-02-26 20:07:30,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 21:07:50] 2025-02-26 20:07:30,673 | INFO     | **************************************
[2025-02-26 21:07:50] 2025-02-26 20:07:30,673 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 21:07:50] 2025-02-26 20:07:30,674 | INFO     | **************************************
[2025-02-26 21:07:50] 2025-02-26 20:07:30,674 | INFO     | 
[2025-02-26 21:07:50] 2025-02-26 20:07:30,682 | INFO     | architecture information:
[2025-02-26 21:07:50] 2025-02-26 20:07:30,683 | INFO     | executing command: cat /etc/os-release
[2025-02-26 21:07:50] 2025-02-26 20:07:30,710 | INFO     | cat /etc/os-release:
[2025-02-26 21:07:50] NAME="CentOS Linux"
[2025-02-26 21:07:50] VERSION="7 (Core)"
[2025-02-26 21:07:50] ID="centos"
[2025-02-26 21:07:50] ID_LIKE="rhel fedora"
[2025-02-26 21:07:50] VERSION_ID="7"
[2025-02-26 21:07:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 21:07:50] ANSI_COLOR="0;31"
[2025-02-26 21:07:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 21:07:50] HOME_URL="https://www.centos.org/"
[2025-02-26 21:07:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 21:07:50] 
[2025-02-26 21:07:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 21:07:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 21:07:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 21:07:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 21:07:50] 
[2025-02-26 21:07:50] 2025-02-26 20:07:30,710 | INFO     | **************************************
[2025-02-26 21:07:50] 2025-02-26 20:07:31,213 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-02-26 21:07:50] 2025-02-26 20:07:31,238 | INFO     | sufficient remaining disk space (3329397620736 B)
[2025-02-26 21:07:50] 2025-02-26 20:07:31,238 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 21:07:50] 2025-02-26 20:07:31,238 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 21:07:50] 2025-02-26 20:07:31,239 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-26 21:07:50] 2025-02-26 20:07:31,239 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 21:07:50] 2025-02-26 20:07:31,239 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 21:07:50] 2025-02-26 20:07:31,239 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 21:07:50] 2025-02-26 20:07:31,682 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-26 21:07:50] 2025-02-26 20:07:31,682 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-26 21:07:50] 2025-02-26 20:07:31,682 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 21:07:50] 2025-02-26 20:07:31,682 | INFO     | will abort loop
[2025-02-26 21:07:50] 2025-02-26 20:07:32,068 | INFO     | all job control threads have been joined
[2025-02-26 21:07:50] 2025-02-26 20:07:32,082 | INFO     | all payload control threads have been joined
[2025-02-26 21:07:50] 2025-02-26 20:07:32,149 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 21:07:50] 2025-02-26 20:07:32,182 | INFO     | all data control threads have been joined
[2025-02-26 21:07:50] 2025-02-26 20:07:32,242 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 21:07:50] 2025-02-26 20:07:32,244 | INFO     | [job] retrieve thread has finished
[2025-02-26 21:07:50] 2025-02-26 20:07:32,462 | INFO     | [payload] validate_post thread has finished
[2025-02-26 21:07:50] 2025-02-26 20:07:32,688 | INFO     | [job] job monitor thread has finished
[2025-02-26 21:07:50] 2025-02-26 20:07:33,076 | INFO     | [job] control thread has finished
[2025-02-26 21:07:50] 2025-02-26 20:07:33,087 | INFO     | [payload] control thread has finished
[2025-02-26 21:07:50] 2025-02-26 20:07:33,155 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 21:07:50] 2025-02-26 20:07:33,164 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 21:07:50] 2025-02-26 20:07:33,187 | INFO     | [data] control thread has finished
[2025-02-26 21:07:50] 2025-02-26 20:07:33,302 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 21:07:50] 2025-02-26 20:07:33,551 | INFO     | [data] copytool_in thread has finished
[2025-02-26 21:07:50] 2025-02-26 20:07:33,553 | INFO     | [payload] failed_post thread has finished
[2025-02-26 21:07:50] 2025-02-26 20:07:33,571 | INFO     | [job] validate thread has finished
[2025-02-26 21:07:50] 2025-02-26 20:07:33,696 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 21:07:50] 2025-02-26 20:07:34,154 | INFO     | [data] copytool_out thread has finished
[2025-02-26 21:07:50] 2025-02-26 20:07:34,701 | INFO     | [job] queue monitor thread has finished
[2025-02-26 21:07:50] 2025-02-26 20:07:36,248 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 21:07:50] 2025-02-26 20:07:41,878 | INFO     | job.realtimelogging is not enabled
[2025-02-26 21:07:50] 2025-02-26 20:07:42,883 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 21:07:50] 2025-02-26 20:07:44,901 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22976266311488)>', '<ExcThread(monitor, started 22976030275328)>']
[2025-02-26 21:07:50] 2025-02-26 20:07:45,311 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 21:07:50] 2025-02-26 20:07:45,311 | INFO     | [monitor] control thread has ended
[2025-02-26 21:07:50] 2025-02-26 20:07:49,926 | INFO     | all workflow threads have been joined
[2025-02-26 21:07:50] 2025-02-26 20:07:49,926 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 21:07:50] 2025-02-26 20:07:49,926 | INFO     | traces error code: 0
[2025-02-26 21:07:50] 2025-02-26 20:07:49,926 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 21:07:50] 2025-02-26 20:07:50,092 [wrapper] ==== pilot stdout END ====
[2025-02-26 21:07:50] 2025-02-26 20:07:50,095 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 21:07:50] 2025-02-26 20:07:50,100 [wrapper] pilotpid: 3330609
[2025-02-26 21:07:50] 2025-02-26 20:07:50,104 [wrapper] Pilot exit status: 0
[2025-02-26 21:07:50] 2025-02-26 20:07:50,119 [wrapper] pandaids: 6523787823
[2025-02-26 21:07:50] 2025-02-26 20:07:50,261 [wrapper] cleanup supervisor_pilot  847981 3330610
[2025-02-26 21:07:50] 2025-02-26 20:07:50,266 [wrapper] Test setup, not cleaning
[2025-02-26 21:07:50] 2025-02-26 20:07:50,275 [wrapper] apfmon messages muted
[2025-02-26 21:07:50] 2025-02-26 20:07:50,279 [wrapper] ==== wrapper stdout END ====
[2025-02-26 21:07:50] 2025-02-26 20:07:50,282 [wrapper] ==== wrapper stderr END ====
[2025-02-26 21:07:50]  *** Error codes and diagnostics ***
[2025-02-26 21:07:50]     "exeErrorCode": 0,
[2025-02-26 21:07:50]     "exeErrorDiag": "",
[2025-02-26 21:07:50]     "pilotErrorCode": 0,
[2025-02-26 21:07:50]     "pilotErrorDiag": "",
[2025-02-26 21:07:50]  *** Listing of results directory ***
[2025-02-26 21:07:50] total 662124
[2025-02-26 21:07:50] -rw-r--r-- 1 boinc boinc    491065 Feb 23 06:22 pilot3.tar.gz
[2025-02-26 21:07:50] -rwx------ 1 boinc boinc     35865 Feb 23 06:38 runpilot2-wrapper.sh
[2025-02-26 21:07:50] -rw-r--r-- 1 boinc boinc      5118 Feb 23 06:38 queuedata.json
[2025-02-26 21:07:50] -rw-r--r-- 1 boinc boinc       100 Feb 26 14:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 21:07:50] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 14:55 run_atlas
[2025-02-26 21:07:50] -rw-r--r-- 1 boinc boinc       105 Feb 26 14:55 job.xml
[2025-02-26 21:07:50] -rw-r--r-- 2 boinc boinc 341983493 Feb 26 14:55 EVNT.43092757._001950.pool.root.1
[2025-02-26 21:07:50] -rw-r--r-- 1 boinc boinc      6675 Feb 26 14:55 init_data.xml
[2025-02-26 21:07:50] -rw-r--r-- 2 boinc boinc     17569 Feb 26 14:55 start_atlas.sh
[2025-02-26 21:07:50] drwxrwx--x 2 boinc boinc      4096 Feb 26 14:55 shared
[2025-02-26 21:07:50] -rw-r--r-- 2 boinc boinc    503553 Feb 26 14:55 input.tar.gz
[2025-02-26 21:07:50] -rw-r--r-- 1 boinc boinc         0 Feb 26 14:55 boinc_lockfile
[2025-02-26 21:07:50] -rw-r--r-- 1 boinc boinc      2547 Feb 26 14:55 pandaJob.out
[2025-02-26 21:07:50] -rw------- 1 boinc boinc       424 Feb 26 14:55 setup.sh.local
[2025-02-26 21:07:50] -rw------- 1 boinc boinc    990212 Feb 26 14:55 agis_schedconf.cvmfs.json
[2025-02-26 21:07:50] drwx------ 4 boinc boinc      4096 Feb 26 14:55 pilot3
[2025-02-26 21:07:50] -rw------- 1 boinc boinc 325967441 Feb 26 21:06 HITS.43205094._038250.pool.root.1
[2025-02-26 21:07:50] -rw-r--r-- 1 boinc boinc       532 Feb 26 21:06 boinc_task_state.xml
[2025-02-26 21:07:50] -rw------- 1 boinc boinc        95 Feb 26 21:07 pilot_heartbeat.json
[2025-02-26 21:07:50] -rw------- 1 boinc boinc      1036 Feb 26 21:07 memory_monitor_summary.json
[2025-02-26 21:07:50] -rw------- 1 boinc boinc   1569202 Feb 26 21:07 agis_ddmendpoints.agis.ALL.json
[2025-02-26 21:07:50] -rw------- 1 boinc boinc    460482 Feb 26 21:07 log.43205094._038250.job.log.tgz.1
[2025-02-26 21:07:50] -rw------- 1 boinc boinc      7697 Feb 26 21:07 heartbeat.json
[2025-02-26 21:07:50] -rw------- 1 boinc boinc      4607 Feb 26 21:07 pilotlog.txt
[2025-02-26 21:07:50] -rw-r--r-- 1 boinc boinc      8192 Feb 26 21:07 boinc_mmap_file
[2025-02-26 21:07:50] -rw------- 1 boinc boinc   2672558 Feb 26 21:07 log.43205094._038250.job.log.1
[2025-02-26 21:07:50] -rw-r--r-- 1 boinc boinc        28 Feb 26 21:07 wrapper_checkpoint.txt
[2025-02-26 21:07:50] -rw------- 1 boinc boinc       357 Feb 26 21:07 output.list
[2025-02-26 21:07:50] -rw-r--r-- 1 boinc boinc       620 Feb 26 21:07 runtime_log
[2025-02-26 21:07:50] -rw------- 1 boinc boinc   3153920 Feb 26 21:07 result.tar.gz
[2025-02-26 21:07:50] -rw-r--r-- 1 boinc boinc     11424 Feb 26 21:07 runtime_log.err
[2025-02-26 21:07:50] -rw------- 1 boinc boinc       666 Feb 26 21:07 EUPNDmUsJ66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm64uKDmNNpuAn.diag
[2025-02-26 21:07:50] -rw-r--r-- 1 boinc boinc     21440 Feb 26 21:07 stderr.txt
[2025-02-26 21:07:50] HITS file was successfully produced:
[2025-02-26 21:07:50] -rw------- 1 boinc boinc 325967441 Feb 26 21:06 shared/HITS.pool.root.1
[2025-02-26 21:07:50]  *** Contents of shared directory: ***
[2025-02-26 21:07:50] total 655900
[2025-02-26 21:07:50] -rw-r--r-- 2 boinc boinc 341983493 Feb 26 14:55 ATLAS.root_0
[2025-02-26 21:07:50] -rw-r--r-- 2 boinc boinc     17569 Feb 26 14:55 start_atlas.sh
[2025-02-26 21:07:50] -rw-r--r-- 2 boinc boinc    503553 Feb 26 14:55 input.tar.gz
[2025-02-26 21:07:50] -rw------- 1 boinc boinc 325967441 Feb 26 21:06 HITS.pool.root.1
[2025-02-26 21:07:50] -rw------- 1 boinc boinc   3153920 Feb 26 21:07 result.tar.gz
21:07:52 (3326647): run_atlas exited; CPU time 86016.927248
21:07:52 (3326647): called boinc_finish(0)

</stderr_txt>
]]>

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