Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:33:22 (1707774): wrapper (7.7.26015): starting
17:33:22 (1707774): wrapper: running run_atlas (--nthreads 4)
[2025-02-24 17:33:22] Arguments: --nthreads 4
[2025-02-24 17:33:22] Threads: 4
[2025-02-24 17:33:22] Checking for CVMFS
[2025-02-24 17:33:22] No cvmfs_config command found, will try listing directly
[2025-02-24 17:33:22] CVMFS is ok
[2025-02-24 17:33:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-24 17:33:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-24 17:33:22] Further information can be found at the LHC@home message board.
[2025-02-24 17:33:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-24 17:33:22] Checking for apptainer binary...
[2025-02-24 17:33:22] which: no apptainer in ((null))
[2025-02-24 17:33:22] apptainer is not installed, using version from CVMFS
[2025-02-24 17:33:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-24 17:33:23] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot72/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-02-24 17:33:23] apptainer works
[2025-02-24 17:33:23] Set ATHENA_PROC_NUMBER=4
[2025-02-24 17:33:23] Set ATHENA_CORE_NUMBER=4
[2025-02-24 17:33:23] Starting ATLAS job with PandaID=6522457951
[2025-02-24 17:33:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot72/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-24 23:23:28]  *** The last 200 lines of the pilot log: ***
[2025-02-24 23:23:28] 2025-02-24 22:21:42,244 | INFO     | -- intersect: -22398875346.604176
[2025-02-24 23:23:28] 2025-02-24 22:21:42,244 | INFO     | intersect: -22398875346.604176
[2025-02-24 23:23:28] 2025-02-24 22:21:42,245 | INFO     | chi2: 5.054377488915787
[2025-02-24 23:23:28] 2025-02-24 22:21:42,245 | INFO     | model: linear, x: [1740414850.0, 1740414911.0, 1740414972.0, 1740415033.0, 1740415094.0, 1740415155.0, 1740415216.0, 1740415277.0, 1740415338.0, 1740415399.0, 1740
[2025-02-24 23:23:28] 2025-02-24 22:21:42,254 | INFO     | sum of square deviations: 11867638328.0
[2025-02-24 23:23:28] 2025-02-24 22:21:42,257 | INFO     | sum of deviations: 178682138546.0
[2025-02-24 23:23:28] 2025-02-24 22:21:42,257 | INFO     | mean x: 1740425098.0
[2025-02-24 23:23:28] 2025-02-24 22:21:42,258 | INFO     | mean y: 2322619.492581602
[2025-02-24 23:23:28] 2025-02-24 22:21:42,258 | INFO     | -- intersect: -26201954077.754913
[2025-02-24 23:23:28] 2025-02-24 22:21:42,258 | INFO     | intersect: -26201954077.754913
[2025-02-24 23:23:28] 2025-02-24 22:21:42,258 | INFO     | chi2: 4.283739872953319
[2025-02-24 23:23:28] 2025-02-24 22:21:42,258 | INFO     | current chi2=4.283739872953319 (change=15.246934318864595 %)
[2025-02-24 23:23:28] 2025-02-24 22:21:42,258 | INFO     | right removable region: 336
[2025-02-24 23:23:28] 2025-02-24 22:21:42,259 | INFO     | model: linear, x: [1740415155.0, 1740415216.0, 1740415277.0, 1740415338.0, 1740415399.0, 1740415460.0, 1740415521.0, 1740415582.0, 1740415643.0, 1740415704.0, 1740
[2025-02-24 23:23:28] 2025-02-24 22:21:42,261 | INFO     | sum of square deviations: 11867638328.0
[2025-02-24 23:23:28] 2025-02-24 22:21:42,264 | INFO     | sum of deviations: 76409355423.99998
[2025-02-24 23:23:28] 2025-02-24 22:21:42,264 | INFO     | mean x: 1740425403.0
[2025-02-24 23:23:28] 2025-02-24 22:21:42,264 | INFO     | mean y: 2340918.3264094954
[2025-02-24 23:23:28] 2025-02-24 22:21:42,264 | INFO     | -- intersect: -11203324398.674932
[2025-02-24 23:23:28] 2025-02-24 22:21:42,265 | INFO     | intersect: -11203324398.674932
[2025-02-24 23:23:28] 2025-02-24 22:21:42,265 | INFO     | chi2: 2.458318555560233
[2025-02-24 23:23:28] 2025-02-24 22:21:42,265 | INFO     | current chi2=2.458318555560233 (change=51.362584987937524 %)
[2025-02-24 23:23:28] 2025-02-24 22:21:42,265 | INFO     | model: linear, x: [1740415460.0, 1740415521.0, 1740415582.0, 1740415643.0, 1740415704.0, 1740415765.0, 1740415826.0, 1740415887.0, 1740415948.0, 1740416009.0, 1740
[2025-02-24 23:23:28] 2025-02-24 22:21:42,266 | INFO     | sum of square deviations: 11347200663.0
[2025-02-24 23:23:28] 2025-02-24 22:21:42,269 | INFO     | sum of deviations: 9216029114.499996
[2025-02-24 23:23:28] 2025-02-24 22:21:42,269 | INFO     | mean x: 1740425555.5
[2025-02-24 23:23:28] 2025-02-24 22:21:42,269 | INFO     | mean y: 2360608.129518072
[2025-02-24 23:23:28] 2025-02-24 22:21:42,269 | INFO     | -- intersect: -1411187373.2161458
[2025-02-24 23:23:28] 2025-02-24 22:21:42,269 | INFO     | intersect: -1411187373.2161458
[2025-02-24 23:23:28] 2025-02-24 22:21:42,270 | INFO     | chi2: 0.900187030760834
[2025-02-24 23:23:28] 2025-02-24 22:21:42,270 | INFO     | current chi2=0.900187030760834 (change=63.382002355846524 %)
[2025-02-24 23:23:28] 2025-02-24 22:21:42,270 | INFO     | model: linear, x: [1740415765.0, 1740415826.0, 1740415887.0, 1740415948.0, 1740416009.0, 1740416070.0, 1740416131.0, 1740416192.0, 1740416253.0, 1740416314.0, 1740
[2025-02-24 23:23:28] 2025-02-24 22:21:42,270 | INFO     | sum of square deviations: 10842205148.0
[2025-02-24 23:23:28] 2025-02-24 22:21:42,273 | INFO     | sum of deviations: -4070752832.999996
[2025-02-24 23:23:28] 2025-02-24 22:21:42,273 | INFO     | mean x: 1740425708.0
[2025-02-24 23:23:28] 2025-02-24 22:21:42,273 | INFO     | mean y: 2364593.100917431
[2025-02-24 23:23:28] 2025-02-24 22:21:42,274 | INFO     | -- intersect: 655814955.3433185
[2025-02-24 23:23:28] 2025-02-24 22:21:42,274 | INFO     | intersect: 655814955.3433185
[2025-02-24 23:23:28] 2025-02-24 22:21:42,274 | INFO     | chi2: 0.799961474216942
[2025-02-24 23:23:28] 2025-02-24 22:21:42,274 | INFO     | current chi2=0.799961474216942 (change=11.133859200257728 %)
[2025-02-24 23:23:28] 2025-02-24 22:21:42,274 | INFO     | left removable region: 30
[2025-02-24 23:23:28] 2025-02-24 22:21:42,275 | INFO     | model: linear, x: [1740416680.0, 1740416741.0, 1740416802.0, 1740416863.0, 1740416924.0, 1740416985.0, 1740417046.0, 1740417107.0, 1740417168.0, 1740417229.0, 1740
[2025-02-24 23:23:28] 2025-02-24 22:21:42,275 | INFO     | sum of square deviations: 8884603792.5
[2025-02-24 23:23:28] 2025-02-24 22:21:42,278 | INFO     | sum of deviations: 12167062958.5
[2025-02-24 23:23:28] 2025-02-24 22:21:42,279 | INFO     | mean x: 1740425982.5
[2025-02-24 23:23:28] 2025-02-24 22:21:42,279 | INFO     | mean y: 2372305.5261437907
[2025-02-24 23:23:28] 2025-02-24 22:21:42,279 | INFO     | -- intersect: -2381062341.4484887
[2025-02-24 23:23:28] 2025-02-24 22:21:42,279 | INFO     | intersect: -2381062341.4484887
[2025-02-24 23:23:28] 2025-02-24 22:21:42,279 | INFO     | chi2: 0.0005546898008148979
[2025-02-24 23:23:28] 2025-02-24 22:21:42,279 | INFO     | -- intersect: -2381062341.4484887
[2025-02-24 23:23:28] 2025-02-24 22:21:42,280 | INFO     | current memory leak: 1.37 B/s (using 306 data points, chi2=0.00)
[2025-02-24 23:23:28] 2025-02-24 22:21:42,281 | INFO     | ..............................
[2025-02-24 23:23:28] 2025-02-24 22:21:42,281 | INFO     | . Timing measurements:
[2025-02-24 23:23:28] 2025-02-24 22:21:42,281 | INFO     | . get job = 0 s
[2025-02-24 23:23:28] 2025-02-24 22:21:42,281 | INFO     | . initial setup = 1 s
[2025-02-24 23:23:28] 2025-02-24 22:21:42,281 | INFO     | . payload setup = 8 s
[2025-02-24 23:23:28] 2025-02-24 22:21:42,281 | INFO     | . stage-in = 0 s
[2025-02-24 23:23:28] 2025-02-24 22:21:42,281 | INFO     | . payload execution = 20845 s
[2025-02-24 23:23:28] 2025-02-24 22:21:42,281 | INFO     | . stage-out = 1 s
[2025-02-24 23:23:28] 2025-02-24 22:21:42,281 | INFO     | . log creation = 0 s
[2025-02-24 23:23:28] 2025-02-24 22:21:42,282 | INFO     | ..............................
[2025-02-24 23:23:28] 2025-02-24 22:21:42,625 | WARNING  | process 1719687 can no longer be monitored (due to stat problems) - aborting
[2025-02-24 23:23:28] 2025-02-24 22:21:42,626 | INFO     | using path: /scratch/boinc/var/slot72/slots/0/PanDA_Pilot-6522457951/memory_monitor_summary.json (trf name=prmon)
[2025-02-24 23:23:28] 2025-02-24 22:21:42,870 | INFO     | 
[2025-02-24 23:23:28] 2025-02-24 22:21:42,871 | INFO     | job summary report
[2025-02-24 23:23:28] 2025-02-24 22:21:42,871 | INFO     | --------------------------------------------------
[2025-02-24 23:23:28] 2025-02-24 22:21:42,871 | INFO     | PanDA job id: 6522457951
[2025-02-24 23:23:28] 2025-02-24 22:21:42,871 | INFO     | task id: 43078919
[2025-02-24 23:23:28] 2025-02-24 22:21:42,871 | INFO     | errors: (none)
[2025-02-24 23:23:28] 2025-02-24 22:21:42,871 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-24 23:23:28] 2025-02-24 22:21:42,871 | INFO     | pilot state: finished 
[2025-02-24 23:23:28] 2025-02-24 22:21:42,871 | INFO     | transexitcode: 0
[2025-02-24 23:23:28] 2025-02-24 22:21:42,871 | INFO     | exeerrorcode: 0
[2025-02-24 23:23:28] 2025-02-24 22:21:42,871 | INFO     | exeerrordiag: 
[2025-02-24 23:23:28] 2025-02-24 22:21:42,872 | INFO     | exitcode: 0
[2025-02-24 23:23:28] 2025-02-24 22:21:42,872 | INFO     | exitmsg: OK
[2025-02-24 23:23:28] 2025-02-24 22:21:42,872 | INFO     | cpuconsumptiontime: 80817 s
[2025-02-24 23:23:28] 2025-02-24 22:21:42,872 | INFO     | nevents: 400
[2025-02-24 23:23:28] 2025-02-24 22:21:42,872 | INFO     | neventsw: 0
[2025-02-24 23:23:28] 2025-02-24 22:21:42,872 | INFO     | pid: 1719687
[2025-02-24 23:23:28] 2025-02-24 22:21:42,872 | INFO     | pgrp: 1719687
[2025-02-24 23:23:28] 2025-02-24 22:21:42,872 | INFO     | corecount: 4
[2025-02-24 23:23:28] 2025-02-24 22:21:42,872 | INFO     | event service: False
[2025-02-24 23:23:28] 2025-02-24 22:21:42,872 | INFO     | sizes: {0: 2383201, 1: 2383400, 8: 2383606, 12: 2383634, 20858: 2416690, 20861: 2425837, 20868: 2425951}
[2025-02-24 23:23:28] 2025-02-24 22:21:42,872 | INFO     | --------------------------------------------------
[2025-02-24 23:23:28] 2025-02-24 22:21:42,873 | INFO     | 
[2025-02-24 23:23:28] 2025-02-24 22:21:42,873 | INFO     | executing command: ls -lF /scratch/boinc/var/slot72/slots/0
[2025-02-24 23:23:28] 2025-02-24 22:21:42,905 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-24 23:23:28] 2025-02-24 22:21:42,906 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-24 23:23:28] 2025-02-24 22:21:42,906 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-24 23:23:28] 2025-02-24 22:21:42,906 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-24 23:23:28] 2025-02-24 22:21:42,906 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-24 23:23:28] 2025-02-24 22:21:42,906 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-24 23:23:28] 2025-02-24 22:21:42,906 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-24 23:23:28] 2025-02-24 22:21:42,907 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-24 23:23:28] 2025-02-24 22:21:42,907 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-24 23:23:28] 2025-02-24 22:21:42,907 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-24 23:23:28] 2025-02-24 22:21:42,907 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-24 23:23:28] 2025-02-24 22:21:42,907 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-24 23:23:28] 2025-02-24 22:21:42,907 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-24 23:23:28] 2025-02-24 22:21:42,907 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-24 23:23:28] 2025-02-24 22:21:42,907 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-24 23:23:28] 2025-02-24 22:21:42,907 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-24 23:23:28] 2025-02-24 22:21:42,907 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-24 23:23:28] 2025-02-24 22:21:42,907 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-24 23:23:28] 2025-02-24 22:21:42,907 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-24 23:23:28] 2025-02-24 22:21:42,908 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-24 23:23:28] 2025-02-24 22:21:42,908 | INFO     | job 6522457951 has completed (purged errors)
[2025-02-24 23:23:28] 2025-02-24 22:21:42,908 | INFO     | overall cleanup function is called
[2025-02-24 23:23:28] 2025-02-24 22:21:42,954 | INFO     | number of running child processes to parent process 1719687: 1
[2025-02-24 23:23:28] 2025-02-24 22:21:42,954 | INFO     | maximum number of monitored processes: 6
[2025-02-24 23:23:28] 2025-02-24 22:21:42,954 | INFO     | aborting job monitoring since job object (job id=6522457951) has expired
[2025-02-24 23:23:28] 2025-02-24 22:21:43,917 | INFO     | --- collectZombieJob: --- 10, [1719687]
[2025-02-24 23:23:28] 2025-02-24 22:21:43,918 | INFO     | zombie collector waiting for pid 1719687
[2025-02-24 23:23:28] 2025-02-24 22:21:43,918 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-24 23:23:28] 2025-02-24 22:21:43,918 | INFO     | collected zombie processes
[2025-02-24 23:23:28] 2025-02-24 22:21:43,918 | INFO     | will attempt to kill all subprocesses of pid=1719687
[2025-02-24 23:23:28] 2025-02-24 22:21:44,283 | INFO     | process IDs to be killed: [1719687] (in reverse order)
[2025-02-24 23:23:28] 2025-02-24 22:21:44,550 | WARNING  | found no corresponding commands to process id(s)
[2025-02-24 23:23:28] 2025-02-24 22:21:44,550 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-24 23:23:28] 2025-02-24 22:21:44,579 | INFO     | did not find any defunct processes belonging to 1719687
[2025-02-24 23:23:28] 2025-02-24 22:21:44,603 | INFO     | did not find any defunct processes belonging to 1719687
[2025-02-24 23:23:28] 2025-02-24 22:21:44,603 | INFO     | ready for new job
[2025-02-24 23:23:28] 2025-02-24 22:21:44,603 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-24 23:23:28] 2025-02-24 22:21:44,607 | INFO     | **************************************
[2025-02-24 23:23:28] 2025-02-24 22:21:44,607 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-24 23:23:28] 2025-02-24 22:21:44,607 | INFO     | **************************************
[2025-02-24 23:23:28] 2025-02-24 22:21:44,607 | INFO     | 
[2025-02-24 23:23:28] 2025-02-24 22:21:44,616 | INFO     | architecture information:
[2025-02-24 23:23:28] 2025-02-24 22:21:44,616 | INFO     | executing command: cat /etc/os-release
[2025-02-24 23:23:28] 2025-02-24 22:21:44,642 | INFO     | cat /etc/os-release:
[2025-02-24 23:23:28] NAME="CentOS Linux"
[2025-02-24 23:23:28] VERSION="7 (Core)"
[2025-02-24 23:23:28] ID="centos"
[2025-02-24 23:23:28] ID_LIKE="rhel fedora"
[2025-02-24 23:23:28] VERSION_ID="7"
[2025-02-24 23:23:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-24 23:23:28] ANSI_COLOR="0;31"
[2025-02-24 23:23:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-24 23:23:28] HOME_URL="https://www.centos.org/"
[2025-02-24 23:23:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-24 23:23:28] 
[2025-02-24 23:23:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-24 23:23:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-24 23:23:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-24 23:23:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-24 23:23:28] 
[2025-02-24 23:23:28] 2025-02-24 22:21:44,644 | INFO     | **************************************
[2025-02-24 23:23:28] 2025-02-24 22:21:45,148 | INFO     | executing command: df -mP /scratch/boinc/var/slot72/slots/0
[2025-02-24 23:23:28] 2025-02-24 22:21:45,176 | INFO     | sufficient remaining disk space (3232897171456 B)
[2025-02-24 23:23:28] 2025-02-24 22:21:45,176 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-24 23:23:28] 2025-02-24 22:21:45,176 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-24 23:23:28] 2025-02-24 22:21:45,457 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-24 23:23:28] 2025-02-24 22:21:45,457 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-24 23:23:28] 2025-02-24 22:21:45,457 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-24 23:23:28] 2025-02-24 22:21:45,457 | INFO     | will abort loop
[2025-02-24 23:23:28] 2025-02-24 22:21:45,603 | INFO     | all payload control threads have been joined
[2025-02-24 23:23:28] 2025-02-24 22:21:45,701 | INFO     | all data control threads have been joined
[2025-02-24 23:23:28] 2025-02-24 22:21:45,722 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-24 23:23:28] 2025-02-24 22:21:46,007 | INFO     | PID=1712110 has CPU usage=13.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-02-24 23:23:28] 2025-02-24 22:21:46,007 | INFO     | .. there are 19 such processes running
[2025-02-24 23:23:28] 2025-02-24 22:21:46,008 | INFO     | found 0 job(s) in 20 queues
[2025-02-24 23:23:28] 2025-02-24 22:21:46,008 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-24 23:23:28] 2025-02-24 22:21:46,008 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-24 23:23:28] 2025-02-24 22:21:46,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-24 23:23:28] 2025-02-24 22:21:46,182 | INFO     | [job] retrieve thread has finished
[2025-02-24 23:23:28] 2025-02-24 22:21:46,353 | INFO     | [payload] validate_post thread has finished
[2025-02-24 23:23:28] 2025-02-24 22:21:46,371 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-24 23:23:28] 2025-02-24 22:21:46,374 | INFO     | [job] create_data_payload thread has finished
[2025-02-24 23:23:28] 2025-02-24 22:21:46,437 | INFO     | all job control threads have been joined
[2025-02-24 23:23:28] 2025-02-24 22:21:46,463 | INFO     | [job] job monitor thread has finished
[2025-02-24 23:23:28] 2025-02-24 22:21:46,613 | INFO     | [payload] control thread has finished
[2025-02-24 23:23:28] 2025-02-24 22:21:46,706 | INFO     | [data] control thread has finished
[2025-02-24 23:23:28] 2025-02-24 22:21:46,991 | INFO     | [payload] execute_payloads thread has finished
[2025-02-24 23:23:28] 2025-02-24 22:21:47,276 | INFO     | [payload] failed_post thread has finished
[2025-02-24 23:23:28] 2025-02-24 22:21:47,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-24 23:23:28] 2025-02-24 22:21:47,438 | INFO     | [job] validate thread has finished
[2025-02-24 23:23:28] 2025-02-24 22:21:47,439 | INFO     | [data] copytool_in thread has finished
[2025-02-24 23:23:28] 2025-02-24 22:21:47,439 | INFO     | [payload] validate_pre thread has finished
[2025-02-24 23:23:28] 2025-02-24 22:21:47,442 | INFO     | [job] control thread has finished
[2025-02-24 23:23:28] 2025-02-24 22:21:47,728 | INFO     | [data] copytool_out thread has finished
[2025-02-24 23:23:28] 2025-02-24 22:21:48,406 | INFO     | [job] queue monitor thread has finished
[2025-02-24 23:23:28] 2025-02-24 22:21:50,025 | INFO     | [data] queue_monitor thread has finished
[2025-02-24 23:23:28] 2025-02-24 22:21:51,355 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22429258164032)>', '<ExcThread(monitor, started 22429017523968)>']
[2025-02-24 23:23:28] 2025-02-24 22:21:52,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-24 23:23:28] 2025-02-24 22:21:52,039 | INFO     | [monitor] control thread has ended
[2025-02-24 23:23:28] 2025-02-24 22:21:56,381 | INFO     | all workflow threads have been joined
[2025-02-24 23:23:28] 2025-02-24 22:21:56,381 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-24 23:23:28] 2025-02-24 22:21:56,381 | INFO     | traces error code: 0
[2025-02-24 23:23:28] 2025-02-24 22:21:56,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-24 23:23:28] 2025-02-24 22:21:56,595 [wrapper] ==== pilot stdout END ====
[2025-02-24 23:23:28] 2025-02-24 22:21:56,599 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-24 23:23:28] 2025-02-24 22:21:56,602 [wrapper] pilotpid: 1712110
[2025-02-24 23:23:28] 2025-02-24 22:21:56,605 [wrapper] Pilot exit status: 0
[2025-02-24 23:23:28] 2025-02-24 22:21:56,618 [wrapper] pandaids: 6522457951
[2025-02-24 23:23:28] 2025-02-24 22:21:56,771 [wrapper] cleanup supervisor_pilot 3045631 1712111
[2025-02-24 23:23:28] 2025-02-24 22:21:56,775 [wrapper] Test setup, not cleaning
[2025-02-24 23:23:28] 2025-02-24 22:21:56,782 [wrapper] apfmon messages muted
[2025-02-24 23:23:28] 2025-02-24 22:21:56,784 [wrapper] ==== wrapper stdout END ====
[2025-02-24 23:23:28] 2025-02-24 22:21:56,787 [wrapper] ==== wrapper stderr END ====
[2025-02-24 23:23:28]  *** Error codes and diagnostics ***
[2025-02-24 23:23:28]     "exeErrorCode": 0,
[2025-02-24 23:23:28]     "exeErrorDiag": "",
[2025-02-24 23:23:28]     "pilotErrorCode": 0,
[2025-02-24 23:23:28]     "pilotErrorDiag": "",
[2025-02-24 23:23:28]  *** Listing of results directory ***
[2025-02-24 23:23:28] total 662388
[2025-02-24 23:23:28] -rw-r--r-- 1 boinc boinc    491065 Feb 21 19:58 pilot3.tar.gz
[2025-02-24 23:23:28] -rw-r--r-- 1 boinc boinc      5118 Feb 21 20:04 queuedata.json
[2025-02-24 23:23:28] -rwx------ 1 boinc boinc     35865 Feb 21 20:07 runpilot2-wrapper.sh
[2025-02-24 23:23:28] -rw-r--r-- 1 boinc boinc       100 Feb 24 17:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-24 23:23:28] -rwxr-xr-x 1 boinc boinc      7986 Feb 24 17:33 run_atlas
[2025-02-24 23:23:28] -rw-r--r-- 1 boinc boinc       105 Feb 24 17:33 job.xml
[2025-02-24 23:23:28] -rw-r--r-- 1 boinc boinc      6677 Feb 24 17:33 init_data.xml
[2025-02-24 23:23:28] -rw-r--r-- 2 boinc boinc 344470214 Feb 24 17:33 EVNT.43078917._001930.pool.root.1
[2025-02-24 23:23:28] -rw-r--r-- 2 boinc boinc     17569 Feb 24 17:33 start_atlas.sh
[2025-02-24 23:23:28] drwxrwx--x 2 boinc boinc      4096 Feb 24 17:33 shared
[2025-02-24 23:23:28] -rw-r--r-- 2 boinc boinc    503561 Feb 24 17:33 input.tar.gz
[2025-02-24 23:23:28] -rw-r--r-- 1 boinc boinc         0 Feb 24 17:33 boinc_lockfile
[2025-02-24 23:23:28] -rw-r--r-- 1 boinc boinc      2546 Feb 24 17:33 pandaJob.out
[2025-02-24 23:23:28] -rw------- 1 boinc boinc       424 Feb 24 17:33 setup.sh.local
[2025-02-24 23:23:28] -rw------- 1 boinc boinc    987749 Feb 24 17:33 agis_schedconf.cvmfs.json
[2025-02-24 23:23:28] drwx------ 4 boinc boinc      4096 Feb 24 17:33 pilot3
[2025-02-24 23:23:28] -rw------- 1 boinc boinc 324696633 Feb 24 23:20 HITS.43078919._084848.pool.root.1
[2025-02-24 23:23:28] -rw-r--r-- 1 boinc boinc       529 Feb 24 23:20 boinc_task_state.xml
[2025-02-24 23:23:28] -rw------- 1 boinc boinc      1032 Feb 24 23:21 memory_monitor_summary.json
[2025-02-24 23:23:28] -rw------- 1 boinc boinc   1582569 Feb 24 23:21 agis_ddmendpoints.agis.ALL.json
[2025-02-24 23:23:28] -rw------- 1 boinc boinc    424367 Feb 24 23:21 log.43078919._084848.job.log.tgz.1
[2025-02-24 23:23:28] -rw------- 1 boinc boinc      7703 Feb 24 23:21 heartbeat.json
[2025-02-24 23:23:28] -rw------- 1 boinc boinc        95 Feb 24 23:21 pilot_heartbeat.json
[2025-02-24 23:23:28] -rw------- 1 boinc boinc      4808 Feb 24 23:21 pilotlog.txt
[2025-02-24 23:23:28] -rw------- 1 boinc boinc   2229054 Feb 24 23:21 log.43078919._084848.job.log.1
[2025-02-24 23:23:28] -rw------- 1 boinc boinc       357 Feb 24 23:21 output.list
[2025-02-24 23:23:28] -rw-r--r-- 1 boinc boinc       620 Feb 24 23:21 runtime_log
[2025-02-24 23:23:28] -rw------- 1 boinc boinc   2672640 Feb 24 23:21 result.tar.gz
[2025-02-24 23:23:28] -rw-r--r-- 1 boinc boinc     11424 Feb 24 23:21 runtime_log.err
[2025-02-24 23:23:28] -rw------- 1 boinc boinc       667 Feb 24 23:21 UJdKDmPYn56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmWrsKDmw3cP7m.diag
[2025-02-24 23:23:28] -rw-r--r-- 1 boinc boinc        27 Feb 24 23:23 wrapper_checkpoint.txt
[2025-02-24 23:23:28] -rw-r--r-- 1 boinc boinc      8192 Feb 24 23:23 boinc_mmap_file
[2025-02-24 23:23:28] -rw-r--r-- 1 boinc boinc     21527 Feb 24 23:23 stderr.txt
[2025-02-24 23:23:28] HITS file was successfully produced:
[2025-02-24 23:23:28] -rw------- 1 boinc boinc 324696633 Feb 24 23:20 shared/HITS.pool.root.1
[2025-02-24 23:23:28]  *** Contents of shared directory: ***
[2025-02-24 23:23:28] total 656620
[2025-02-24 23:23:28] -rw-r--r-- 2 boinc boinc 344470214 Feb 24 17:33 ATLAS.root_0
[2025-02-24 23:23:28] -rw-r--r-- 2 boinc boinc     17569 Feb 24 17:33 start_atlas.sh
[2025-02-24 23:23:28] -rw-r--r-- 2 boinc boinc    503561 Feb 24 17:33 input.tar.gz
[2025-02-24 23:23:28] -rw------- 1 boinc boinc 324696633 Feb 24 23:20 HITS.pool.root.1
[2025-02-24 23:23:28] -rw------- 1 boinc boinc   2672640 Feb 24 23:21 result.tar.gz
23:23:29 (1707774): run_atlas exited; CPU time 80438.118011
23:23:29 (1707774): called boinc_finish(0)

</stderr_txt>
]]>

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