Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:31:29 (13425): wrapper (7.7.26015): starting
23:31:29 (13425): wrapper: running run_atlas (--nthreads 12)
[2025-02-22 23:31:29] Arguments: --nthreads 12
[2025-02-22 23:31:29] Threads: 12
[2025-02-22 23:31:29] Checking for CVMFS
[2025-02-22 23:31:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-22 23:31:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-22 23:31:30] Running cvmfs_config stat atlas.cern.ch
[2025-02-22 23:31:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-22 23:31:31] 2.11.2.0 13457 779 75128 142954 1 185 22944000 25165824 0 130560 0 8052524 99.986 344145 7432 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-02-22 23:31:31] CVMFS is ok
[2025-02-22 23:31:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 23:31:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 23:31:31] Further information can be found at the LHC@home message board.
[2025-02-22 23:31:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 23:31:31] Checking for apptainer binary...
[2025-02-22 23:31:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-22 23:31:31] Running /usr/bin/apptainer --version
[2025-02-22 23:31:31] apptainer version 1.3.2-1.el7
[2025-02-22 23:31:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 23:31:35] cg-vwn116.simple-grid.lan
[2025-02-22 23:31:35] apptainer works
[2025-02-22 23:31:35] Set ATHENA_PROC_NUMBER=12
[2025-02-22 23:31:35] Set ATHENA_CORE_NUMBER=12
[2025-02-22 23:31:35] Starting ATLAS job with PandaID=6522880603
[2025-02-22 23:31:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 23:38:13]  *** The last 200 lines of the pilot log: ***
[2025-02-22 23:38:13] 2025-02-22 22:37:21,442 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#6/#20)
[2025-02-22 23:38:13] 2025-02-22 22:37:22,364 | INFO     | PID=17131 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-22 23:38:13] 2025-02-22 22:37:22,569 | INFO     | CPU arch script returned: x86-64-v1
[2025-02-22 23:38:13] 2025-02-22 22:37:22,570 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6522880603/memory_monitor_output.txt
[2025-02-22 23:38:13] 2025-02-22 22:37:22,571 | INFO     | memory summary dictionary not yet available
[2025-02-22 23:38:13] 2025-02-22 22:37:22,573 | INFO     | ..............................
[2025-02-22 23:38:13] 2025-02-22 22:37:22,573 | INFO     | . Timing measurements:
[2025-02-22 23:38:13] 2025-02-22 22:37:22,574 | INFO     | . get job = 0 s
[2025-02-22 23:38:13] 2025-02-22 22:37:22,574 | INFO     | . initial setup = 2 s
[2025-02-22 23:38:13] 2025-02-22 22:37:22,574 | INFO     | . payload setup = 26 s
[2025-02-22 23:38:13] 2025-02-22 22:37:22,575 | INFO     | . stage-in = 0 s
[2025-02-22 23:38:13] 2025-02-22 22:37:22,575 | INFO     | . payload execution = 227 s
[2025-02-22 23:38:13] 2025-02-22 22:37:22,575 | INFO     | . stage-out = 0 s
[2025-02-22 23:38:13] 2025-02-22 22:37:22,576 | INFO     | . log creation = 0 s
[2025-02-22 23:38:13] 2025-02-22 22:37:22,576 | INFO     | ..............................
[2025-02-22 23:38:13] 2025-02-22 22:37:22,615 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-02-22 23:38:13] 2025-02-22 22:37:22,616 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6522880603/pilotlog.txt
[2025-02-22 23:38:13] 2025-02-22 22:37:22,675 | WARNING  | 
[2025-02-22 23:38:13] [begin log extracts]
[2025-02-22 23:38:13] - Log from pilotlog.txt -
[2025-02-22 23:38:13] 2025-02-22 22:37:18,778 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-02-22 23:38:13] 2025-02-22 22:37:21,282 | INFO     | monitor loop #73: job 0:6522880603 is in state 'failed'
[2025-02-22 23:38:13] 2025-02-22 22:37:21,283 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-02-22 23:38:13] 2025-02-22 22:37:21,442 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#6/#20)
[2025-02-22 23:38:13] 2025-02-22 22:37:22,364 | INFO     | PID=17131 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-22 23:38:13] 2025-02-22 22:37:22,569 | INFO     | CPU arch script returned: x86-64-v1
[2025-02-22 23:38:13] 2025-02-22 22:37:22,570 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6522880603/memory_monitor_output.txt
[2025-02-22 23:38:13] 2025-02-22 22:37:22,571 | INFO     | memory summary dictionary not yet available
[2025-02-22 23:38:13] 2025-02-22 22:37:22,573 | INFO     | ..............................
[2025-02-22 23:38:13] 2025-02-22 22:37:22,573 | INFO     | . Timing measurements:
[2025-02-22 23:38:13] 2025-02-22 22:37:22,574 | INFO     | . get job = 0 s
[2025-02-22 23:38:13] 2025-02-22 22:37:22,574 | INFO     | . initial setup = 2 s
[2025-02-22 23:38:13] 2025-02-22 22:37:22,574 | INFO     | . payload setup = 26 s
[2025-02-22 23:38:13] 2025-02-22 22:37:22,575 | INFO     | . stage-in = 0 s
[2025-02-22 23:38:13] 2025-02-22 22:37:22,575 | INFO     | . payload execution = 227 s
[2025-02-22 23:38:13] 2025-02-22 22:37:22,575 | INFO     | . stage-out = 0 s
[2025-02-22 23:38:13] 2025-02-22 22:37:22,576 | INFO     | . log creation = 0 s
[2025-02-22 23:38:13] 2025-02-22 22:37:22,576 | INFO     | ..............................
[2025-02-22 23:38:13] 2025-02-22 22:37:22,615 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-02-22 23:38:13] 2025-02-22 22:37:22,616 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6522880603/pilotlog.txt
[2025-02-22 23:38:13] [end log extracts]
[2025-02-22 23:38:13] 2025-02-22 22:37:22,850 | INFO     | 
[2025-02-22 23:38:13] 2025-02-22 22:37:22,851 | INFO     | job summary report
[2025-02-22 23:38:13] 2025-02-22 22:37:22,851 | INFO     | --------------------------------------------------
[2025-02-22 23:38:13] 2025-02-22 22:37:22,852 | INFO     | PanDA job id: 6522880603
[2025-02-22 23:38:13] 2025-02-22 22:37:22,852 | INFO     | task id: 43078919
[2025-02-22 23:38:13] 2025-02-22 22:37:22,852 | INFO     | errors: (none)
[2025-02-22 23:38:13] 2025-02-22 22:37:22,853 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 23:38:13] 2025-02-22 22:37:22,853 | INFO     | pilot state: failed 
[2025-02-22 23:38:13] 2025-02-22 22:37:22,854 | INFO     | transexitcode: 0
[2025-02-22 23:38:13] 2025-02-22 22:37:22,854 | INFO     | exeerrorcode: 0
[2025-02-22 23:38:13] 2025-02-22 22:37:22,855 | INFO     | exeerrordiag: 
[2025-02-22 23:38:13] 2025-02-22 22:37:22,855 | INFO     | exitcode: 0
[2025-02-22 23:38:13] 2025-02-22 22:37:22,855 | INFO     | exitmsg: 
[2025-02-22 23:38:13] 2025-02-22 22:37:22,856 | INFO     | cpuconsumptiontime: 158 s
[2025-02-22 23:38:13] 2025-02-22 22:37:22,856 | INFO     | nevents: 0
[2025-02-22 23:38:13] 2025-02-22 22:37:22,856 | INFO     | neventsw: 0
[2025-02-22 23:38:13] 2025-02-22 22:37:22,857 | INFO     | pid: 23591
[2025-02-22 23:38:13] 2025-02-22 22:37:22,857 | INFO     | pgrp: 23591
[2025-02-22 23:38:13] 2025-02-22 22:37:22,857 | INFO     | corecount: 12
[2025-02-22 23:38:13] 2025-02-22 22:37:22,858 | INFO     | event service: False
[2025-02-22 23:38:13] 2025-02-22 22:37:22,858 | INFO     | sizes: {0: 2382533, 1: 2383218, 2: 2383417, 13: 2383417, 18: 2383679, 23: 2383707, 254: 2387739, 256: 2392033, 273: 2391977}
[2025-02-22 23:38:13] 2025-02-22 22:37:22,859 | INFO     | --------------------------------------------------
[2025-02-22 23:38:13] 2025-02-22 22:37:22,859 | INFO     | 
[2025-02-22 23:38:13] 2025-02-22 22:37:22,860 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-02-22 23:38:13] 2025-02-22 22:37:22,953 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 23:38:13] 2025-02-22 22:37:22,954 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 23:38:13] 2025-02-22 22:37:22,955 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 23:38:13] 2025-02-22 22:37:22,955 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 23:38:13] 2025-02-22 22:37:22,955 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 23:38:13] 2025-02-22 22:37:22,956 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 23:38:13] 2025-02-22 22:37:22,956 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 23:38:13] 2025-02-22 22:37:22,957 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 23:38:13] 2025-02-22 22:37:22,957 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 23:38:13] 2025-02-22 22:37:22,957 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 23:38:13] 2025-02-22 22:37:22,958 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 23:38:13] 2025-02-22 22:37:22,958 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 23:38:13] 2025-02-22 22:37:22,959 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 23:38:13] 2025-02-22 22:37:22,959 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 23:38:13] 2025-02-22 22:37:22,959 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 23:38:13] 2025-02-22 22:37:22,960 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 23:38:13] 2025-02-22 22:37:22,960 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 23:38:13] 2025-02-22 22:37:22,961 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 23:38:13] 2025-02-22 22:37:22,961 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 23:38:13] 2025-02-22 22:37:22,961 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 23:38:13] 2025-02-22 22:37:22,962 | INFO     | job 6522880603 has completed (purged errors)
[2025-02-22 23:38:13] 2025-02-22 22:37:22,962 | INFO     | overall cleanup function is called
[2025-02-22 23:38:13] 2025-02-22 22:37:23,972 | INFO     | --- collectZombieJob: --- 10, [23591]
[2025-02-22 23:38:13] 2025-02-22 22:37:23,973 | INFO     | zombie collector waiting for pid 23591
[2025-02-22 23:38:13] 2025-02-22 22:37:23,974 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 23:38:13] 2025-02-22 22:37:23,974 | INFO     | collected zombie processes
[2025-02-22 23:38:13] 2025-02-22 22:37:23,974 | INFO     | will attempt to kill all subprocesses of pid=23591
[2025-02-22 23:38:13] 2025-02-22 22:37:24,137 | INFO     | process IDs to be killed: [23591] (in reverse order)
[2025-02-22 23:38:13] 2025-02-22 22:37:24,279 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 23:38:13] 2025-02-22 22:37:24,280 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 23:38:13] 2025-02-22 22:37:24,287 | INFO     | did not find any defunct processes belonging to 23591
[2025-02-22 23:38:13] 2025-02-22 22:37:24,293 | INFO     | did not find any defunct processes belonging to 23591
[2025-02-22 23:38:13] 2025-02-22 22:37:24,294 | INFO     | ready for new job
[2025-02-22 23:38:13] 2025-02-22 22:37:24,295 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 23:38:13] 2025-02-22 22:37:24,299 | INFO     | **************************************
[2025-02-22 23:38:13] 2025-02-22 22:37:24,299 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 23:38:13] 2025-02-22 22:37:24,300 | INFO     | **************************************
[2025-02-22 23:38:13] 2025-02-22 22:37:24,300 | INFO     | 
[2025-02-22 23:38:13] 2025-02-22 22:37:24,302 | INFO     | pilot is running in a VM
[2025-02-22 23:38:13] 2025-02-22 22:37:24,302 | INFO     | architecture information:
[2025-02-22 23:38:13] 2025-02-22 22:37:24,304 | INFO     | executing command: cat /etc/os-release
[2025-02-22 23:38:13] 2025-02-22 22:37:24,364 | INFO     | cat /etc/os-release:
[2025-02-22 23:38:13] NAME="CentOS Linux"
[2025-02-22 23:38:13] VERSION="7 (Core)"
[2025-02-22 23:38:13] ID="centos"
[2025-02-22 23:38:13] ID_LIKE="rhel fedora"
[2025-02-22 23:38:13] VERSION_ID="7"
[2025-02-22 23:38:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 23:38:13] ANSI_COLOR="0;31"
[2025-02-22 23:38:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 23:38:13] HOME_URL="https://www.centos.org/"
[2025-02-22 23:38:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 23:38:13] 
[2025-02-22 23:38:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 23:38:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 23:38:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 23:38:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 23:38:13] 
[2025-02-22 23:38:13] 2025-02-22 22:37:24,365 | INFO     | **************************************
[2025-02-22 23:38:13] 2025-02-22 22:37:24,459 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#7/#20)
[2025-02-22 23:38:13] 2025-02-22 22:37:24,869 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-02-22 23:38:13] 2025-02-22 22:37:24,935 | INFO     | sufficient remaining disk space (256393609216 B)
[2025-02-22 23:38:13] 2025-02-22 22:37:24,936 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 23:38:13] 2025-02-22 22:37:24,937 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 23:38:13] 2025-02-22 22:37:24,938 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-22 23:38:13] 2025-02-22 22:37:24,939 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 23:38:13] 2025-02-22 22:37:24,940 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 23:38:13] 2025-02-22 22:37:24,940 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 23:38:13] 2025-02-22 22:37:24,941 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 23:38:13] 2025-02-22 22:37:24,941 | INFO     | aborting loop
[2025-02-22 23:38:13] 2025-02-22 22:37:25,063 | INFO     | all data control threads have been joined
[2025-02-22 23:38:13] 2025-02-22 22:37:25,660 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 23:38:13] 2025-02-22 22:37:25,670 | INFO     | all job control threads have been joined
[2025-02-22 23:38:13] 2025-02-22 22:37:25,943 | INFO     | [job] retrieve thread has finished
[2025-02-22 23:38:13] 2025-02-22 22:37:25,948 | INFO     | [job] job monitor thread has finished
[2025-02-22 23:38:13] 2025-02-22 22:37:26,008 | INFO     | [payload] failed_post thread has finished
[2025-02-22 23:38:13] 2025-02-22 22:37:26,026 | INFO     | [payload] validate_post thread has finished
[2025-02-22 23:38:13] 2025-02-22 22:37:26,069 | INFO     | [data] control thread has finished
[2025-02-22 23:38:13] 2025-02-22 22:37:26,250 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 23:38:13] 2025-02-22 22:37:26,273 | INFO     | all payload control threads have been joined
[2025-02-22 23:38:13] 2025-02-22 22:37:26,437 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 23:38:13] 2025-02-22 22:37:26,647 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 23:38:13] 2025-02-22 22:37:26,676 | INFO     | [job] control thread has finished
[2025-02-22 23:38:13] 2025-02-22 22:37:26,957 | INFO     | [job] validate thread has finished
[2025-02-22 23:38:13] 2025-02-22 22:37:27,153 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 23:38:13] 2025-02-22 22:37:27,279 | INFO     | [payload] control thread has finished
[2025-02-22 23:38:13] 2025-02-22 22:37:27,376 | INFO     | [data] copytool_in thread has finished
[2025-02-22 23:38:13] 2025-02-22 22:37:27,475 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#8/#20)
[2025-02-22 23:38:13] 2025-02-22 22:37:27,862 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 23:38:13] 2025-02-22 22:37:28,443 | INFO     | [data] copytool_out thread has finished
[2025-02-22 23:38:13] 2025-02-22 22:37:28,868 | INFO     | [job] queue monitor thread has finished
[2025-02-22 23:38:13] 2025-02-22 22:37:29,668 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 23:38:13] 2025-02-22 22:37:30,491 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#9/#20)
[2025-02-22 23:38:13] 2025-02-22 22:37:33,507 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#10/#20)
[2025-02-22 23:38:13] 2025-02-22 22:37:36,523 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#11/#20)
[2025-02-22 23:38:13] 2025-02-22 22:37:39,539 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#12/#20)
[2025-02-22 23:38:13] 2025-02-22 22:37:42,556 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#13/#20)
[2025-02-22 23:38:13] 2025-02-22 22:37:45,572 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#14/#20)
[2025-02-22 23:38:13] 2025-02-22 22:37:48,589 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#15/#20)
[2025-02-22 23:38:13] 2025-02-22 22:37:51,605 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#16/#20)
[2025-02-22 23:38:13] 2025-02-22 22:37:54,621 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#17/#20)
[2025-02-22 23:38:13] 2025-02-22 22:37:57,638 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#18/#20)
[2025-02-22 23:38:13] 2025-02-22 22:38:00,654 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#19/#20)
[2025-02-22 23:38:13] 2025-02-22 22:38:03,670 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#20/#20)
[2025-02-22 23:38:13] 2025-02-22 22:38:06,686 | WARNING  | file copy failure: path does not exist: /var/lib/boinc/slots/1/PanDA_Pilot-6522880603/memory_monitor_summary.json
[2025-02-22 23:38:13] 2025-02-22 22:38:06,688 | WARNING  | failed to copy memory monitor output: error code: 1103, message: No such file or directory
[2025-02-22 23:38:13] details: ('file copy failure: path does not exist: /var/lib/boinc/slots/1/PanDA_Pilot-6522880603/memory_monitor_summary.json',)
[2025-02-22 23:38:13] 2025-02-22 22:38:06,718 | INFO     | found no lingering processes
[2025-02-22 23:38:13] 2025-02-22 22:38:06,718 | INFO     | CPU consumption time: 277.17 s (rounded to 277 s)
[2025-02-22 23:38:13] 2025-02-22 22:38:06,719 | WARNING  | main payload execution returned non-zero exit code: 65
[2025-02-22 23:38:13] 2025-02-22 22:38:06,720 | INFO     | file does not exist: /var/lib/boinc/slots/1/PanDA_Pilot-6522880603/payload.stderr
[2025-02-22 23:38:13] 2025-02-22 22:38:06,721 | WARNING  | found no payload stdout
[2025-02-22 23:38:13] 2025-02-22 22:38:06,722 | WARNING  | job report does not exist: /var/lib/boinc/slots/1/PanDA_Pilot-6522880603/jobReport.json
[2025-02-22 23:38:13] 2025-02-22 22:38:06,723 | WARNING  | metadata does not exist: /var/lib/boinc/slots/1/PanDA_Pilot-6522880603/metadata.xml
[2025-02-22 23:38:13] 2025-02-22 22:38:06,723 | WARNING  | file does not exist: /var/lib/boinc/slots/1/PanDA_Pilot-6522880603/metadata.xml
[2025-02-22 23:38:13] 2025-02-22 22:38:06,724 | INFO     | generated guid for lfn=HITS.43078919._087341.pool.root.1: 766CE431-24D1-4D97-A6FA-81C8C5E6295C
[2025-02-22 23:38:13] 2025-02-22 22:38:06,724 | WARNING  | aborting payload error diagnosis since an error has already been set: [65, 1187]
[2025-02-22 23:38:13] 2025-02-22 22:38:07,879 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 23:38:13] 2025-02-22 22:38:07,998 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140427518166848)>', '<ExcThread(monitor, started 140427093071616)>']
[2025-02-22 23:38:13] 2025-02-22 22:38:08,158 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 23:38:13] 2025-02-22 22:38:08,158 | INFO     | [monitor] control thread has ended
[2025-02-22 23:38:13] 2025-02-22 22:38:13,024 | INFO     | all workflow threads have been joined
[2025-02-22 23:38:13] 2025-02-22 22:38:13,025 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 23:38:13] 2025-02-22 22:38:13,026 | INFO     | traces error code: 0
[2025-02-22 23:38:13] 2025-02-22 22:38:13,027 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 23:38:13] 2025-02-22 22:38:13,307 [wrapper] ==== pilot stdout END ====
[2025-02-22 23:38:13] 2025-02-22 22:38:13,320 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 23:38:13] 2025-02-22 22:38:13,334 [wrapper] pilotpid: 17131
[2025-02-22 23:38:13] 2025-02-22 22:38:13,347 [wrapper] Pilot exit status: 0
[2025-02-22 23:38:13] 2025-02-22 22:38:13,402 [wrapper] pandaids: 6522880603
[2025-02-22 23:38:13] 2025-02-22 22:38:13,527 [wrapper] cleanup supervisor_pilot 17137 17132
[2025-02-22 23:38:13] 2025-02-22 22:38:13,541 [wrapper] Test setup, not cleaning
[2025-02-22 23:38:13] 2025-02-22 22:38:13,566 [wrapper] apfmon messages muted
[2025-02-22 23:38:13] 2025-02-22 22:38:13,579 [wrapper] ==== wrapper stdout END ====
[2025-02-22 23:38:13] 2025-02-22 22:38:13,592 [wrapper] ==== wrapper stderr END ====
[2025-02-22 23:38:13]  *** Error codes and diagnostics ***
[2025-02-22 23:38:13]     "exeErrorCode": 0,
[2025-02-22 23:38:13]     "exeErrorDiag": "",
[2025-02-22 23:38:13]     "pilotErrorCode": 0,
[2025-02-22 23:38:13]     "pilotErrorDiag": "",
[2025-02-22 23:38:13]  *** Listing of results directory ***
[2025-02-22 23:38:13] total 337536
[2025-02-22 23:38:13] -rw-r--r--. 1 boinc boinc    491065 Feb 22 10:59 pilot3.tar.gz
[2025-02-22 23:38:13] -rwx------. 1 boinc boinc     35865 Feb 22 11:13 runpilot2-wrapper.sh
[2025-02-22 23:38:13] -rw-r--r--. 1 boinc boinc      5118 Feb 22 11:13 queuedata.json
[2025-02-22 23:38:13] -rw-r--r--. 1 boinc boinc       100 Feb 22 23:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 23:38:13] -rwxr-xr-x. 1 boinc boinc      7986 Feb 22 23:31 run_atlas
[2025-02-22 23:38:13] -rw-r--r--. 1 boinc boinc       105 Feb 22 23:31 job.xml
[2025-02-22 23:38:13] -rw-r--r--. 2 boinc boinc 341498677 Feb 22 23:31 EVNT.43078917._002488.pool.root.1
[2025-02-22 23:38:13] -rw-r--r--. 1 boinc boinc      6119 Feb 22 23:31 init_data.xml
[2025-02-22 23:38:13] -rw-r--r--. 2 boinc boinc     17569 Feb 22 23:31 start_atlas.sh
[2025-02-22 23:38:13] drwxrwx--x. 2 boinc boinc        68 Feb 22 23:31 shared
[2025-02-22 23:38:13] -rw-r--r--. 2 boinc boinc    503556 Feb 22 23:31 input.tar.gz
[2025-02-22 23:38:13] -rw-r--r--. 1 boinc boinc         0 Feb 22 23:31 boinc_lockfile
[2025-02-22 23:38:13] -rw-r--r--. 1 boinc boinc      2546 Feb 22 23:31 pandaJob.out
[2025-02-22 23:38:13] -rw-------. 1 boinc boinc       424 Feb 22 23:31 setup.sh.local
[2025-02-22 23:38:13] -rw-------. 1 boinc boinc    987744 Feb 22 23:32 agis_schedconf.cvmfs.json
[2025-02-22 23:38:13] -rw-------. 1 boinc boinc   1582569 Feb 22 23:32 agis_ddmendpoints.agis.ALL.json
[2025-02-22 23:38:13] drwx------. 4 boinc boinc      4096 Feb 22 23:32 pilot3
[2025-02-22 23:38:13] -rw-r--r--. 1 boinc boinc       526 Feb 22 23:36 boinc_task_state.xml
[2025-02-22 23:38:13] -rw-------. 1 boinc boinc     46631 Feb 22 23:37 log.43078919._087341.job.log.tgz.1
[2025-02-22 23:38:13] -rw-------. 1 boinc boinc        95 Feb 22 23:37 pilot_heartbeat.json
[2025-02-22 23:38:13] -rw-------. 1 boinc boinc      7823 Feb 22 23:37 heartbeat.json
[2025-02-22 23:38:13] -rw-r--r--. 1 boinc boinc        24 Feb 22 23:37 wrapper_checkpoint.txt
[2025-02-22 23:38:13] -rw-r--r--. 1 boinc boinc      8192 Feb 22 23:37 boinc_mmap_file
[2025-02-22 23:38:13] -rw-------. 1 boinc boinc      7775 Feb 22 23:38 pilotlog.txt
[2025-02-22 23:38:13] -rw-------. 1 boinc boinc    130621 Feb 22 23:38 log.43078919._087341.job.log.1
[2025-02-22 23:38:13] -rw-------. 1 boinc boinc       188 Feb 22 23:38 output.list
[2025-02-22 23:38:13] -rw-r--r--. 1 boinc boinc       620 Feb 22 23:38 runtime_log
[2025-02-22 23:38:13] -rw-------. 1 boinc boinc    194560 Feb 22 23:38 result.tar.gz
[2025-02-22 23:38:13] -rw-------. 1 boinc boinc       640 Feb 22 23:38 WgSKDmIh156nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmFqtKDmGYk0on.diag
[2025-02-22 23:38:13] -rw-r--r--. 1 boinc boinc     10861 Feb 22 23:38 runtime_log.err
[2025-02-22 23:38:13] -rw-r--r--. 1 boinc boinc     22748 Feb 22 23:38 stderr.txt
[2025-02-22 23:38:13] No HITS result produced
[2025-02-22 23:38:13]  *** Contents of shared directory: ***
[2025-02-22 23:38:14] total 334200
[2025-02-22 23:38:14] -rw-r--r--. 2 boinc boinc 341498677 Feb 22 23:31 ATLAS.root_0
[2025-02-22 23:38:14] -rw-r--r--. 2 boinc boinc     17569 Feb 22 23:31 start_atlas.sh
[2025-02-22 23:38:14] -rw-r--r--. 2 boinc boinc    503556 Feb 22 23:31 input.tar.gz
[2025-02-22 23:38:14] -rw-------. 1 boinc boinc    194560 Feb 22 23:38 result.tar.gz
23:38:15 (13425): run_atlas exited; CPU time 194.517591
23:38:15 (13425): called boinc_finish(0)

</stderr_txt>
]]>

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