Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:31:45 (768632): wrapper (7.7.26015): starting
03:31:45 (768632): wrapper: running run_atlas (--nthreads 4)
[2025-02-26 03:31:45] Arguments: --nthreads 4
[2025-02-26 03:31:45] Threads: 4
[2025-02-26 03:31:45] Checking for CVMFS
[2025-02-26 03:31:45] No cvmfs_config command found, will try listing directly
[2025-02-26 03:31:45] CVMFS is ok
[2025-02-26 03:31:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-26 03:31:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-26 03:31:45] Further information can be found at the LHC@home message board.
[2025-02-26 03:31:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 03:31:45] Checking for apptainer binary...
[2025-02-26 03:31:45] which: no apptainer in ((null))
[2025-02-26 03:31:45] apptainer is not installed, using version from CVMFS
[2025-02-26 03:31:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 03:31:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2025-02-26 03:31:45] apptainer works
[2025-02-26 03:31:45] Set ATHENA_PROC_NUMBER=4
[2025-02-26 03:31:45] Set ATHENA_CORE_NUMBER=4
[2025-02-26 03:31:45] Starting ATLAS job with PandaID=6522519505
[2025-02-26 03:31:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 11:42:54]  *** The last 200 lines of the pilot log: ***
[2025-02-26 11:42:54] 2025-02-26 10:42:41,993 | INFO     | model: linear, x: [1740537140.0, 1740537201.0, 1740537262.0, 1740537323.0, 1740537384.0, 1740537445.0, 1740537506.0, 1740537567.0, 1740537628.0, 1740537689.0, 1740
[2025-02-26 11:42:54] 2025-02-26 10:42:41,993 | INFO     | sum of square deviations: 34939602082.0
[2025-02-26 11:42:54] 2025-02-26 10:42:41,997 | INFO     | sum of deviations: 86317228086.0
[2025-02-26 11:42:54] 2025-02-26 10:42:41,997 | INFO     | mean x: 1740551841.0
[2025-02-26 11:42:54] 2025-02-26 10:42:41,998 | INFO     | mean y: 2375221.3519668737
[2025-02-26 11:42:54] 2025-02-26 10:42:41,998 | INFO     | -- intersect: -4297605353.770377
[2025-02-26 11:42:54] 2025-02-26 10:42:41,998 | INFO     | intersect: -4297605353.770377
[2025-02-26 11:42:54] 2025-02-26 10:42:41,998 | INFO     | chi2: 4.020259293157541
[2025-02-26 11:42:54] 2025-02-26 10:42:41,999 | INFO     | model: linear, x: [1740537140.0, 1740537201.0, 1740537262.0, 1740537323.0, 1740537384.0, 1740537445.0, 1740537506.0, 1740537567.0, 1740537628.0, 1740537689.0, 1740
[2025-02-26 11:42:54] 2025-02-26 10:42:41,999 | INFO     | sum of square deviations: 33865712179.5
[2025-02-26 11:42:54] 2025-02-26 10:42:42,002 | INFO     | sum of deviations: 113735985167.0
[2025-02-26 11:42:54] 2025-02-26 10:42:42,003 | INFO     | mean x: 1740551688.5
[2025-02-26 11:42:54] 2025-02-26 10:42:42,003 | INFO     | mean y: 2379081.066945607
[2025-02-26 11:42:54] 2025-02-26 10:42:42,003 | INFO     | -- intersect: -5843160501.161782
[2025-02-26 11:42:54] 2025-02-26 10:42:42,003 | INFO     | intersect: -5843160501.161782
[2025-02-26 11:42:54] 2025-02-26 10:42:42,003 | INFO     | chi2: 3.36359654094598
[2025-02-26 11:42:54] 2025-02-26 10:42:42,003 | INFO     | current chi2=3.36359654094598 (change=16.333840788060552 %)
[2025-02-26 11:42:54] 2025-02-26 10:42:42,003 | INFO     | right removable region: 477
[2025-02-26 11:42:54] 2025-02-26 10:42:42,004 | INFO     | model: linear, x: [1740537445.0, 1740537506.0, 1740537567.0, 1740537628.0, 1740537689.0, 1740537750.0, 1740537811.0, 1740537872.0, 1740537933.0, 1740537994.0, 1740
[2025-02-26 11:42:54] 2025-02-26 10:42:42,004 | INFO     | sum of square deviations: 33865712179.5
[2025-02-26 11:42:54] 2025-02-26 10:42:42,008 | INFO     | sum of deviations: -15504562027.999994
[2025-02-26 11:42:54] 2025-02-26 10:42:42,008 | INFO     | mean x: 1740551993.5
[2025-02-26 11:42:54] 2025-02-26 10:42:42,008 | INFO     | mean y: 2389654.112970711
[2025-02-26 11:42:54] 2025-02-26 10:42:42,008 | INFO     | -- intersect: 799257477.3302124
[2025-02-26 11:42:54] 2025-02-26 10:42:42,008 | INFO     | intersect: 799257477.3302124
[2025-02-26 11:42:54] 2025-02-26 10:42:42,009 | INFO     | chi2: 2.011021353919494
[2025-02-26 11:42:54] 2025-02-26 10:42:42,009 | INFO     | current chi2=2.011021353919494 (change=49.97781965600475 %)
[2025-02-26 11:42:54] 2025-02-26 10:42:42,009 | INFO     | model: linear, x: [1740537750.0, 1740537811.0, 1740537872.0, 1740537933.0, 1740537994.0, 1740538055.0, 1740538116.0, 1740538177.0, 1740538238.0, 1740538299.0, 1740
[2025-02-26 11:42:54] 2025-02-26 10:42:42,010 | INFO     | sum of square deviations: 32814055252.0
[2025-02-26 11:42:54] 2025-02-26 10:42:42,013 | INFO     | sum of deviations: -87066495600.0
[2025-02-26 11:42:54] 2025-02-26 10:42:42,013 | INFO     | mean x: 1740552146.0
[2025-02-26 11:42:54] 2025-02-26 10:42:42,014 | INFO     | mean y: 2400031.0105708246
[2025-02-26 11:42:54] 2025-02-26 10:42:42,014 | INFO     | -- intersect: 4620658109.674683
[2025-02-26 11:42:54] 2025-02-26 10:42:42,014 | INFO     | intersect: 4620658109.674683
[2025-02-26 11:42:54] 2025-02-26 10:42:42,014 | INFO     | chi2: 1.1218511901298927
[2025-02-26 11:42:54] 2025-02-26 10:42:42,014 | INFO     | current chi2=1.1218511901298927 (change=44.21485441000429 %)
[2025-02-26 11:42:54] 2025-02-26 10:42:42,015 | INFO     | model: linear, x: [1740538055.0, 1740538116.0, 1740538177.0, 1740538238.0, 1740538299.0, 1740538360.0, 1740538421.0, 1740538482.0, 1740538543.0, 1740538604.0, 1740
[2025-02-26 11:42:54] 2025-02-26 10:42:42,015 | INFO     | sum of square deviations: 31784398737.0
[2025-02-26 11:42:54] 2025-02-26 10:42:42,018 | INFO     | sum of deviations: -87665137918.49998
[2025-02-26 11:42:54] 2025-02-26 10:42:42,018 | INFO     | mean x: 1740552298.5
[2025-02-26 11:42:54] 2025-02-26 10:42:42,018 | INFO     | mean y: 2400108.997863248
[2025-02-26 11:42:54] 2025-02-26 10:42:42,019 | INFO     | -- intersect: 4803049590.050988
[2025-02-26 11:42:54] 2025-02-26 10:42:42,019 | INFO     | intersect: 4803049590.050988
[2025-02-26 11:42:54] 2025-02-26 10:42:42,019 | INFO     | chi2: 1.0945265085778781
[2025-02-26 11:42:54] 2025-02-26 10:42:42,019 | INFO     | current chi2=1.0945265085778781 (change=2.4356779038448706 %)
[2025-02-26 11:42:54] 2025-02-26 10:42:42,019 | INFO     | left removable region: 30
[2025-02-26 11:42:54] 2025-02-26 10:42:42,020 | INFO     | model: linear, x: [1740538970.0, 1740539031.0, 1740539092.0, 1740539153.0, 1740539214.0, 1740539275.0, 1740539336.0, 1740539397.0, 1740539458.0, 1740539519.0, 1740
[2025-02-26 11:42:54] 2025-02-26 10:42:42,020 | INFO     | sum of square deviations: 27694837408.0
[2025-02-26 11:42:54] 2025-02-26 10:42:42,023 | INFO     | sum of deviations: 7426560839.000001
[2025-02-26 11:42:54] 2025-02-26 10:42:42,023 | INFO     | mean x: 1740552573.0
[2025-02-26 11:42:54] 2025-02-26 10:42:42,023 | INFO     | mean y: 2393768.0738255032
[2025-02-26 11:42:54] 2025-02-26 10:42:42,024 | INFO     | -- intersect: -464347357.2280534
[2025-02-26 11:42:54] 2025-02-26 10:42:42,024 | INFO     | intersect: -464347357.2280534
[2025-02-26 11:42:54] 2025-02-26 10:42:42,024 | INFO     | chi2: 0.18035646270723968
[2025-02-26 11:42:54] 2025-02-26 10:42:42,024 | INFO     | -- intersect: -464347357.2280534
[2025-02-26 11:42:54] 2025-02-26 10:42:42,024 | INFO     | current memory leak: 0.27 B/s (using 447 data points, chi2=0.18)
[2025-02-26 11:42:54] 2025-02-26 10:42:42,025 | INFO     | ..............................
[2025-02-26 11:42:54] 2025-02-26 10:42:42,025 | INFO     | . Timing measurements:
[2025-02-26 11:42:54] 2025-02-26 10:42:42,025 | INFO     | . get job = 0 s
[2025-02-26 11:42:54] 2025-02-26 10:42:42,025 | INFO     | . initial setup = 1 s
[2025-02-26 11:42:54] 2025-02-26 10:42:42,025 | INFO     | . payload setup = 5 s
[2025-02-26 11:42:54] 2025-02-26 10:42:42,025 | INFO     | . stage-in = 0 s
[2025-02-26 11:42:54] 2025-02-26 10:42:42,025 | INFO     | . payload execution = 29416 s
[2025-02-26 11:42:54] 2025-02-26 10:42:42,025 | INFO     | . stage-out = 1 s
[2025-02-26 11:42:54] 2025-02-26 10:42:42,026 | INFO     | . log creation = 0 s
[2025-02-26 11:42:54] 2025-02-26 10:42:42,026 | INFO     | ..............................
[2025-02-26 11:42:54] 2025-02-26 10:42:42,139 | INFO     | 
[2025-02-26 11:42:54] 2025-02-26 10:42:42,139 | INFO     | job summary report
[2025-02-26 11:42:54] 2025-02-26 10:42:42,139 | INFO     | --------------------------------------------------
[2025-02-26 11:42:54] 2025-02-26 10:42:42,140 | INFO     | PanDA job id: 6522519505
[2025-02-26 11:42:54] 2025-02-26 10:42:42,140 | INFO     | task id: 43078919
[2025-02-26 11:42:54] 2025-02-26 10:42:42,140 | INFO     | errors: (none)
[2025-02-26 11:42:54] 2025-02-26 10:42:42,140 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 11:42:54] 2025-02-26 10:42:42,140 | INFO     | pilot state: finished 
[2025-02-26 11:42:54] 2025-02-26 10:42:42,140 | INFO     | transexitcode: 0
[2025-02-26 11:42:54] 2025-02-26 10:42:42,140 | INFO     | exeerrorcode: 0
[2025-02-26 11:42:54] 2025-02-26 10:42:42,141 | INFO     | exeerrordiag: 
[2025-02-26 11:42:54] 2025-02-26 10:42:42,141 | INFO     | exitcode: 0
[2025-02-26 11:42:54] 2025-02-26 10:42:42,141 | INFO     | exitmsg: OK
[2025-02-26 11:42:54] 2025-02-26 10:42:42,141 | INFO     | cpuconsumptiontime: 112871 s
[2025-02-26 11:42:54] 2025-02-26 10:42:42,141 | INFO     | nevents: 400
[2025-02-26 11:42:54] 2025-02-26 10:42:42,141 | INFO     | neventsw: 0
[2025-02-26 11:42:54] 2025-02-26 10:42:42,141 | INFO     | pid: 779128
[2025-02-26 11:42:54] 2025-02-26 10:42:42,142 | INFO     | pgrp: 779128
[2025-02-26 11:42:54] 2025-02-26 10:42:42,142 | INFO     | corecount: 4
[2025-02-26 11:42:54] 2025-02-26 10:42:42,142 | INFO     | event service: False
[2025-02-26 11:42:54] 2025-02-26 10:42:42,142 | INFO     | sizes: {0: 2370178, 1: 2370377, 4: 2370583, 11: 2370611, 29425: 2407911, 29427: 2417801, 29428: 2417985, 29432: 2418155}
[2025-02-26 11:42:54] 2025-02-26 10:42:42,142 | INFO     | --------------------------------------------------
[2025-02-26 11:42:54] 2025-02-26 10:42:42,142 | INFO     | 
[2025-02-26 11:42:54] 2025-02-26 10:42:42,142 | INFO     | executing command: ls -lF /scratch/boinc/var/slot16/slots/0
[2025-02-26 11:42:54] 2025-02-26 10:42:42,162 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 11:42:54] 2025-02-26 10:42:42,162 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 11:42:54] 2025-02-26 10:42:42,162 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 11:42:54] 2025-02-26 10:42:42,162 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 11:42:54] 2025-02-26 10:42:42,163 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 11:42:54] 2025-02-26 10:42:42,163 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 11:42:54] 2025-02-26 10:42:42,163 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 11:42:54] 2025-02-26 10:42:42,163 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 11:42:54] 2025-02-26 10:42:42,163 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 11:42:54] 2025-02-26 10:42:42,163 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 11:42:54] 2025-02-26 10:42:42,163 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 11:42:54] 2025-02-26 10:42:42,164 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 11:42:54] 2025-02-26 10:42:42,164 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 11:42:54] 2025-02-26 10:42:42,164 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 11:42:54] 2025-02-26 10:42:42,164 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 11:42:54] 2025-02-26 10:42:42,164 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 11:42:54] 2025-02-26 10:42:42,164 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 11:42:54] 2025-02-26 10:42:42,164 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 11:42:54] 2025-02-26 10:42:42,164 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 11:42:54] 2025-02-26 10:42:42,165 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 11:42:54] 2025-02-26 10:42:42,165 | INFO     | job 6522519505 has completed (purged errors)
[2025-02-26 11:42:54] 2025-02-26 10:42:42,165 | INFO     | overall cleanup function is called
[2025-02-26 11:42:54] 2025-02-26 10:42:43,173 | INFO     | --- collectZombieJob: --- 10, [779128]
[2025-02-26 11:42:54] 2025-02-26 10:42:43,173 | INFO     | zombie collector waiting for pid 779128
[2025-02-26 11:42:54] 2025-02-26 10:42:43,174 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 11:42:54] 2025-02-26 10:42:43,174 | INFO     | collected zombie processes
[2025-02-26 11:42:54] 2025-02-26 10:42:43,174 | INFO     | will attempt to kill all subprocesses of pid=779128
[2025-02-26 11:42:54] 2025-02-26 10:42:43,284 | INFO     | process IDs to be killed: [779128] (in reverse order)
[2025-02-26 11:42:54] 2025-02-26 10:42:43,370 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 11:42:54] 2025-02-26 10:42:43,371 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 11:42:54] 2025-02-26 10:42:43,379 | INFO     | did not find any defunct processes belonging to 779128
[2025-02-26 11:42:54] 2025-02-26 10:42:43,385 | INFO     | did not find any defunct processes belonging to 779128
[2025-02-26 11:42:54] 2025-02-26 10:42:43,385 | INFO     | ready for new job
[2025-02-26 11:42:54] 2025-02-26 10:42:43,386 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 11:42:54] 2025-02-26 10:42:43,388 | INFO     | **************************************
[2025-02-26 11:42:54] 2025-02-26 10:42:43,388 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 11:42:54] 2025-02-26 10:42:43,388 | INFO     | **************************************
[2025-02-26 11:42:54] 2025-02-26 10:42:43,389 | INFO     | 
[2025-02-26 11:42:54] 2025-02-26 10:42:43,391 | INFO     | architecture information:
[2025-02-26 11:42:54] 2025-02-26 10:42:43,392 | INFO     | executing command: cat /etc/os-release
[2025-02-26 11:42:54] 2025-02-26 10:42:43,404 | INFO     | cat /etc/os-release:
[2025-02-26 11:42:54] NAME="CentOS Linux"
[2025-02-26 11:42:54] VERSION="7 (Core)"
[2025-02-26 11:42:54] ID="centos"
[2025-02-26 11:42:54] ID_LIKE="rhel fedora"
[2025-02-26 11:42:54] VERSION_ID="7"
[2025-02-26 11:42:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 11:42:54] ANSI_COLOR="0;31"
[2025-02-26 11:42:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 11:42:54] HOME_URL="https://www.centos.org/"
[2025-02-26 11:42:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 11:42:54] 
[2025-02-26 11:42:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 11:42:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 11:42:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 11:42:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 11:42:54] 
[2025-02-26 11:42:54] 2025-02-26 10:42:43,405 | INFO     | **************************************
[2025-02-26 11:42:54] 2025-02-26 10:42:43,908 | INFO     | executing command: df -mP /scratch/boinc/var/slot16/slots/0
[2025-02-26 11:42:54] 2025-02-26 10:42:43,921 | INFO     | sufficient remaining disk space (1665508835328 B)
[2025-02-26 11:42:54] 2025-02-26 10:42:43,922 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 11:42:54] 2025-02-26 10:42:43,922 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 11:42:54] 2025-02-26 10:42:43,922 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 11:42:54] 2025-02-26 10:42:43,939 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-26 11:42:54] 2025-02-26 10:42:43,939 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-26 11:42:54] 2025-02-26 10:42:43,940 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 11:42:54] 2025-02-26 10:42:43,940 | INFO     | will abort loop
[2025-02-26 11:42:54] 2025-02-26 10:42:43,947 | INFO     | all data control threads have been joined
[2025-02-26 11:42:54] 2025-02-26 10:42:44,322 | INFO     | all payload control threads have been joined
[2025-02-26 11:42:54] 2025-02-26 10:42:44,419 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 11:42:54] 2025-02-26 10:42:44,442 | INFO     | PID=772287 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-26 11:42:54] 2025-02-26 10:42:44,442 | INFO     | .. there are 9 such processes running
[2025-02-26 11:42:54] 2025-02-26 10:42:44,443 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 11:42:54] 2025-02-26 10:42:44,443 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 11:42:54] 2025-02-26 10:42:44,443 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 11:42:54] 2025-02-26 10:42:44,817 | INFO     | all job control threads have been joined
[2025-02-26 11:42:54] 2025-02-26 10:42:44,927 | INFO     | [job] retrieve thread has finished
[2025-02-26 11:42:54] 2025-02-26 10:42:44,928 | INFO     | [job] queue monitor thread has finished
[2025-02-26 11:42:54] 2025-02-26 10:42:44,944 | INFO     | [job] job monitor thread has finished
[2025-02-26 11:42:54] 2025-02-26 10:42:44,952 | INFO     | [data] control thread has finished
[2025-02-26 11:42:54] 2025-02-26 10:42:44,989 | INFO     | [payload] failed_post thread has finished
[2025-02-26 11:42:54] 2025-02-26 10:42:45,126 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 11:42:54] 2025-02-26 10:42:45,329 | INFO     | [payload] control thread has finished
[2025-02-26 11:42:54] 2025-02-26 10:42:45,335 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 11:42:54] 2025-02-26 10:42:45,416 | INFO     | [job] validate thread has finished
[2025-02-26 11:42:54] 2025-02-26 10:42:45,425 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 11:42:54] 2025-02-26 10:42:45,531 | INFO     | [data] copytool_in thread has finished
[2025-02-26 11:42:54] 2025-02-26 10:42:45,638 | INFO     | [payload] validate_post thread has finished
[2025-02-26 11:42:54] 2025-02-26 10:42:45,782 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 11:42:54] 2025-02-26 10:42:45,822 | INFO     | [job] control thread has finished
[2025-02-26 11:42:54] 2025-02-26 10:42:46,336 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 11:42:54] 2025-02-26 10:42:47,131 | INFO     | [data] copytool_out thread has finished
[2025-02-26 11:42:54] 2025-02-26 10:42:48,425 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 11:42:54] 2025-02-26 10:42:49,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22826876176192)>', '<ExcThread(monitor, started 22826639648512)>']
[2025-02-26 11:42:54] 2025-02-26 10:42:49,468 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 11:42:54] 2025-02-26 10:42:49,468 | INFO     | [monitor] control thread has ended
[2025-02-26 11:42:54] 2025-02-26 10:42:54,433 | INFO     | all workflow threads have been joined
[2025-02-26 11:42:54] 2025-02-26 10:42:54,433 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 11:42:54] 2025-02-26 10:42:54,434 | INFO     | traces error code: 0
[2025-02-26 11:42:54] 2025-02-26 10:42:54,434 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 11:42:54] 2025-02-26 10:42:54,570 [wrapper] ==== pilot stdout END ====
[2025-02-26 11:42:54] 2025-02-26 10:42:54,574 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 11:42:54] 2025-02-26 10:42:54,576 [wrapper] pilotpid: 772287
[2025-02-26 11:42:54] 2025-02-26 10:42:54,578 [wrapper] Pilot exit status: 0
[2025-02-26 11:42:54] 2025-02-26 10:42:54,588 [wrapper] pandaids: 6522519505
[2025-02-26 11:42:54] 2025-02-26 10:42:54,635 [wrapper] cleanup supervisor_pilot 1423112 772288
[2025-02-26 11:42:54] 2025-02-26 10:42:54,638 [wrapper] Test setup, not cleaning
[2025-02-26 11:42:54] 2025-02-26 10:42:54,643 [wrapper] apfmon messages muted
[2025-02-26 11:42:54] 2025-02-26 10:42:54,646 [wrapper] ==== wrapper stdout END ====
[2025-02-26 11:42:54] 2025-02-26 10:42:54,648 [wrapper] ==== wrapper stderr END ====
[2025-02-26 11:42:54]  *** Error codes and diagnostics ***
[2025-02-26 11:42:54]     "exeErrorCode": 0,
[2025-02-26 11:42:54]     "exeErrorDiag": "",
[2025-02-26 11:42:54]     "pilotErrorCode": 0,
[2025-02-26 11:42:54]     "pilotErrorDiag": "",
[2025-02-26 11:42:54]  *** Listing of results directory ***
[2025-02-26 11:42:54] total 676264
[2025-02-26 11:42:54] -rw-r--r-- 1 boinc boinc      5118 Feb 21 23:25 queuedata.json
[2025-02-26 11:42:54] -rw-r--r-- 1 boinc boinc    491065 Feb 21 23:25 pilot3.tar.gz
[2025-02-26 11:42:54] -rwx------ 1 boinc boinc     35865 Feb 21 23:27 runpilot2-wrapper.sh
[2025-02-26 11:42:54] -rw-r--r-- 1 boinc boinc       100 Feb 26 02:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 11:42:54] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 02:49 run_atlas
[2025-02-26 11:42:54] -rw-r--r-- 1 boinc boinc       105 Feb 26 02:49 job.xml
[2025-02-26 11:42:54] -rw-r--r-- 2 boinc boinc 347955296 Feb 26 03:31 EVNT.43078917._002518.pool.root.1
[2025-02-26 11:42:54] -rw-r--r-- 1 boinc boinc      6422 Feb 26 03:31 init_data.xml
[2025-02-26 11:42:54] -rw-r--r-- 2 boinc boinc    503556 Feb 26 03:31 input.tar.gz
[2025-02-26 11:42:54] drwxrwx--x 2 boinc boinc      4096 Feb 26 03:31 shared
[2025-02-26 11:42:54] -rw-r--r-- 2 boinc boinc     17569 Feb 26 03:31 start_atlas.sh
[2025-02-26 11:42:54] -rw-r--r-- 1 boinc boinc         0 Feb 26 03:31 boinc_lockfile
[2025-02-26 11:42:54] -rw-r--r-- 1 boinc boinc      2546 Feb 26 03:31 pandaJob.out
[2025-02-26 11:42:54] -rw------- 1 boinc boinc       424 Feb 26 03:31 setup.sh.local
[2025-02-26 11:42:54] -rw------- 1 boinc boinc    987482 Feb 26 03:31 agis_schedconf.cvmfs.json
[2025-02-26 11:42:54] drwx------ 4 boinc boinc      4096 Feb 26 03:31 pilot3
[2025-02-26 11:42:54] -rw------- 1 boinc boinc 332954343 Feb 26 11:41 HITS.43078919._085504.pool.root.1
[2025-02-26 11:42:54] -rw-r--r-- 1 boinc boinc       532 Feb 26 11:41 boinc_task_state.xml
[2025-02-26 11:42:54] -rw------- 1 boinc boinc        95 Feb 26 11:42 pilot_heartbeat.json
[2025-02-26 11:42:54] -rw-r--r-- 1 boinc boinc      8192 Feb 26 11:42 boinc_mmap_file
[2025-02-26 11:42:54] -rw-r--r-- 1 boinc boinc        29 Feb 26 11:42 wrapper_checkpoint.txt
[2025-02-26 11:42:54] -rw------- 1 boinc boinc      1038 Feb 26 11:42 memory_monitor_summary.json
[2025-02-26 11:42:54] -rw------- 1 boinc boinc   1569202 Feb 26 11:42 agis_ddmendpoints.agis.ALL.json
[2025-02-26 11:42:54] -rw------- 1 boinc boinc    539181 Feb 26 11:42 log.43078919._085504.job.log.tgz.1
[2025-02-26 11:42:54] -rw------- 1 boinc boinc      7751 Feb 26 11:42 heartbeat.json
[2025-02-26 11:42:54] -rw------- 1 boinc boinc      4806 Feb 26 11:42 pilotlog.txt
[2025-02-26 11:42:54] -rw------- 1 boinc boinc   3357067 Feb 26 11:42 log.43078919._085504.job.log.1
[2025-02-26 11:42:54] -rw------- 1 boinc boinc       357 Feb 26 11:42 output.list
[2025-02-26 11:42:54] -rw-r--r-- 1 boinc boinc       620 Feb 26 11:42 runtime_log
[2025-02-26 11:42:54] -rw------- 1 boinc boinc   3911680 Feb 26 11:42 result.tar.gz
[2025-02-26 11:42:54] -rw------- 1 boinc boinc       667 Feb 26 11:42 udJKDmZfq56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmb4sKDmNd74wn.diag
[2025-02-26 11:42:54] -rw-r--r-- 1 boinc boinc     11424 Feb 26 11:42 runtime_log.err
[2025-02-26 11:42:54] -rw-r--r-- 1 boinc boinc     21435 Feb 26 11:42 stderr.txt
[2025-02-26 11:42:54] HITS file was successfully produced:
[2025-02-26 11:42:54] -rw------- 1 boinc boinc 332954343 Feb 26 11:41 shared/HITS.pool.root.1
[2025-02-26 11:42:54]  *** Contents of shared directory: ***
[2025-02-26 11:42:54] total 669296
[2025-02-26 11:42:54] -rw-r--r-- 2 boinc boinc 347955296 Feb 26 03:31 ATLAS.root_0
[2025-02-26 11:42:54] -rw-r--r-- 2 boinc boinc    503556 Feb 26 03:31 input.tar.gz
[2025-02-26 11:42:54] -rw-r--r-- 2 boinc boinc     17569 Feb 26 03:31 start_atlas.sh
[2025-02-26 11:42:54] -rw------- 1 boinc boinc 332954343 Feb 26 11:41 HITS.pool.root.1
[2025-02-26 11:42:54] -rw------- 1 boinc boinc   3911680 Feb 26 11:42 result.tar.gz
11:42:55 (768632): run_atlas exited; CPU time 112980.367857
11:42:55 (768632): called boinc_finish(0)

</stderr_txt>
]]>

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