Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:38:31 (2502338): wrapper (7.7.26015): starting
14:38:31 (2502338): wrapper: running run_atlas (--nthreads 4)
[2025-02-26 14:38:31] Arguments: --nthreads 4
[2025-02-26 14:38:31] Threads: 4
[2025-02-26 14:38:31] Checking for CVMFS
[2025-02-26 14:38:31] No cvmfs_config command found, will try listing directly
[2025-02-26 14:38:31] CVMFS is ok
[2025-02-26 14:38:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-26 14:38:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-26 14:38:31] Further information can be found at the LHC@home message board.
[2025-02-26 14:38:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 14:38:31] Checking for apptainer binary...
[2025-02-26 14:38:31] which: no apptainer in ((null))
[2025-02-26 14:38:31] apptainer is not installed, using version from CVMFS
[2025-02-26 14:38:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 14:38:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-02-26 14:38:31] apptainer works
[2025-02-26 14:38:31] Set ATHENA_PROC_NUMBER=4
[2025-02-26 14:38:31] Set ATHENA_CORE_NUMBER=4
[2025-02-26 14:38:31] Starting ATLAS job with PandaID=6523359210
[2025-02-26 14:38:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 20:46:09]  *** The last 200 lines of the pilot log: ***
[2025-02-26 20:46:09] 2025-02-26 19:45:56,019 | INFO     | chi2: 4.052072337044814
[2025-02-26 20:46:09] 2025-02-26 19:45:56,020 | INFO     | model: linear, x: [1740577163.0, 1740577224.0, 1740577285.0, 1740577346.0, 1740577407.0, 1740577468.0, 1740577529.0, 1740577590.0, 1740577651.0, 1740577712.0, 1740
[2025-02-26 20:46:09] 2025-02-26 19:45:56,020 | INFO     | sum of square deviations: 13990234405.0
[2025-02-26 20:46:09] 2025-02-26 19:45:56,023 | INFO     | sum of deviations: 150236892832.49997
[2025-02-26 20:46:09] 2025-02-26 19:45:56,024 | INFO     | mean x: 1740587990.5
[2025-02-26 20:46:09] 2025-02-26 19:45:56,024 | INFO     | mean y: 2339702.963483146
[2025-02-26 20:46:09] 2025-02-26 19:45:56,024 | INFO     | -- intersect: -18689307900.941334
[2025-02-26 20:46:09] 2025-02-26 19:45:56,024 | INFO     | intersect: -18689307900.941334
[2025-02-26 20:46:09] 2025-02-26 19:45:56,024 | INFO     | chi2: 3.2991347383716656
[2025-02-26 20:46:09] 2025-02-26 19:45:56,024 | INFO     | current chi2=3.2991347383716656 (change=18.581543863115428 %)
[2025-02-26 20:46:09] 2025-02-26 19:45:56,024 | INFO     | right removable region: 355
[2025-02-26 20:46:09] 2025-02-26 19:45:56,025 | INFO     | model: linear, x: [1740577468.0, 1740577529.0, 1740577590.0, 1740577651.0, 1740577712.0, 1740577773.0, 1740577834.0, 1740577895.0, 1740577956.0, 1740578017.0, 1740
[2025-02-26 20:46:09] 2025-02-26 19:45:56,028 | INFO     | sum of square deviations: 13990234405.0
[2025-02-26 20:46:09] 2025-02-26 19:45:56,031 | INFO     | sum of deviations: 53811319671.5
[2025-02-26 20:46:09] 2025-02-26 19:45:56,031 | INFO     | mean x: 1740588295.5
[2025-02-26 20:46:09] 2025-02-26 19:45:56,032 | INFO     | mean y: 2353880.356741573
[2025-02-26 20:46:09] 2025-02-26 19:45:56,032 | INFO     | -- intersect: -6692555616.809885
[2025-02-26 20:46:09] 2025-02-26 19:45:56,032 | INFO     | intersect: -6692555616.809885
[2025-02-26 20:46:09] 2025-02-26 19:45:56,032 | INFO     | chi2: 2.0351424017766826
[2025-02-26 20:46:09] 2025-02-26 19:45:56,032 | INFO     | current chi2=2.0351424017766826 (change=49.77526972628241 %)
[2025-02-26 20:46:09] 2025-02-26 19:45:56,033 | INFO     | model: linear, x: [1740577773.0, 1740577834.0, 1740577895.0, 1740577956.0, 1740578017.0, 1740578078.0, 1740578139.0, 1740578200.0, 1740578261.0, 1740578322.0, 1740
[2025-02-26 20:46:09] 2025-02-26 19:45:56,033 | INFO     | sum of square deviations: 13408995600.0
[2025-02-26 20:46:09] 2025-02-26 19:45:56,036 | INFO     | sum of deviations: -8576552175.99999
[2025-02-26 20:46:09] 2025-02-26 19:45:56,036 | INFO     | mean x: 1740588448.0
[2025-02-26 20:46:09] 2025-02-26 19:45:56,037 | INFO     | mean y: 2370249.5698005697
[2025-02-26 20:46:09] 2025-02-26 19:45:56,037 | INFO     | -- intersect: 1115671207.1161544
[2025-02-26 20:46:09] 2025-02-26 19:45:56,037 | INFO     | intersect: 1115671207.1161544
[2025-02-26 20:46:09] 2025-02-26 19:45:56,037 | INFO     | chi2: 0.8396465202018277
[2025-02-26 20:46:09] 2025-02-26 19:45:56,037 | INFO     | current chi2=0.8396465202018277 (change=58.74261577623192 %)
[2025-02-26 20:46:09] 2025-02-26 19:45:56,038 | INFO     | model: linear, x: [1740578078.0, 1740578139.0, 1740578200.0, 1740578261.0, 1740578322.0, 1740578383.0, 1740578444.0, 1740578505.0, 1740578566.0, 1740578627.0, 1740
[2025-02-26 20:46:09] 2025-02-26 19:45:56,038 | INFO     | sum of square deviations: 12844082682.5
[2025-02-26 20:46:09] 2025-02-26 19:45:56,041 | INFO     | sum of deviations: -18375065471.500004
[2025-02-26 20:46:09] 2025-02-26 19:45:56,041 | INFO     | mean x: 1740588600.5
[2025-02-26 20:46:09] 2025-02-26 19:45:56,041 | INFO     | mean y: 2372878.309248555
[2025-02-26 20:46:09] 2025-02-26 19:45:56,041 | INFO     | -- intersect: 2492502402.0557227
[2025-02-26 20:46:09] 2025-02-26 19:45:56,041 | INFO     | intersect: 2492502402.0557227
[2025-02-26 20:46:09] 2025-02-26 19:45:56,042 | INFO     | chi2: 0.7853287571249978
[2025-02-26 20:46:09] 2025-02-26 19:45:56,042 | INFO     | current chi2=0.7853287571249978 (change=6.469122633149651 %)
[2025-02-26 20:46:09] 2025-02-26 19:45:56,042 | INFO     | left removable region: 30
[2025-02-26 20:46:09] 2025-02-26 19:45:56,042 | INFO     | model: linear, x: [1740578993.0, 1740579054.0, 1740579115.0, 1740579176.0, 1740579237.0, 1740579298.0, 1740579359.0, 1740579420.0, 1740579481.0, 1740579542.0, 1740
[2025-02-26 20:46:09] 2025-02-26 19:45:56,044 | INFO     | sum of square deviations: 10644478650.0
[2025-02-26 20:46:09] 2025-02-26 19:45:56,047 | INFO     | sum of deviations: 10284373141.000004
[2025-02-26 20:46:09] 2025-02-26 19:45:56,047 | INFO     | mean x: 1740588875.0
[2025-02-26 20:46:09] 2025-02-26 19:45:56,047 | INFO     | mean y: 2376706.227692308
[2025-02-26 20:46:09] 2025-02-26 19:45:56,047 | INFO     | -- intersect: -1679327589.8839273
[2025-02-26 20:46:09] 2025-02-26 19:45:56,047 | INFO     | intersect: -1679327589.8839273
[2025-02-26 20:46:09] 2025-02-26 19:45:56,047 | INFO     | chi2: 0.004748718435493319
[2025-02-26 20:46:09] 2025-02-26 19:45:56,048 | INFO     | -- intersect: -1679327589.8839273
[2025-02-26 20:46:09] 2025-02-26 19:45:56,048 | INFO     | current memory leak: 0.97 B/s (using 325 data points, chi2=0.00)
[2025-02-26 20:46:09] 2025-02-26 19:45:56,049 | INFO     | ..............................
[2025-02-26 20:46:09] 2025-02-26 19:45:56,049 | INFO     | . Timing measurements:
[2025-02-26 20:46:09] 2025-02-26 19:45:56,049 | INFO     | . get job = 0 s
[2025-02-26 20:46:09] 2025-02-26 19:45:56,049 | INFO     | . initial setup = 1 s
[2025-02-26 20:46:09] 2025-02-26 19:45:56,049 | INFO     | . payload setup = 9 s
[2025-02-26 20:46:09] 2025-02-26 19:45:56,049 | INFO     | . stage-in = 0 s
[2025-02-26 20:46:09] 2025-02-26 19:45:56,050 | INFO     | . payload execution = 21987 s
[2025-02-26 20:46:09] 2025-02-26 19:45:56,050 | INFO     | . stage-out = 1 s
[2025-02-26 20:46:09] 2025-02-26 19:45:56,050 | INFO     | . log creation = 0 s
[2025-02-26 20:46:09] 2025-02-26 19:45:56,050 | INFO     | ..............................
[2025-02-26 20:46:09] 2025-02-26 19:45:56,150 | INFO     | 
[2025-02-26 20:46:09] 2025-02-26 19:45:56,150 | INFO     | job summary report
[2025-02-26 20:46:09] 2025-02-26 19:45:56,150 | INFO     | --------------------------------------------------
[2025-02-26 20:46:09] 2025-02-26 19:45:56,150 | INFO     | PanDA job id: 6523359210
[2025-02-26 20:46:09] 2025-02-26 19:45:56,150 | INFO     | task id: 43078919
[2025-02-26 20:46:09] 2025-02-26 19:45:56,151 | INFO     | errors: (none)
[2025-02-26 20:46:09] 2025-02-26 19:45:56,151 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 20:46:09] 2025-02-26 19:45:56,151 | INFO     | pilot state: finished 
[2025-02-26 20:46:09] 2025-02-26 19:45:56,151 | INFO     | transexitcode: 0
[2025-02-26 20:46:09] 2025-02-26 19:45:56,151 | INFO     | exeerrorcode: 0
[2025-02-26 20:46:09] 2025-02-26 19:45:56,151 | INFO     | exeerrordiag: 
[2025-02-26 20:46:09] 2025-02-26 19:45:56,151 | INFO     | exitcode: 0
[2025-02-26 20:46:09] 2025-02-26 19:45:56,151 | INFO     | exitmsg: OK
[2025-02-26 20:46:09] 2025-02-26 19:45:56,151 | INFO     | cpuconsumptiontime: 83777 s
[2025-02-26 20:46:09] 2025-02-26 19:45:56,151 | INFO     | nevents: 400
[2025-02-26 20:46:09] 2025-02-26 19:45:56,151 | INFO     | neventsw: 0
[2025-02-26 20:46:09] 2025-02-26 19:45:56,152 | INFO     | pid: 2516098
[2025-02-26 20:46:09] 2025-02-26 19:45:56,152 | INFO     | pgrp: 2516098
[2025-02-26 20:46:09] 2025-02-26 19:45:56,152 | INFO     | corecount: 4
[2025-02-26 20:46:09] 2025-02-26 19:45:56,152 | INFO     | event service: False
[2025-02-26 20:46:09] 2025-02-26 19:45:56,152 | INFO     | sizes: {0: 2363604, 1: 2363803, 8: 2364009, 12: 2364037, 22001: 2397482, 22003: 2406445, 22004: 2406629, 22012: 2406799}
[2025-02-26 20:46:09] 2025-02-26 19:45:56,152 | INFO     | --------------------------------------------------
[2025-02-26 20:46:09] 2025-02-26 19:45:56,152 | INFO     | 
[2025-02-26 20:46:09] 2025-02-26 19:45:56,152 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-02-26 20:46:09] 2025-02-26 19:45:56,187 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 20:46:09] 2025-02-26 19:45:56,188 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 20:46:09] 2025-02-26 19:45:56,188 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 20:46:09] 2025-02-26 19:45:56,188 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 20:46:09] 2025-02-26 19:45:56,188 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 20:46:09] 2025-02-26 19:45:56,188 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 20:46:09] 2025-02-26 19:45:56,188 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 20:46:09] 2025-02-26 19:45:56,188 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 20:46:09] 2025-02-26 19:45:56,188 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 20:46:09] 2025-02-26 19:45:56,188 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 20:46:09] 2025-02-26 19:45:56,188 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 20:46:09] 2025-02-26 19:45:56,189 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 20:46:09] 2025-02-26 19:45:56,189 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 20:46:09] 2025-02-26 19:45:56,189 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 20:46:09] 2025-02-26 19:45:56,189 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 20:46:09] 2025-02-26 19:45:56,189 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 20:46:09] 2025-02-26 19:45:56,189 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 20:46:09] 2025-02-26 19:45:56,189 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 20:46:09] 2025-02-26 19:45:56,189 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 20:46:09] 2025-02-26 19:45:56,189 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 20:46:09] 2025-02-26 19:45:56,189 | INFO     | job 6523359210 has completed (purged errors)
[2025-02-26 20:46:09] 2025-02-26 19:45:56,190 | INFO     | overall cleanup function is called
[2025-02-26 20:46:09] 2025-02-26 19:45:56,309 | WARNING  | process 2516098 can no longer be monitored (due to stat problems) - aborting
[2025-02-26 20:46:09] 2025-02-26 19:45:56,808 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 20:46:09] 2025-02-26 19:45:56,808 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 20:46:09] 2025-02-26 19:45:56,809 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6523359210/payload.stdout) since it has not been created yet
[2025-02-26 20:46:09] 2025-02-26 19:45:56,810 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-02-26 20:46:09] 2025-02-26 19:45:56,833 | INFO     | sufficient remaining disk space (3334686638080 B)
[2025-02-26 20:46:09] 2025-02-26 19:45:56,833 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-02-26 20:46:09] 2025-02-26 19:45:56,833 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6523359210/HITS.43078919._088485.pool.root.1 since it does not exist
[2025-02-26 20:46:09] 2025-02-26 19:45:57,155 | INFO     | number of running child processes to parent process 2516098: 1
[2025-02-26 20:46:09] 2025-02-26 19:45:57,156 | INFO     | maximum number of monitored processes: 6
[2025-02-26 20:46:09] 2025-02-26 19:45:57,156 | INFO     | aborting job monitoring since job object (job id=6523359210) has expired
[2025-02-26 20:46:09] 2025-02-26 19:45:57,198 | INFO     | --- collectZombieJob: --- 10, [2516098]
[2025-02-26 20:46:09] 2025-02-26 19:45:57,199 | INFO     | zombie collector waiting for pid 2516098
[2025-02-26 20:46:09] 2025-02-26 19:45:57,199 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 20:46:09] 2025-02-26 19:45:57,199 | INFO     | collected zombie processes
[2025-02-26 20:46:09] 2025-02-26 19:45:57,199 | INFO     | will attempt to kill all subprocesses of pid=2516098
[2025-02-26 20:46:09] 2025-02-26 19:45:57,505 | INFO     | process IDs to be killed: [2516098] (in reverse order)
[2025-02-26 20:46:09] 2025-02-26 19:45:57,771 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 20:46:09] 2025-02-26 19:45:57,771 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 20:46:09] 2025-02-26 19:45:57,795 | INFO     | did not find any defunct processes belonging to 2516098
[2025-02-26 20:46:09] 2025-02-26 19:45:57,814 | INFO     | did not find any defunct processes belonging to 2516098
[2025-02-26 20:46:09] 2025-02-26 19:45:57,815 | INFO     | ready for new job
[2025-02-26 20:46:09] 2025-02-26 19:45:57,815 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 20:46:09] 2025-02-26 19:45:57,818 | INFO     | **************************************
[2025-02-26 20:46:09] 2025-02-26 19:45:57,819 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 20:46:09] 2025-02-26 19:45:57,819 | INFO     | **************************************
[2025-02-26 20:46:09] 2025-02-26 19:45:57,819 | INFO     | 
[2025-02-26 20:46:09] 2025-02-26 19:45:57,828 | INFO     | architecture information:
[2025-02-26 20:46:09] 2025-02-26 19:45:57,829 | INFO     | executing command: cat /etc/os-release
[2025-02-26 20:46:09] 2025-02-26 19:45:57,852 | INFO     | cat /etc/os-release:
[2025-02-26 20:46:09] NAME="CentOS Linux"
[2025-02-26 20:46:09] VERSION="7 (Core)"
[2025-02-26 20:46:09] ID="centos"
[2025-02-26 20:46:09] ID_LIKE="rhel fedora"
[2025-02-26 20:46:09] VERSION_ID="7"
[2025-02-26 20:46:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 20:46:09] ANSI_COLOR="0;31"
[2025-02-26 20:46:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 20:46:09] HOME_URL="https://www.centos.org/"
[2025-02-26 20:46:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 20:46:09] 
[2025-02-26 20:46:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 20:46:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 20:46:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 20:46:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 20:46:09] 
[2025-02-26 20:46:09] 2025-02-26 19:45:57,852 | INFO     | **************************************
[2025-02-26 20:46:09] 2025-02-26 19:45:58,355 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-02-26 20:46:09] 2025-02-26 19:45:58,377 | INFO     | sufficient remaining disk space (3334689783808 B)
[2025-02-26 20:46:09] 2025-02-26 19:45:58,377 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 20:46:09] 2025-02-26 19:45:58,377 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 20:46:09] 2025-02-26 19:45:58,378 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 20:46:09] 2025-02-26 19:45:58,378 | INFO     | aborting loop
[2025-02-26 20:46:09] 2025-02-26 19:45:58,378 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 20:46:09] 2025-02-26 19:45:58,585 | INFO     | all job control threads have been joined
[2025-02-26 20:46:09] 2025-02-26 19:45:58,926 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 20:46:09] 2025-02-26 19:45:59,201 | INFO     | all data control threads have been joined
[2025-02-26 20:46:09] 2025-02-26 19:45:59,377 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 20:46:09] 2025-02-26 19:45:59,377 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 20:46:09] 2025-02-26 19:45:59,377 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 20:46:09] 2025-02-26 19:45:59,379 | INFO     | [job] job monitor thread has finished
[2025-02-26 20:46:09] 2025-02-26 19:45:59,383 | INFO     | [job] retrieve thread has finished
[2025-02-26 20:46:09] 2025-02-26 19:45:59,531 | INFO     | [payload] failed_post thread has finished
[2025-02-26 20:46:09] 2025-02-26 19:45:59,531 | INFO     | [payload] validate_post thread has finished
[2025-02-26 20:46:09] 2025-02-26 19:45:59,591 | INFO     | [job] control thread has finished
[2025-02-26 20:46:09] 2025-02-26 19:45:59,733 | INFO     | all payload control threads have been joined
[2025-02-26 20:46:09] 2025-02-26 19:45:59,941 | INFO     | [data] copytool_in thread has finished
[2025-02-26 20:46:09] 2025-02-26 19:46:00,139 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 20:46:09] 2025-02-26 19:46:00,206 | INFO     | [data] control thread has finished
[2025-02-26 20:46:09] 2025-02-26 19:46:00,384 | INFO     | [data] copytool_out thread has finished
[2025-02-26 20:46:09] 2025-02-26 19:46:00,493 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 20:46:09] 2025-02-26 19:46:00,545 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 20:46:09] 2025-02-26 19:46:00,611 | INFO     | [job] validate thread has finished
[2025-02-26 20:46:09] 2025-02-26 19:46:00,711 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 20:46:09] 2025-02-26 19:46:00,739 | INFO     | [payload] control thread has finished
[2025-02-26 20:46:09] 2025-02-26 19:46:01,161 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 20:46:09] 2025-02-26 19:46:02,166 | INFO     | [job] queue monitor thread has finished
[2025-02-26 20:46:09] 2025-02-26 19:46:02,932 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 20:46:09] 2025-02-26 19:46:04,405 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22442204321600)>', '<ExcThread(monitor, started 22441963243264)>']
[2025-02-26 20:46:09] 2025-02-26 19:46:05,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 20:46:09] 2025-02-26 19:46:05,407 | INFO     | [monitor] control thread has ended
[2025-02-26 20:46:09] 2025-02-26 19:46:09,430 | INFO     | all workflow threads have been joined
[2025-02-26 20:46:09] 2025-02-26 19:46:09,431 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 20:46:09] 2025-02-26 19:46:09,431 | INFO     | traces error code: 0
[2025-02-26 20:46:09] 2025-02-26 19:46:09,431 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 20:46:09] 2025-02-26 19:46:09,578 [wrapper] ==== pilot stdout END ====
[2025-02-26 20:46:09] 2025-02-26 19:46:09,582 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 20:46:09] 2025-02-26 19:46:09,586 [wrapper] pilotpid: 2506341
[2025-02-26 20:46:09] 2025-02-26 19:46:09,590 [wrapper] Pilot exit status: 0
[2025-02-26 20:46:09] 2025-02-26 19:46:09,606 [wrapper] pandaids: 6523359210
[2025-02-26 20:46:09] 2025-02-26 19:46:09,748 [wrapper] cleanup supervisor_pilot   76245 2506342
[2025-02-26 20:46:09] 2025-02-26 19:46:09,753 [wrapper] Test setup, not cleaning
[2025-02-26 20:46:09] 2025-02-26 19:46:09,762 [wrapper] apfmon messages muted
[2025-02-26 20:46:09] 2025-02-26 19:46:09,769 [wrapper] ==== wrapper stdout END ====
[2025-02-26 20:46:09] 2025-02-26 19:46:09,772 [wrapper] ==== wrapper stderr END ====
[2025-02-26 20:46:09]  *** Error codes and diagnostics ***
[2025-02-26 20:46:09]     "exeErrorCode": 0,
[2025-02-26 20:46:09]     "exeErrorDiag": "",
[2025-02-26 20:46:09]     "pilotErrorCode": 0,
[2025-02-26 20:46:09]     "pilotErrorDiag": "",
[2025-02-26 20:46:09]  *** Listing of results directory ***
[2025-02-26 20:46:09] total 661852
[2025-02-26 20:46:09] -rw-r--r-- 1 boinc boinc    491065 Feb 22 20:00 pilot3.tar.gz
[2025-02-26 20:46:09] -rw-r--r-- 1 boinc boinc      5118 Feb 22 20:13 queuedata.json
[2025-02-26 20:46:09] -rwx------ 1 boinc boinc     35865 Feb 22 20:15 runpilot2-wrapper.sh
[2025-02-26 20:46:09] -rw-r--r-- 1 boinc boinc       100 Feb 26 14:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 20:46:09] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 14:38 run_atlas
[2025-02-26 20:46:09] -rw-r--r-- 1 boinc boinc       105 Feb 26 14:38 job.xml
[2025-02-26 20:46:09] -rw-r--r-- 2 boinc boinc 340084657 Feb 26 14:38 EVNT.43078917._000111.pool.root.1
[2025-02-26 20:46:09] -rw-r--r-- 1 boinc boinc      6677 Feb 26 14:38 init_data.xml
[2025-02-26 20:46:09] drwxrwx--x 2 boinc boinc      4096 Feb 26 14:38 shared
[2025-02-26 20:46:09] -rw-r--r-- 2 boinc boinc    503562 Feb 26 14:38 input.tar.gz
[2025-02-26 20:46:09] -rw-r--r-- 2 boinc boinc     17569 Feb 26 14:38 start_atlas.sh
[2025-02-26 20:46:09] -rw-r--r-- 1 boinc boinc         0 Feb 26 14:38 boinc_lockfile
[2025-02-26 20:46:09] -rw-r--r-- 1 boinc boinc      2543 Feb 26 14:38 pandaJob.out
[2025-02-26 20:46:09] -rw------- 1 boinc boinc       424 Feb 26 14:38 setup.sh.local
[2025-02-26 20:46:09] -rw------- 1 boinc boinc    990212 Feb 26 14:38 agis_schedconf.cvmfs.json
[2025-02-26 20:46:09] drwx------ 4 boinc boinc      4096 Feb 26 14:38 pilot3
[2025-02-26 20:46:09] -rw------- 1 boinc boinc 328178651 Feb 26 20:44 HITS.43078919._088485.pool.root.1
[2025-02-26 20:46:09] -rw-r--r-- 1 boinc boinc       532 Feb 26 20:45 boinc_task_state.xml
[2025-02-26 20:46:09] -rw------- 1 boinc boinc      1025 Feb 26 20:45 memory_monitor_summary.json
[2025-02-26 20:46:09] -rw------- 1 boinc boinc   1569202 Feb 26 20:45 agis_ddmendpoints.agis.ALL.json
[2025-02-26 20:46:09] -rw------- 1 boinc boinc    431437 Feb 26 20:45 log.43078919._088485.job.log.tgz.1
[2025-02-26 20:46:09] -rw-r--r-- 1 boinc boinc      8192 Feb 26 20:45 boinc_mmap_file
[2025-02-26 20:46:09] -rw-r--r-- 1 boinc boinc        28 Feb 26 20:45 wrapper_checkpoint.txt
[2025-02-26 20:46:09] -rw------- 1 boinc boinc      7694 Feb 26 20:45 heartbeat.json
[2025-02-26 20:46:09] -rw------- 1 boinc boinc        95 Feb 26 20:45 pilot_heartbeat.json
[2025-02-26 20:46:09] -rw------- 1 boinc boinc      4226 Feb 26 20:46 pilotlog.txt
[2025-02-26 20:46:09] -rw------- 1 boinc boinc   2408613 Feb 26 20:46 log.43078919._088485.job.log.1
[2025-02-26 20:46:09] -rw------- 1 boinc boinc       357 Feb 26 20:46 output.list
[2025-02-26 20:46:09] -rw-r--r-- 1 boinc boinc       620 Feb 26 20:46 runtime_log
[2025-02-26 20:46:09] -rw------- 1 boinc boinc   2856960 Feb 26 20:46 result.tar.gz
[2025-02-26 20:46:09] -rw-r--r-- 1 boinc boinc     11424 Feb 26 20:46 runtime_log.err
[2025-02-26 20:46:09] -rw------- 1 boinc boinc       666 Feb 26 20:46 5rYKDmK9956nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmJUuKDm9i58cn.diag
[2025-02-26 20:46:09] -rw-r--r-- 1 boinc boinc     21730 Feb 26 20:46 stderr.txt
[2025-02-26 20:46:09] HITS file was successfully produced:
[2025-02-26 20:46:09] -rw------- 1 boinc boinc 328178651 Feb 26 20:44 shared/HITS.pool.root.1
[2025-02-26 20:46:09]  *** Contents of shared directory: ***
[2025-02-26 20:46:09] total 655912
[2025-02-26 20:46:09] -rw-r--r-- 2 boinc boinc 340084657 Feb 26 14:38 ATLAS.root_0
[2025-02-26 20:46:09] -rw-r--r-- 2 boinc boinc    503562 Feb 26 14:38 input.tar.gz
[2025-02-26 20:46:09] -rw-r--r-- 2 boinc boinc     17569 Feb 26 14:38 start_atlas.sh
[2025-02-26 20:46:09] -rw------- 1 boinc boinc 328178651 Feb 26 20:44 HITS.pool.root.1
[2025-02-26 20:46:09] -rw------- 1 boinc boinc   2856960 Feb 26 20:46 result.tar.gz
20:46:11 (2502338): run_atlas exited; CPU time 83510.955682
20:46:11 (2502338): called boinc_finish(0)

</stderr_txt>
]]>

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