Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:38:57 (2467194): wrapper (7.7.26015): starting
21:38:57 (2467194): wrapper: running run_atlas (--nthreads 4)
[2025-02-25 21:38:57] Arguments: --nthreads 4
[2025-02-25 21:38:57] Threads: 4
[2025-02-25 21:38:57] Checking for CVMFS
[2025-02-25 21:38:57] No cvmfs_config command found, will try listing directly
[2025-02-25 21:38:57] CVMFS is ok
[2025-02-25 21:38:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 21:38:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 21:38:57] Further information can be found at the LHC@home message board.
[2025-02-25 21:38:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 21:38:57] Checking for apptainer binary...
[2025-02-25 21:38:57] which: no apptainer in ((null))
[2025-02-25 21:38:57] apptainer is not installed, using version from CVMFS
[2025-02-25 21:38:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 21:38:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-02-25 21:38:57] apptainer works
[2025-02-25 21:38:57] Set ATHENA_PROC_NUMBER=4
[2025-02-25 21:38:57] Set ATHENA_CORE_NUMBER=4
[2025-02-25 21:38:57] Starting ATLAS job with PandaID=6522951307
[2025-02-25 21:38:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 03:03:58]  *** The last 200 lines of the pilot log: ***
[2025-02-26 03:03:58] 2025-02-26 02:03:01,104 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-26 03:03:58] 2025-02-26 02:03:01,104 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-26 03:03:58] 2025-02-26 02:03:01,110 | INFO     | fitting pss+swap vs Time
[2025-02-26 03:03:58] 2025-02-26 02:03:01,111 | INFO     | model: linear, x: [1740515984.0, 1740516045.0, 1740516106.0, 1740516167.0, 1740516228.0, 1740516289.0, 1740516350.0, 1740516411.0, 1740516472.0, 1740516533.0, 1740
[2025-02-26 03:03:58] 2025-02-26 02:03:01,111 | INFO     | sum of square deviations: 9971385099.5
[2025-02-26 03:03:58] 2025-02-26 02:03:01,114 | INFO     | sum of deviations: 64728791834.99998
[2025-02-26 03:03:58] 2025-02-26 02:03:01,114 | INFO     | mean x: 1740525652.5
[2025-02-26 03:03:58] 2025-02-26 02:03:01,114 | INFO     | mean y: 2368366.5849056602
[2025-02-26 03:03:58] 2025-02-26 02:03:01,114 | INFO     | -- intersect: -11296174566.011217
[2025-02-26 03:03:58] 2025-02-26 02:03:01,114 | INFO     | intersect: -11296174566.011217
[2025-02-26 03:03:58] 2025-02-26 02:03:01,115 | INFO     | chi2: 3.407802179820651
[2025-02-26 03:03:58] 2025-02-26 02:03:01,115 | INFO     | model: linear, x: [1740515984.0, 1740516045.0, 1740516106.0, 1740516167.0, 1740516228.0, 1740516289.0, 1740516350.0, 1740516411.0, 1740516472.0, 1740516533.0, 1740
[2025-02-26 03:03:58] 2025-02-26 02:03:01,115 | INFO     | sum of square deviations: 9508390372.0
[2025-02-26 03:03:58] 2025-02-26 02:03:01,118 | INFO     | sum of deviations: 63505451414.00003
[2025-02-26 03:03:58] 2025-02-26 02:03:01,118 | INFO     | mean x: 1740525500.0
[2025-02-26 03:03:58] 2025-02-26 02:03:01,118 | INFO     | mean y: 2367963.5654952074
[2025-02-26 03:03:58] 2025-02-26 02:03:01,118 | INFO     | -- intersect: -11622402712.7176
[2025-02-26 03:03:58] 2025-02-26 02:03:01,118 | INFO     | intersect: -11622402712.7176
[2025-02-26 03:03:58] 2025-02-26 02:03:01,119 | INFO     | chi2: 3.4096797973234803
[2025-02-26 03:03:58] 2025-02-26 02:03:01,119 | INFO     | current chi2=3.4096797973234803 (change=-0.055097608480549704 %)
[2025-02-26 03:03:58] 2025-02-26 02:03:01,119 | INFO     | right removable region: 312
[2025-02-26 03:03:58] 2025-02-26 02:03:01,119 | INFO     | model: linear, x: [1740516289.0, 1740516350.0, 1740516411.0, 1740516472.0, 1740516533.0, 1740516594.0, 1740516655.0, 1740516716.0, 1740516777.0, 1740516838.0, 1740
[2025-02-26 03:03:58] 2025-02-26 02:03:01,122 | INFO     | sum of square deviations: 9508390372.0
[2025-02-26 03:03:58] 2025-02-26 02:03:01,124 | INFO     | sum of deviations: -2393290348.000001
[2025-02-26 03:03:58] 2025-02-26 02:03:01,124 | INFO     | mean x: 1740525805.0
[2025-02-26 03:03:58] 2025-02-26 02:03:01,124 | INFO     | mean y: 2390414.4568690094
[2025-02-26 03:03:58] 2025-02-26 02:03:01,125 | INFO     | -- intersect: 440485974.9649975
[2025-02-26 03:03:58] 2025-02-26 02:03:01,125 | INFO     | intersect: 440485974.9649975
[2025-02-26 03:03:58] 2025-02-26 02:03:01,125 | INFO     | chi2: 1.3282337209852688
[2025-02-26 03:03:58] 2025-02-26 02:03:01,125 | INFO     | current chi2=1.3282337209852688 (change=61.023743430577525 %)
[2025-02-26 03:03:58] 2025-02-26 02:03:01,125 | INFO     | model: linear, x: [1740516594.0, 1740516655.0, 1740516716.0, 1740516777.0, 1740516838.0, 1740516899.0, 1740516960.0, 1740517021.0, 1740517082.0, 1740517143.0, 1740
[2025-02-26 03:03:58] 2025-02-26 02:03:01,126 | INFO     | sum of square deviations: 9059954057.0
[2025-02-26 03:03:58] 2025-02-26 02:03:01,128 | INFO     | sum of deviations: -49744478097.500015
[2025-02-26 03:03:58] 2025-02-26 02:03:01,128 | INFO     | mean x: 1740525957.5
[2025-02-26 03:03:58] 2025-02-26 02:03:01,129 | INFO     | mean y: 2406517.100649351
[2025-02-26 03:03:58] 2025-02-26 02:03:01,129 | INFO     | -- intersect: 9558918043.126923
[2025-02-26 03:03:58] 2025-02-26 02:03:01,129 | INFO     | intersect: 9558918043.126923
[2025-02-26 03:03:58] 2025-02-26 02:03:01,129 | INFO     | chi2: 0.38919294272463906
[2025-02-26 03:03:58] 2025-02-26 02:03:01,129 | INFO     | current chi2=0.38919294272463906 (change=70.69845942204057 %)
[2025-02-26 03:03:58] 2025-02-26 02:03:01,130 | INFO     | model: linear, x: [1740516899.0, 1740516960.0, 1740517021.0, 1740517082.0, 1740517143.0, 1740517204.0, 1740517265.0, 1740517326.0, 1740517387.0, 1740517448.0, 1740
[2025-02-26 03:03:58] 2025-02-26 02:03:01,130 | INFO     | sum of square deviations: 8625843592.0
[2025-02-26 03:03:58] 2025-02-26 02:03:01,132 | INFO     | sum of deviations: -49511686816.99999
[2025-02-26 03:03:58] 2025-02-26 02:03:01,132 | INFO     | mean x: 1740526110.0
[2025-02-26 03:03:58] 2025-02-26 02:03:01,132 | INFO     | mean y: 2406411.105610561
[2025-02-26 03:03:58] 2025-02-26 02:03:01,132 | INFO     | -- intersect: 9992894035.41811
[2025-02-26 03:03:58] 2025-02-26 02:03:01,133 | INFO     | intersect: 9992894035.41811
[2025-02-26 03:03:58] 2025-02-26 02:03:01,133 | INFO     | chi2: 0.36008417934032233
[2025-02-26 03:03:58] 2025-02-26 02:03:01,133 | INFO     | current chi2=0.36008417934032233 (change=7.4792629024909365 %)
[2025-02-26 03:03:58] 2025-02-26 02:03:01,133 | INFO     | left removable region: 30
[2025-02-26 03:03:58] 2025-02-26 02:03:01,133 | INFO     | model: linear, x: [1740517814.0, 1740517875.0, 1740517936.0, 1740517997.0, 1740518058.0, 1740518119.0, 1740518180.0, 1740518241.0, 1740518302.0, 1740518363.0, 1740
[2025-02-26 03:03:58] 2025-02-26 02:03:01,134 | INFO     | sum of square deviations: 6953769450.5
[2025-02-26 03:03:58] 2025-02-26 02:03:01,136 | INFO     | sum of deviations: -4437307048.499997
[2025-02-26 03:03:58] 2025-02-26 02:03:01,136 | INFO     | mean x: 1740526384.5
[2025-02-26 03:03:58] 2025-02-26 02:03:01,136 | INFO     | mean y: 2389260.776595745
[2025-02-26 03:03:58] 2025-02-26 02:03:01,136 | INFO     | -- intersect: 1113045869.2562943
[2025-02-26 03:03:58] 2025-02-26 02:03:01,136 | INFO     | intersect: 1113045869.2562943
[2025-02-26 03:03:58] 2025-02-26 02:03:01,137 | INFO     | chi2: 0.1287101814235792
[2025-02-26 03:03:58] 2025-02-26 02:03:01,137 | INFO     | -- intersect: 1113045869.2562943
[2025-02-26 03:03:58] 2025-02-26 02:03:01,137 | INFO     | current memory leak: -0.64 B/s (using 282 data points, chi2=0.13)
[2025-02-26 03:03:58] 2025-02-26 02:03:01,138 | INFO     | ..............................
[2025-02-26 03:03:58] 2025-02-26 02:03:01,138 | INFO     | . Timing measurements:
[2025-02-26 03:03:58] 2025-02-26 02:03:01,138 | INFO     | . get job = 0 s
[2025-02-26 03:03:58] 2025-02-26 02:03:01,138 | INFO     | . initial setup = 1 s
[2025-02-26 03:03:58] 2025-02-26 02:03:01,138 | INFO     | . payload setup = 8 s
[2025-02-26 03:03:58] 2025-02-26 02:03:01,138 | INFO     | . stage-in = 0 s
[2025-02-26 03:03:58] 2025-02-26 02:03:01,139 | INFO     | . payload execution = 19391 s
[2025-02-26 03:03:58] 2025-02-26 02:03:01,139 | INFO     | . stage-out = 1 s
[2025-02-26 03:03:58] 2025-02-26 02:03:01,139 | INFO     | . log creation = 0 s
[2025-02-26 03:03:58] 2025-02-26 02:03:01,139 | INFO     | ..............................
[2025-02-26 03:03:58] 2025-02-26 02:03:01,379 | INFO     | 
[2025-02-26 03:03:58] 2025-02-26 02:03:01,380 | INFO     | job summary report
[2025-02-26 03:03:58] 2025-02-26 02:03:01,380 | INFO     | --------------------------------------------------
[2025-02-26 03:03:58] 2025-02-26 02:03:01,380 | INFO     | PanDA job id: 6522951307
[2025-02-26 03:03:58] 2025-02-26 02:03:01,380 | INFO     | task id: 43205094
[2025-02-26 03:03:58] 2025-02-26 02:03:01,380 | INFO     | errors: (none)
[2025-02-26 03:03:58] 2025-02-26 02:03:01,380 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 03:03:58] 2025-02-26 02:03:01,380 | INFO     | pilot state: finished 
[2025-02-26 03:03:58] 2025-02-26 02:03:01,380 | INFO     | transexitcode: 0
[2025-02-26 03:03:58] 2025-02-26 02:03:01,380 | INFO     | exeerrorcode: 0
[2025-02-26 03:03:58] 2025-02-26 02:03:01,381 | INFO     | exeerrordiag: 
[2025-02-26 03:03:58] 2025-02-26 02:03:01,381 | INFO     | exitcode: 0
[2025-02-26 03:03:58] 2025-02-26 02:03:01,381 | INFO     | exitmsg: OK
[2025-02-26 03:03:58] 2025-02-26 02:03:01,381 | INFO     | cpuconsumptiontime: 73456 s
[2025-02-26 03:03:58] 2025-02-26 02:03:01,381 | INFO     | nevents: 400
[2025-02-26 03:03:58] 2025-02-26 02:03:01,381 | INFO     | neventsw: 0
[2025-02-26 03:03:58] 2025-02-26 02:03:01,381 | INFO     | pid: 2478566
[2025-02-26 03:03:58] 2025-02-26 02:03:01,381 | INFO     | pgrp: 2478566
[2025-02-26 03:03:58] 2025-02-26 02:03:01,381 | INFO     | corecount: 4
[2025-02-26 03:03:58] 2025-02-26 02:03:01,381 | INFO     | event service: False
[2025-02-26 03:03:58] 2025-02-26 02:03:01,381 | INFO     | sizes: {0: 2370347, 7: 2370553, 11: 2370581, 19404: 2403201, 19406: 2412220, 19413: 2412334}
[2025-02-26 03:03:58] 2025-02-26 02:03:01,382 | INFO     | --------------------------------------------------
[2025-02-26 03:03:58] 2025-02-26 02:03:01,382 | INFO     | 
[2025-02-26 03:03:58] 2025-02-26 02:03:01,382 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/0
[2025-02-26 03:03:58] 2025-02-26 02:03:01,413 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 03:03:58] 2025-02-26 02:03:01,413 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 03:03:58] 2025-02-26 02:03:01,413 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 03:03:58] 2025-02-26 02:03:01,413 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 03:03:58] 2025-02-26 02:03:01,413 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 03:03:58] 2025-02-26 02:03:01,413 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 03:03:58] 2025-02-26 02:03:01,414 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 03:03:58] 2025-02-26 02:03:01,414 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 03:03:58] 2025-02-26 02:03:01,414 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 03:03:58] 2025-02-26 02:03:01,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 03:03:58] 2025-02-26 02:03:01,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 03:03:58] 2025-02-26 02:03:01,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 03:03:58] 2025-02-26 02:03:01,414 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 03:03:58] 2025-02-26 02:03:01,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 03:03:58] 2025-02-26 02:03:01,414 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 03:03:58] 2025-02-26 02:03:01,414 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 03:03:58] 2025-02-26 02:03:01,414 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 03:03:58] 2025-02-26 02:03:01,415 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 03:03:58] 2025-02-26 02:03:01,415 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 03:03:58] 2025-02-26 02:03:01,415 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 03:03:58] 2025-02-26 02:03:01,415 | INFO     | job 6522951307 has completed (purged errors)
[2025-02-26 03:03:58] 2025-02-26 02:03:01,415 | INFO     | overall cleanup function is called
[2025-02-26 03:03:58] 2025-02-26 02:03:02,423 | INFO     | --- collectZombieJob: --- 10, [2478566]
[2025-02-26 03:03:58] 2025-02-26 02:03:02,424 | INFO     | zombie collector waiting for pid 2478566
[2025-02-26 03:03:58] 2025-02-26 02:03:02,424 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 03:03:58] 2025-02-26 02:03:02,424 | INFO     | collected zombie processes
[2025-02-26 03:03:58] 2025-02-26 02:03:02,424 | INFO     | will attempt to kill all subprocesses of pid=2478566
[2025-02-26 03:03:58] 2025-02-26 02:03:02,749 | INFO     | process IDs to be killed: [2478566] (in reverse order)
[2025-02-26 03:03:58] 2025-02-26 02:03:02,971 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 03:03:58] 2025-02-26 02:03:02,971 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 03:03:58] 2025-02-26 02:03:02,995 | INFO     | did not find any defunct processes belonging to 2478566
[2025-02-26 03:03:58] 2025-02-26 02:03:03,013 | INFO     | did not find any defunct processes belonging to 2478566
[2025-02-26 03:03:58] 2025-02-26 02:03:03,013 | INFO     | ready for new job
[2025-02-26 03:03:58] 2025-02-26 02:03:03,013 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 03:03:58] 2025-02-26 02:03:03,016 | INFO     | **************************************
[2025-02-26 03:03:58] 2025-02-26 02:03:03,016 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 03:03:58] 2025-02-26 02:03:03,016 | INFO     | **************************************
[2025-02-26 03:03:58] 2025-02-26 02:03:03,016 | INFO     | 
[2025-02-26 03:03:58] 2025-02-26 02:03:03,024 | INFO     | architecture information:
[2025-02-26 03:03:58] 2025-02-26 02:03:03,024 | INFO     | executing command: cat /etc/os-release
[2025-02-26 03:03:58] 2025-02-26 02:03:03,049 | INFO     | cat /etc/os-release:
[2025-02-26 03:03:58] NAME="CentOS Linux"
[2025-02-26 03:03:58] VERSION="7 (Core)"
[2025-02-26 03:03:58] ID="centos"
[2025-02-26 03:03:58] ID_LIKE="rhel fedora"
[2025-02-26 03:03:58] VERSION_ID="7"
[2025-02-26 03:03:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 03:03:58] ANSI_COLOR="0;31"
[2025-02-26 03:03:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 03:03:58] HOME_URL="https://www.centos.org/"
[2025-02-26 03:03:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 03:03:58] 
[2025-02-26 03:03:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 03:03:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 03:03:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 03:03:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 03:03:58] 
[2025-02-26 03:03:58] 2025-02-26 02:03:03,049 | INFO     | **************************************
[2025-02-26 03:03:58] 2025-02-26 02:03:03,552 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2025-02-26 03:03:58] 2025-02-26 02:03:03,575 | INFO     | sufficient remaining disk space (3253461843968 B)
[2025-02-26 03:03:58] 2025-02-26 02:03:03,575 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 03:03:58] 2025-02-26 02:03:03,575 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 03:03:58] 2025-02-26 02:03:03,575 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 03:03:58] 2025-02-26 02:03:03,575 | INFO     | aborting loop
[2025-02-26 03:03:58] 2025-02-26 02:03:03,580 | INFO     | all job control threads have been joined
[2025-02-26 03:03:58] 2025-02-26 02:03:04,049 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 03:03:58] 2025-02-26 02:03:04,049 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 03:03:58] 2025-02-26 02:03:04,049 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 03:03:58] 2025-02-26 02:03:04,187 | INFO     | all data control threads have been joined
[2025-02-26 03:03:58] 2025-02-26 02:03:04,580 | INFO     | [job] retrieve thread has finished
[2025-02-26 03:03:58] 2025-02-26 02:03:04,581 | INFO     | [job] job monitor thread has finished
[2025-02-26 03:03:58] 2025-02-26 02:03:04,585 | INFO     | [job] control thread has finished
[2025-02-26 03:03:58] 2025-02-26 02:03:04,750 | INFO     | [payload] validate_post thread has finished
[2025-02-26 03:03:58] 2025-02-26 02:03:04,864 | INFO     | [payload] failed_post thread has finished
[2025-02-26 03:03:58] 2025-02-26 02:03:04,911 | INFO     | [job] validate thread has finished
[2025-02-26 03:03:58] 2025-02-26 02:03:04,942 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 03:03:58] 2025-02-26 02:03:05,024 | INFO     | all payload control threads have been joined
[2025-02-26 03:03:58] 2025-02-26 02:03:05,037 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 03:03:58] 2025-02-26 02:03:05,195 | INFO     | [data] control thread has finished
[2025-02-26 03:03:58] 2025-02-26 02:03:05,357 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 03:03:58] 2025-02-26 02:03:05,443 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 03:03:58] 2025-02-26 02:03:05,759 | INFO     | [data] copytool_in thread has finished
[2025-02-26 03:03:58] 2025-02-26 02:03:06,030 | INFO     | [payload] control thread has finished
[2025-02-26 03:03:58] 2025-02-26 02:03:06,073 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 03:03:58] 2025-02-26 02:03:06,239 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 03:03:58] 2025-02-26 02:03:06,947 | INFO     | [data] copytool_out thread has finished
[2025-02-26 03:03:58] 2025-02-26 02:03:07,244 | INFO     | [job] queue monitor thread has finished
[2025-02-26 03:03:58] 2025-02-26 02:03:09,043 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 03:03:58] 2025-02-26 02:03:14,174 | INFO     | job.realtimelogging is not enabled
[2025-02-26 03:03:58] 2025-02-26 02:03:15,179 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 03:03:58] 2025-02-26 02:03:16,798 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23303197267776)>', '<ExcThread(monitor, started 23302963693312)>']
[2025-02-26 03:03:58] 2025-02-26 02:03:17,109 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 03:03:58] 2025-02-26 02:03:17,110 | INFO     | [monitor] control thread has ended
[2025-02-26 03:03:58] 2025-02-26 02:03:21,823 | INFO     | all workflow threads have been joined
[2025-02-26 03:03:58] 2025-02-26 02:03:21,824 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 03:03:58] 2025-02-26 02:03:21,824 | INFO     | traces error code: 0
[2025-02-26 03:03:58] 2025-02-26 02:03:21,824 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 03:03:58] 2025-02-26 02:03:22,035 [wrapper] ==== pilot stdout END ====
[2025-02-26 03:03:58] 2025-02-26 02:03:22,039 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 03:03:58] 2025-02-26 02:03:22,043 [wrapper] pilotpid: 2471178
[2025-02-26 03:03:58] 2025-02-26 02:03:22,046 [wrapper] Pilot exit status: 0
[2025-02-26 03:03:58] 2025-02-26 02:03:22,059 [wrapper] pandaids: 6522951307
[2025-02-26 03:03:58] 2025-02-26 02:03:22,194 [wrapper] cleanup supervisor_pilot 3543662 2471179
[2025-02-26 03:03:58] 2025-02-26 02:03:22,198 [wrapper] Test setup, not cleaning
[2025-02-26 03:03:58] 2025-02-26 02:03:22,205 [wrapper] apfmon messages muted
[2025-02-26 03:03:58] 2025-02-26 02:03:22,209 [wrapper] ==== wrapper stdout END ====
[2025-02-26 03:03:58] 2025-02-26 02:03:22,212 [wrapper] ==== wrapper stderr END ====
[2025-02-26 03:03:58]  *** Error codes and diagnostics ***
[2025-02-26 03:03:58]     "exeErrorCode": 0,
[2025-02-26 03:03:58]     "exeErrorDiag": "",
[2025-02-26 03:03:58]     "pilotErrorCode": 0,
[2025-02-26 03:03:58]     "pilotErrorDiag": "",
[2025-02-26 03:03:58]  *** Listing of results directory ***
[2025-02-26 03:03:58] total 656328
[2025-02-26 03:03:58] -rw-r--r-- 1 boinc boinc    491065 Feb 22 11:59 pilot3.tar.gz
[2025-02-26 03:03:58] -rw-r--r-- 1 boinc boinc      5118 Feb 22 12:10 queuedata.json
[2025-02-26 03:03:58] -rwx------ 1 boinc boinc     35865 Feb 22 12:11 runpilot2-wrapper.sh
[2025-02-26 03:03:58] -rw-r--r-- 1 boinc boinc       100 Feb 25 21:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 03:03:58] -rwxr-xr-x 1 boinc boinc      7986 Feb 25 21:38 run_atlas
[2025-02-26 03:03:58] -rw-r--r-- 1 boinc boinc       105 Feb 25 21:38 job.xml
[2025-02-26 03:03:58] -rw-r--r-- 2 boinc boinc 340974716 Feb 25 21:38 EVNT.43092757._001794.pool.root.1
[2025-02-26 03:03:58] -rw-r--r-- 1 boinc boinc      6676 Feb 25 21:38 init_data.xml
[2025-02-26 03:03:58] drwxrwx--x 2 boinc boinc      4096 Feb 25 21:38 shared
[2025-02-26 03:03:58] -rw-r--r-- 2 boinc boinc    503560 Feb 25 21:38 input.tar.gz
[2025-02-26 03:03:58] -rw-r--r-- 2 boinc boinc     17569 Feb 25 21:38 start_atlas.sh
[2025-02-26 03:03:58] -rw-r--r-- 1 boinc boinc         0 Feb 25 21:38 boinc_lockfile
[2025-02-26 03:03:58] -rw-r--r-- 1 boinc boinc      2547 Feb 25 21:38 pandaJob.out
[2025-02-26 03:03:58] -rw------- 1 boinc boinc       424 Feb 25 21:38 setup.sh.local
[2025-02-26 03:03:58] -rw------- 1 boinc boinc    987490 Feb 25 21:39 agis_schedconf.cvmfs.json
[2025-02-26 03:03:58] drwx------ 4 boinc boinc      4096 Feb 25 21:39 pilot3
[2025-02-26 03:03:58] -rw------- 1 boinc boinc 322468085 Feb 26 03:02 HITS.43205094._035884.pool.root.1
[2025-02-26 03:03:58] -rw-r--r-- 1 boinc boinc       531 Feb 26 03:02 boinc_task_state.xml
[2025-02-26 03:03:58] -rw------- 1 boinc boinc        95 Feb 26 03:02 pilot_heartbeat.json
[2025-02-26 03:03:58] -rw------- 1 boinc boinc      1034 Feb 26 03:02 memory_monitor_summary.json
[2025-02-26 03:03:58] -rw------- 1 boinc boinc   1573632 Feb 26 03:02 agis_ddmendpoints.agis.ALL.json
[2025-02-26 03:03:58] -rw------- 1 boinc boinc    407468 Feb 26 03:02 log.43205094._035884.job.log.tgz.1
[2025-02-26 03:03:58] -rw------- 1 boinc boinc      7717 Feb 26 03:03 heartbeat.json
[2025-02-26 03:03:58] -rw------- 1 boinc boinc      4298 Feb 26 03:03 pilotlog.txt
[2025-02-26 03:03:58] -rw------- 1 boinc boinc   2012331 Feb 26 03:03 log.43205094._035884.job.log.1
[2025-02-26 03:03:58] -rw------- 1 boinc boinc       357 Feb 26 03:03 output.list
[2025-02-26 03:03:58] -rw-r--r-- 1 boinc boinc       620 Feb 26 03:03 runtime_log
[2025-02-26 03:03:58] -rw------- 1 boinc boinc   2437120 Feb 26 03:03 result.tar.gz
[2025-02-26 03:03:58] -rw-r--r-- 1 boinc boinc     11424 Feb 26 03:03 runtime_log.err
[2025-02-26 03:03:58] -rw------- 1 boinc boinc       666 Feb 26 03:03 4C8KDm6a256n9Rq4apOajLDm4fhM0noT9bVoFjIUDm0BeKDmw5Zy8n.diag
[2025-02-26 03:03:58] -rw-r--r-- 1 boinc boinc        27 Feb 26 03:03 wrapper_checkpoint.txt
[2025-02-26 03:03:58] -rw-r--r-- 1 boinc boinc      8192 Feb 26 03:03 boinc_mmap_file
[2025-02-26 03:03:58] -rw-r--r-- 1 boinc boinc     21266 Feb 26 03:03 stderr.txt
[2025-02-26 03:03:58] HITS file was successfully produced:
[2025-02-26 03:03:58] -rw------- 1 boinc boinc 322468085 Feb 26 03:02 shared/HITS.pool.root.1
[2025-02-26 03:03:58]  *** Contents of shared directory: ***
[2025-02-26 03:03:58] total 650796
[2025-02-26 03:03:58] -rw-r--r-- 2 boinc boinc 340974716 Feb 25 21:38 ATLAS.root_0
[2025-02-26 03:03:58] -rw-r--r-- 2 boinc boinc    503560 Feb 25 21:38 input.tar.gz
[2025-02-26 03:03:58] -rw-r--r-- 2 boinc boinc     17569 Feb 25 21:38 start_atlas.sh
[2025-02-26 03:03:58] -rw------- 1 boinc boinc 322468085 Feb 26 03:02 HITS.pool.root.1
[2025-02-26 03:03:58] -rw------- 1 boinc boinc   2437120 Feb 26 03:03 result.tar.gz
03:03:59 (2467194): run_atlas exited; CPU time 73170.518322
03:03:59 (2467194): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN