Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:26:39 (3778841): wrapper (7.7.26015): starting
17:26:39 (3778841): wrapper: running run_atlas (--nthreads 10)
[2025-02-21 17:26:39] Arguments: --nthreads 10
[2025-02-21 17:26:39] Threads: 10
[2025-02-21 17:26:39] Checking for CVMFS
[2025-02-21 17:26:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-21 17:26:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-21 17:26:39] Running cvmfs_config stat atlas.cern.ch
[2025-02-21 17:26:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-21 17:26:39] 2.11.5.0 743315 22618 190512 142918 3 422 28059824 37641217 21267 130560 0 3292243 99.125 7714187 29481 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-21 17:26:39] CVMFS is ok
[2025-02-21 17:26:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-21 17:26:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-21 17:26:39] Further information can be found at the LHC@home message board.
[2025-02-21 17:26:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-21 17:26:39] Checking for apptainer binary...
[2025-02-21 17:26:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-21 17:26:39] Running /usr/bin/apptainer --version
[2025-02-21 17:26:39] apptainer version 1.3.6-1.el9
[2025-02-21 17:26:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-21 17:26:39] c-5-2.aglt2.org
[2025-02-21 17:26:39] apptainer works
[2025-02-21 17:26:39] Set ATHENA_PROC_NUMBER=10
[2025-02-21 17:26:39] Set ATHENA_CORE_NUMBER=10
[2025-02-21 17:26:39] Starting ATLAS job with PandaID=6522331414
[2025-02-21 17:26:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 02:07:39]  *** The last 200 lines of the pilot log: ***
[2025-02-22 02:07:39] 2025-02-22 07:07:23,896 | INFO     | sum of deviations: 377625896420.4879
[2025-02-22 02:07:39] 2025-02-22 07:07:23,897 | INFO     | mean x: 1740192275.102564
[2025-02-22 02:07:39] 2025-02-22 07:07:23,897 | INFO     | mean y: 2394954.1637080866
[2025-02-22 02:07:39] 2025-02-22 07:07:23,897 | INFO     | -- intersect: -16259173071.397837
[2025-02-22 02:07:39] 2025-02-22 07:07:23,897 | INFO     | intersect: -16259173071.397837
[2025-02-22 02:07:39] 2025-02-22 07:07:23,898 | INFO     | chi2: 5.0574120825238955
[2025-02-22 02:07:39] 2025-02-22 07:07:23,898 | INFO     | current chi2=5.0574120825238955 (change=11.824349625506454 %)
[2025-02-22 02:07:39] 2025-02-22 07:07:23,898 | INFO     | right removable region: 506
[2025-02-22 02:07:39] 2025-02-22 07:07:23,899 | INFO     | model: linear, x: [1740177147.0, 1740177208.0, 1740177269.0, 1740177330.0, 1740177391.0, 1740177452.0, 1740177513.0, 1740177574.0, 1740177635.0, 1740177696.0, 1740
[2025-02-22 02:07:39] 2025-02-22 07:07:23,899 | INFO     | sum of square deviations: 40410688008.66662
[2025-02-22 02:07:39] 2025-02-22 07:07:23,907 | INFO     | sum of deviations: 220409307028.28226
[2025-02-22 02:07:39] 2025-02-22 07:07:23,907 | INFO     | mean x: 1740192580.102564
[2025-02-22 02:07:39] 2025-02-22 07:07:23,907 | INFO     | mean y: 2407723.7830374753
[2025-02-22 02:07:39] 2025-02-22 07:07:23,907 | INFO     | -- intersect: -9489008027.265455
[2025-02-22 02:07:39] 2025-02-22 07:07:23,907 | INFO     | intersect: -9489008027.265455
[2025-02-22 02:07:39] 2025-02-22 07:07:23,908 | INFO     | chi2: 3.1564290037007807
[2025-02-22 02:07:39] 2025-02-22 07:07:23,908 | INFO     | current chi2=3.1564290037007807 (change=44.96786583320383 %)
[2025-02-22 02:07:39] 2025-02-22 07:07:23,909 | INFO     | model: linear, x: [1740177452.0, 1740177513.0, 1740177574.0, 1740177635.0, 1740177696.0, 1740177757.0, 1740177818.0, 1740177879.0, 1740177940.0, 1740178001.0, 1740
[2025-02-22 02:07:39] 2025-02-22 07:07:23,909 | INFO     | sum of square deviations: 39226826696.11346
[2025-02-22 02:07:39] 2025-02-22 07:07:23,916 | INFO     | sum of deviations: 121609568825.72734
[2025-02-22 02:07:39] 2025-02-22 07:07:23,916 | INFO     | mean x: 1740192732.6035857
[2025-02-22 02:07:39] 2025-02-22 07:07:23,916 | INFO     | mean y: 2420452.707171315
[2025-02-22 02:07:39] 2025-02-22 07:07:23,916 | INFO     | -- intersect: -5392461206.342597
[2025-02-22 02:07:39] 2025-02-22 07:07:23,917 | INFO     | intersect: -5392461206.342597
[2025-02-22 02:07:39] 2025-02-22 07:07:23,917 | INFO     | chi2: 1.7597901303441472
[2025-02-22 02:07:39] 2025-02-22 07:07:23,917 | INFO     | current chi2=1.7597901303441472 (change=44.24743505141833 %)
[2025-02-22 02:07:39] 2025-02-22 07:07:23,918 | INFO     | model: linear, x: [1740177757.0, 1740177818.0, 1740177879.0, 1740177940.0, 1740178001.0, 1740178062.0, 1740178123.0, 1740178184.0, 1740178245.0, 1740178309.0, 1740
[2025-02-22 02:07:39] 2025-02-22 07:07:23,918 | INFO     | sum of square deviations: 38066314658.55935
[2025-02-22 02:07:39] 2025-02-22 07:07:23,924 | INFO     | sum of deviations: 52708243996.8149
[2025-02-22 02:07:39] 2025-02-22 07:07:23,924 | INFO     | mean x: 1740192885.1046278
[2025-02-22 02:07:39] 2025-02-22 07:07:23,925 | INFO     | mean y: 2429485.0804828973
[2025-02-22 02:07:39] 2025-02-22 07:07:23,925 | INFO     | -- intersect: -2407115857.3655286
[2025-02-22 02:07:39] 2025-02-22 07:07:23,925 | INFO     | intersect: -2407115857.3655286
[2025-02-22 02:07:39] 2025-02-22 07:07:23,926 | INFO     | chi2: 0.9511461221990472
[2025-02-22 02:07:39] 2025-02-22 07:07:23,926 | INFO     | current chi2=0.9511461221990472 (change=45.95116168693141 %)
[2025-02-22 02:07:39] 2025-02-22 07:07:23,926 | INFO     | model: linear, x: [1740178062.0, 1740178123.0, 1740178184.0, 1740178245.0, 1740178309.0, 1740178367.0, 1740178428.0, 1740178490.0, 1740178550.0, 1740178611.0, 1740
[2025-02-22 02:07:39] 2025-02-22 07:07:23,927 | INFO     | sum of square deviations: 36928919333.50431
[2025-02-22 02:07:39] 2025-02-22 07:07:23,933 | INFO     | sum of deviations: 39988328631.03252
[2025-02-22 02:07:39] 2025-02-22 07:07:23,933 | INFO     | mean x: 1740193037.605691
[2025-02-22 02:07:39] 2025-02-22 07:07:23,933 | INFO     | mean y: 2431179.8455284555
[2025-02-22 02:07:39] 2025-02-22 07:07:23,934 | INFO     | -- intersect: -1881929703.8502173
[2025-02-22 02:07:39] 2025-02-22 07:07:23,934 | INFO     | intersect: -1881929703.8502173
[2025-02-22 02:07:39] 2025-02-22 07:07:23,934 | INFO     | chi2: 0.8941757451605363
[2025-02-22 02:07:39] 2025-02-22 07:07:23,935 | INFO     | current chi2=0.8941757451605363 (change=5.98965560694244 %)
[2025-02-22 02:07:39] 2025-02-22 07:07:23,935 | INFO     | left removable region: 40
[2025-02-22 02:07:39] 2025-02-22 07:07:23,935 | INFO     | model: linear, x: [1740179282.0, 1740179343.0, 1740179405.0, 1740179466.0, 1740179527.0, 1740179587.0, 1740179649.0, 1740179709.0, 1740179770.0, 1740179832.0, 1740
[2025-02-22 02:07:39] 2025-02-22 07:07:23,936 | INFO     | sum of square deviations: 31378295723.759632
[2025-02-22 02:07:39] 2025-02-22 07:07:23,941 | INFO     | sum of deviations: 105489329972.90982
[2025-02-22 02:07:39] 2025-02-22 07:07:23,941 | INFO     | mean x: 1740193464.6008584
[2025-02-22 02:07:39] 2025-02-22 07:07:23,941 | INFO     | mean y: 2430325.2253218885
[2025-02-22 02:07:39] 2025-02-22 07:07:23,942 | INFO     | -- intersect: -5847850525.591589
[2025-02-22 02:07:39] 2025-02-22 07:07:23,942 | INFO     | intersect: -5847850525.591589
[2025-02-22 02:07:39] 2025-02-22 07:07:23,942 | INFO     | chi2: 0.09658168728955578
[2025-02-22 02:07:39] 2025-02-22 07:07:23,943 | INFO     | -- intersect: -5847850525.591589
[2025-02-22 02:07:39] 2025-02-22 07:07:23,943 | INFO     | current memory leak: 3.36 B/s (using 466 data points, chi2=0.10)
[2025-02-22 02:07:39] 2025-02-22 07:07:23,944 | INFO     | ..............................
[2025-02-22 02:07:39] 2025-02-22 07:07:23,944 | INFO     | . Timing measurements:
[2025-02-22 02:07:39] 2025-02-22 07:07:23,944 | INFO     | . get job = 0 s
[2025-02-22 02:07:39] 2025-02-22 07:07:23,944 | INFO     | . initial setup = 4 s
[2025-02-22 02:07:39] 2025-02-22 07:07:23,944 | INFO     | . payload setup = 6 s
[2025-02-22 02:07:39] 2025-02-22 07:07:23,944 | INFO     | . stage-in = 0 s
[2025-02-22 02:07:39] 2025-02-22 07:07:23,944 | INFO     | . payload execution = 31190 s
[2025-02-22 02:07:39] 2025-02-22 07:07:23,944 | INFO     | . stage-out = 3 s
[2025-02-22 02:07:39] 2025-02-22 07:07:23,945 | INFO     | . log creation = 0 s
[2025-02-22 02:07:39] 2025-02-22 07:07:23,945 | INFO     | ..............................
[2025-02-22 02:07:39] 2025-02-22 07:07:24,564 | INFO     | 
[2025-02-22 02:07:39] 2025-02-22 07:07:24,568 | INFO     | job summary report
[2025-02-22 02:07:39] 2025-02-22 07:07:24,568 | INFO     | --------------------------------------------------
[2025-02-22 02:07:39] 2025-02-22 07:07:24,568 | INFO     | PanDA job id: 6522331414
[2025-02-22 02:07:39] 2025-02-22 07:07:24,568 | INFO     | task id: 43205094
[2025-02-22 02:07:39] 2025-02-22 07:07:24,568 | INFO     | errors: (none)
[2025-02-22 02:07:39] 2025-02-22 07:07:24,568 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 02:07:39] 2025-02-22 07:07:24,569 | INFO     | pilot state: finished 
[2025-02-22 02:07:39] 2025-02-22 07:07:24,569 | INFO     | transexitcode: 0
[2025-02-22 02:07:39] 2025-02-22 07:07:24,569 | INFO     | exeerrorcode: 0
[2025-02-22 02:07:39] 2025-02-22 07:07:24,569 | INFO     | exeerrordiag: 
[2025-02-22 02:07:39] 2025-02-22 07:07:24,569 | INFO     | exitcode: 0
[2025-02-22 02:07:39] 2025-02-22 07:07:24,569 | INFO     | exitmsg: OK
[2025-02-22 02:07:39] 2025-02-22 07:07:24,569 | INFO     | cpuconsumptiontime: 108013 s
[2025-02-22 02:07:39] 2025-02-22 07:07:24,569 | INFO     | nevents: 400
[2025-02-22 02:07:39] 2025-02-22 07:07:24,569 | INFO     | neventsw: 0
[2025-02-22 02:07:39] 2025-02-22 07:07:24,569 | INFO     | pid: 3794117
[2025-02-22 02:07:39] 2025-02-22 07:07:24,570 | INFO     | pgrp: 3794117
[2025-02-22 02:07:39] 2025-02-22 07:07:24,570 | INFO     | corecount: 10
[2025-02-22 02:07:39] 2025-02-22 07:07:24,570 | INFO     | event service: False
[2025-02-22 02:07:39] 2025-02-22 07:07:24,570 | INFO     | sizes: {0: 2383381, 5: 2383587, 11: 2383615, 31202: 2421446, 31205: 2430387, 31208: 2430443, 31214: 2430741}
[2025-02-22 02:07:39] 2025-02-22 07:07:24,570 | INFO     | --------------------------------------------------
[2025-02-22 02:07:39] 2025-02-22 07:07:24,570 | INFO     | 
[2025-02-22 02:07:39] 2025-02-22 07:07:24,570 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-22 02:07:39] 2025-02-22 07:07:24,592 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 02:07:39] 2025-02-22 07:07:24,592 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 02:07:39] 2025-02-22 07:07:24,593 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 02:07:39] 2025-02-22 07:07:24,593 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 02:07:39] 2025-02-22 07:07:24,593 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 02:07:39] 2025-02-22 07:07:24,593 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 02:07:39] 2025-02-22 07:07:24,593 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 02:07:39] 2025-02-22 07:07:24,593 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 02:07:39] 2025-02-22 07:07:24,593 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 02:07:39] 2025-02-22 07:07:24,593 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 02:07:39] 2025-02-22 07:07:24,594 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 02:07:39] 2025-02-22 07:07:24,594 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 02:07:39] 2025-02-22 07:07:24,594 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 02:07:39] 2025-02-22 07:07:24,594 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 02:07:39] 2025-02-22 07:07:24,594 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 02:07:39] 2025-02-22 07:07:24,594 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 02:07:39] 2025-02-22 07:07:24,594 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 02:07:39] 2025-02-22 07:07:24,594 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 02:07:39] 2025-02-22 07:07:24,595 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 02:07:39] 2025-02-22 07:07:24,595 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 02:07:39] 2025-02-22 07:07:24,595 | INFO     | job 6522331414 has completed (purged errors)
[2025-02-22 02:07:39] 2025-02-22 07:07:24,595 | INFO     | overall cleanup function is called
[2025-02-22 02:07:39] 2025-02-22 07:07:25,606 | INFO     | --- collectZombieJob: --- 10, [3794117]
[2025-02-22 02:07:39] 2025-02-22 07:07:25,606 | INFO     | zombie collector waiting for pid 3794117
[2025-02-22 02:07:39] 2025-02-22 07:07:25,607 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 02:07:39] 2025-02-22 07:07:25,607 | INFO     | collected zombie processes
[2025-02-22 02:07:39] 2025-02-22 07:07:25,607 | INFO     | will attempt to kill all subprocesses of pid=3794117
[2025-02-22 02:07:39] 2025-02-22 07:07:25,722 | INFO     | PID=3785006 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-02-22 02:07:39] 2025-02-22 07:07:25,722 | INFO     | .. there are 28 such processes running
[2025-02-22 02:07:39] 2025-02-22 07:07:25,866 | INFO     | process IDs to be killed: [3794117] (in reverse order)
[2025-02-22 02:07:39] 2025-02-22 07:07:25,975 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 02:07:39] 2025-02-22 07:07:25,976 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 02:07:39] 2025-02-22 07:07:25,989 | INFO     | did not find any defunct processes belonging to 3794117
[2025-02-22 02:07:39] 2025-02-22 07:07:26,002 | INFO     | did not find any defunct processes belonging to 3794117
[2025-02-22 02:07:39] 2025-02-22 07:07:26,002 | INFO     | ready for new job
[2025-02-22 02:07:39] 2025-02-22 07:07:26,003 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 02:07:39] 2025-02-22 07:07:26,005 | INFO     | **************************************
[2025-02-22 02:07:39] 2025-02-22 07:07:26,005 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 02:07:39] 2025-02-22 07:07:26,005 | INFO     | **************************************
[2025-02-22 02:07:39] 2025-02-22 07:07:26,005 | INFO     | 
[2025-02-22 02:07:39] 2025-02-22 07:07:26,020 | INFO     | architecture information:
[2025-02-22 02:07:39] 2025-02-22 07:07:26,020 | INFO     | executing command: cat /etc/os-release
[2025-02-22 02:07:39] 2025-02-22 07:07:26,034 | INFO     | cat /etc/os-release:
[2025-02-22 02:07:39] NAME="CentOS Linux"
[2025-02-22 02:07:39] VERSION="7 (Core)"
[2025-02-22 02:07:39] ID="centos"
[2025-02-22 02:07:39] ID_LIKE="rhel fedora"
[2025-02-22 02:07:39] VERSION_ID="7"
[2025-02-22 02:07:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 02:07:39] ANSI_COLOR="0;31"
[2025-02-22 02:07:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 02:07:39] HOME_URL="https://www.centos.org/"
[2025-02-22 02:07:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 02:07:39] 
[2025-02-22 02:07:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 02:07:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 02:07:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 02:07:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 02:07:39] 
[2025-02-22 02:07:39] 2025-02-22 07:07:26,034 | INFO     | **************************************
[2025-02-22 02:07:39] 2025-02-22 07:07:26,540 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-22 02:07:39] 2025-02-22 07:07:26,557 | INFO     | sufficient remaining disk space (75174510592 B)
[2025-02-22 02:07:39] 2025-02-22 07:07:26,558 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 02:07:39] 2025-02-22 07:07:26,558 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 02:07:39] 2025-02-22 07:07:26,558 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 02:07:39] 2025-02-22 07:07:26,559 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-22 02:07:39] 2025-02-22 07:07:26,559 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 02:07:39] 2025-02-22 07:07:26,559 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 02:07:39] 2025-02-22 07:07:26,559 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 02:07:39] 2025-02-22 07:07:26,722 | INFO     | all payload control threads have been joined
[2025-02-22 02:07:39] 2025-02-22 07:07:26,831 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-22 02:07:39] 2025-02-22 07:07:26,832 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-22 02:07:39] 2025-02-22 07:07:26,832 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 02:07:39] 2025-02-22 07:07:26,832 | INFO     | will abort loop
[2025-02-22 02:07:39] 2025-02-22 07:07:26,967 | INFO     | all data control threads have been joined
[2025-02-22 02:07:39] 2025-02-22 07:07:27,563 | INFO     | [job] retrieve thread has finished
[2025-02-22 02:07:39] 2025-02-22 07:07:27,727 | INFO     | [payload] control thread has finished
[2025-02-22 02:07:39] 2025-02-22 07:07:27,838 | INFO     | [job] job monitor thread has finished
[2025-02-22 02:07:39] 2025-02-22 07:07:27,942 | INFO     | [payload] validate_post thread has finished
[2025-02-22 02:07:39] 2025-02-22 07:07:27,943 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 02:07:39] 2025-02-22 07:07:27,974 | INFO     | [data] control thread has finished
[2025-02-22 02:07:39] 2025-02-22 07:07:28,046 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 02:07:39] 2025-02-22 07:07:28,051 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 02:07:39] 2025-02-22 07:07:28,088 | INFO     | all job control threads have been joined
[2025-02-22 02:07:39] 2025-02-22 07:07:28,166 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 02:07:39] 2025-02-22 07:07:28,536 | INFO     | [payload] failed_post thread has finished
[2025-02-22 02:07:39] 2025-02-22 07:07:28,568 | INFO     | [data] copytool_out thread has finished
[2025-02-22 02:07:39] 2025-02-22 07:07:28,639 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 02:07:39] 2025-02-22 07:07:28,670 | INFO     | [data] copytool_in thread has finished
[2025-02-22 02:07:39] 2025-02-22 07:07:28,726 | INFO     | [job] validate thread has finished
[2025-02-22 02:07:39] 2025-02-22 07:07:29,104 | INFO     | [job] control thread has finished
[2025-02-22 02:07:39] 2025-02-22 07:07:29,131 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 02:07:39] 2025-02-22 07:07:30,136 | INFO     | [job] queue monitor thread has finished
[2025-02-22 02:07:39] 2025-02-22 07:07:32,175 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 02:07:39] 2025-02-22 07:07:33,909 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140497285863232)>', '<ExcThread(monitor, started 140496785610496)>']
[2025-02-22 02:07:39] 2025-02-22 07:07:34,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 02:07:39] 2025-02-22 07:07:34,622 | INFO     | [monitor] control thread has ended
[2025-02-22 02:07:39] 2025-02-22 07:07:38,934 | INFO     | all workflow threads have been joined
[2025-02-22 02:07:39] 2025-02-22 07:07:38,934 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 02:07:39] 2025-02-22 07:07:38,935 | INFO     | traces error code: 0
[2025-02-22 02:07:39] 2025-02-22 07:07:38,935 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 02:07:39] 2025-02-22 07:07:39,403 [wrapper] ==== pilot stdout END ====
[2025-02-22 02:07:39] 2025-02-22 07:07:39,406 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 02:07:39] 2025-02-22 07:07:39,409 [wrapper] pilotpid: 3785006
[2025-02-22 02:07:39] 2025-02-22 07:07:39,411 [wrapper] Pilot exit status: 0
[2025-02-22 02:07:39] 2025-02-22 07:07:39,424 [wrapper] pandaids: 6522331414
[2025-02-22 02:07:39] 2025-02-22 07:07:39,489 [wrapper] cleanup supervisor_pilot 2297390 3785007
[2025-02-22 02:07:39] 2025-02-22 07:07:39,493 [wrapper] Test setup, not cleaning
[2025-02-22 02:07:39] 2025-02-22 07:07:39,499 [wrapper] apfmon messages muted
[2025-02-22 02:07:39] 2025-02-22 07:07:39,502 [wrapper] ==== wrapper stdout END ====
[2025-02-22 02:07:39] 2025-02-22 07:07:39,505 [wrapper] ==== wrapper stderr END ====
[2025-02-22 02:07:39]  *** Error codes and diagnostics ***
[2025-02-22 02:07:39]     "exeErrorCode": 0,
[2025-02-22 02:07:39]     "exeErrorDiag": "",
[2025-02-22 02:07:39]     "pilotErrorCode": 0,
[2025-02-22 02:07:39]     "pilotErrorDiag": "",
[2025-02-22 02:07:39]  *** Listing of results directory ***
[2025-02-22 02:07:39] total 660360
[2025-02-22 02:07:39] -rw-r--r--. 1 boincer umatlas      5118 Feb 21 08:35 queuedata.json
[2025-02-22 02:07:39] -rwx------. 1 boincer umatlas     35865 Feb 21 08:36 runpilot2-wrapper.sh
[2025-02-22 02:07:39] -rw-r--r--. 1 boincer umatlas    491065 Feb 21 08:36 pilot3.tar.gz
[2025-02-22 02:07:39] -rw-r--r--. 1 boincer umatlas       100 Feb 21 17:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 02:07:39] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 21 17:26 run_atlas
[2025-02-22 02:07:39] -rw-r--r--. 1 boincer umatlas       105 Feb 21 17:26 job.xml
[2025-02-22 02:07:39] -rw-r--r--. 2 boincer umatlas 344836759 Feb 21 17:26 EVNT.43092757._001276.pool.root.1
[2025-02-22 02:07:39] -rw-r--r--. 2 boincer umatlas     17569 Feb 21 17:26 start_atlas.sh
[2025-02-22 02:07:39] drwxrwx--x. 2 boincer umatlas      4096 Feb 21 17:26 shared
[2025-02-22 02:07:39] -rw-r--r--. 2 boincer umatlas    503556 Feb 21 17:26 input.tar.gz
[2025-02-22 02:07:39] -rw-r--r--. 1 boincer umatlas         0 Feb 21 17:26 boinc_lockfile
[2025-02-22 02:07:39] -rw-r--r--. 1 boincer umatlas      2544 Feb 21 17:26 pandaJob.out
[2025-02-22 02:07:39] -rw-------. 1 boincer umatlas       467 Feb 21 17:26 setup.sh.local
[2025-02-22 02:07:39] -rw-------. 1 boincer umatlas    987673 Feb 21 17:26 agis_schedconf.cvmfs.json
[2025-02-22 02:07:39] drwx------. 4 boincer umatlas      4096 Feb 21 17:26 pilot3
[2025-02-22 02:07:39] -rw-r--r--. 1 boincer umatlas      6675 Feb 22 02:04 init_data.xml
[2025-02-22 02:07:39] -rw-------. 1 boincer umatlas 318965815 Feb 22 02:06 HITS.43205094._032247.pool.root.1
[2025-02-22 02:07:39] -rw-r--r--. 1 boincer umatlas       532 Feb 22 02:06 boinc_task_state.xml
[2025-02-22 02:07:39] -rw-------. 1 boincer umatlas        95 Feb 22 02:06 pilot_heartbeat.json
[2025-02-22 02:07:39] -rw-------. 1 boincer umatlas      1065 Feb 22 02:07 memory_monitor_summary.json
[2025-02-22 02:07:39] -rw-------. 1 boincer umatlas   1582569 Feb 22 02:07 agis_ddmendpoints.agis.ALL.json
[2025-02-22 02:07:39] -rw-------. 1 boincer umatlas    670662 Feb 22 02:07 log.43205094._032247.job.log.tgz.1
[2025-02-22 02:07:39] -rw-------. 1 boincer umatlas      7773 Feb 22 02:07 heartbeat.json
[2025-02-22 02:07:39] -rw-------. 1 boincer umatlas      4524 Feb 22 02:07 pilotlog.txt
[2025-02-22 02:07:39] -rw-r--r--. 1 boincer umatlas      8192 Feb 22 02:07 boinc_mmap_file
[2025-02-22 02:07:39] -rw-------. 1 boincer umatlas   3631665 Feb 22 02:07 log.43205094._032247.job.log.1
[2025-02-22 02:07:39] -rw-------. 1 boincer umatlas       357 Feb 22 02:07 output.list
[2025-02-22 02:07:39] -rw-r--r--. 1 boincer umatlas       620 Feb 22 02:07 runtime_log
[2025-02-22 02:07:39] -rw-------. 1 boincer umatlas   4321280 Feb 22 02:07 result.tar.gz
[2025-02-22 02:07:39] -rw-r--r--. 1 boincer umatlas        29 Feb 22 02:07 wrapper_checkpoint.txt
[2025-02-22 02:07:39] -rw-r--r--. 1 boincer umatlas     11406 Feb 22 02:07 runtime_log.err
[2025-02-22 02:07:39] -rw-------. 1 boincer umatlas       662 Feb 22 02:07 EleMDmsNi56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmmRdKDmVyVIsn.diag
[2025-02-22 02:07:39] -rw-r--r--. 1 boincer umatlas     21688 Feb 22 02:07 stderr.txt
[2025-02-22 02:07:39] HITS file was successfully produced:
[2025-02-22 02:07:39] -rw-------. 1 boincer umatlas 318965815 Feb 22 02:06 shared/HITS.pool.root.1
[2025-02-22 02:07:39]  *** Contents of shared directory: ***
[2025-02-22 02:07:39] total 652984
[2025-02-22 02:07:39] -rw-r--r--. 2 boincer umatlas 344836759 Feb 21 17:26 ATLAS.root_0
[2025-02-22 02:07:39] -rw-r--r--. 2 boincer umatlas     17569 Feb 21 17:26 start_atlas.sh
[2025-02-22 02:07:39] -rw-r--r--. 2 boincer umatlas    503556 Feb 21 17:26 input.tar.gz
[2025-02-22 02:07:39] -rw-------. 1 boincer umatlas 318965815 Feb 22 02:06 HITS.pool.root.1
[2025-02-22 02:07:39] -rw-------. 1 boincer umatlas   4321280 Feb 22 02:07 result.tar.gz
02:08:01 (3778841): run_atlas exited; CPU time 107622.707458
02:08:01 (3778841): called boinc_finish(0)

</stderr_txt>
]]>

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