Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:48:13 (1829858): wrapper (7.7.26015): starting
11:48:13 (1829858): wrapper: running run_atlas (--nthreads 4)
[2025-02-26 11:48:13] Arguments: --nthreads 4
[2025-02-26 11:48:13] Threads: 4
[2025-02-26 11:48:13] Checking for CVMFS
[2025-02-26 11:48:13] No cvmfs_config command found, will try listing directly
[2025-02-26 11:48:13] CVMFS is ok
[2025-02-26 11:48:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-26 11:48:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-26 11:48:13] Further information can be found at the LHC@home message board.
[2025-02-26 11:48:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 11:48:13] Checking for apptainer binary...
[2025-02-26 11:48:13] which: no apptainer in ((null))
[2025-02-26 11:48:13] apptainer is not installed, using version from CVMFS
[2025-02-26 11:48:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 11:48:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-02-26 11:48:13] apptainer works
[2025-02-26 11:48:13] Set ATHENA_PROC_NUMBER=4
[2025-02-26 11:48:13] Set ATHENA_CORE_NUMBER=4
[2025-02-26 11:48:13] Starting ATLAS job with PandaID=6522973810
[2025-02-26 11:48:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 17:40:50]  *** The last 200 lines of the pilot log: ***
[2025-02-26 17:40:50] 2025-02-26 16:40:30,326 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-26 17:40:50] 2025-02-26 16:40:30,326 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-26 17:40:50] 2025-02-26 16:40:30,333 | INFO     | fitting pss+swap vs Time
[2025-02-26 17:40:50] 2025-02-26 16:40:30,333 | INFO     | model: linear, x: [1740566940.0, 1740567001.0, 1740567062.0, 1740567123.0, 1740567184.0, 1740567245.0, 1740567306.0, 1740567367.0, 1740567428.0, 1740567489.0, 1740
[2025-02-26 17:40:50] 2025-02-26 16:40:30,334 | INFO     | sum of square deviations: 12844082682.5
[2025-02-26 17:40:50] 2025-02-26 16:40:30,337 | INFO     | sum of deviations: 156572021419.5
[2025-02-26 17:40:50] 2025-02-26 16:40:30,337 | INFO     | mean x: 1740577462.5
[2025-02-26 17:40:50] 2025-02-26 16:40:30,337 | INFO     | mean y: 2321959.309248555
[2025-02-26 17:40:50] 2025-02-26 16:40:30,337 | INFO     | -- intersect: -21215676902.700874
[2025-02-26 17:40:50] 2025-02-26 16:40:30,337 | INFO     | intersect: -21215676902.700874
[2025-02-26 17:40:50] 2025-02-26 16:40:30,338 | INFO     | chi2: 4.772602560086268
[2025-02-26 17:40:50] 2025-02-26 16:40:30,338 | INFO     | model: linear, x: [1740566940.0, 1740567001.0, 1740567062.0, 1740567123.0, 1740567184.0, 1740567245.0, 1740567306.0, 1740567367.0, 1740567428.0, 1740567489.0, 1740
[2025-02-26 17:40:50] 2025-02-26 16:40:30,338 | INFO     | sum of square deviations: 12295263090.0
[2025-02-26 17:40:50] 2025-02-26 16:40:30,342 | INFO     | sum of deviations: 176227508488.9999
[2025-02-26 17:40:50] 2025-02-26 16:40:30,342 | INFO     | mean x: 1740577310.0
[2025-02-26 17:40:50] 2025-02-26 16:40:30,342 | INFO     | mean y: 2327347.9413489737
[2025-02-26 17:40:50] 2025-02-26 16:40:30,342 | INFO     | -- intersect: -24945296824.75829
[2025-02-26 17:40:50] 2025-02-26 16:40:30,342 | INFO     | intersect: -24945296824.75829
[2025-02-26 17:40:50] 2025-02-26 16:40:30,343 | INFO     | chi2: 3.968649648312246
[2025-02-26 17:40:50] 2025-02-26 16:40:30,343 | INFO     | current chi2=3.968649648312246 (change=16.84516784400941 %)
[2025-02-26 17:40:50] 2025-02-26 16:40:30,343 | INFO     | right removable region: 340
[2025-02-26 17:40:50] 2025-02-26 16:40:30,343 | INFO     | model: linear, x: [1740567245.0, 1740567306.0, 1740567367.0, 1740567428.0, 1740567489.0, 1740567550.0, 1740567611.0, 1740567672.0, 1740567733.0, 1740567794.0, 1740
[2025-02-26 17:40:50] 2025-02-26 16:40:30,346 | INFO     | sum of square deviations: 12295263090.0
[2025-02-26 17:40:50] 2025-02-26 16:40:30,349 | INFO     | sum of deviations: 74762205302.99997
[2025-02-26 17:40:50] 2025-02-26 16:40:30,349 | INFO     | mean x: 1740577615.0
[2025-02-26 17:40:50] 2025-02-26 16:40:30,349 | INFO     | mean y: 2344652.598240469
[2025-02-26 17:40:50] 2025-02-26 16:40:30,349 | INFO     | -- intersect: -10581359010.015785
[2025-02-26 17:40:50] 2025-02-26 16:40:30,349 | INFO     | intersect: -10581359010.015785
[2025-02-26 17:40:50] 2025-02-26 16:40:30,350 | INFO     | chi2: 2.333880835450545
[2025-02-26 17:40:50] 2025-02-26 16:40:30,350 | INFO     | current chi2=2.333880835450545 (change=51.098361825285565 %)
[2025-02-26 17:40:50] 2025-02-26 16:40:30,350 | INFO     | model: linear, x: [1740567550.0, 1740567611.0, 1740567672.0, 1740567733.0, 1740567794.0, 1740567855.0, 1740567916.0, 1740567977.0, 1740568038.0, 1740568099.0, 1740
[2025-02-26 17:40:50] 2025-02-26 16:40:30,350 | INFO     | sum of square deviations: 11762304260.0
[2025-02-26 17:40:50] 2025-02-26 16:40:30,353 | INFO     | sum of deviations: 9844496102.0
[2025-02-26 17:40:50] 2025-02-26 16:40:30,354 | INFO     | mean x: 1740577767.5
[2025-02-26 17:40:50] 2025-02-26 16:40:30,354 | INFO     | mean y: 2363228.470238095
[2025-02-26 17:40:50] 2025-02-26 16:40:30,354 | INFO     | -- intersect: -1454418594.9393878
[2025-02-26 17:40:50] 2025-02-26 16:40:30,354 | INFO     | intersect: -1454418594.9393878
[2025-02-26 17:40:50] 2025-02-26 16:40:30,354 | INFO     | chi2: 0.9248258961312901
[2025-02-26 17:40:50] 2025-02-26 16:40:30,354 | INFO     | current chi2=0.9248258961312901 (change=60.373902468214204 %)
[2025-02-26 17:40:50] 2025-02-26 16:40:30,355 | INFO     | model: linear, x: [1740567855.0, 1740567916.0, 1740567977.0, 1740568038.0, 1740568099.0, 1740568160.0, 1740568221.0, 1740568282.0, 1740568343.0, 1740568404.0, 1740
[2025-02-26 17:40:50] 2025-02-26 16:40:30,355 | INFO     | sum of square deviations: 11244973630.0
[2025-02-26 17:40:50] 2025-02-26 16:40:30,358 | INFO     | sum of deviations: -3334574638.000004
[2025-02-26 17:40:50] 2025-02-26 16:40:30,358 | INFO     | mean x: 1740577920.0
[2025-02-26 17:40:50] 2025-02-26 16:40:30,358 | INFO     | mean y: 2367088.897280967
[2025-02-26 17:40:50] 2025-02-26 16:40:30,358 | INFO     | -- intersect: 518516541.8413338
[2025-02-26 17:40:50] 2025-02-26 16:40:30,358 | INFO     | intersect: 518516541.8413338
[2025-02-26 17:40:50] 2025-02-26 16:40:30,359 | INFO     | chi2: 0.8347373452866846
[2025-02-26 17:40:50] 2025-02-26 16:40:30,359 | INFO     | current chi2=0.8347373452866846 (change=9.741136274563864 %)
[2025-02-26 17:40:50] 2025-02-26 16:40:30,359 | INFO     | left removable region: 30
[2025-02-26 17:40:50] 2025-02-26 16:40:30,359 | INFO     | model: linear, x: [1740568770.0, 1740568831.0, 1740568892.0, 1740568953.0, 1740569014.0, 1740569075.0, 1740569136.0, 1740569197.0, 1740569258.0, 1740569319.0, 1740
[2025-02-26 17:40:50] 2025-02-26 16:40:30,360 | INFO     | sum of square deviations: 9237596457.5
[2025-02-26 17:40:50] 2025-02-26 16:40:30,362 | INFO     | sum of deviations: 13839105990.0
[2025-02-26 17:40:50] 2025-02-26 16:40:30,362 | INFO     | mean x: 1740578194.5
[2025-02-26 17:40:50] 2025-02-26 16:40:30,362 | INFO     | mean y: 2374633.7419354836
[2025-02-26 17:40:50] 2025-02-26 16:40:30,363 | INFO     | -- intersect: -2605235065.208625
[2025-02-26 17:40:50] 2025-02-26 16:40:30,363 | INFO     | intersect: -2605235065.208625
[2025-02-26 17:40:50] 2025-02-26 16:40:30,363 | INFO     | chi2: 0.0016765455690991734
[2025-02-26 17:40:50] 2025-02-26 16:40:30,363 | INFO     | -- intersect: -2605235065.208625
[2025-02-26 17:40:50] 2025-02-26 16:40:30,363 | INFO     | current memory leak: 1.50 B/s (using 310 data points, chi2=0.00)
[2025-02-26 17:40:50] 2025-02-26 16:40:30,364 | INFO     | ..............................
[2025-02-26 17:40:50] 2025-02-26 16:40:30,364 | INFO     | . Timing measurements:
[2025-02-26 17:40:50] 2025-02-26 16:40:30,364 | INFO     | . get job = 0 s
[2025-02-26 17:40:50] 2025-02-26 16:40:30,364 | INFO     | . initial setup = 1 s
[2025-02-26 17:40:50] 2025-02-26 16:40:30,364 | INFO     | . payload setup = 8 s
[2025-02-26 17:40:50] 2025-02-26 16:40:30,364 | INFO     | . stage-in = 0 s
[2025-02-26 17:40:50] 2025-02-26 16:40:30,364 | INFO     | . payload execution = 21084 s
[2025-02-26 17:40:50] 2025-02-26 16:40:30,365 | INFO     | . stage-out = 1 s
[2025-02-26 17:40:50] 2025-02-26 16:40:30,365 | INFO     | . log creation = 0 s
[2025-02-26 17:40:50] 2025-02-26 16:40:30,365 | INFO     | ..............................
[2025-02-26 17:40:50] 2025-02-26 16:40:30,465 | INFO     | 
[2025-02-26 17:40:50] 2025-02-26 16:40:30,465 | INFO     | job summary report
[2025-02-26 17:40:50] 2025-02-26 16:40:30,465 | INFO     | --------------------------------------------------
[2025-02-26 17:40:50] 2025-02-26 16:40:30,466 | INFO     | PanDA job id: 6522973810
[2025-02-26 17:40:50] 2025-02-26 16:40:30,466 | INFO     | task id: 43205094
[2025-02-26 17:40:50] 2025-02-26 16:40:30,466 | INFO     | errors: (none)
[2025-02-26 17:40:50] 2025-02-26 16:40:30,466 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 17:40:50] 2025-02-26 16:40:30,466 | INFO     | pilot state: finished 
[2025-02-26 17:40:50] 2025-02-26 16:40:30,466 | INFO     | transexitcode: 0
[2025-02-26 17:40:50] 2025-02-26 16:40:30,466 | INFO     | exeerrorcode: 0
[2025-02-26 17:40:50] 2025-02-26 16:40:30,466 | INFO     | exeerrordiag: 
[2025-02-26 17:40:50] 2025-02-26 16:40:30,466 | INFO     | exitcode: 0
[2025-02-26 17:40:50] 2025-02-26 16:40:30,466 | INFO     | exitmsg: OK
[2025-02-26 17:40:50] 2025-02-26 16:40:30,466 | INFO     | cpuconsumptiontime: 80640 s
[2025-02-26 17:40:50] 2025-02-26 16:40:30,466 | INFO     | nevents: 400
[2025-02-26 17:40:50] 2025-02-26 16:40:30,466 | INFO     | neventsw: 0
[2025-02-26 17:40:50] 2025-02-26 16:40:30,466 | INFO     | pid: 1841342
[2025-02-26 17:40:50] 2025-02-26 16:40:30,467 | INFO     | pgrp: 1841342
[2025-02-26 17:40:50] 2025-02-26 16:40:30,467 | INFO     | corecount: 4
[2025-02-26 17:40:50] 2025-02-26 16:40:30,467 | INFO     | event service: False
[2025-02-26 17:40:50] 2025-02-26 16:40:30,467 | INFO     | sizes: {0: 2363729, 7: 2363935, 11: 2363963, 21094: 2397167, 21096: 2406130, 21097: 2406186, 21106: 2406484}
[2025-02-26 17:40:50] 2025-02-26 16:40:30,467 | INFO     | --------------------------------------------------
[2025-02-26 17:40:50] 2025-02-26 16:40:30,467 | INFO     | 
[2025-02-26 17:40:50] 2025-02-26 16:40:30,467 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-02-26 17:40:50] 2025-02-26 16:40:30,498 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 17:40:50] 2025-02-26 16:40:30,499 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 17:40:50] 2025-02-26 16:40:30,499 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 17:40:50] 2025-02-26 16:40:30,499 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 17:40:50] 2025-02-26 16:40:30,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 17:40:50] 2025-02-26 16:40:30,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 17:40:50] 2025-02-26 16:40:30,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 17:40:50] 2025-02-26 16:40:30,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 17:40:50] 2025-02-26 16:40:30,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 17:40:50] 2025-02-26 16:40:30,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 17:40:50] 2025-02-26 16:40:30,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 17:40:50] 2025-02-26 16:40:30,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 17:40:50] 2025-02-26 16:40:30,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 17:40:50] 2025-02-26 16:40:30,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 17:40:50] 2025-02-26 16:40:30,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 17:40:50] 2025-02-26 16:40:30,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 17:40:50] 2025-02-26 16:40:30,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 17:40:50] 2025-02-26 16:40:30,500 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 17:40:50] 2025-02-26 16:40:30,500 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 17:40:50] 2025-02-26 16:40:30,500 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 17:40:50] 2025-02-26 16:40:30,501 | INFO     | job 6522973810 has completed (purged errors)
[2025-02-26 17:40:50] 2025-02-26 16:40:30,501 | INFO     | overall cleanup function is called
[2025-02-26 17:40:50] 2025-02-26 16:40:31,509 | INFO     | --- collectZombieJob: --- 10, [1841342]
[2025-02-26 17:40:50] 2025-02-26 16:40:31,510 | INFO     | zombie collector waiting for pid 1841342
[2025-02-26 17:40:50] 2025-02-26 16:40:31,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 17:40:50] 2025-02-26 16:40:31,510 | INFO     | collected zombie processes
[2025-02-26 17:40:50] 2025-02-26 16:40:31,510 | INFO     | will attempt to kill all subprocesses of pid=1841342
[2025-02-26 17:40:50] 2025-02-26 16:40:31,811 | INFO     | process IDs to be killed: [1841342] (in reverse order)
[2025-02-26 17:40:50] 2025-02-26 16:40:32,070 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 17:40:50] 2025-02-26 16:40:32,070 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 17:40:50] 2025-02-26 16:40:32,097 | INFO     | did not find any defunct processes belonging to 1841342
[2025-02-26 17:40:50] 2025-02-26 16:40:32,119 | INFO     | did not find any defunct processes belonging to 1841342
[2025-02-26 17:40:50] 2025-02-26 16:40:32,119 | INFO     | ready for new job
[2025-02-26 17:40:50] 2025-02-26 16:40:32,119 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 17:40:50] 2025-02-26 16:40:32,122 | INFO     | **************************************
[2025-02-26 17:40:50] 2025-02-26 16:40:32,122 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 17:40:50] 2025-02-26 16:40:32,122 | INFO     | **************************************
[2025-02-26 17:40:50] 2025-02-26 16:40:32,122 | INFO     | 
[2025-02-26 17:40:50] 2025-02-26 16:40:32,134 | INFO     | architecture information:
[2025-02-26 17:40:50] 2025-02-26 16:40:32,135 | INFO     | executing command: cat /etc/os-release
[2025-02-26 17:40:50] 2025-02-26 16:40:32,157 | INFO     | cat /etc/os-release:
[2025-02-26 17:40:50] NAME="CentOS Linux"
[2025-02-26 17:40:50] VERSION="7 (Core)"
[2025-02-26 17:40:50] ID="centos"
[2025-02-26 17:40:50] ID_LIKE="rhel fedora"
[2025-02-26 17:40:50] VERSION_ID="7"
[2025-02-26 17:40:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 17:40:50] ANSI_COLOR="0;31"
[2025-02-26 17:40:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 17:40:50] HOME_URL="https://www.centos.org/"
[2025-02-26 17:40:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 17:40:50] 
[2025-02-26 17:40:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 17:40:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 17:40:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 17:40:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 17:40:50] 
[2025-02-26 17:40:50] 2025-02-26 16:40:32,158 | INFO     | **************************************
[2025-02-26 17:40:50] 2025-02-26 16:40:32,661 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-02-26 17:40:50] 2025-02-26 16:40:32,685 | INFO     | sufficient remaining disk space (3326594777088 B)
[2025-02-26 17:40:50] 2025-02-26 16:40:32,686 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 17:40:50] 2025-02-26 16:40:32,686 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 17:40:50] 2025-02-26 16:40:32,686 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 17:40:50] 2025-02-26 16:40:32,687 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 17:40:50] 2025-02-26 16:40:32,687 | INFO     | aborting loop
[2025-02-26 17:40:50] 2025-02-26 16:40:33,372 | INFO     | all data control threads have been joined
[2025-02-26 17:40:50] 2025-02-26 16:40:33,432 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 17:40:50] 2025-02-26 16:40:33,432 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 17:40:50] 2025-02-26 16:40:33,432 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 17:40:50] 2025-02-26 16:40:33,485 | INFO     | all payload control threads have been joined
[2025-02-26 17:40:50] 2025-02-26 16:40:33,691 | INFO     | [job] retrieve thread has finished
[2025-02-26 17:40:50] 2025-02-26 16:40:33,693 | INFO     | [job] job monitor thread has finished
[2025-02-26 17:40:50] 2025-02-26 16:40:33,773 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 17:40:50] 2025-02-26 16:40:34,130 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 17:40:50] 2025-02-26 16:40:34,277 | INFO     | all job control threads have been joined
[2025-02-26 17:40:50] 2025-02-26 16:40:34,354 | INFO     | [data] copytool_in thread has finished
[2025-02-26 17:40:50] 2025-02-26 16:40:34,378 | INFO     | [data] control thread has finished
[2025-02-26 17:40:50] 2025-02-26 16:40:34,449 | INFO     | [job] validate thread has finished
[2025-02-26 17:40:50] 2025-02-26 16:40:34,491 | INFO     | [payload] control thread has finished
[2025-02-26 17:40:50] 2025-02-26 16:40:34,654 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 17:40:50] 2025-02-26 16:40:35,013 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 17:40:50] 2025-02-26 16:40:35,131 | INFO     | [payload] failed_post thread has finished
[2025-02-26 17:40:50] 2025-02-26 16:40:35,228 | INFO     | [payload] validate_post thread has finished
[2025-02-26 17:40:50] 2025-02-26 16:40:35,282 | INFO     | [job] control thread has finished
[2025-02-26 17:40:50] 2025-02-26 16:40:35,476 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 17:40:50] 2025-02-26 16:40:35,779 | INFO     | [data] copytool_out thread has finished
[2025-02-26 17:40:50] 2025-02-26 16:40:36,479 | INFO     | [job] queue monitor thread has finished
[2025-02-26 17:40:50] 2025-02-26 16:40:36,692 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 17:40:50] 2025-02-26 16:40:42,891 | INFO     | job.realtimelogging is not enabled
[2025-02-26 17:40:50] 2025-02-26 16:40:43,893 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 17:40:50] 2025-02-26 16:40:44,516 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22626022647616)>', '<ExcThread(monitor, started 22625780713216)>']
[2025-02-26 17:40:50] 2025-02-26 16:40:45,491 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 17:40:50] 2025-02-26 16:40:45,491 | INFO     | [monitor] control thread has ended
[2025-02-26 17:40:50] 2025-02-26 16:40:49,527 | INFO     | all workflow threads have been joined
[2025-02-26 17:40:50] 2025-02-26 16:40:49,527 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 17:40:50] 2025-02-26 16:40:49,528 | INFO     | traces error code: 0
[2025-02-26 17:40:50] 2025-02-26 16:40:49,528 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 17:40:50] 2025-02-26 16:40:49,736 [wrapper] ==== pilot stdout END ====
[2025-02-26 17:40:50] 2025-02-26 16:40:49,740 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 17:40:50] 2025-02-26 16:40:49,744 [wrapper] pilotpid: 1833846
[2025-02-26 17:40:50] 2025-02-26 16:40:49,748 [wrapper] Pilot exit status: 0
[2025-02-26 17:40:50] 2025-02-26 16:40:49,763 [wrapper] pandaids: 6522973810
[2025-02-26 17:40:50] 2025-02-26 16:40:49,896 [wrapper] cleanup supervisor_pilot 3363567 1833847
[2025-02-26 17:40:50] 2025-02-26 16:40:49,899 [wrapper] Test setup, not cleaning
[2025-02-26 17:40:50] 2025-02-26 16:40:49,907 [wrapper] apfmon messages muted
[2025-02-26 17:40:50] 2025-02-26 16:40:49,911 [wrapper] ==== wrapper stdout END ====
[2025-02-26 17:40:50] 2025-02-26 16:40:49,914 [wrapper] ==== wrapper stderr END ====
[2025-02-26 17:40:50]  *** Error codes and diagnostics ***
[2025-02-26 17:40:50]     "exeErrorCode": 0,
[2025-02-26 17:40:50]     "exeErrorDiag": "",
[2025-02-26 17:40:50]     "pilotErrorCode": 0,
[2025-02-26 17:40:50]     "pilotErrorDiag": "",
[2025-02-26 17:40:50]  *** Listing of results directory ***
[2025-02-26 17:40:50] total 663384
[2025-02-26 17:40:50] -rw-r--r-- 1 boinc boinc    491065 Feb 22 13:02 pilot3.tar.gz
[2025-02-26 17:40:50] -rw-r--r-- 1 boinc boinc      5118 Feb 22 13:08 queuedata.json
[2025-02-26 17:40:50] -rwx------ 1 boinc boinc     35865 Feb 22 13:09 runpilot2-wrapper.sh
[2025-02-26 17:40:50] -rw-r--r-- 1 boinc boinc       100 Feb 26 11:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 17:40:50] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 11:48 run_atlas
[2025-02-26 17:40:50] -rw-r--r-- 1 boinc boinc       105 Feb 26 11:48 job.xml
[2025-02-26 17:40:50] -rw-r--r-- 2 boinc boinc 345180902 Feb 26 11:48 EVNT.43092757._001835.pool.root.1
[2025-02-26 17:40:50] -rw-r--r-- 1 boinc boinc      6677 Feb 26 11:48 init_data.xml
[2025-02-26 17:40:50] -rw-r--r-- 2 boinc boinc     17569 Feb 26 11:48 start_atlas.sh
[2025-02-26 17:40:50] drwxrwx--x 2 boinc boinc      4096 Feb 26 11:48 shared
[2025-02-26 17:40:50] -rw-r--r-- 2 boinc boinc    503556 Feb 26 11:48 input.tar.gz
[2025-02-26 17:40:50] -rw-r--r-- 1 boinc boinc         0 Feb 26 11:48 boinc_lockfile
[2025-02-26 17:40:50] -rw-r--r-- 1 boinc boinc      2547 Feb 26 11:48 pandaJob.out
[2025-02-26 17:40:50] -rw------- 1 boinc boinc       424 Feb 26 11:48 setup.sh.local
[2025-02-26 17:40:50] -rw------- 1 boinc boinc    990154 Feb 26 11:48 agis_schedconf.cvmfs.json
[2025-02-26 17:40:50] drwx------ 4 boinc boinc      4096 Feb 26 11:48 pilot3
[2025-02-26 17:40:50] -rw------- 1 boinc boinc 324841263 Feb 26 17:39 HITS.43205094._036258.pool.root.1
[2025-02-26 17:40:50] -rw-r--r-- 1 boinc boinc       532 Feb 26 17:39 boinc_task_state.xml
[2025-02-26 17:40:50] -rw------- 1 boinc boinc        95 Feb 26 17:40 pilot_heartbeat.json
[2025-02-26 17:40:50] -rw------- 1 boinc boinc      1025 Feb 26 17:40 memory_monitor_summary.json
[2025-02-26 17:40:50] -rw------- 1 boinc boinc   1569202 Feb 26 17:40 agis_ddmendpoints.agis.ALL.json
[2025-02-26 17:40:50] -rw-r--r-- 1 boinc boinc      8192 Feb 26 17:40 boinc_mmap_file
[2025-02-26 17:40:50] -rw-r--r-- 1 boinc boinc        28 Feb 26 17:40 wrapper_checkpoint.txt
[2025-02-26 17:40:50] -rw------- 1 boinc boinc    431049 Feb 26 17:40 log.43205094._036258.job.log.tgz.1
[2025-02-26 17:40:50] -rw------- 1 boinc boinc      7700 Feb 26 17:40 heartbeat.json
[2025-02-26 17:40:50] -rw------- 1 boinc boinc      4298 Feb 26 17:40 pilotlog.txt
[2025-02-26 17:40:50] -rw------- 1 boinc boinc   2310186 Feb 26 17:40 log.43205094._036258.job.log.1
[2025-02-26 17:40:50] -rw------- 1 boinc boinc       357 Feb 26 17:40 output.list
[2025-02-26 17:40:50] -rw-r--r-- 1 boinc boinc       620 Feb 26 17:40 runtime_log
[2025-02-26 17:40:50] -rw------- 1 boinc boinc   2764800 Feb 26 17:40 result.tar.gz
[2025-02-26 17:40:50] -rw-r--r-- 1 boinc boinc     11424 Feb 26 17:40 runtime_log.err
[2025-02-26 17:40:50] -rw------- 1 boinc boinc       666 Feb 26 17:40 9EvLDm5U356n9Rq4apOajLDm4fhM0noT9bVoFjIUDmVDeKDmqheWNn.diag
[2025-02-26 17:40:50] -rw-r--r-- 1 boinc boinc     21272 Feb 26 17:40 stderr.txt
[2025-02-26 17:40:50] HITS file was successfully produced:
[2025-02-26 17:40:50] -rw------- 1 boinc boinc 324841263 Feb 26 17:39 shared/HITS.pool.root.1
[2025-02-26 17:40:50]  *** Contents of shared directory: ***
[2025-02-26 17:40:50] total 657540
[2025-02-26 17:40:50] -rw-r--r-- 2 boinc boinc 345180902 Feb 26 11:48 ATLAS.root_0
[2025-02-26 17:40:50] -rw-r--r-- 2 boinc boinc     17569 Feb 26 11:48 start_atlas.sh
[2025-02-26 17:40:50] -rw-r--r-- 2 boinc boinc    503556 Feb 26 11:48 input.tar.gz
[2025-02-26 17:40:50] -rw------- 1 boinc boinc 324841263 Feb 26 17:39 HITS.pool.root.1
[2025-02-26 17:40:50] -rw------- 1 boinc boinc   2764800 Feb 26 17:40 result.tar.gz
17:40:51 (1829858): run_atlas exited; CPU time 80366.862134
17:40:51 (1829858): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN